NPASS Compound

Structure

CID183816 OpenBabel06191715562D 129141 0 0 1 0 0 0 0 0999 V2000 -9.3278 -4.4062 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -11.9069 -3.7855 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 7.6318 10.2812 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 2.8972 -6.7716 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -3.8815 0.8480 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -4.3711 0.0000 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 3.8815 1.1104 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 4.3711 1.9583 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -7.9902 -3.7855 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 0.8480 2.4479 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 0.8480 -1.4687 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 0.8480 -0.4896 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -9.3278 -3.4271 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -7.6318 -1.4687 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -6.7839 -0.9792 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -0.8480 1.4688 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 0.0000 1.9583 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 2.5439 0.4896 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 2.5439 3.4271 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -7.6318 -2.4479 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 1.6960 2.9375 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 1.6960 -0.0000 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -2.5439 0.4896 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -0.0000 -0.9792 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -2.5439 -1.4687 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.9359 -2.4479 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 4.4178 -1.0968 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -1.7639 -4.5089 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 7.6796 -4.3875 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 10.1758 5.8750 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 5.9359 6.3646 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -11.4173 -2.9375 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0 7.6318 9.3021 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0 3.1507 -5.8258 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 -5.9359 -1.4687 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -0.8480 0.4896 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -1.6960 0.0000 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 10.1758 4.8958 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0 5.1102 -1.7892 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0 -0.8181 -4.2555 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0 7.0634 -5.1484 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 5.0879 5.8750 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0 2.5439 1.4687 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 0.8480 1.4687 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0 -0.8480 -1.4687 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0 3.3919 2.9375 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 -3.3919 -0.9792 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 -11.9069 -2.0895 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0 8.4798 8.8125 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 9.3278 4.4062 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 6.0560 -1.5357 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0 -0.1257 -4.9479 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0 7.3168 -6.0942 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 4.2399 6.3646 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0 -11.4173 -1.2415 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 6.7483 -2.2281 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 3.3919 5.8750 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 8.4798 7.8333 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 0.8201 -4.6945 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 8.4798 4.8958 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0 6.4956 -6.6275 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0 3.3919 4.8958 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0 6.4949 -3.1739 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0 -10.4382 -1.2415 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0 3.6575 -3.9342 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0 4.0965 -5.5724 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 4.3499 -4.6266 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 7.6318 7.3437 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0 1.0735 -3.7487 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0 -5.0879 -0.9792 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 8.4798 5.8750 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 4.2399 4.4062 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 5.7346 -6.0113 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 5.5491 -3.4273 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 2.7117 -4.1876 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 -9.9486 -2.0895 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 6.7839 7.8333 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0 0.3812 -3.0563 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 -0.7502 -0.7257 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -3.3919 0.0000 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 3.3919 1.9583 0.0000 C 0 0 0 0 0 0 0 0 0 0 0 0 -8.4798 -2.9375 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 1.6960 1.9583 0.0000 C 0 0 2 0 0 0 0 0 0 0 0 0 0.8480 0.4896 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 -0.0000 -0.0000 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 -1.6960 -0.9792 0.0000 C 0 0 1 0 0 0 0 0 0 0 0 0 -5.0879 -2.9375 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 4.6712 -0.1510 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 -2.0173 -5.4548 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 8.6467 -4.5407 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 11.0238 4.4062 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 -0.8480 -2.4479 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 -12.8861 -2.0895 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 9.3278 9.3021 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 9.3278 3.4271 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 6.3094 -0.5899 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 -0.3791 -5.8937 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 8.2309 -6.4451 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 4.2399 7.3437 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 -11.9069 -0.3936 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 7.6942 -1.9747 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 2.5439 6.3646 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 9.3278 7.3437 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 1.5125 -5.3868 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 7.6318 4.4062 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 6.4444 -7.6054 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 2.5439 4.4062 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 7.1873 -3.8663 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 -9.9486 -0.3936 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 3.9109 -2.9884 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 -5.0879 0.0000 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 -0.2433 1.1659 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 9.3278 6.3646 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 5.9359 7.3437 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 -10.4382 -2.9375 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 6.7839 8.8125 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 2.4583 -5.1334 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 4.8567 -2.7350 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 6.0855 -5.0972 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 -0.5646 -3.3097 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 5.0879 4.8958 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 -4.2399 -1.4687 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 4.2399 3.4271 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 4.7888 -6.2647 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 5.2957 -4.3731 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 7.6318 6.3646 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 2.0193 -3.4952 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 0.6346 -2.1105 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 -8.9694 -2.0895 0.0000 O 0 0 0 0 0 0 0 0 0 0 0 0 1 13 2 0 0 0 0 5 80 1 0 0 0 0 6 80 1 0 0 0 0 7 81 1 0 0 0 0 8 81 1 0 0 0 0 11 84 1 0 0 0 0 13 82 1 0 0 0 0 14 15 1 0 0 0 0 14 20 1 0 0 0 0 15 35 2 0 0 0 0 16 17 1 0 0 0 0 16 36 2 0 0 0 0 17 44 1 0 0 0 0 18 22 1 0 0 0 0 18 43 1 0 0 0 0 19 21 1 0 0 0 0 19 46 1 0 0 0 0 20 82 1 0 0 0 0 21 83 1 0 0 0 0 22 84 1 0 0 0 0 23 37 1 0 0 0 0 23 80 1 0 0 0 0 24 45 1 0 0 0 0 24 85 1 0 0 0 0 25 47 1 0 0 0 0 25 86 1 0 0 0 0 26 35 1 0 0 0 0 26 87 1 0 0 0 0 27 88 1 0 0 0 0 28 89 1 0 0 0 0 29 90 1 0 0 0 0 30 38 1 0 0 0 0 30113 1 0 0 0 0 31114 1 0 0 0 0 32 2 1 6 0 0 0 32 48 1 0 0 0 0 32115 1 0 0 0 0 33 3 1 6 0 0 0 33 49 1 0 0 0 0 33116 1 0 0 0 0 34 4 1 6 0 0 0 34 66 1 0 0 0 0 34117 1 0 0 0 0 35 70 1 0 0 0 0 36 37 1 0 0 0 0 36 85 1 0 0 0 0 37 86 1 1 0 0 0 38 50 1 0 0 0 0 38 91 1 1 0 0 0 39 27 1 6 0 0 0 39 51 1 0 0 0 0 39118 1 0 0 0 0 40 28 1 1 0 0 0 40 52 1 0 0 0 0 40120 1 0 0 0 0 41 29 1 1 0 0 0 41 53 1 0 0 0 0 41119 1 0 0 0 0 42 31 1 1 0 0 0 42 54 1 0 0 0 0 42121 1 0 0 0 0 43 81 1 0 0 0 0 43 83 1 6 0 0 0 44 83 1 6 0 0 0 44 84 1 0 0 0 0 45 86 1 1 0 0 0 45 92 1 0 0 0 0 46 81 1 0 0 0 0 46123 1 6 0 0 0 47 80 1 0 0 0 0 47122 1 6 0 0 0 48 55 1 0 0 0 0 48 93 1 1 0 0 0 49 58 1 0 0 0 0 49 94 1 6 0 0 0 50 60 1 0 0 0 0 50 95 1 6 0 0 0 51 56 1 0 0 0 0 51 96 1 1 0 0 0 52 59 1 0 0 0 0 52 97 1 6 0 0 0 53 61 1 0 0 0 0 53 98 1 6 0 0 0 54 57 1 0 0 0 0 54 99 1 6 0 0 0 55 64 1 0 0 0 0 55100 1 6 0 0 0 56 63 1 0 0 0 0 56101 1 6 0 0 0 57 62 1 0 0 0 0 57102 1 1 0 0 0 58 68 1 0 0 0 0 58103 1 6 0 0 0 59 69 1 0 0 0 0 59104 1 1 0 0 0 60 71 1 0 0 0 0 60105 1 1 0 0 0 61 73 1 0 0 0 0 61106 1 1 0 0 0 62 72 1 0 0 0 0 62107 1 6 0 0 0 63 74 1 0 0 0 0 63108 1 1 0 0 0 64 76 1 0 0 0 0 64109 1 1 0 0 0 65 67 1 0 0 0 0 65 75 1 0 0 0 0 65110 1 6 0 0 0 66 67 1 0 0 0 0 66124 1 1 0 0 0 67125 1 6 0 0 0 68 77 1 0 0 0 0 68126 1 1 0 0 0 69 78 1 0 0 0 0 69127 1 6 0 0 0 70111 2 0 0 0 0 70122 1 0 0 0 0 71113 1 0 0 0 0 71126 1 6 0 0 0 72121 1 0 0 0 0 72123 1 1 0 0 0 73119 1 0 0 0 0 73124 1 6 0 0 0 74118 1 0 0 0 0 74125 1 6 0 0 0 75117 1 0 0 0 0 75127 1 1 0 0 0 76115 1 0 0 0 0 76129 1 6 0 0 0 77114 1 6 0 0 0 77116 1 0 0 0 0 78120 1 0 0 0 0 78128 1 1 0 0 0 79112 2 0 0 0 0 79128 1 0 0 0 0 82 9 1 6 0 0 0 82129 1 0 0 0 0 83 10 1 6 0 0 0 84 85 1 1 0 0 0 85 12 1 1 0 0 0 86 79 1 6 0 0 0 M END $$$$

Physi-Chem Properties

Molecular Weight:	1858.86
Volume:	1749.575
LogP:	1.019
LogD:	0.659
LogS:	-2.306
# Rotatable Bonds:	29
TPSA:	676.57
# H-Bond Aceptor:	43
# H-Bond Donor:	24
# Rings:	13
# Heavy Atoms:	43

MedChem Properties

QED Drug-Likeness Score:	0.021
Synthetic Accessibility Score:	8.319
Fsp3:	0.907
Lipinski Rule-of-5:	Rejected
Pfizer Rule:	Accepted
GSK Rule:	Rejected
BMS Rule:	1
Golden Triangle Rule:	Rejected
Chelating Alert:	0
PAINS Alert:	0

ADMET Properties (ADMETlab2.0)

ADMET: Absorption

Caco-2 Permeability:	-6.643
MDCK Permeability:	0.0040026698261499405
Pgp-inhibitor:	0.001
Pgp-substrate:	1.0
Human Intestinal Absorption (HIA):	1.0
20% Bioavailability (F20%):	0.001
30% Bioavailability (F30%):	1.0

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB):	0.498
Plasma Protein Binding (PPB):	38.72496032714844%
Volume Distribution (VD):	-0.695
Pgp-substrate:	20.10995864868164%

ADMET: Metabolism

CYP1A2-inhibitor:	0.0
CYP1A2-substrate:	0.024
CYP2C19-inhibitor:	0.0
CYP2C19-substrate:	0.049
CYP2C9-inhibitor:	0.0
CYP2C9-substrate:	0.0
CYP2D6-inhibitor:	0.0
CYP2D6-substrate:	0.013
CYP3A4-inhibitor:	0.042
CYP3A4-substrate:	0.0

ADMET: Excretion

Clearance (CL):	-2.076
Half-life (T1/2):	0.797

ADMET: Toxicity

hERG Blockers:	0.125
Human Hepatotoxicity (H-HT):	0.078
Drug-inuced Liver Injury (DILI):	0.017
AMES Toxicity:	0.032
Rat Oral Acute Toxicity:	0.038
Maximum Recommended Daily Dose:	0.311
Skin Sensitization:	0.129
Carcinogencity:	0.01
Eye Corrosion:	0.003
Eye Irritation:	0.003
Respiratory Toxicity:	0.064

Download Data

Data Type	Select
General Info & Identifiers & Properties
Structure MOL file
Source Organisms
Biological Activities
Similar NPs/Drugs

Natural Product: NPC183816

Natural Product ID:	NPC183816
*Common Name:**	Prosapogenin 10
IUPAC Name:	[(2S,3R,4S,5S,6R)-3-[(2S,3R,4S,5S,6S)-5-[(2S,3R,4R,5S)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy-3-hydroxy-6-methyl-4-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]oxy-4,5-dihydroxy-6-(hydroxymethyl)oxan-2-yl] (3S,4aR,5R,6aR,6aS,6bR,8aR,10S,12aR,14bS)-10-[(2R,3R,4S,5S,6R)-6-[[(2R,3R,4S,5R,6R)-4,5-dihydroxy-6-methyl-3-[(2S,3R,4S,5R)-3,4,5-trihydroxyoxan-2-yl]oxyoxan-2-yl]oxymethyl]-3,4,5-trihydroxyoxan-2-yl]oxy-5-hydroxy-3-[(2E,6S)-2-(hydroxymethyl)-6-methyl-6-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyocta-2,7-dienoyl]oxy-2,2,6a,6b,9,9,12a-heptamethyl-1,3,4,5,6,6a,7,8,8a,10,11,12,13,14b-tetradecahydropicene-4a-carboxylate
Synonyms:	prosapogenin 10
Standard InCHIKey:	XSYZYNNFQKBTTB-JUWYEDLKSA-N
Standard InCHI:	InChI=1S/C86H138O43/c1-13-82(9,129-76-64(109)55(100)48(93)32(2)115-76)20-14-15-35(26-87)70(111)122-47-25-86(79(112)128-78-69(59(104)52(97)40(28-89)120-78)127-75-65(110)67(125-74-63(108)56(101)51(96)39(27-88)118-74)66(34(4)117-75)124-73-61(106)53(98)41(29-90)119-73)37(23-80(47,5)6)36-16-17-44-83(10)21-19-46(81(7,8)43(83)18-22-84(44,11)85(36,12)24-45(86)92)123-72-62(107)57(102)54(99)42(121-72)31-114-77-68(58(103)49(94)33(3)116-77)126-71-60(105)50(95)38(91)30-113-71/h13,15-16,32-34,37-69,71-78,87-110H,1,14,17-31H2,2-12H3/b35-15+/t32-,33-,34+,37+,38-,39-,40-,41+,42-,43+,44-,45-,46+,47+,48-,49+,50+,51-,52-,53+,54-,55+,56+,57+,58+,59+,60-,61-,62-,63-,64-,65-,66+,67+,68-,69-,71+,72+,73+,74+,75+,76+,77-,78+,82-,83+,84-,85-,86-/m1/s1
SMILES:	OC[C@H]1O[C@@H](OC(=O)[C@@]23C[C@H](OC(=O)/C(=C/CC[C@](O[C@@H]4O[C@H](C)[C@H]([C@@H]([C@H]4O)O)O)(C=C)C)/CO)C(C[C@H]3C3=CC[C@H]4[C@@]([C@@]3(C[C@H]2O)C)(C)CC[C@@H]2[C@]4(C)CC[C@@H](C2(C)C)O[C@@H]2O[C@H](CO[C@@H]3O[C@H](C)[C@@H]([C@@H]([C@H]3O[C@@H]3OC[C@H]([C@@H]([C@H]3O)O)O)O)O)[C@H]([C@@H]([C@H]2O)O)O)(C)C)[C@@H]([C@H]([C@@H]1O)O)O[C@@H]1O[C@@H](C)[C@@H]([C@H]([C@H]1O)O[C@@H]1O[C@H](CO)[C@H]([C@@H]([C@H]1O)O)O)O[C@@H]1O[C@H]([C@@H]([C@H]1O)O)CO
Synthetic Gene Cluster:	n.a.
ChEMBL Identifier:	CHEMBL506394
PubChem CID:	44566623
Chemical Classification:**	CHEMONTID:0000000 [Organic compounds] [CHEMONTID:0000012] Lipids and lipid-like molecules [CHEMONTID:0000259] Prenol lipids [CHEMONTID:0002049] Terpene glycosides [CHEMONTID:0001580] Triterpene glycosides [CHEMONTID:0002358] Triterpene saponins

*Note: the InCHIKey will be temporarily assigned as the "Common Name" if no IUPAC name or alternative short name is available.
**Note: the Chemical Classification was calculated by NPClassifier Version 1.5. Reference: PMID:34662515.

Species Source

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Organism ID	Organism Name	Taxonomy Level	Family	SuperKingdom	Isolation Part	Collection Location	Collection Time	Reference
NPO12181	Albizia julibrissin	Species	Fabaceae	Eukaryota	n.a.	n.a.	n.a.	PMID[9051910]
NPO12181	Albizia julibrissin	Species	Fabaceae	Eukaryota	n.a.	stem	n.a.	PMID[15577257]
NPO12181	Albizia julibrissin	Species	Fabaceae	Eukaryota	n.a.	bark	n.a.	PMID[15283458]
NPO12181	Albizia julibrissin	Species	Fabaceae	Eukaryota	n.a.	n.a.	n.a.	Database[UNPD]
NPO12181	Albizia julibrissin	Species	Fabaceae	Eukaryota	n.a.	n.a.	n.a.	Database[TM-MC]
NPO12181	Albizia julibrissin	Species	Fabaceae	Eukaryota	n.a.	n.a.	n.a.	Database[TCMID]
NPO12181	Albizia julibrissin	Species	Fabaceae	Eukaryota	n.a.	n.a.	n.a.	Database[TCM_Taiwan]

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☑ Note for Reference:
In addition to directly collecting NP source organism data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated them from below databases:
☉ UNPD: Universal Natural Products Database [PMID: 23638153].
☉ StreptomeDB: a database of streptomycetes natural products [PMID: 33051671].
☉ TM-MC: a database of medicinal materials and chemical compounds in Northeast Asian traditional medicine [PMID: 26156871].
☉ TCM@Taiwan: a Traditional Chinese Medicine database [PMID: 21253603].
☉ TCMID: a Traditional Chinese Medicine database [PMID: 29106634].
☉ TCMSP: The traditional Chinese medicine systems pharmacology database and analysis platform [PMID: 24735618].
☉ HerDing: a herb recommendation system to treat diseases using genes and chemicals [PMID: 26980517].
☉ MetaboLights: a metabolomics database [PMID: 27010336].
☉ FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

NP Quantity Composition/Concentration

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Organism ID	NP ID	Organism Material Preparation	Organism Part	NP Quantity (Standard)	NP Quantity (Minimum)	NP Quantity (Maximum)	Quantity Unit	Reference
No data available in table

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☑ Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP quantitative records for specific NP domains (e.g., NPS from foods or herbs) from domain-specific databases. These databases include:
☉ DUKE: Dr. Duke's Phytochemical and Ethnobotanical Databases.
☉ PHENOL EXPLORER: is the first comprehensive database on polyphenol content in foods [PMID: 24103452], its homepage can be accessed at here.
☉ FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

Biological Activity

Activity Type	# Activity
IC50	6
Others	1

Activity Type	# Activity
Cell Line	6
Others	1

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Target ID	Target Type	Target Name	Target Organism	Activity Type	Activity Relation	Value	Unit	Reference
NPT180	Cell Line	HCT-8	Homo sapiens	IC50	>	10000.0	nM	PMID[530477]
NPT181	Cell Line	Bel-7402	Homo sapiens	IC50	>	10000.0	nM	PMID[530477]
NPT547	Cell Line	BGC-823	Homo sapiens	IC50	>	10000.0	nM	PMID[530477]
NPT81	Cell Line	A549	Homo sapiens	IC50	>	10000.0	nM	PMID[530477]
NPT179	Cell Line	A2780	Homo sapiens	IC50	>	10000.0	nM	PMID[530477]
NPT27	Others	Unspecified		HC50	=	127.9	uM	PMID[530477]
NPT91	Cell Line	KB	Homo sapiens	IC50	=	2000.0	nM	PMID[530476]

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☑ Note for Activity Records:
☉ The quantitative biological activities were primarily integrated from ChEMBL (Version-30) database and were also directly collected from PubMed literature. PubMed PMID was provided as the reference link for each activity record.

Chemically structural similarity: I. Similar Active Natural Products in NPASS

Top-200 similar NPs were calculated against the active-NP-set (includes 4,3285 NPs with experimentally-derived bioactivity available in NPASS)

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

● The left chart: Distribution of similarity level between NPC183816 and all remaining natural products in the NPASS database.
● The right table: Most similar natural products (Tc>=0.56 or Top200).

range	Tanimoto Coefficient
0-0.1	284
0.1-0.2	1580
0.2-0.3	4462
0.3-0.4	8075
0.4-0.5	11829
0.5-0.6	7879
0.6-0.7	5005
0.7-0.8	2329
0.8-0.85	625
0.85-0.9	537
0.9-0.95	59
0.95-1	33

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Similarity Score	Similarity Level	Natural Product ID
1.0	High Similarity	NPC475177
1.0	High Similarity	NPC322904
1.0	High Similarity	NPC233223
1.0	High Similarity	NPC475444
1.0	High Similarity	NPC473679

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Chemically structural similarity: II. Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

● The left chart: Distribution of similarity level between NPC183816 and all drugs/candidates.
● The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

range	Tanimoto Coefficient
0-0.1	251
0.1-0.2	1724
0.2-0.3	3829
0.3-0.4	2177
0.4-0.5	653
0.5-0.6	314
0.6-0.7	155
0.7-0.8	26
0.8-0.85	17
0.85-0.9	4
0.9-0.95	0
0.95-1	0

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Similarity Score	Similarity Level	Drug ID	Developmental Stage
0.8492	Intermediate Similarity	NPD8328	Phase 3
0.848	Intermediate Similarity	NPD8516	Approved
0.848	Intermediate Similarity	NPD8517	Approved
0.848	Intermediate Similarity	NPD8515	Approved
0.8333	Intermediate Similarity	NPD8513	Phase 3

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Bioactivity similarity: Similar Natural Products in NPASS

Bioactivity similarity was calculated based on bioactivity descriptors of compounds. The bioactivity descriptors were calculated by a recently developed AI algorithm Chemical Checker (CC) [Nature Biotechnology, 38:1087–1096, 2020; Nature Communications, 12:3932, 2021], which evaluated bioactivity similarities at five levels:
☉ A: chemistry similarity;
☉ B: biological targets similarity;
☉ C: networks similarity;
☉ D: cell-based bioactivity similarity;
☉ E: similarity based on clinical data.

Those 5 categories of CC bioactivity descriptors were calculated and then subjected to manifold projection using UMAP algorithm, to project all NPs on a 2-Dimensional space. The current NP was highlighted with a small circle in the 2-D map. Below figures: left-to-right, A-to-E.

A: chemistry similarity

B: biological targets similarity

C: networks similarity

D: cell-based bioactivity similarity

E: similarity based on clinical data