Organism Name: Rubus loganobaccus| Organism ID: | NPO42026 |
| Organism Name: | Rubus loganobaccus |
| Native / Engineered Organism: | Native Organism |
| Matched Taxonomy Level: | Species |
| Organism External ID: | NCBI_Taxonomy_ID[ 483748] |
| Organism Synonyms: | |
| Genus: | Rubus |
| Family: | n.a. |
| Kingdom: | n.a. |
| SuperKingdom: | n.a. |
Individual Natural Products| Natural Product ID | Prefer Name (or InChiKey) | IUPAC Name | Number of Targets | Number of Activity Records |
|---|---|---|---|---|
| NPC489907 | Cyanidin 3-(6''-acetyl-galactoside) | n.a. | 0 | 0 |
| NPC55412 | Retinol | (2E,4E,6E,8E)-3,7-dimethyl-9-(2,6,6-trimethylcyclohexen-1-yl)nona-2,4,6,8-tetraen-1-ol | 108 | 1655 |
| NPC17810 | Beta Carotene | 1,3,3-trimethyl-2-[(1E,3E,5E,7E,9E,11E,13E,15E,17E)-3,7,12,16-tetramethyl-18-(2,6,6-trimethylcyclohexen-1-yl)octadeca-1,3,5,7,9,11,13,15,17-nonaenyl]cyclohexene | 20 | 189 |
| NPC189436 | Thiamine Hydrochloride | [5-[[5-(2-hydroxyethyl)-4-methyl-1,3-thiazol-3-ium-3-yl]methyl]-2-methylpyrimidin-4-yl]azanium;dichloride | 11 | 16 |
| NPC94167 | Riboflavin | 7,8-dimethyl-10-[(2S,3S,4R)-2,3,4,5-tetrahydroxypentyl]benzo[g]pteridine-2,4-dione | 45 | 211 |
| NPC167400 | Niacin | pyridine-3-carboxylic acid | 65 | 1934 |
| NPC269919 | Pyridoxine | 4,5-bis(hydroxymethyl)-2-methylpyridin-3-ol | 16 | 45 |
| NPC328447 | Pantothenic Acid, Racemic | 3-[(2,4-dihydroxy-3,3-dimethylbutanoyl)amino]propanoic acid | 1 | 2 |
| NPC147983 | Folic Acid | (2S)-2-[[4-[(2-amino-4-oxo-1H-pteridin-6-yl)methylamino]benzoyl]amino]pentanedioic acid | 57 | 137 |
| NPC187770 | Ascorbate | (2R)-2-[(1S)-1,2-dihydroxyethyl]-3,4-dihydroxy-2H-furan-5-one | 62 | 1115 |
| NPC489908 | Petunidin 3-O-(6''-acetyl-galactoside) | n.a. | 0 | 0 |
| NPC130683 | Sucrose | (2R,3R,4S,5S,6R)-2-[(2S,3S,4S,5R)-3,4-dihydroxy-2,5-bis(hydroxymethyl)oxolan-2-yl]oxy-6-(hydroxymethyl)oxane-3,4,5-triol | 28 | 62 |
| NPC242580 | Vitamin E | (2R)-2,5,7,8-tetramethyl-2-[(4R,8R)-4,8,12-trimethyltridecyl]-3,4-dihydrochromen-6-ol | 57 | 425 |
| NPC150950 | Thiamine | 2-[3-[(4-amino-2-methylpyrimidin-5-yl)methyl]-4-methyl-1,3-thiazol-3-ium-5-yl]ethanol | 15 | 43 |
| NPC136014 | Choline | 2-hydroxyethyl(trimethyl)azanium | 32 | 60 |
| NPC1682 | 2-Methyl-3-[(E)-3,7,11,15-Tetramethylhexadec-2-Enyl]Naphthalene-1,4-Dione | 2-methyl-3-[(E)-3,7,11,15-tetramethylhexadec-2-enyl]naphthalene-1,4-dione | 16 | 20 |
| NPC60151 | GHOKWGTUZJEAQD-ZETCQYMHSA-N | n.a. | 7 | 24 |
| NPC179950 | Isoquercetin | 2-(3,4-dihydroxyphenyl)-5,7-dihydroxy-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxychromen-4-one | 100 | 265 |
| NPC20791 | Quercetin | 2-(3,4-dihydroxyphenyl)-3,5,7-trihydroxychromen-4-one | 553 | 2064 |
| NPC278068 | 3-O-Caffeoylquinic Acid | (1R,3R,4S,5R)-3-[(E)-3-(3,4-dihydroxyphenyl)prop-2-enoyl]oxy-1,4,5-trihydroxycyclohexane-1-carboxylic acid | 8 | 11 |
| NPC281131 | Hyperoside | 2-(3,4-dihydroxyphenyl)-5,7-dihydroxy-3-[(2S,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxychromen-4-one | 58 | 115 |
| NPC302857 | Chlorogenic Acid | (1S,3R,4R,5R)-3-[(E)-3-(3,4-dihydroxyphenyl)prop-2-enoyl]oxy-1,4,5-trihydroxycyclohexane-1-carboxylic acid | 68 | 174 |
NPs produced by Co-culture Organisms (for Co-culture organisms, the full organism list can be found HERE)| Organism Name | Producer Organism | Inducer Organism | NP ID | NP Name | Effect of Co-culture | Reference |
|---|
NPs produced by Engineered Organisms (for Engineered organisms, the full organism list can be found HERE)| Organism Name | Parent Organism Name | Engineered Gene in Organism | Purpose of Engineering | Engineering Category | Engineering Description | NP ID | NP Name | NP Yeild of Parent Organism | NP Yeild of Engineered Organism | Yeild Change | Reference |
|---|
The Quantitative Compositions of NPs in Organism| Organism ID | NP ID | Organism Material Preparation | Organism Part | NP Quantity (Standard) | NP Quantity (Minimum) | NP Quantity (Maximum) | Quantity Unit | Reference |
|---|---|---|---|---|---|---|---|---|
| NPO42026 | NPC55412 | Raw, Frozen | n.a. | 35 | n.a. | n.a. | IU | Database [USDA] |
| NPO42026 | NPC489907 | Raw, Frozen | n.a. | 310 | n.a. | n.a. | mg/100g | Database [USDA] |
| NPO42026 | NPC489908 | Raw, Frozen | n.a. | 2 | n.a. | n.a. | mg/100g | Database [USDA] |
| NPO42026 | NPC130683 | Raw, Frozen | n.a. | 7700 | n.a. | n.a. | mg/100g | Database [USDA] |
| NPO42026 | NPC17810 | Raw, Frozen | n.a. | 0.021 | n.a. | n.a. | mg/100g | Database [USDA] |
| NPO42026 | NPC242580 | Raw, Frozen | n.a. | 0.87 | n.a. | n.a. | mg/100g | Database [USDA] |
| NPO42026 | NPC187770 | Raw, Frozen | n.a. | 15.3 | n.a. | n.a. | mg/100g | Database [USDA] |
| NPO42026 | NPC150950 | Raw, Frozen | n.a. | 0.05 | n.a. | n.a. | mg/100g | Database [USDA] |
| NPO42026 | NPC94167 | Raw, Frozen | n.a. | 0.034 | n.a. | n.a. | mg/100g | Database [USDA] |
| NPO42026 | NPC167400 | Raw, Frozen | n.a. | 0.84 | n.a. | n.a. | mg/100g | Database [USDA] |
| NPO42026 | NPC328447 | Raw, Frozen | n.a. | 0.244 | n.a. | n.a. | mg/100g | Database [USDA] |
| NPO42026 | NPC269919 | Raw, Frozen | n.a. | 0.065 | n.a. | n.a. | mg/100g | Database [USDA] |
| NPO42026 | NPC147983 | Raw, Frozen | n.a. | 0.026 | n.a. | n.a. | mg/100g | Database [USDA] |
| NPO42026 | NPC136014 | Raw, Frozen | n.a. | 8.5 | n.a. | n.a. | mg/100g | Database [USDA] |
| NPO42026 | NPC1682 | Raw, Frozen | n.a. | 0.0078 | n.a. | n.a. | mg/100g | Database [USDA] |
| NPO42026 | NPC489907 | Raw, Frozen | n.a. | 300 | n.a. | n.a. | mg/100g | Database [DTU] |
| NPO42026 | NPC17810 | Raw, Frozen | n.a. | 0.024 | n.a. | n.a. | mg/100g | Database [DTU] |
| NPO42026 | NPC189436 | Raw, Frozen | n.a. | 0.05 | n.a. | n.a. | mg/100g | Database [DTU] |
| NPO42026 | NPC94167 | Raw, Frozen | n.a. | 0.034 | n.a. | n.a. | mg/100g | Database [DTU] |
| NPO42026 | NPC167400 | Raw, Frozen | n.a. | 0.84 | n.a. | n.a. | mg/100g | Database [DTU] |
| NPO42026 | NPC269919 | Raw, Frozen | n.a. | 0.065 | n.a. | n.a. | mg/100g | Database [DTU] |
| NPO42026 | NPC328447 | Raw, Frozen | n.a. | 0.244 | n.a. | n.a. | mg/100g | Database [DTU] |
| NPO42026 | NPC147983 | Raw, Frozen | n.a. | 0.026 | n.a. | n.a. | mg/100g | Database [DTU] |
| NPO42026 | NPC187770 | Raw, Frozen | n.a. | 15.3 | n.a. | n.a. | mg/100g | Database [DTU] |
| NPO42026 | NPC167400 | Raw, Frozen | n.a. | 0.84 | n.a. | n.a. | NE | Database [DTU] |
| NPO42026 | NPC55412 | Raw, Frozen | n.a. | 2 | n.a. | n.a. | RE | Database [USDA] |
| NPO42026 | NPC55412 | Raw, Frozen | n.a. | 2 | n.a. | n.a. | RE | Database [DTU] |
| NPO42026 | NPC20791 | n.a. | Fruits | 6.3 | n.a. | n.a. | mg/100g of FW | Database [Phenol-Explorer] |
| NPO42026 | NPC20791 | n.a. | Fruits | 8.5 | n.a. | n.a. | mg/100g of FW | Database [Phenol-Explorer] |
| NPO42026 | NPC147983 | n.a. | Fruits | 0.026 | n.a. | n.a. | mg/100g | Database [FooDB] |
| NPO42026 | NPC167400 | n.a. | Fruits | 0.84 | n.a. | n.a. | mg/100g | Database [FooDB] |
| NPO42026 | NPC17810 | n.a. | Fruits | 0.024 | n.a. | n.a. | mg/100g | Database [FooDB] |
| NPO42026 | NPC187770 | n.a. | Fruits | 15.3 | n.a. | n.a. | mg/100g | Database [FooDB] |
| NPO42026 | NPC189436 | n.a. | Fruits | 0.05 | n.a. | n.a. | mg/100g | Database [FooDB] |
| NPO42026 | NPC269919 | n.a. | Fruits | 0.065 | n.a. | n.a. | mg/100g | Database [FooDB] |
| NPO42026 | NPC60151 | n.a. | Fruits | 0.244 | n.a. | n.a. | mg/100g | Database [FooDB] |
| NPO42026 | NPC94167 | n.a. | Fruits | 0.034 | n.a. | n.a. | mg/100g | Database [FooDB] |
| NPO42026 | NPC167400 | n.a. | Fruits | 0.84 | n.a. | n.a. | NE | Database [FooDB] |
| NPO42026 | NPC55412 | n.a. | Fruits | 2 | n.a. | n.a. | RE | Database [FooDB] |
| NPO42026 | NPC179950 | n.a. | n.a. | 2.04 | n.a. | n.a. | mg/100mL | Database [Phenol-Explorer] |
| NPO42026 | NPC278068 | n.a. | n.a. | 54.4 | n.a. | n.a. | mg/100mL | Database [Phenol-Explorer] |
| NPO42026 | NPC281131 | n.a. | n.a. | 2.5 | n.a. | n.a. | mg/100mL | Database [Phenol-Explorer] |
| NPO42026 | NPC302857 | n.a. | n.a. | 27.3 | n.a. | n.a. | mg/100mL | Database [Phenol-Explorer] |