NPASS Compound

Natural Product: NPC484545

Natural Product ID	NPC484545
Common Name ? The InCHIKey will be temporarily assigned as the "Common Name" if no IUPAC name or alternative short name is available.	PTGYVZJEKPFSQH-GJNCOINDSA-N
IUPAC Name	n.a.
Synonyms
Synthetic Gene Cluster	n.a.
ChEMBL Identifier	n.a.
PubChem CID	21635803
Chemical Classification	CHEMONTID:0000000 [Organic compounds] [CHEMONTID:0000012] Lipids and lipid-like molecules [CHEMONTID:0000258] Steroids and steroid derivatives [CHEMONTID:0001013] Steroidal glycosides

The Chemical Classification was calculated by Classyfire, a software for chemical taxonomy calculation. Reference: DOI:10.1186/s13321-016-0174-y.

Chemical Representations

RDKit 3D 162171 0 0 0 0 0 0 0 0999 V2000 12.7034 3.7291 0.5124 C 0 0 0 0 0 0 0 0 0 0 0 0 11.9872 2.7083 0.0449 C 0 0 0 0 0 0 0 0 0 0 0 0 12.4708 2.0276 -1.1748 C 0 0 0 0 0 0 0 0 0 0 0 0 10.7961 2.2716 0.7453 C 0 0 1 0 0 0 0 0 0 0 0 0 10.3374 3.3024 1.7993 C 0 0 2 0 0 0 0 0 0 0 0 0 8.9594 2.8174 2.1676 C 0 0 0 0 0 0 0 0 0 0 0 0 8.5735 1.9160 1.0432 C 0 0 1 0 0 0 0 0 0 0 0 0 8.9433 0.5086 1.4673 C 0 0 0 0 0 0 0 0 0 0 0 0 7.1748 2.0069 0.6056 C 0 0 0 0 0 0 0 0 0 0 0 0 6.2112 2.2441 1.4903 C 0 0 0 0 0 0 0 0 0 0 0 0 4.7963 2.3126 0.9446 C 0 0 0 0 0 0 0 0 0 0 0 0 4.7478 1.1429 -0.0011 C 0 0 1 0 0 0 0 0 0 0 0 0 3.3650 0.6428 -0.1818 C 0 0 0 0 0 0 0 0 0 0 0 0 2.8216 0.2788 1.1862 C 0 0 0 0 0 0 0 0 0 0 0 0 2.4128 1.6175 -0.8222 C 0 0 0 0 0 0 0 0 0 0 0 0 3.3404 -0.6305 -0.9955 C 0 0 2 0 0 0 0 0 0 0 0 0 4.2336 -0.5395 -2.2171 C 0 0 0 0 0 0 0 0 0 0 0 0 5.6098 -0.0025 -1.9405 C 0 0 0 0 0 0 0 0 0 0 0 0 5.5661 1.3242 -1.2181 C 0 0 1 0 0 0 0 0 0 0 0 0 4.9769 2.3092 -2.2324 C 0 0 0 0 0 0 0 0 0 0 0 0 6.9172 1.8365 -0.8675 C 0 0 2 0 0 0 0 0 0 0 0 0 8.0253 1.0184 -1.4934 C 0 0 0 0 0 0 0 0 0 0 0 0 9.3995 1.6431 -1.3017 C 0 0 0 0 0 0 0 0 0 0 0 0 9.4819 2.3960 -0.0664 C 0 0 2 0 0 0 0 0 0 0 0 0 9.5085 3.8689 -0.2047 C 0 0 0 0 0 0 0 0 0 0 0 0 9.0776 4.5402 -1.1552 O 0 0 0 0 0 0 0 0 0 0 0 0 10.1086 4.4100 0.9248 O 0 0 0 0 0 0 0 0 0 0 0 0 2.1066 -1.0428 -1.4454 O 0 0 0 0 0 0 0 0 0 0 0 0 1.8168 -2.2990 -1.0376 C 0 0 1 0 0 0 0 0 0 0 0 0 0.4682 -2.6619 -0.5759 C 0 0 1 0 0 0 0 0 0 0 0 0 0.7502 -3.7594 0.4770 C 0 0 2 0 0 0 0 0 0 0 0 0 1.4911 -4.8030 -0.3222 C 0 0 1 0 0 0 0 0 0 0 0 0 1.6417 -4.4925 -1.7729 C 0 0 0 0 0 0 0 0 0 0 0 0 2.0737 -3.2414 -2.1106 O 0 0 0 0 0 0 0 0 0 0 0 0 2.7475 -5.0905 0.2014 O 0 0 0 0 0 0 0 0 0 0 0 0 -0.3180 -4.1670 1.1791 O 0 0 0 0 0 0 0 0 0 0 0 0 -0.4198 -1.7283 -0.1776 O 0 0 0 0 0 0 0 0 0 0 0 0 -1.6175 -1.7160 -0.9377 C 0 0 1 0 0 0 0 0 0 0 0 0 -2.7771 -2.3584 -0.2040 C 0 0 1 0 0 0 0 0 0 0 0 0 -3.9432 -1.4009 -0.2283 C 0 0 2 0 0 0 0 0 0 0 0 0 -3.5174 0.0068 0.1483 C 0 0 1 0 0 0 0 0 0 0 0 0 -2.5128 0.4466 -0.8578 C 0 0 1 0 0 0 0 0 0 0 0 0 -1.5793 1.4905 -0.2585 C 0 0 0 0 0 0 0 0 0 0 0 0 -1.8822 -0.5416 -1.5521 O 0 0 0 0 0 0 0 0 0 0 0 0 -4.6947 0.7586 0.1594 O 0 0 0 0 0 0 0 0 0 0 0 0 -5.0796 1.2176 1.3985 C 0 0 1 0 0 0 0 0 0 0 0 0 -5.2564 2.7148 1.4837 C 0 0 1 0 0 0 0 0 0 0 0 0 -6.6840 3.0379 1.8800 C 0 0 2 0 0 0 0 0 0 0 0 0 -6.8928 2.3819 3.2372 C 0 0 1 0 0 0 0 0 0 0 0 0 -6.5664 0.9023 3.1330 C 0 0 1 0 0 0 0 0 0 0 0 0 -7.6816 0.0709 3.6876 C 0 0 0 0 0 0 0 0 0 0 0 0 -8.0029 0.4172 4.9980 O 0 0 0 0 0 0 0 0 0 0 0 0 -6.2473 0.5527 1.8241 O 0 0 0 0 0 0 0 0 0 0 0 0 -6.1208 3.0009 4.2032 O 0 0 0 0 0 0 0 0 0 0 0 0 -7.5548 2.5567 0.9345 O 0 0 0 0 0 0 0 0 0 0 0 0 -8.4309 3.4705 0.4111 C 0 0 1 0 0 0 0 0 0 0 0 0 -8.3440 3.6621 -1.0715 C 0 0 1 0 0 0 0 0 0 0 0 0 -9.6958 3.5388 -1.7431 C 0 0 2 0 0 0 0 0 0 0 0 0 -10.3852 2.2496 -1.3929 C 0 0 1 0 0 0 0 0 0 0 0 0 -10.0091 1.9176 0.0404 C 0 0 0 0 0 0 0 0 0 0 0 0 -9.7742 3.1367 0.6962 O 0 0 0 0 0 0 0 0 0 0 0 0 -11.7702 2.4491 -1.4174 O 0 0 0 0 0 0 0 0 0 0 0 0 -9.5378 3.7147 -3.0986 O 0 0 0 0 0 0 0 0 0 0 0 0 -10.2092 4.8294 -3.5845 C 0 0 0 0 0 0 0 0 0 0 0 0 -7.8620 4.9492 -1.4057 O 0 0 0 0 0 0 0 0 0 0 0 0 -4.4347 3.2385 2.4544 O 0 0 0 0 0 0 0 0 0 0 0 0 -4.8506 -1.8161 0.7493 O 0 0 0 0 0 0 0 0 0 0 0 0 -3.2605 -3.4759 -0.9435 O 0 0 0 0 0 0 0 0 0 0 0 0 -3.3313 -4.5923 -0.1244 C 0 0 1 0 0 0 0 0 0 0 0 0 -4.7409 -5.1168 -0.0055 C 0 0 1 0 0 0 0 0 0 0 0 0 -4.9628 -6.2050 -1.0324 C 0 0 2 0 0 0 0 0 0 0 0 0 -4.0521 -7.3523 -0.6304 C 0 0 1 0 0 0 0 0 0 0 0 0 -2.7343 -6.8493 -0.1126 C 0 0 1 0 0 0 0 0 0 0 0 0 -1.6423 -7.7553 -0.6653 C 0 0 0 0 0 0 0 0 0 0 0 0 -2.4354 -5.5796 -0.5248 O 0 0 0 0 0 0 0 0 0 0 0 0 -4.6458 -8.1356 0.3589 O 0 0 0 0 0 0 0 0 0 0 0 0 -4.5520 -5.7484 -2.2667 O 0 0 0 0 0 0 0 0 0 0 0 0 -4.9707 -5.6009 1.2614 O 0 0 0 0 0 0 0 0 0 0 0 0 12.3866 4.2589 1.4039 H 0 0 0 0 0 0 0 0 0 0 0 0 13.6143 4.0363 0.0007 H 0 0 0 0 0 0 0 0 0 0 0 0 11.9105 2.3449 -2.0606 H 0 0 0 0 0 0 0 0 0 0 0 0 12.4836 0.9009 -1.0741 H 0 0 0 0 0 0 0 0 0 0 0 0 13.5599 2.2725 -1.3181 H 0 0 0 0 0 0 0 0 0 0 0 0 10.8830 1.2968 1.2426 H 0 0 0 0 0 0 0 0 0 0 0 0 11.0117 3.4562 2.6059 H 0 0 0 0 0 0 0 0 0 0 0 0 8.9338 2.3421 3.1698 H 0 0 0 0 0 0 0 0 0 0 0 0 8.2753 3.6810 2.2270 H 0 0 0 0 0 0 0 0 0 0 0 0 9.5107 -0.0661 0.7440 H 0 0 0 0 0 0 0 0 0 0 0 0 9.4703 0.4782 2.4414 H 0 0 0 0 0 0 0 0 0 0 0 0 7.9825 -0.0368 1.6421 H 0 0 0 0 0 0 0 0 0 0 0 0 6.3638 2.3848 2.5234 H 0 0 0 0 0 0 0 0 0 0 0 0 4.0619 2.2141 1.7402 H 0 0 0 0 0 0 0 0 0 0 0 0 4.6715 3.2892 0.4511 H 0 0 0 0 0 0 0 0 0 0 0 0 5.2833 0.3007 0.5700 H 0 0 0 0 0 0 0 0 0 0 0 0 2.0949 -0.5843 1.1036 H 0 0 0 0 0 0 0 0 0 0 0 0 2.3444 1.1354 1.7116 H 0 0 0 0 0 0 0 0 0 0 0 0 3.6174 -0.0917 1.8654 H 0 0 0 0 0 0 0 0 0 0 0 0 2.0344 1.2883 -1.8071 H 0 0 0 0 0 0 0 0 0 0 0 0 1.5022 1.7371 -0.1636 H 0 0 0 0 0 0 0 0 0 0 0 0 2.8024 2.6425 -0.9276 H 0 0 0 0 0 0 0 0 0 0 0 0 3.7783 -1.4551 -0.3701 H 0 0 0 0 0 0 0 0 0 0 0 0 3.6980 -0.0295 -3.0429 H 0 0 0 0 0 0 0 0 0 0 0 0 4.3727 -1.6020 -2.5779 H 0 0 0 0 0 0 0 0 0 0 0 0 6.1979 -0.7727 -1.4488 H 0 0 0 0 0 0 0 0 0 0 0 0 6.0560 0.1888 -2.9515 H 0 0 0 0 0 0 0 0 0 0 0 0 4.8934 3.3239 -1.8471 H 0 0 0 0 0 0 0 0 0 0 0 0 5.7936 2.3751 -3.0205 H 0 0 0 0 0 0 0 0 0 0 0 0 4.1183 1.9173 -2.7753 H 0 0 0 0 0 0 0 0 0 0 0 0 7.0525 2.8701 -1.2800 H 0 0 0 0 0 0 0 0 0 0 0 0 7.8360 1.0630 -2.6022 H 0 0 0 0 0 0 0 0 0 0 0 0 8.0826 -0.0136 -1.1318 H 0 0 0 0 0 0 0 0 0 0 0 0 10.1676 0.8543 -1.3874 H 0 0 0 0 0 0 0 0 0 0 0 0 9.5764 2.3558 -2.1670 H 0 0 0 0 0 0 0 0 0 0 0 0 2.6485 -2.6234 -0.3288 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.0643 -3.2557 -1.4010 H 0 0 0 0 0 0 0 0 0 0 0 0 1.5107 -3.2843 1.1732 H 0 0 0 0 0 0 0 0 0 0 0 0 0.8755 -5.7351 -0.2548 H 0 0 0 0 0 0 0 0 0 0 0 0 0.7516 -4.8282 -2.3852 H 0 0 0 0 0 0 0 0 0 0 0 0 2.4503 -5.1978 -2.1428 H 0 0 0 0 0 0 0 0 0 0 0 0 2.6685 -5.0037 1.1992 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.1501 -4.2208 2.1633 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.4040 -2.4687 -1.7694 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.5531 -2.6158 0.8317 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.4598 -1.4256 -1.2073 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.0652 -0.0872 1.1541 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.1002 1.0305 -1.6334 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.3231 1.1685 0.7706 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.1285 2.4717 -0.1385 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.7220 1.6308 -0.9248 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.3124 0.9177 2.1379 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.0719 3.2276 0.5152 H 0 0 0 0 0 0 0 0 0 0 0 0 -6.8666 4.1130 2.0285 H 0 0 0 0 0 0 0 0 0 0 0 0 -7.9471 2.4647 3.5498 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.6622 0.7259 3.7486 H 0 0 0 0 0 0 0 0 0 0 0 0 -7.4212 -0.9915 3.6195 H 0 0 0 0 0 0 0 0 0 0 0 0 -8.6335 0.2035 3.1121 H 0 0 0 0 0 0 0 0 0 0 0 0 -8.9122 0.0416 5.2129 H 0 0 0 0 0 0 0 0 0 0 0 0 -6.5644 3.8098 4.5842 H 0 0 0 0 0 0 0 0 0 0 0 0 -8.2741 4.4825 0.8732 H 0 0 0 0 0 0 0 0 0 0 0 0 -7.6322 2.9411 -1.5077 H 0 0 0 0 0 0 0 0 0 0 0 0 -10.3512 4.3745 -1.3709 H 0 0 0 0 0 0 0 0 0 0 0 0 -10.1537 1.4294 -2.0813 H 0 0 0 0 0 0 0 0 0 0 0 0 -9.0405 1.3565 -0.0344 H 0 0 0 0 0 0 0 0 0 0 0 0 -10.7878 1.3291 0.5233 H 0 0 0 0 0 0 0 0 0 0 0 0 -12.2459 1.7083 -1.8886 H 0 0 0 0 0 0 0 0 0 0 0 0 -9.8715 5.7805 -3.1168 H 0 0 0 0 0 0 0 0 0 0 0 0 -11.2976 4.7733 -3.5459 H 0 0 0 0 0 0 0 0 0 0 0 0 -9.9211 4.9314 -4.6660 H 0 0 0 0 0 0 0 0 0 0 0 0 -8.3827 5.6470 -0.8943 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.2057 4.1765 2.3541 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.4575 -1.6171 1.6353 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.0126 -4.2870 0.8926 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.4436 -4.3085 -0.1942 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.9947 -6.5446 -0.9700 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.8565 -8.0311 -1.4824 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.6619 -6.9738 1.0049 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.3447 -7.3727 -1.6847 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.9768 -8.7914 -0.8307 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.7344 -7.7707 -0.0365 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.2444 -7.8982 1.2356 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.8152 -4.8191 -2.4656 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.9198 -5.8214 1.4097 H 0 0 0 0 0 0 0 0 0 0 0 0 1 2 2 0 2 3 1 0 2 4 1 0 4 5 1 0 5 6 1 0 6 7 1 0 7 8 1 1 7 9 1 0 9 10 2 0 10 11 1 0 11 12 1 0 12 13 1 0 13 14 1 0 13 15 1 0 13 16 1 0 16 17 1 0 17 18 1 0 18 19 1 0 19 20 1 6 19 21 1 0 21 22 1 0 22 23 1 0 24 23 1 6 24 25 1 0 25 26 2 0 25 27 1 0 16 28 1 0 28 29 1 0 29 30 1 0 30 31 1 0 31 32 1 0 32 33 1 0 33 34 1 0 32 35 1 0 31 36 1 0 30 37 1 0 37 38 1 0 38 39 1 0 39 40 1 0 40 41 1 0 41 42 1 0 42 43 1 0 42 44 1 0 41 45 1 0 45 46 1 0 46 47 1 0 47 48 1 0 48 49 1 0 49 50 1 0 50 51 1 0 51 52 1 0 50 53 1 0 49 54 1 0 48 55 1 0 55 56 1 0 56 57 1 0 57 58 1 0 58 59 1 0 59 60 1 0 60 61 1 0 59 62 1 0 58 63 1 0 63 64 1 0 57 65 1 0 47 66 1 0 40 67 1 0 39 68 1 0 68 69 1 0 69 70 1 0 70 71 1 0 71 72 1 0 72 73 1 0 73 74 1 0 73 75 1 0 72 76 1 0 71 77 1 0 70 78 1 0 24 4 1 0 34 29 1 0 44 38 1 0 53 46 1 0 61 56 1 0 75 69 1 0 27 5 1 0 24 7 1 0 21 9 1 0 19 12 1 0 1 79 1 0 1 80 1 0 3 81 1 0 3 82 1 0 3 83 1 0 4 84 1 1 5 85 1 1 6 86 1 0 6 87 1 0 8 88 1 0 8 89 1 0 8 90 1 0 10 91 1 0 11 92 1 0 11 93 1 0 12 94 1 1 14 95 1 0 14 96 1 0 14 97 1 0 15 98 1 0 15 99 1 0 15100 1 0 16101 1 1 17102 1 0 17103 1 0 18104 1 0 18105 1 0 20106 1 0 20107 1 0 20108 1 0 21109 1 6 22110 1 0 22111 1 0 23112 1 0 23113 1 0 29114 1 1 30115 1 6 31116 1 1 32117 1 6 33118 1 0 33119 1 0 35120 1 0 36121 1 0 38122 1 6 39123 1 1 40124 1 6 41125 1 1 42126 1 6 43127 1 0 43128 1 0 43129 1 0 46130 1 1 47131 1 6 48132 1 1 49133 1 1 50134 1 1 51135 1 0 51136 1 0 52137 1 0 54138 1 0 56139 1 1 57140 1 6 58141 1 1 59142 1 6 60143 1 0 60144 1 0 62145 1 0 64146 1 0 64147 1 0 64148 1 0 65149 1 0 66150 1 0 67151 1 0 69152 1 1 70153 1 6 71154 1 6 72155 1 6 73156 1 1 74157 1 0 74158 1 0 74159 1 0 76160 1 0 77161 1 0 78162 1 0 M END

Standard InCHIKey	PTGYVZJEKPFSQH-GJNCOINDSA-N
Standard InCHI	InChI=1S/C54H84O24/c1-20(2)31-27-16-53(8)24-10-11-29-51(5,6)30(13-14-52(29,7)23(24)12-15-54(31,53)50(66)73-27)74-48-43(33(59)25(56)18-69-48)78-49-44(77-46-36(62)35(61)32(58)21(3)70-46)37(63)40(22(4)71-49)75-47-39(65)42(34(60)28(17-55)72-47)76-45-38(64)41(67-9)26(57)19-68-45/h10,21-23,25-49,55-65H,1,11-19H2,2-9H3/t21-,22-,23-,25-,26-,27+,28-,29+,30+,31+,32-,33+,34-,35+,36-,37+,38-,39-,40-,41+,42+,43-,44-,45+,46+,47+,48+,49+,52-,53+,54-/m1/s1
SMILES	C=C(C)[C@H]1[C@@H]2C[C@@]3(C)C4=CC[C@H]5C(C)(C)[C@H](CC[C@]5(C)[C@@H]4CC[C@]13C(=O)O2)O[C@H]1[C@@H]([C@H]([C@@H](CO1)O)O)O[C@H]1[C@@H]([C@H]([C@@H]([C@@H](C)O1)O[C@H]1[C@@H]([C@H]([C@@H]([C@@H](CO)O1)O)O[C@H]1[C@@H]([C@H]([C@@H](CO1)O)OC)O)O)O)O[C@H]1[C@@H]([C@H]([C@@H]([C@@H](C)O1)O)O)O

Calculated Properties

Physi-Chem Properties

Molecular Weight:	1116.54	Volume:	1060.031 ? Van der Waals volume.
Dense:	1.053	LogP:	0.359 ? The logarithm of the n-octanol/water distribution coefficients.
logD7.4:	1.335 ? The logarithm of the n-octanol/water distribution coefficient at pH=7.4.	LogS:	-3.011 ? The logarithm of aqueous solubility value.
Rotatable Bonds:	13.0	Rigid Bonds:	55.0
TPSA:	350.36 ? Topological Polar Surface Area.	H-Bond Acceptor:	24.0
H-Bond Donor:	11.0	Rings:	10.0
Heavy Atoms:	24.0

MedChem Properties

QED Drug-Likeness Score:	0.071	GASA:	1.0 ? GASA represents the probability of being difficult to synthesize, ranging from 0 to 1.
Synthetic Accessibility Score:	6.49	Fsp³:	0.907
MCE-18:	275.699 ? MCE-18 stands for medicinal chemistry evolution.MCE-18≥45 is considered a suitable value.	Lipinski Rule-of-5:	Accepted
Pfizer Rule:	Rejected	GSK Rule:	Accepted
Golden Triangle Rule:	Accepted	BMS Rule:	1
Chelating Alert:	0	PAINS Alert:	0
Colloidal aggregators:	0.717	Fluc inhibitor:	0.0 ? The fluc inhibitor value is the probability of being fLuc inhibitors, within the range of 0 to 1.
Blue fluorescence:	0.026 ? The blue fluorescence value is the probability of being blue fluorescence, within the range of 0 to 1	Green fluorescence:	0.0 ? The green fluorescence value is the probability of being green fluorescence, within the range of 0 to 1
Reactive compounds:	0.392	Promiscuous compounds:	0.174

ADMET Properties (ADMETlab3.0)

ADMET: Absorption

Caco-2 Permeability:	-6.115	MDCK Permeability:	-5.241
Pgp-inhibitor:	0.0	Pgp-substrate:	0.81
PAMPA:	0.999 ? The experimental data for Peff was logarithmically transformed (logPeff). Molecules with log Peff values below 2.0 were classified as low-permeability (Category 0), while those with log Peff values exceeding 2.5 were classified as high-permeability (Category 1).	Human Intestinal Absorption (HIA):	0.056
20% Bioavailability (F20%):	0.003	30% Bioavailability (F30%):	0.992
50% Bioavailability (F50%):	0.994

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB):	0.032	MRP1:	0.001
Plasma Protein Binding (PPB):	64.168%	Volume Distribution (VD):	-0.562
Fu:	32.176% ? The fraction unbound in plasms.	OATP1B1 inhibitor:	1.0
OATP1B3 inhibitor:	1.0	BCRP inhibitor:	0.006
BSEP inhibitor:	0.0

ADMET: Metabolism

CYP1A2-inhibitor:	0.0	CYP1A2-substrate:	0.0
CYP2C19-inhibitor:	0.0	CYP2C19-substrate:	0.0
CYP2C9-inhibitor:	0.0	CYP2C9-substrate:	0.0
CYP2D6-inhibitor:	0.0	CYP2D6-substrate:	0.111
CYP3A4-inhibitor:	0.34	CYP3A4-substrate:	0.538
CYP2B6-substrate:	0.0	CYP2C8-inhibitor:	0.075
HLM stability:	0.208 ? Human liver microsomal (HLM) stability. Category 0: stable+ (HLM > 30 min); Category 1: unstable- (HLM ≤ 30 min). The output value is the probability of human liver microsomal instability, where a value closer to 1 indicates a higher likelihood of instability.

ADMET: Excretion

Clearance (CL):

-0.448

Half-life (T1/2):

4.848

ADMET: Toxicity

hERG Blockers:	0.003	hERG Blockers (10um):	0.011
Human Hepatotoxicity (H-HT):	0.446	Drug-induced Liver Injury (DILI):	0.98
AMES Toxicity:	0.96	Rat Oral Acute Toxicity:	0.001
Maximum Recommended Daily Dose:	0.001	Skin Sensitization:	1.0
Carcinogencity:	0.024	Eye Corrosion:	0.0
Eye Irritation:	0.0	Respiratory Toxicity:	0.0
Drug-induced Neurotoxicity:	0.0	Ototoxicity:	1.0
Hematotoxicity:	0.582	Drug-induced Nephrotoxicity:	0.993
Genotoxicity:	0.423	RPMI-8226 Immunitoxicity:	0.346
A549 Cytotoxicity:	0.588	Hek293 Cytotoxicity:	0.383
BCF:	0.734 ? Bioconcentration factors are used for considering secondary poisoning potential and assessing risks to human health via the food chain. The unit is -log10[(mg/L)/(1000*MW)].	IGC50:	3.398 ? 48 hour Tetrahymena pyriformis IGC50. The unit of IGC50 is -log10[(mg/L)/(1000*MW)].
LC50DM:	5.069 ? 48 hour Daphnia magna LC50. The unit of LC50DM is -log10[(mg/L)/(1000*MW)].	LC50FM:	4.075 ? 96 hour fathead minnow LC50. The unit of LC50FM is -log10[(mg/L)/(1000*MW)].

Species Source

Organism ID	Organism Name	Taxonomy Level	Family	SuperKingdom	Isolation Part	Collection Location	Collection Time	Reference
NPO23938	Pentamera calcigera	Species	Phyllophoridae	Eukaryota	n.a.	n.a.	n.a.	PMID[10650081]
NPO23938	Pentamera calcigera	Species	Phyllophoridae	Eukaryota	n.a.	n.a.	n.a.	Database[COCONUT]
NPO23938	Pentamera calcigera	Species	Phyllophoridae	Eukaryota	n.a.	n.a.	n.a.	Database[UNPD]

Note for Reference:
In addition to directly collecting NP source organism data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated them from below databases:
☉ UNPD: Universal Natural Products Database [PMID: 23638153].
☉ StreptomeDB: a database of streptomycetes natural products [PMID: 33051671].
☉ TM-MC: a database of medicinal materials and chemical compounds in Northeast Asian traditional medicine [PMID: 26156871].
☉ TCM@Taiwan: a Traditional Chinese Medicine database [PMID: 21253603].
☉ TCMID: a Traditional Chinese Medicine database [PMID: 29106634].
☉ TCMSP: The traditional Chinese medicine systems pharmacology database and analysis platform [PMID: 24735618].
☉ HerDing: a herb recommendation system to treat diseases using genes and chemicals [PMID: 26980517].
☉ MetaboLights: a metabolomics database [PMID: 27010336].
☉ FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

NP Quantity Composition/Concentration

Organism ID	Organism Name	Organism Material Preparation	Organism Part	NP Quantity (Standard)	NP Quantity (Minimum)	NP Quantity (Maximum)	Quantity Unit	Reference

Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP quantitative records for specific NP domains (e.g., NPS from foods or herbs) from domain-specific databases. These databases include:
☉ DUKE: Dr. Duke's Phytochemical and Ethnobotanical Databases.
☉ PHENOL EXPLORER: is the first comprehensive database on polyphenol content in foods [PMID: 24103452], its homepage can be accessed at here.
☉ FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

Biological Activity

Activity Type	# Activity
IC50	4

Activity Type	# Activity
Cell line	3
Non-molecular	1

Molecular-level activity

Target ID	Target Type	Target Name	Target Organism	Activity Type	Activity Relation	Value	Unit	Reference

In vitro activity

Target ID	Target Type	Target Name	Target Organism	Activity Type	Activity Relation	Value	Unit	Reference
NPT168	Cell line	P388	Mus musculus	IC50	=	5.0	ug.mL-1	PMID[10650081]
NPT81	Cell line	A549	Homo sapiens	IC50	=	5.0	ug.mL-1	PMID[10650081]
NPT139	Cell line	HT-29	Homo sapiens	IC50	=	5.0	ug.mL-1	PMID[10650081]
NPT20529	Non-molecular	NON-PROTEIN TARGET	n.a.	IC50	=	5.0	ug.mL-1	PMID[10650081]

In vivo activity

Target ID	Target Type	Target Name	Target Organism	Activity Type	Activity Relation	Value	Unit	Reference

Experimental ADME

Experiment Model	Experiment Tissue	ADME Type	ADME Relation	ADME Value	ADME Unit	Reference

Experimental Toxicity

Quantitative toxicity

Experiment Model	Experiment Organism	Toxicity Type	Toxicity Relation	Toxicity Value	Toxicity Unit	Reference

Common Abbreviations:
LC: Lethal Concentration; LD: Lethal Dose; LT:Lethal Time; NOAEL: No-observed-adverse-effect Level; BMDL: Benchmark Dose Lower Confidence Limit; BMD: Benchmark Dose; BMC:Benchmark Concentration; LOAEL: Lowest Observed Adverse Effect Level; RfD:Reference Dose; RfC:Reference Concentration; MRL: Minimal Risk Level; MEG: Maximum Exposure Guideline; PAC: Protective Action Criteria

Categorical toxicity labels

Hepatotoxicity	Carcinogenicity	Mutagenicity	Cardiotoxicity	Respiratory Toxicity	Eye Irritation	Endocrine Disruption

Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP toxicity records from domain-specific databases. These databases include:
☉ ToxValDB: a curated database that compiles quantitative toxicity values for chemicals from diverse public sources to support toxicological research and risk assessment.
☉ TOXRIC: a comprehensive, free-to-access, online database providing toxicological/feature data. The toxicity labels are retrieved from this database. [PMID: 36400569]

Chemically structural similarity

Similar Active Natural Products in NPASS

Top-200 similar NPs were calculated against the active-NP-set (includes approximately 50,000 NPs with experimentally-derived bioactivity available in NPASS)

Similarity is measured using the Tanimoto coefficient (Tc) , which compares the binary fingerprints of two molecules. Tc is calculated as the intersection divided by the union of '1' bits in the fingerprints, ranging from 0 to 1, with 1 indicating highest similarity.

● The left chart: Distribution of similarity level between NPC484545 and all remaining natural products in the NPASS database.
● The right table: Most similar natural products (Tc>=0.5 or Top200).

range	Tanimoto Coefficient
0-0.1	23251
0.1-0.2	23334
0.2-0.3	2225
0.3-0.4	803
0.4-0.5	218
0.5-0.6	20
0.6-0.7	2
0.7-0.8	0
0.8-0.85	0
0.85-0.9	0
0.9-0.95	1
0.95-1	0

Similarity Score	Similarity Level	Natural Product ID
0.9439	High Similarity	NPC484546
0.6535	Remote Similarity	NPC484547
0.6331	Remote Similarity	NPC481606
0.5786	Remote Similarity	NPC610857
0.5775	Remote Similarity	NPC481603
0.5734	Remote Similarity	NPC481605
0.5503	Remote Similarity	NPC481604
0.5455	Remote Similarity	NPC485319
0.5448	Remote Similarity	NPC485273
0.541	Remote Similarity	NPC603546
0.5347	Remote Similarity	NPC8524
0.5324	Remote Similarity	NPC293330
0.5317	Remote Similarity	NPC603580
0.5315	Remote Similarity	NPC485318
0.531	Remote Similarity	NPC33012
0.5241	Remote Similarity	NPC485315
0.5149	Remote Similarity	NPC475287
0.5111	Remote Similarity	NPC484522
0.5109	Remote Similarity	NPC471550
0.5102	Remote Similarity	NPC485317
0.5068	Remote Similarity	NPC275225
0.5037	Remote Similarity	NPC484521
0.5036	Remote Similarity	NPC85154

Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

● The left chart: Distribution of similarity level between NPC484545 and all drugs/candidates.
● The right table: Most similar clinical/approved drugs (Tc>=0.5 or Top200).

range	Tanimoto Coefficient
0-0.1	7430
0.1-0.2	1679
0.2-0.3	39
0.3-0.4	2
0.4-0.5	0
0.5-0.6	0
0.6-0.7	0
0.7-0.8	0
0.8-0.85	0
0.85-0.9	0
0.9-0.95	0
0.95-1	0

Similarity Score	Similarity Level	Drug ID	Developmental Stage
		NPD

Bioactivity similarity

Similar Natural Products in NPASS

Similarity level is defined by Bioactivity similarity was calculated based on bioactivity descriptors of compounds. The bioactivity descriptors were calculated by a recently developed AI algorithm Chemical Checker (CC) [Nature Biotechnology, 38:1087–1096, 2020; Nature Communications, 12:3932, 2021], which evaluated bioactivity similarities at five levels:
☉ A: chemistry similarity;
☉ B: biological targets similarity;
☉ C: networks similarity;
☉ D: cell-based bioactivity similarity;
☉ E: similarity based on clinical data.
Those 5 categories of CC bioactivity descriptors were calculated and then subjected to manifold projection using UMAP algorithm, to project all NPs on a 2-Dimensional space. The current NP was highlighted with a small circle in the 2-D map. Below figures: left-to-right, A-to-E.

A: chemistry similarity

B: biological targets similarity

C: networks similarity

D: cell-based bioactivity similarity

E: similarity based on clinical data