Structure

Physi-Chem Properties

Molecular Weight:  344.09
Volume:  334.655
LogP:  3.234
LogD:  2.762
LogS:  -3.933
# Rotatable Bonds:  4
TPSA:  98.36
# H-Bond Aceptor:  7
# H-Bond Donor:  2
# Rings:  3
# Heavy Atoms:  7

MedChem Properties

QED Drug-Likeness Score:  0.751
Synthetic Accessibility Score:  2.357
Fsp3:  0.167
Lipinski Rule-of-5:  Accepted
Pfizer Rule:  Accepted
GSK Rule:  Accepted
BMS Rule:  0
Golden Triangle Rule:  Accepted
Chelating Alert:  1
PAINS Alert:  0

ADMET Properties (ADMETlab2.0)

ADMET: Absorption

Caco-2 Permeability:  -4.827
MDCK Permeability:  1.9595214325818233e-05
Pgp-inhibitor:  0.988
Pgp-substrate:  0.001
Human Intestinal Absorption (HIA):  0.018
20% Bioavailability (F20%):  0.003
30% Bioavailability (F30%):  0.007

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB):  0.009
Plasma Protein Binding (PPB):  89.98681640625%
Volume Distribution (VD):  0.779
Pgp-substrate:  12.05643081665039%

ADMET: Metabolism

CYP1A2-inhibitor:  0.955
CYP1A2-substrate:  0.961
CYP2C19-inhibitor:  0.702
CYP2C19-substrate:  0.093
CYP2C9-inhibitor:  0.733
CYP2C9-substrate:  0.912
CYP2D6-inhibitor:  0.607
CYP2D6-substrate:  0.899
CYP3A4-inhibitor:  0.679
CYP3A4-substrate:  0.239

ADMET: Excretion

Clearance (CL):  5.55
Half-life (T1/2):  0.763

ADMET: Toxicity

hERG Blockers:  0.026
Human Hepatotoxicity (H-HT):  0.157
Drug-inuced Liver Injury (DILI):  0.969
AMES Toxicity:  0.589
Rat Oral Acute Toxicity:  0.14
Maximum Recommended Daily Dose:  0.326
Skin Sensitization:  0.262
Carcinogencity:  0.034
Eye Corrosion:  0.004
Eye Irritation:  0.868
Respiratory Toxicity:  0.303

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General Info & Identifiers & Properties  
Structure MOL file  
Source Organisms  
Biological Activities  
Similar NPs/Drugs  

  Natural Product: NPC270620

Natural Product ID:  NPC270620
Common Name*:   Ayanin
IUPAC Name:   5-hydroxy-2-(3-hydroxy-4-methoxyphenyl)-3,7-dimethoxychromen-4-one
Synonyms:   Ayanin
Standard InCHIKey:  KPCRYSMUMBNTCK-UHFFFAOYSA-N
Standard InCHI:  InChI=1S/C18H16O7/c1-22-10-7-12(20)15-14(8-10)25-17(18(24-3)16(15)21)9-4-5-13(23-2)11(19)6-9/h4-8,19-20H,1-3H3
SMILES:  COc1cc(O)c2c(c1)oc(c(c2=O)OC)c1ccc(c(c1)O)OC
Synthetic Gene Cluster:   n.a.
ChEMBL Identifier:   CHEMBL74898
PubChem CID:   5280682
Chemical Classification**:  
  • CHEMONTID:0000000 [Organic compounds]
    • [CHEMONTID:0000261] Phenylpropanoids and polyketides
      • [CHEMONTID:0000334] Flavonoids
        • [CHEMONTID:0002585] O-methylated flavonoids
          • [CHEMONTID:0002592] 7-O-methylated flavonoids

*Note: the InCHIKey will be temporarily assigned as the "Common Name" if no IUPAC name or alternative short name is available.
**Note: the Chemical Classification was calculated by NPClassifier Version 1.5. Reference: PMID:34662515.

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO15454 Vitex rotundifolia Species Lamiaceae Eukaryota Fruits n.a. n.a. PMID[10579867]
NPO15454 Vitex rotundifolia Species Lamiaceae Eukaryota subterranean part n.a. n.a. PMID[11374949]
NPO15454 Vitex rotundifolia Species Lamiaceae Eukaryota n.a. fruit n.a. PMID[11536386]
NPO20244 Melicope semecarpifolia Species Rutaceae Eukaryota n.a. n.a. n.a. PMID[11575945]
NPO28450 Phyllanthus emblica Species Phyllanthaceae Eukaryota n.a. n.a. n.a. PMID[11754604]
NPO15454 Vitex rotundifolia Species Lamiaceae Eukaryota fruits n.a. n.a. PMID[11975496]
NPO11059 Callicarpa japonica Species Lamiaceae Eukaryota n.a. leaf n.a. PMID[12165300]
NPO22842 Lissoclinum bistratum Species Didemnidae Eukaryota n.a. n.a. n.a. PMID[12608858]
NPO23263 Crinum yemense Species Amaryllidaceae Eukaryota n.a. n.a. n.a. PMID[15270564]
NPO23510 Vicia faba Species Fabaceae Eukaryota flowers n.a. n.a. PMID[16180811]
NPO19240 Ligularia cymbulifera Species Asteraceae Eukaryota Roots n.a. n.a. PMID[16643057]
NPO8080 Sarcophyton elegans Species Alcyoniidae Eukaryota n.a. n.a. n.a. PMID[18004813]
NPO20244 Melicope semecarpifolia Species Rutaceae Eukaryota n.a. n.a. n.a. PMID[18163582]
NPO28450 Phyllanthus emblica Species Phyllanthaceae Eukaryota Roots Simao city, Yunnan Province, China 2007-MAY PMID[19374435]
NPO19832 Gambierdiscus toxicus Species Goniodomataceae Eukaryota n.a. n.a. n.a. PMID[21250701]
NPO29806 Euodia elleryana Species Rutaceae Eukaryota n.a. n.a. n.a. PMID[21275386]
NPO242 Calycopteris floribunda Species Combretaceae Eukaryota n.a. n.a. n.a. PMID[21275386]
NPO9888 Lobophytum laevigatum Species Alcyoniidae Eukaryota n.a. Vietnamese n.a. PMID[21458279]
NPO9888 Lobophytum laevigatum Species Alcyoniidae Eukaryota n.a. Vietnamese soft coral n.a. PMID[21507644]
NPO23510 Vicia faba Species Fabaceae Eukaryota n.a. n.a. n.a. PMID[22014228]
NPO23510 Vicia faba Species Fabaceae Eukaryota n.a. branch n.a. PMID[22014228]
NPO23510 Vicia faba Species Fabaceae Eukaryota n.a. leaf n.a. PMID[22014228]
NPO15454 Vitex rotundifolia Species Lamiaceae Eukaryota fruits n.a. n.a. PMID[24035341]
NPO22842 Lissoclinum bistratum Species Didemnidae Eukaryota n.a. n.a. n.a. PMID[7807120]
NPO11059 Callicarpa japonica Species Lamiaceae Eukaryota n.a. n.a. n.a. PMID[9222055]
NPO27951 Vigna mungo Species Fabaceae Eukaryota Sprout Seedling n.a. n.a. Database[FooDB]
NPO23510 Vicia faba Species Fabaceae Eukaryota Sprout Seedling n.a. n.a. Database[FooDB]
NPO23510 Vicia faba Species Fabaceae Eukaryota Stem n.a. n.a. Database[FooDB]
NPO23510 Vicia faba Species Fabaceae Eukaryota n.a. n.a. Database[FooDB]
NPO27951 Vigna mungo Species Fabaceae Eukaryota n.a. n.a. Database[FooDB]
NPO18599 Pangium edule Species Achariaceae Eukaryota n.a. n.a. Database[FooDB]
NPO1351 Artemisia vulgaris Species Asteraceae Eukaryota Flower n.a. n.a. Database[FooDB]
NPO23510 Vicia faba Species Fabaceae Eukaryota Flower n.a. n.a. Database[FooDB]
NPO23510 Vicia faba Species Fabaceae Eukaryota Fruit n.a. n.a. Database[FooDB]
NPO1351 Artemisia vulgaris Species Asteraceae Eukaryota Leaf n.a. n.a. Database[FooDB]
NPO27951 Vigna mungo Species Fabaceae Eukaryota Leaf Diffusate n.a. n.a. Database[FooDB]
NPO23510 Vicia faba Species Fabaceae Eukaryota Oil n.a. n.a. Database[FooDB]
NPO1351 Artemisia vulgaris Species Asteraceae Eukaryota Plant n.a. n.a. Database[FooDB]
NPO1351 Artemisia vulgaris Species Asteraceae Eukaryota Root n.a. n.a. Database[FooDB]
NPO27951 Vigna mungo Species Fabaceae Eukaryota Seed n.a. n.a. Database[FooDB]
NPO23510 Vicia faba Species Fabaceae Eukaryota Seed n.a. n.a. Database[FooDB]
NPO21600 Aconitum variegatum Species Ranunculaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO15454 Vitex rotundifolia Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO28450 Phyllanthus emblica Species Phyllanthaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO1351 Artemisia vulgaris Species Asteraceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO22186 Baileya pauciradiata Species Asteraceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO15786 Umbilicaria esculenta Species Umbilicariaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO17584 Crataegus maximowiczii Species Rosaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO20244 Melicope semecarpifolia Species Rutaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO23510 Vicia faba Species Fabaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO22500 Stephania dielsiana Species Menispermaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO14715 Trollius chinensis Species Ranunculaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO16978 Entada phaseoloides Species Fabaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO22683 Pteris bella Species Pteridaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO21600 Aconitum variegatum Species Ranunculaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO1351 Artemisia vulgaris Species Asteraceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO17266 Hedychium yunnanense Species Zingiberaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO23107 Adiantum monochlamys Species Pteridaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO15454 Vitex rotundifolia Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO15786 Umbilicaria esculenta Species Umbilicariaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO22186 Baileya pauciradiata Species Asteraceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO20244 Melicope semecarpifolia Species Rutaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO17584 Crataegus maximowiczii Species Rosaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO14715 Trollius chinensis Species Ranunculaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO23510 Vicia faba Species Fabaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO242 Calycopteris floribunda Species Combretaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO11059 Callicarpa japonica Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO28450 Phyllanthus emblica Species Phyllanthaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO22500 Stephania dielsiana Species Menispermaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO22636 Sterculia foetida Species Malvaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO24496 Gymnopetalum integrifolium Species Cucurbitaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO17749 Jackiella javanica Species Jackiellaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO16978 Entada phaseoloides Species Fabaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO23510 Vicia faba Species Fabaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO1351 Artemisia vulgaris Species Asteraceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO22636 Sterculia foetida Species Malvaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO28450 Phyllanthus emblica Species Phyllanthaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO21600 Aconitum variegatum Species Ranunculaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO22186 Baileya pauciradiata Species Asteraceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO16978 Entada phaseoloides Species Fabaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO17030 Calvatia lilacina Species Lycoperdaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO28450 Phyllanthus emblica Species Phyllanthaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO15454 Vitex rotundifolia Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO26532 Gmelina asiatica Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18672 Senecio adenophyllus Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO17894 Rhus vulgaris Species Anacardiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18260 Eremanthus seidelii Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO21344 Fadogia agrestis Species Rubiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO11059 Callicarpa japonica Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19240 Ligularia cymbulifera Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO13182 Achillea wilhelmsii Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO17373.1 Cunninghamia lanceolata var. konishii Varieties Cupressaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19571 Oreopteris quelpaertensis Species Thelypteridaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO23562 Pachyphragma macrophyllum Species Brassicaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO15966 Sassafras officinalis Species Lauraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO13344 Helichrysum cephaloideum Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO15454 Vitex rotundifolia Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO3711 Acalypha australis Species Euphorbiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO23427 Becium grandiflorum n.a. n.a. n.a. n.a. n.a. n.a. Database[UNPD]
NPO12873 Tessaria absinthioides Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18839 Lilium umbellatum Species Liliaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO16132 Bryum argenteum Species Bryaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO21660 Magnolia montana Species Magnoliaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO22186 Baileya pauciradiata Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO6943 Vernonanthura chamaedrys Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO16776 Euphorbia amygdaloides Species Euphorbiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18599 Pangium edule Species Achariaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18422 Stizolobium deeringianum n.a. n.a. n.a. n.a. n.a. n.a. Database[UNPD]
NPO12860 Clione antarctica Species Clionidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18041 Cladrastis platycarpa Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO17707 Dioscorea villosa Species Dioscoreaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO14715 Trollius chinensis Species Ranunculaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19631 Aphis pini Species Aphididae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO23695 Setosphaeria turcica Species Pleosporaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18231 Rhagoletis cerasi Species Tephritidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO8080 Sarcophyton elegans Species Alcyoniidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO17490 Trichophyton mentagrophytes Species Arthrodermataceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19706 Polyzonium rosalbum Species Polyzoniidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO13727 Hemionitis japonica Species Pteridaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO24576 Genista lydia Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO17030 Calvatia lilacina Species Lycoperdaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO3990 Acacia salicina Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18163 Aulosira fertilissima Species Fortieaceae Bacteria n.a. n.a. n.a. Database[UNPD]
NPO22636 Sterculia foetida Species Malvaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO11083 Avrainvillea longicaulis Species Udoteaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO10438 Tanacetum nubigenum Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO17266 Hedychium yunnanense Species Zingiberaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18031 Russula vesca Species Russulaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO23300 Trichilia heudelotii Species Meliaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO9888 Lobophytum laevigatum Species Alcyoniidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO14214 Sedum obtuso-lineare Species Crassulaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO15437 Aspergillus desertorum Species Aspergillaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19168 Solidago flexicaulis Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO22500 Stephania dielsiana Species Menispermaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO21600 Aconitum variegatum Species Ranunculaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO6746 Blighia welwitschii Species Sapindaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18925 Artemisia rehan Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO2591 Io fluvialis Species Pleuroceridae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO21534 Ostrya carpinifolia Species Betulaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO23510 Vicia faba Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO24014 Scapania bolanderi Species Scapaniaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20857 Commiphora erythraea Species Burseraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25120 Vincetoxicum forrestii Species Apocynaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO24139 Calamus strictus Species Sparidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO17350 Jatropha macrorhiza Species Euphorbiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO9524 Kalanchoe blossfeldiana Species Crassulaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO24184 Argyrochosma pilifera Species Pteridaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO24496 Gymnopetalum integrifolium Species Cucurbitaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20584 Cheilanthes fragrans Species Pteridaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20244 Melicope semecarpifolia Species Rutaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO23263 Crinum yemense Species Amaryllidaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO17222 Hesperis matronalis Species Brassicaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19086 Nematolepis phebalioides Species Rutaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18884 Apuleia leiocarpa Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO16978 Entada phaseoloides Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO16377 Juniperus ashei Species Cupressaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19832 Gambierdiscus toxicus Species Goniodomataceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19370 Coprosma areolata Species Rubiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO13731 Centaurea webbiana Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO14249 Diplodia natalensis Species Botryosphaeriaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO16316 Cylindrospermum muscicola Species 0stocaceae Bacteria n.a. n.a. n.a. Database[UNPD]
NPO19306 Cortinarius orellanus Species Cortinariaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO22683 Pteris bella Species Pteridaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO27951 Vigna mungo Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO15481 Hypericum balearicum Species Hypericaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO1351 Artemisia vulgaris Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19010 Elephantopus hirtiflorus Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18768 Haliclona tubifera Species Chalinidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO23426 Andromeda polifolia Species Ericaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO3446 Acanthaster planci Species Acanthasteridae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO15786 Umbilicaria esculenta Species Umbilicariaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO23648 Spilanthes mauritiana Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO2354 Rhizobium leguminosarum Species Rhizobiaceae Bacteria n.a. n.a. n.a. Database[UNPD]
NPO23107 Adiantum monochlamys Species Pteridaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO16254 Backhousia angustifolia Species Myrtaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO4499 Aglaia formosana Species Meliaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO22842 Lissoclinum bistratum Species Didemnidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO13008 Methanobrevibacter arboriphilus Species Methanobacteriaceae Archaea n.a. n.a. n.a. Database[UNPD]
NPO17749 Jackiella javanica Species Jackiellaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19766 Viguiera linearis Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18345 Phora velutina Species Phoridae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO28450 Phyllanthus emblica Species Phyllanthaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO15119 Aphis graminum Species Aphididae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO17584 Crataegus maximowiczii Species Rosaceae Eukaryota n.a. n.a. n.a. Database[UNPD]

☑ Note for Reference:
In addition to directly collecting NP source organism data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated them from below databases:
UNPD: Universal Natural Products Database [PMID: 23638153].
StreptomeDB: a database of streptomycetes natural products [PMID: 33051671].
TM-MC: a database of medicinal materials and chemical compounds in Northeast Asian traditional medicine [PMID: 26156871].
TCM@Taiwan: a Traditional Chinese Medicine database [PMID: 21253603].
TCMID: a Traditional Chinese Medicine database [PMID: 29106634].
TCMSP: The traditional Chinese medicine systems pharmacology database and analysis platform [PMID: 24735618].
HerDing: a herb recommendation system to treat diseases using genes and chemicals [PMID: 26980517].
MetaboLights: a metabolomics database [PMID: 27010336].
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  NP Quantity Composition/Concentration

Organism ID NP ID Organism Material Preparation Organism Part NP Quantity (Standard) NP Quantity (Minimum) NP Quantity (Maximum) Quantity Unit Reference

☑ Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP quantitative records for specific NP domains (e.g., NPS from foods or herbs) from domain-specific databases. These databases include:
DUKE: Dr. Duke's Phytochemical and Ethnobotanical Databases.
PHENOL EXPLORER: is the first comprehensive database on polyphenol content in foods [PMID: 24103452], its homepage can be accessed at here.
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT517 Cell Line Panel NCI-60 (60 carcinoma cell lines) Homo sapiens GI50 = 32000.0 nM PMID[484302]
NPT91 Cell Line KB Homo sapiens Activity = 3.0 % PMID[484304]
NPT1422 Individual Protein ATP-binding cassette sub-family G member 2 Homo sapiens IC50 = 460.0 nM PMID[484305]
NPT1422 Individual Protein ATP-binding cassette sub-family G member 2 Homo sapiens IC50 = 680.0 nM PMID[484305]
NPT1594 Individual Protein Multidrug resistance-associated protein 1 Homo sapiens IC50 = 50000.0 nM PMID[484305]
NPT1422 Individual Protein ATP-binding cassette sub-family G member 2 Homo sapiens IC50 = 5700.0 nM PMID[484306]
NPT520 Cell Line 3T3-L1 Mus musculus Activity = 18.5 % PMID[484307]
NPT520 Cell Line 3T3-L1 Mus musculus Activity = 16.3 % PMID[484307]
NPT520 Cell Line 3T3-L1 Mus musculus Activity = 2.6 % PMID[484307]
NPT520 Cell Line 3T3-L1 Mus musculus Activity = 0.4 % PMID[484307]
NPT367 Cell Line MDA-N Homo sapiens GI50 n.a. 73113.91 nM PMID[484308]
NPT368 Cell Line SN12C Homo sapiens GI50 n.a. 61944.11 nM PMID[484308]
NPT370 Cell Line NCI-H23 Homo sapiens GI50 n.a. 69502.43 nM PMID[484308]
NPT369 Cell Line ACHN Homo sapiens GI50 n.a. 33113.11 nM PMID[484308]
NPT371 Cell Line UO-31 Homo sapiens GI50 n.a. 28906.8 nM PMID[484308]
NPT116 Cell Line HL-60 Homo sapiens GI50 n.a. 100000.0 nM PMID[484308]
NPT90 Cell Line DU-145 Homo sapiens GI50 n.a. 20044.72 nM PMID[484308]
NPT374 Cell Line SF-539 Homo sapiens GI50 n.a. 18407.72 nM PMID[484308]
NPT375 Cell Line Malme-3M Homo sapiens GI50 n.a. 23988.33 nM PMID[484308]
NPT373 Cell Line SK-MEL-5 Homo sapiens GI50 n.a. 20417.38 nM PMID[484308]
NPT111 Cell Line K562 Homo sapiens GI50 n.a. 60534.09 nM PMID[484308]
NPT376 Cell Line A498 Homo sapiens GI50 n.a. 3443.5 nM PMID[484308]
NPT377 Cell Line OVCAR-3 Homo sapiens GI50 n.a. 63826.35 nM PMID[484308]
NPT379 Cell Line HOP-62 Homo sapiens GI50 n.a. 31477.48 nM PMID[484308]
NPT112 Cell Line MOLT-4 Homo sapiens GI50 n.a. 42657.95 nM PMID[484308]
NPT378 Cell Line NCI/ADR-RES Homo sapiens GI50 n.a. 100000.0 nM PMID[484308]
NPT380 Cell Line U-251 Homo sapiens GI50 n.a. 100000.0 nM PMID[484308]
NPT381 Cell Line OVCAR-8 Homo sapiens GI50 n.a. 66527.32 nM PMID[484308]
NPT382 Cell Line OVCAR-5 Homo sapiens GI50 n.a. 37411.06 nM PMID[484308]
NPT383 Cell Line SNB-19 Homo sapiens GI50 n.a. 100000.0 nM PMID[484308]
NPT385 Cell Line SR Homo sapiens GI50 n.a. 22130.95 nM PMID[484308]
NPT82 Cell Line MDA-MB-231 Homo sapiens GI50 n.a. 14757.07 nM PMID[484308]
NPT384 Cell Line TK-10 Homo sapiens GI50 n.a. 17579.24 nM PMID[484308]
NPT323 Cell Line SW-620 Homo sapiens GI50 n.a. 100000.0 nM PMID[484308]
NPT386 Cell Line KM12 Homo sapiens GI50 n.a. 35727.28 nM PMID[484308]
NPT455 Cell Line NCI-H522 Homo sapiens GI50 n.a. 29107.17 nM PMID[484308]
NPT387 Cell Line M14 Homo sapiens GI50 n.a. 52239.62 nM PMID[484308]
NPT388 Cell Line NCI-H322M Homo sapiens GI50 n.a. 38018.94 nM PMID[484308]
NPT389 Cell Line RPMI-8226 Homo sapiens GI50 n.a. 33113.11 nM PMID[484308]
NPT456 Cell Line OVCAR-4 Homo sapiens GI50 n.a. 22130.95 nM PMID[484308]
NPT457 Cell Line BT-549 Homo sapiens GI50 n.a. 20370.42 nM PMID[484308]
NPT390 Cell Line LOX IMVI Homo sapiens GI50 n.a. 20701.41 nM PMID[484308]
NPT147 Cell Line SK-MEL-2 Homo sapiens GI50 n.a. 100000.0 nM PMID[484308]
NPT81 Cell Line A549 Homo sapiens GI50 n.a. 76559.66 nM PMID[484308]
NPT392 Cell Line SNB-75 Homo sapiens GI50 n.a. 6137.62 nM PMID[484308]
NPT391 Cell Line HCC 2998 Homo sapiens GI50 n.a. 28248.8 nM PMID[484308]
NPT148 Cell Line HCT-15 Homo sapiens GI50 n.a. 14256.08 nM PMID[484308]
NPT393 Cell Line HCT-116 Homo sapiens GI50 n.a. 32062.69 nM PMID[484308]
NPT395 Cell Line SF-268 Homo sapiens GI50 n.a. 33189.45 nM PMID[484308]
NPT83 Cell Line MCF7 Homo sapiens GI50 n.a. 15452.54 nM PMID[484308]
NPT394 Cell Line EKVX Homo sapiens GI50 n.a. 62517.27 nM PMID[484308]
NPT306 Cell Line PC-3 Homo sapiens GI50 n.a. 30831.88 nM PMID[484308]
NPT396 Cell Line T47D Homo sapiens GI50 n.a. 3828.25 nM PMID[484308]
NPT146 Cell Line SK-OV-3 Homo sapiens GI50 n.a. 35727.28 nM PMID[484308]
NPT398 Cell Line UACC-62 Homo sapiens GI50 n.a. 23496.33 nM PMID[484308]
NPT397 Cell Line NCI-H460 Homo sapiens GI50 n.a. 14028.14 nM PMID[484308]
NPT308 Cell Line CAKI-1 Homo sapiens GI50 n.a. 6714.29 nM PMID[484308]
NPT400 Cell Line MDA-MB-435 Homo sapiens GI50 n.a. 34673.69 nM PMID[484308]
NPT399 Cell Line SF-295 Homo sapiens GI50 n.a. 7780.37 nM PMID[484308]
NPT458 Cell Line IGROV-1 Homo sapiens GI50 n.a. 25351.29 nM PMID[484308]
NPT402 Cell Line Hs-578T Homo sapiens GI50 n.a. 7852.36 nM PMID[484308]
NPT403 Cell Line UACC-257 Homo sapiens GI50 n.a. 85703.78 nM PMID[484308]
NPT401 Cell Line 786-0 Homo sapiens GI50 n.a. 12473.84 nM PMID[484308]
NPT404 Cell Line CCRF-CEM Homo sapiens GI50 n.a. 23604.78 nM PMID[484308]
NPT405 Cell Line NCI-H226 Homo sapiens GI50 n.a. 100000.0 nM PMID[484308]
NPT139 Cell Line HT-29 Homo sapiens GI50 n.a. 79067.86 nM PMID[484308]
NPT170 Cell Line SK-MEL-28 Homo sapiens GI50 n.a. 100000.0 nM PMID[484308]
NPT406 Cell Line RXF 393 Homo sapiens GI50 n.a. 57279.6 nM PMID[484308]
NPT407 Cell Line COLO 205 Homo sapiens GI50 n.a. 76913.04 nM PMID[484308]
NPT1628 Individual Protein Thrombin Oryctolagus cuniculus TT = 14.9 s PMID[484309]
NPT1628 Individual Protein Thrombin Oryctolagus cuniculus PT = 6.0 s PMID[484309]
NPT1628 Individual Protein Thrombin Oryctolagus cuniculus APTT = 61.7 s PMID[484309]
NPT1628 Individual Protein Thrombin Oryctolagus cuniculus Activity = 5.3 g/L PMID[484309]
NPT81 Cell Line A549 Homo sapiens IC50 = 20790.0 nM PMID[484311]
NPT1668 Cell Line NCI-H157 Homo sapiens IC50 = 18640.0 nM PMID[484311]
NPT1669 Cell Line NCI-H1792 Homo sapiens IC50 > 50000.0 nM PMID[484311]
NPT455 Cell Line NCI-H522 Homo sapiens IC50 = 20210.0 nM PMID[484311]
NPT379 Cell Line HOP-62 Homo sapiens IC50 = 20060.0 nM PMID[484311]
NPT387 Cell Line M14 Homo sapiens IC50 = 37070.0 nM PMID[484311]
NPT165 Cell Line HeLa Homo sapiens IC50 = 19470.0 nM PMID[484311]
NPT518 Protein Complex Tubulin Homo sapiens IC50 > 40000.0 nM PMID[484302]
NPT518 Protein Complex Tubulin Homo sapiens Inhibition = 0.0 % PMID[484302]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. Inhibition = 85.4 % PMID[484303]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. Inhibition = 13.3 % PMID[484303]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. Inhibition = 43.1 % PMID[484303]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. Inhibition = 88.3 % PMID[484303]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. Inhibition = 38.0 % PMID[484303]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. Inhibition = 66.1 % PMID[484303]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. Inhibition = 66.3 % PMID[484303]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. Inhibition = 80.3 % PMID[484303]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. Inhibition = 77.2 % PMID[484303]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. Inhibition = 81.9 % PMID[484303]
NPT2 Others Unspecified Inhibition = 0.0 % PMID[484304]
NPT2 Others Unspecified IC50 = 9400.0 nM PMID[484305]
NPT668 Individual Protein P-glycoprotein 1 Homo sapiens IC50 = 13000.0 nM PMID[484305]
NPT27 Others Unspecified Activity = 95.3 % PMID[484310]
NPT27 Others Unspecified Activity = 101.9 % PMID[484310]
NPT22995 CELL-LINE B16-F0 Mus musculus Activity = 203.4 % PMID[484310]
NPT22995 CELL-LINE B16-F0 Mus musculus Activity = 298.7 % PMID[484310]
NPT22995 CELL-LINE B16-F0 Mus musculus Activity = 127.7 % PMID[484310]
NPT27 Others Unspecified Activity = 90.2 % PMID[484310]
NPT22995 CELL-LINE B16-F0 Mus musculus Activity = 228.0 % PMID[484310]
NPT22995 CELL-LINE B16-F0 Mus musculus Activity = 181.4 % PMID[484310]
NPT22995 CELL-LINE B16-F0 Mus musculus Activity = 225.5 % PMID[484310]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. IC50 = 12790.0 nM PMID[484311]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. IC50 = 21920.0 nM PMID[484311]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. IC50 > 50000.0 nM PMID[484311]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. IC50 = 16230.0 nM PMID[484311]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. IC50 = 45970.0 nM PMID[484311]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. IC50 = 10840.0 nM PMID[484311]

☑ Note for Activity Records:
☉ The quantitative biological activities were primarily integrated from ChEMBL (Version-30) database and were also directly collected from PubMed literature. PubMed PMID was provided as the reference link for each activity record.

  Chemically structural similarity: I. Similar Active Natural Products in NPASS

Top-200 similar NPs were calculated against the active-NP-set (includes 4,3285 NPs with experimentally-derived bioactivity available in NPASS)

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC270620 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
1.0 High Similarity NPC179126
1.0 High Similarity NPC236223
1.0 High Similarity NPC78326
0.9932 High Similarity NPC82325
0.9932 High Similarity NPC279989
0.9865 High Similarity NPC265511
0.9864 High Similarity NPC162351
0.9864 High Similarity NPC58382
0.9863 High Similarity NPC200740
0.9863 High Similarity NPC54394
0.9863 High Similarity NPC125062
0.9863 High Similarity NPC236769
0.9863 High Similarity NPC252933
0.9799 High Similarity NPC203891
0.9799 High Similarity NPC101830
0.9799 High Similarity NPC110070
0.9796 High Similarity NPC55205
0.9796 High Similarity NPC123886
0.9795 High Similarity NPC50728
0.9795 High Similarity NPC188871
0.9795 High Similarity NPC166753
0.9795 High Similarity NPC149127
0.9795 High Similarity NPC286342
0.9733 High Similarity NPC25495
0.9733 High Similarity NPC18607
0.9733 High Similarity NPC261004
0.9733 High Similarity NPC18772
0.9733 High Similarity NPC300943
0.9733 High Similarity NPC105242
0.9733 High Similarity NPC130894
0.9733 High Similarity NPC204854
0.9733 High Similarity NPC152166
0.9733 High Similarity NPC115798
0.9733 High Similarity NPC9609
0.9733 High Similarity NPC191459
0.9733 High Similarity NPC22472
0.9733 High Similarity NPC176300
0.9733 High Similarity NPC253634
0.9733 High Similarity NPC19687
0.9733 High Similarity NPC143828
0.9733 High Similarity NPC7846
0.9733 High Similarity NPC4481
0.9733 High Similarity NPC288669
0.9732 High Similarity NPC49824
0.9732 High Similarity NPC266960
0.9732 High Similarity NPC43243
0.9732 High Similarity NPC100916
0.9732 High Similarity NPC292107
0.9732 High Similarity NPC55619
0.9732 High Similarity NPC200388
0.9732 High Similarity NPC245546
0.9728 High Similarity NPC260895
0.9728 High Similarity NPC133953
0.9728 High Similarity NPC50403
0.9728 High Similarity NPC76376
0.9728 High Similarity NPC28274
0.9726 High Similarity NPC183950
0.9726 High Similarity NPC223579
0.9726 High Similarity NPC177298
0.9726 High Similarity NPC48479
0.9726 High Similarity NPC159103
0.9726 High Similarity NPC87125
0.9726 High Similarity NPC270465
0.9726 High Similarity NPC287101
0.9726 High Similarity NPC52005
0.9726 High Similarity NPC137062
0.9667 High Similarity NPC7973
0.9667 High Similarity NPC471479
0.9667 High Similarity NPC189179
0.9667 High Similarity NPC29841
0.9667 High Similarity NPC471515
0.9667 High Similarity NPC472438
0.9667 High Similarity NPC93376
0.9667 High Similarity NPC224137
0.9667 High Similarity NPC163524
0.9667 High Similarity NPC227192
0.9667 High Similarity NPC78302
0.9667 High Similarity NPC235215
0.9667 High Similarity NPC287979
0.9667 High Similarity NPC176665
0.9667 High Similarity NPC305663
0.9667 High Similarity NPC75215
0.9664 High Similarity NPC26227
0.9664 High Similarity NPC80534
0.9664 High Similarity NPC56786
0.9664 High Similarity NPC201451
0.9664 High Similarity NPC44079
0.9664 High Similarity NPC133392
0.9664 High Similarity NPC32557
0.9664 High Similarity NPC189960
0.9662 High Similarity NPC39732
0.9662 High Similarity NPC60972
0.966 High Similarity NPC219330
0.9658 High Similarity NPC120464
0.9658 High Similarity NPC261548
0.9658 High Similarity NPC195202
0.9603 High Similarity NPC193842
0.96 High Similarity NPC247017
0.96 High Similarity NPC474520
0.96 High Similarity NPC268161
0.96 High Similarity NPC98661
0.96 High Similarity NPC178854
0.96 High Similarity NPC471500
0.9597 High Similarity NPC183878
0.9597 High Similarity NPC145379
0.9597 High Similarity NPC160951
0.9597 High Similarity NPC274327
0.9597 High Similarity NPC86485
0.9597 High Similarity NPC246204
0.9597 High Similarity NPC255350
0.9597 High Similarity NPC176775
0.9597 High Similarity NPC231018
0.9597 High Similarity NPC22519
0.9597 High Similarity NPC47781
0.9597 High Similarity NPC69394
0.9589 High Similarity NPC12200
0.9589 High Similarity NPC33265
0.9589 High Similarity NPC62536
0.9589 High Similarity NPC108406
0.9539 High Similarity NPC246478
0.9536 High Similarity NPC67876
0.9536 High Similarity NPC174908
0.9533 High Similarity NPC227325
0.9533 High Similarity NPC20830
0.9533 High Similarity NPC128863
0.9533 High Similarity NPC214138
0.9533 High Similarity NPC201136
0.9533 High Similarity NPC256612
0.9533 High Similarity NPC213622
0.9533 High Similarity NPC167815
0.9533 High Similarity NPC92659
0.9533 High Similarity NPC183597
0.9533 High Similarity NPC146165
0.9533 High Similarity NPC2476
0.9533 High Similarity NPC138360
0.9533 High Similarity NPC280339
0.9533 High Similarity NPC196439
0.9533 High Similarity NPC4455
0.9533 High Similarity NPC163780
0.9533 High Similarity NPC50715
0.953 High Similarity NPC241498
0.953 High Similarity NPC198826
0.953 High Similarity NPC239128
0.953 High Similarity NPC100887
0.953 High Similarity NPC63187
0.953 High Similarity NPC120163
0.953 High Similarity NPC187498
0.953 High Similarity NPC301123
0.953 High Similarity NPC131624
0.953 High Similarity NPC71334
0.953 High Similarity NPC212678
0.953 High Similarity NPC57030
0.953 High Similarity NPC222830
0.953 High Similarity NPC156222
0.953 High Similarity NPC275722
0.953 High Similarity NPC188203
0.953 High Similarity NPC37684
0.953 High Similarity NPC301323
0.953 High Similarity NPC157784
0.953 High Similarity NPC83508
0.953 High Similarity NPC275836
0.953 High Similarity NPC162313
0.953 High Similarity NPC256283
0.953 High Similarity NPC293183
0.953 High Similarity NPC471982
0.953 High Similarity NPC304954
0.953 High Similarity NPC25270
0.9521 High Similarity NPC20791
0.9521 High Similarity NPC179271
0.9521 High Similarity NPC310259
0.9474 High Similarity NPC195832
0.9474 High Similarity NPC280680
0.947 High Similarity NPC320825
0.947 High Similarity NPC326037
0.947 High Similarity NPC13858
0.9467 High Similarity NPC250822
0.9467 High Similarity NPC18727
0.9467 High Similarity NPC75279
0.9467 High Similarity NPC276409
0.9463 High Similarity NPC225731
0.9463 High Similarity NPC304295
0.9463 High Similarity NPC226973
0.9463 High Similarity NPC308451
0.9463 High Similarity NPC205046
0.9463 High Similarity NPC59162
0.9463 High Similarity NPC208043
0.9459 High Similarity NPC328119
0.9456 High Similarity NPC299923
0.9456 High Similarity NPC51443
0.9456 High Similarity NPC74881
0.9412 High Similarity NPC282009
0.9412 High Similarity NPC287328
0.9408 High Similarity NPC52530
0.9408 High Similarity NPC470402
0.9404 High Similarity NPC208197
0.9404 High Similarity NPC234255
0.94 High Similarity NPC219582
0.94 High Similarity NPC302950
0.94 High Similarity NPC134677
0.94 High Similarity NPC477231

  Chemically structural similarity: II. Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC270620 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.9597 High Similarity NPD2801 Approved
0.9521 High Similarity NPD1512 Approved
0.947 High Similarity NPD3882 Suspended
0.9404 High Similarity NPD3817 Phase 2
0.94 High Similarity NPD1934 Approved
0.9384 High Similarity NPD1511 Approved
0.9211 High Similarity NPD2393 Clinical (unspecified phase)
0.9172 High Similarity NPD6168 Clinical (unspecified phase)
0.9172 High Similarity NPD6166 Phase 2
0.9172 High Similarity NPD6167 Clinical (unspecified phase)
0.906 High Similarity NPD4378 Clinical (unspecified phase)
0.9006 High Similarity NPD6797 Phase 2
0.8951 High Similarity NPD7251 Discontinued
0.8896 High Similarity NPD7808 Phase 3
0.8896 High Similarity NPD4338 Clinical (unspecified phase)
0.8882 High Similarity NPD7054 Approved
0.8827 High Similarity NPD7472 Approved
0.882 High Similarity NPD3818 Discontinued
0.8742 High Similarity NPD6799 Approved
0.8712 High Similarity NPD7074 Phase 3
0.8671 High Similarity NPD7075 Discontinued
0.8599 High Similarity NPD7096 Clinical (unspecified phase)
0.8535 High Similarity NPD6801 Discontinued
0.8526 High Similarity NPD4380 Phase 2
0.8491 Intermediate Similarity NPD4868 Clinical (unspecified phase)
0.8467 Intermediate Similarity NPD1550 Clinical (unspecified phase)
0.8467 Intermediate Similarity NPD1552 Clinical (unspecified phase)
0.8456 Intermediate Similarity NPD1510 Phase 2
0.8438 Intermediate Similarity NPD4381 Clinical (unspecified phase)
0.8428 Intermediate Similarity NPD5402 Approved
0.8424 Intermediate Similarity NPD7804 Clinical (unspecified phase)
0.8411 Intermediate Similarity NPD1549 Phase 2
0.8408 Intermediate Similarity NPD6599 Discontinued
0.84 Intermediate Similarity NPD2796 Approved
0.8344 Intermediate Similarity NPD6232 Discontinued
0.8333 Intermediate Similarity NPD5494 Approved
0.8333 Intermediate Similarity NPD5403 Approved
0.8323 Intermediate Similarity NPD7410 Clinical (unspecified phase)
0.8311 Intermediate Similarity NPD1240 Approved
0.8303 Intermediate Similarity NPD7473 Discontinued
0.8282 Intermediate Similarity NPD1247 Approved
0.8272 Intermediate Similarity NPD919 Approved
0.8214 Intermediate Similarity NPD7993 Clinical (unspecified phase)
0.8205 Intermediate Similarity NPD5401 Approved
0.82 Intermediate Similarity NPD1607 Approved
0.8188 Intermediate Similarity NPD943 Approved
0.8182 Intermediate Similarity NPD3926 Phase 2
0.817 Intermediate Similarity NPD970 Clinical (unspecified phase)
0.8137 Intermediate Similarity NPD1465 Phase 2
0.8137 Intermediate Similarity NPD7819 Suspended
0.8086 Intermediate Similarity NPD8443 Clinical (unspecified phase)
0.8041 Intermediate Similarity NPD1529 Clinical (unspecified phase)
0.8012 Intermediate Similarity NPD7411 Suspended
0.7988 Intermediate Similarity NPD5844 Phase 1
0.7974 Intermediate Similarity NPD651 Clinical (unspecified phase)
0.7973 Intermediate Similarity NPD1530 Clinical (unspecified phase)
0.7952 Intermediate Similarity NPD6959 Discontinued
0.7949 Intermediate Similarity NPD3750 Approved
0.7947 Intermediate Similarity NPD1613 Approved
0.7947 Intermediate Similarity NPD1612 Clinical (unspecified phase)
0.7895 Intermediate Similarity NPD447 Suspended
0.7895 Intermediate Similarity NPD230 Phase 1
0.7875 Intermediate Similarity NPD6980 Clinical (unspecified phase)
0.7867 Intermediate Similarity NPD3027 Phase 3
0.7857 Intermediate Similarity NPD7184 Clinical (unspecified phase)
0.7849 Intermediate Similarity NPD6559 Discontinued
0.7815 Intermediate Similarity NPD6859 Clinical (unspecified phase)
0.7806 Intermediate Similarity NPD1551 Phase 2
0.7806 Intermediate Similarity NPD2935 Discontinued
0.7785 Intermediate Similarity NPD6190 Approved
0.7771 Intermediate Similarity NPD2800 Approved
0.7719 Intermediate Similarity NPD3751 Discontinued
0.7711 Intermediate Similarity NPD7768 Phase 2
0.7706 Intermediate Similarity NPD7852 Clinical (unspecified phase)
0.7703 Intermediate Similarity NPD4379 Clinical (unspecified phase)
0.7692 Intermediate Similarity NPD3787 Discontinued
0.7688 Intermediate Similarity NPD6143 Clinical (unspecified phase)
0.7665 Intermediate Similarity NPD3749 Approved
0.7662 Intermediate Similarity NPD1933 Approved
0.7658 Intermediate Similarity NPD7421 Clinical (unspecified phase)
0.764 Intermediate Similarity NPD2533 Approved
0.764 Intermediate Similarity NPD2532 Approved
0.764 Intermediate Similarity NPD2534 Approved
0.7633 Intermediate Similarity NPD7199 Phase 2
0.7628 Intermediate Similarity NPD3748 Approved
0.7616 Intermediate Similarity NPD9494 Approved
0.761 Intermediate Similarity NPD4628 Phase 3
0.761 Intermediate Similarity NPD1878 Clinical (unspecified phase)
0.7607 Intermediate Similarity NPD1653 Approved
0.758 Intermediate Similarity NPD6100 Approved
0.758 Intermediate Similarity NPD6099 Approved
0.7547 Intermediate Similarity NPD1243 Approved
0.7546 Intermediate Similarity NPD920 Approved
0.7532 Intermediate Similarity NPD2344 Approved
0.7515 Intermediate Similarity NPD6234 Discontinued
0.75 Intermediate Similarity NPD6651 Approved
0.75 Intermediate Similarity NPD4419 Clinical (unspecified phase)
0.7486 Intermediate Similarity NPD8090 Clinical (unspecified phase)
0.7483 Intermediate Similarity NPD1203 Approved
0.7472 Intermediate Similarity NPD8055 Clinical (unspecified phase)
0.7468 Intermediate Similarity NPD2313 Discontinued
0.7468 Intermediate Similarity NPD6798 Discontinued
0.7459 Intermediate Similarity NPD7501 Clinical (unspecified phase)
0.7459 Intermediate Similarity NPD7879 Clinical (unspecified phase)
0.7455 Intermediate Similarity NPD3226 Approved
0.7444 Intermediate Similarity NPD8397 Clinical (unspecified phase)
0.7423 Intermediate Similarity NPD642 Clinical (unspecified phase)
0.7419 Intermediate Similarity NPD6233 Phase 2
0.7415 Intermediate Similarity NPD1548 Phase 1
0.7407 Intermediate Similarity NPD643 Clinical (unspecified phase)
0.7405 Intermediate Similarity NPD1509 Clinical (unspecified phase)
0.7405 Intermediate Similarity NPD2799 Discontinued
0.7399 Intermediate Similarity NPD2403 Approved
0.7386 Intermediate Similarity NPD5953 Discontinued
0.7371 Intermediate Similarity NPD7286 Phase 2
0.7362 Intermediate Similarity NPD7390 Discontinued
0.7355 Intermediate Similarity NPD3268 Approved
0.7346 Intermediate Similarity NPD2309 Approved
0.7345 Intermediate Similarity NPD7685 Pre-registration
0.7338 Intermediate Similarity NPD6832 Phase 2
0.7338 Intermediate Similarity NPD4908 Phase 1
0.7333 Intermediate Similarity NPD422 Phase 1
0.7325 Intermediate Similarity NPD1899 Clinical (unspecified phase)
0.7325 Intermediate Similarity NPD6355 Discontinued
0.7321 Intermediate Similarity NPD37 Approved
0.732 Intermediate Similarity NPD2798 Approved
0.7312 Intermediate Similarity NPD2346 Discontinued
0.7299 Intermediate Similarity NPD7784 Clinical (unspecified phase)
0.7296 Intermediate Similarity NPD7033 Discontinued
0.7294 Intermediate Similarity NPD4967 Phase 2
0.7294 Intermediate Similarity NPD4966 Approved
0.7294 Intermediate Similarity NPD4965 Approved
0.7285 Intermediate Similarity NPD9269 Phase 2
0.7285 Intermediate Similarity NPD9717 Approved
0.7284 Intermediate Similarity NPD6398 Clinical (unspecified phase)
0.7273 Intermediate Similarity NPD3018 Phase 2
0.7261 Intermediate Similarity NPD4060 Phase 1
0.7255 Intermediate Similarity NPD2797 Approved
0.7244 Intermediate Similarity NPD4907 Clinical (unspecified phase)
0.7241 Intermediate Similarity NPD5242 Approved
0.7239 Intermediate Similarity NPD2354 Approved
0.7238 Intermediate Similarity NPD8434 Phase 2
0.723 Intermediate Similarity NPD5536 Phase 2
0.7222 Intermediate Similarity NPD2654 Approved
0.7219 Intermediate Similarity NPD1610 Phase 2
0.7219 Intermediate Similarity NPD1547 Clinical (unspecified phase)
0.7216 Intermediate Similarity NPD2163 Approved
0.7216 Intermediate Similarity NPD7228 Approved
0.719 Intermediate Similarity NPD3225 Approved
0.7189 Intermediate Similarity NPD4363 Phase 3
0.7189 Intermediate Similarity NPD4360 Phase 2
0.7188 Intermediate Similarity NPD4308 Phase 3
0.7179 Intermediate Similarity NPD7095 Approved
0.7171 Intermediate Similarity NPD1608 Approved
0.716 Intermediate Similarity NPD6386 Approved
0.716 Intermediate Similarity NPD6385 Approved
0.7152 Intermediate Similarity NPD4357 Discontinued
0.7135 Intermediate Similarity NPD5353 Approved
0.7134 Intermediate Similarity NPD411 Approved
0.7124 Intermediate Similarity NPD2983 Phase 2
0.7124 Intermediate Similarity NPD2982 Phase 2
0.7118 Intermediate Similarity NPD6844 Discontinued
0.7117 Intermediate Similarity NPD1652 Phase 2
0.7108 Intermediate Similarity NPD7004 Clinical (unspecified phase)
0.7108 Intermediate Similarity NPD3688 Clinical (unspecified phase)
0.7108 Intermediate Similarity NPD7422 Clinical (unspecified phase)
0.7108 Intermediate Similarity NPD3146 Approved
0.7107 Intermediate Similarity NPD4340 Discontinued
0.7099 Intermediate Similarity NPD1471 Phase 3
0.709 Intermediate Similarity NPD6779 Approved
0.709 Intermediate Similarity NPD6780 Approved
0.709 Intermediate Similarity NPD6776 Approved
0.709 Intermediate Similarity NPD6782 Approved
0.709 Intermediate Similarity NPD6781 Approved
0.709 Intermediate Similarity NPD6777 Approved
0.709 Intermediate Similarity NPD6778 Approved
0.7089 Intermediate Similarity NPD4062 Phase 3
0.7086 Intermediate Similarity NPD5711 Approved
0.7086 Intermediate Similarity NPD5710 Approved
0.7072 Intermediate Similarity NPD8312 Approved
0.7072 Intermediate Similarity NPD8313 Approved
0.707 Intermediate Similarity NPD4625 Phase 3
0.7068 Intermediate Similarity NPD7435 Discontinued
0.7066 Intermediate Similarity NPD5049 Phase 3
0.7059 Intermediate Similarity NPD2981 Phase 2
0.7059 Intermediate Similarity NPD4361 Phase 2
0.7059 Intermediate Similarity NPD4362 Clinical (unspecified phase)
0.7055 Intermediate Similarity NPD228 Approved
0.7049 Intermediate Similarity NPD8150 Discontinued
0.7047 Intermediate Similarity NPD7584 Approved
0.7035 Intermediate Similarity NPD4288 Approved
0.7032 Intermediate Similarity NPD3267 Approved
0.7032 Intermediate Similarity NPD3266 Approved
0.703 Intermediate Similarity NPD3887 Approved
0.702 Intermediate Similarity NPD9268 Approved
0.7013 Intermediate Similarity NPD4749 Approved
0.6994 Remote Similarity NPD2355 Clinical (unspecified phase)
0.6994 Remote Similarity NPD7266 Discontinued
0.6994 Remote Similarity NPD2353 Approved
0.6993 Remote Similarity NPD1201 Approved

  Bioactivity similarity: Similar Natural Products in NPASS

Bioactivity similarity was calculated based on bioactivity descriptors of compounds. The bioactivity descriptors were calculated by a recently developed AI algorithm Chemical Checker (CC) [Nature Biotechnology, 38:1087–1096, 2020; Nature Communications, 12:3932, 2021], which evaluated bioactivity similarities at five levels:
A: chemistry similarity;
B: biological targets similarity;
C: networks similarity;
D: cell-based bioactivity similarity;
E: similarity based on clinical data.

Those 5 categories of CC bioactivity descriptors were calculated and then subjected to manifold projection using UMAP algorithm, to project all NPs on a 2-Dimensional space. The current NP was highlighted with a small circle in the 2-D map. Below figures: left-to-right, A-to-E.

A: chemistry similarity
B: biological targets similarity
C: networks similarity
D: cell-based bioactivity similarity
E: similarity based on clinical data