Structure

Physi-Chem Properties

Molecular Weight:  336.23
Volume:  352.775
LogP:  1.553
LogD:  1.85
LogS:  -3.105
# Rotatable Bonds:  2
TPSA:  77.76
# H-Bond Aceptor:  4
# H-Bond Donor:  3
# Rings:  4
# Heavy Atoms:  4

MedChem Properties

QED Drug-Likeness Score:  0.723
Synthetic Accessibility Score:  5.644
Fsp3:  0.95
Lipinski Rule-of-5:  Accepted
Pfizer Rule:  Accepted
GSK Rule:  Accepted
BMS Rule:  0
Golden Triangle Rule:  Accepted
Chelating Alert:  0
PAINS Alert:  0

ADMET Properties (ADMETlab2.0)

ADMET: Absorption

Caco-2 Permeability:  -5.681
MDCK Permeability:  7.231607014546171e-06
Pgp-inhibitor:  0.19
Pgp-substrate:  0.064
Human Intestinal Absorption (HIA):  0.008
20% Bioavailability (F20%):  0.014
30% Bioavailability (F30%):  0.934

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB):  0.358
Plasma Protein Binding (PPB):  87.25743865966797%
Volume Distribution (VD):  0.452
Pgp-substrate:  11.404633522033691%

ADMET: Metabolism

CYP1A2-inhibitor:  0.006
CYP1A2-substrate:  0.795
CYP2C19-inhibitor:  0.008
CYP2C19-substrate:  0.579
CYP2C9-inhibitor:  0.029
CYP2C9-substrate:  0.089
CYP2D6-inhibitor:  0.003
CYP2D6-substrate:  0.117
CYP3A4-inhibitor:  0.604
CYP3A4-substrate:  0.067

ADMET: Excretion

Clearance (CL):  1.901
Half-life (T1/2):  0.48

ADMET: Toxicity

hERG Blockers:  0.036
Human Hepatotoxicity (H-HT):  0.654
Drug-inuced Liver Injury (DILI):  0.026
AMES Toxicity:  0.005
Rat Oral Acute Toxicity:  0.016
Maximum Recommended Daily Dose:  0.549
Skin Sensitization:  0.667
Carcinogencity:  0.559
Eye Corrosion:  0.075
Eye Irritation:  0.161
Respiratory Toxicity:  0.948

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  Natural Product: NPC180199

Natural Product ID:  NPC180199
Common Name*:   MRBLTWPEPGRXQN-WMUQSPHGSA-N
IUPAC Name:   n.a.
Synonyms:  
Standard InCHIKey:  MRBLTWPEPGRXQN-WMUQSPHGSA-N
Standard InCHI:  InChI=1S/C20H32O4/c1-17-7-3-8-18(2,16(22)23)14(17)6-9-19-10-13(4-5-15(17)19)20(24,11-19)12-21/h13-15,21,24H,3-12H2,1-2H3,(H,22,23)/t13-,14+,15+,17-,18-,19+,20-/m1/s1
SMILES:  OC[C@]1(O)C[C@@]23C[C@H]1CC[C@H]3[C@]1([C@H](CC2)[C@@](C)(CCC1)C(=O)O)C
Synthetic Gene Cluster:   n.a.
ChEMBL Identifier:   CHEMBL482613
PubChem CID:   469209
Chemical Classification**:  
  • CHEMONTID:0000000 [Organic compounds]
    • [CHEMONTID:0000012] Lipids and lipid-like molecules
      • [CHEMONTID:0000259] Prenol lipids
        • [CHEMONTID:0001551] Diterpenoids
          • [CHEMONTID:0003782] Kaurane diterpenoids

*Note: the InCHIKey will be temporarily assigned as the "Common Name" if no IUPAC name or alternative short name is available.
**Note: the Chemical Classification was calculated by NPClassifier Version 1.5. Reference: PMID:34662515.

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO30302 Helianthus Genus Asteraceae Eukaryota n.a. n.a. n.a. DOI[10.1016/S0031-9422(00)80485-9]
NPO15810 Zea mays Species Poaceae Eukaryota n.a. n.a. DOI[10.1021/jf00055a023]
NPO6333 Annona glabra Species Annonaceae Eukaryota n.a. stem wood n.a. DOI[10.1021/np100247r]
NPO9632 Annona reticulata Species Annonaceae Eukaryota n.a. stem n.a. DOI[10.1021/np50053a043]
NPO19242 Eucalyptus albens Species Myrtaceae Eukaryota flowers n.a. n.a. PMID[10075775]
NPO6333 Annona glabra Species Annonaceae Eukaryota n.a. n.a. n.a. PMID[10395501]
NPO6333 Annona glabra Species Annonaceae Eukaryota n.a. n.a. n.a. PMID[10425140]
NPO11164 Renealmia alpinia Species Zingiberaceae Eukaryota n.a. n.a. n.a. PMID[10479331]
NPO2884 Annona squamosa Species Annonaceae Eukaryota seeds n.a. n.a. PMID[11141125]
NPO15810 Zea mays Species Poaceae Eukaryota n.a. seed n.a. PMID[11539687]
NPO2884 Annona squamosa Species Annonaceae Eukaryota n.a. n.a. n.a. PMID[12398544]
NPO15810 Zea mays Species Poaceae Eukaryota n.a. n.a. n.a. PMID[12713418]
NPO19436 Annona cherimola Species Annonaceae Eukaryota Seeds n.a. n.a. PMID[15387664]
NPO6333 Annona glabra Species Annonaceae Eukaryota Fruits n.a. n.a. PMID[15568797]
NPO2884 Annona squamosa Species Annonaceae Eukaryota n.a. n.a. n.a. PMID[18419154]
NPO19083 Alstonia angustiloba Species Apocynaceae Eukaryota n.a. n.a. n.a. PMID[18524603]
NPO2884 Annona squamosa Species Annonaceae Eukaryota n.a. n.a. n.a. PMID[19296389]
NPO6333 Annona glabra Species Annonaceae Eukaryota stem Taipei Botanical Garden, Taipei, Taiwan, China 2006-MAR PMID[20828184]
NPO15810 Zea mays Species Poaceae Eukaryota n.a. n.a. n.a. PMID[21080643]
NPO17759 Rhododendron mucronulatum Species Ericaceae Eukaryota n.a. stem n.a. PMID[21443171]
NPO15810 Zea mays Species Poaceae Eukaryota n.a. leaf n.a. PMID[21574561]
NPO15810 Zea mays Species Poaceae Eukaryota n.a. husk n.a. PMID[21574561]
NPO2884 Annona squamosa Species Annonaceae Eukaryota n.a. n.a. n.a. PMID[21910504]
NPO2884 Annona squamosa Species Annonaceae Eukaryota n.a. seed n.a. PMID[22011319]
NPO2884 Annona squamosa Species Annonaceae Eukaryota seeds n.a. n.a. PMID[22011319]
NPO15810 Zea mays Species Poaceae Eukaryota n.a. seed n.a. PMID[23292602]
NPO2884 Annona squamosa Species Annonaceae Eukaryota Barks n.a. n.a. PMID[2348205]
NPO18602 Melampodium leucanthum Species Asteraceae Eukaryota n.a. n.a. n.a. PMID[23501116]
NPO6333 Annona glabra Species Annonaceae Eukaryota fruits n.a. n.a. PMID[25499882]
NPO18602 Melampodium leucanthum Species Asteraceae Eukaryota leaves and branches San Antonio, Texas 2004-JUN PMID[25685941]
NPO18602 Melampodium leucanthum Species Asteraceae Eukaryota leaves and branches n.a. n.a. PMID[25685941]
NPO17296 Beesia calthifolia Species Ranunculaceae Eukaryota n.a. n.a. n.a. PMID[26238319]
NPO15810 Zea mays Species Poaceae Eukaryota n.a. n.a. n.a. PMID[29762032]
NPO18676 Clerodendrum trichotomum Species Lamiaceae Eukaryota Roots n.a. n.a. PMID[29924604]
NPO9632 Annona reticulata Species Annonaceae Eukaryota n.a. n.a. n.a. PMID[8277309]
NPO2884 Annona squamosa Species Annonaceae Eukaryota n.a. fruit n.a. PMID[8786370]
NPO15810 Zea mays Species Poaceae Eukaryota n.a. pollen n.a. PMID[8987503]
NPO2884 Annona squamosa Species Annonaceae Eukaryota bark n.a. n.a. PMID[9214729]
NPO11164 Renealmia alpinia Species Zingiberaceae Eukaryota n.a. Suriname rainforest n.a. PMID[9428162]
NPO6333 Annona glabra Species Annonaceae Eukaryota n.a. n.a. n.a. PMID[9584397]
NPO6333 Annona glabra Species Annonaceae Eukaryota n.a. n.a. n.a. PMID[9599260]
NPO15810 Zea mays Species Poaceae Eukaryota Husk Essent. Oil n.a. n.a. Database[FooDB]
NPO15810 Zea mays Species Poaceae Eukaryota Oil n.a. n.a. Database[FooDB]
NPO15810 Zea mays Species Poaceae Eukaryota Plant n.a. n.a. Database[FooDB]
NPO15810 Zea mays Species Poaceae Eukaryota Pollen Or Spore n.a. n.a. Database[FooDB]
NPO15810 Zea mays Species Poaceae Eukaryota Root n.a. n.a. Database[FooDB]
NPO19436 Annona cherimola Species Annonaceae Eukaryota Seed n.a. n.a. Database[FooDB]
NPO15810 Zea mays Species Poaceae Eukaryota Seed n.a. n.a. Database[FooDB]
NPO15810 Zea mays Species Poaceae Eukaryota Seed Essent. Oil n.a. n.a. Database[FooDB]
NPO15810 Zea mays Species Poaceae Eukaryota Shoot n.a. n.a. Database[FooDB]
NPO15810 Zea mays Species Poaceae Eukaryota n.a. n.a. Database[FooDB]
NPO15810 Zea mays Species Poaceae Eukaryota Silk Essent. Oil n.a. n.a. Database[FooDB]
NPO19436 Annona cherimola Species Annonaceae Eukaryota n.a. n.a. Database[FooDB]
NPO15810 Zea mays Species Poaceae Eukaryota Silk Stigma Style n.a. n.a. Database[FooDB]
NPO9632 Annona reticulata Species Annonaceae Eukaryota Bark n.a. n.a. Database[FooDB]
NPO15810 Zea mays Species Poaceae Eukaryota Stem n.a. n.a. Database[FooDB]
NPO15810 Zea mays Species Poaceae Eukaryota Cob n.a. n.a. Database[FooDB]
NPO9632 Annona reticulata Species Annonaceae Eukaryota n.a. n.a. Database[FooDB]
NPO19436 Annona cherimola Species Annonaceae Eukaryota Fruit n.a. n.a. Database[FooDB]
NPO2884 Annona squamosa Species Annonaceae Eukaryota n.a. n.a. Database[FooDB]
NPO9632 Annona reticulata Species Annonaceae Eukaryota Fruit n.a. n.a. Database[FooDB]
NPO19436 Annona cherimola Species Annonaceae Eukaryota n.a. n.a. Database[FooDB]
NPO15810 Zea mays Species Poaceae Eukaryota Fruit n.a. n.a. Database[FooDB]
NPO9632 Annona reticulata Species Annonaceae Eukaryota n.a. n.a. Database[FooDB]
NPO2884 Annona squamosa Species Annonaceae Eukaryota Fruit n.a. n.a. Database[FooDB]
NPO9632 Annona reticulata Species Annonaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO2884 Annona squamosa Species Annonaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO15810 Zea mays Species Poaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO1783 Euonymus fortunei Species Celastraceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO19769 Boschniakia rossica Species Orobanchaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO13737 Tephroseris kirilowii Species Asteraceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO6333 Annona glabra Species Annonaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO17759 Rhododendron mucronulatum Species Ericaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO18765 Juniperus scopulorum Species Cupressaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO2884 Annona squamosa Species Annonaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO18676 Clerodendrum trichotomum Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO1783 Euonymus fortunei Species Celastraceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO11967 Delphinium giraldii Species Ranunculaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO15810 Zea mays Species Poaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO13737 Tephroseris kirilowii Species Asteraceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO18765 Juniperus scopulorum Species Cupressaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO17296 Beesia calthifolia Species Ranunculaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO6333 Annona glabra Species Annonaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO13358 Piper brachystachyum Species Piperaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO9632 Annona reticulata Species Annonaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO14233 Ormosia dasycarpa Species Limoniidae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO17759 Rhododendron mucronulatum Species Ericaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO24402.1 Coffea liberica var. dewevrei Varieties Rubiaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO19769 Boschniakia rossica Species Orobanchaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO17759 Rhododendron mucronulatum Species Ericaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO15810 Zea mays Species Poaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO9632 Annona reticulata Species Annonaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO19769 Boschniakia rossica Species Orobanchaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO18765 Juniperus scopulorum Species Cupressaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO2884 Annona squamosa Species Annonaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO15810 Zea mays Species Poaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO15127 Senecio congestus Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO11646 Morella pensylvanica Species Myricaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18262 Aspergillus microcysticus Species Aspergillaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO12914 Sarcophyton flexuosum Species Alcyoniidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO17296 Beesia calthifolia Species Ranunculaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19083 Alstonia angustiloba Species Apocynaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO29531 Lupinus cosentinii Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO17499 Bursera kerberi Species Burseraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO11164 Renealmia alpinia Species Zingiberaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19572 Pellacalyx axillaris Species Rhizophoraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO9632 Annona reticulata Species Annonaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO17354 Micromonospora echinospora Species Micromonosporaceae Bacteria n.a. n.a. n.a. Database[UNPD]
NPO17230 Psidium acutangulum Species Myrtaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO11967 Delphinium giraldii Species Ranunculaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19709 Pseudocyphellaria australiensis Species Lobariaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO17759 Rhododendron mucronulatum Species Ericaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19242 Eucalyptus albens Species Myrtaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18424 Selinum libanotis Species Apiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO13358 Piper brachystachyum Species Piperaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19769 Boschniakia rossica Species Orobanchaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19371 Costasiella ocellifera Species Costasiellidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18348 Crotalaria stolzii Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO11081 Baccharis grandicapitulata Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18048 Phlomis crinita Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO8172 Emericellopsis minima Species n.a. Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO4679 Hedysarum gmelini Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO17630 Helenium integrifolium Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18533 Delisea elegans Species Bonnemaisoniaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO6333 Annona glabra Species Annonaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19170 Lasianthaea podocephala Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO968 Artemisia pectinata Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO2884 Annona squamosa Species Annonaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18927 Clinacanthus nutans Species Acanthaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO9906 Zephyranthes flava Species Amaryllidaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO17114 Streptomyces melanogenes Species Streptomycetaceae Bacteria n.a. n.a. n.a. Database[UNPD]
NPO25370 Botrychium ternatum Species Ophioglossaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO5455 Euploca racemosa Species Heliotropiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO16135 Pestalotiopsis oenotherae Species Sporocadaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO1783 Euonymus fortunei Species Celastraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO24402.1 Coffea liberica var. dewevrei Varieties Rubiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO16325 Sideritis dasygnaphala Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO15810 Zea mays Species Poaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO29450 Streptomyces parvisporogenes Species Streptomycetaceae Bacteria n.a. n.a. n.a. Database[UNPD]
NPO12223 Stellaria media Species Caryophyllaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19436 Annona cherimola Species Annonaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18676 Clerodendrum trichotomum Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO12870 Curcuma aeruginosa Species Zingiberaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO15802 Papaver pseudocanescens Species Papaveraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO14233 Ormosia dasycarpa Species Limoniidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO13737 Tephroseris kirilowii Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18765 Juniperus scopulorum Species Cupressaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18169 Creosphaeria sassafras Species Xylariaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18602 Melampodium leucanthum Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO16981 Gutierrezia dracunculoides Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]

☑ Note for Reference:
In addition to directly collecting NP source organism data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated them from below databases:
UNPD: Universal Natural Products Database [PMID: 23638153].
StreptomeDB: a database of streptomycetes natural products [PMID: 33051671].
TM-MC: a database of medicinal materials and chemical compounds in Northeast Asian traditional medicine [PMID: 26156871].
TCM@Taiwan: a Traditional Chinese Medicine database [PMID: 21253603].
TCMID: a Traditional Chinese Medicine database [PMID: 29106634].
TCMSP: The traditional Chinese medicine systems pharmacology database and analysis platform [PMID: 24735618].
HerDing: a herb recommendation system to treat diseases using genes and chemicals [PMID: 26980517].
MetaboLights: a metabolomics database [PMID: 27010336].
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  NP Quantity Composition/Concentration

Organism ID NP ID Organism Material Preparation Organism Part NP Quantity (Standard) NP Quantity (Minimum) NP Quantity (Maximum) Quantity Unit Reference

☑ Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP quantitative records for specific NP domains (e.g., NPS from foods or herbs) from domain-specific databases. These databases include:
DUKE: Dr. Duke's Phytochemical and Ethnobotanical Databases.
PHENOL EXPLORER: is the first comprehensive database on polyphenol content in foods [PMID: 24103452], its homepage can be accessed at here.
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT113 Cell Line RAW264.7 Mus musculus IC50 = 14320.0 nM PMID[475108]
NPT113 Cell Line RAW264.7 Mus musculus Inhibition = 70.4 % PMID[475108]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. Inhibition = 14.9 % PMID[475106]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. Inhibition = 8.6 % PMID[475106]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. Inhibition = 14.4 % PMID[475106]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. Inhibition = 6.8 % PMID[475106]
NPT24 Organism Human immunodeficiency virus 1 Human immunodeficiency virus 1 EC50 = 0.8 ug.mL-1 PMID[475107]
NPT27 Others Unspecified Ratio > 5.0 n.a. PMID[475107]

☑ Note for Activity Records:
☉ The quantitative biological activities were primarily integrated from ChEMBL (Version-30) database and were also directly collected from PubMed literature. PubMed PMID was provided as the reference link for each activity record.

  Chemically structural similarity: I. Similar Active Natural Products in NPASS

Top-200 similar NPs were calculated against the active-NP-set (includes 4,3285 NPs with experimentally-derived bioactivity available in NPASS)

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC180199 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
1.0 High Similarity NPC477919
0.9861 High Similarity NPC476732
0.9861 High Similarity NPC199965
0.9342 High Similarity NPC477935
0.9333 High Similarity NPC472853
0.9306 High Similarity NPC472854
0.9178 High Similarity NPC24014
0.9178 High Similarity NPC27349
0.9091 High Similarity NPC477936
0.9014 High Similarity NPC319671
0.9014 High Similarity NPC469941
0.9014 High Similarity NPC476734
0.9014 High Similarity NPC252032
0.8974 High Similarity NPC259173
0.8961 High Similarity NPC12933
0.8889 High Similarity NPC477929
0.8875 High Similarity NPC472272
0.88 High Similarity NPC4209
0.8784 High Similarity NPC280026
0.8784 High Similarity NPC167702
0.8784 High Similarity NPC477930
0.8767 High Similarity NPC469940
0.8684 High Similarity NPC474404
0.8684 High Similarity NPC171658
0.8684 High Similarity NPC207010
0.8684 High Similarity NPC264602
0.8684 High Similarity NPC317913
0.8667 High Similarity NPC212733
0.8667 High Similarity NPC472311
0.8649 High Similarity NPC310766
0.863 High Similarity NPC477850
0.8608 High Similarity NPC317066
0.8608 High Similarity NPC121121
0.8592 High Similarity NPC477931
0.8592 High Similarity NPC42060
0.8592 High Similarity NPC268736
0.859 High Similarity NPC470609
0.8571 High Similarity NPC224802
0.8571 High Similarity NPC80089
0.8571 High Similarity NPC171426
0.8571 High Similarity NPC34046
0.8571 High Similarity NPC324700
0.8571 High Similarity NPC185465
0.8553 High Similarity NPC477933
0.8553 High Similarity NPC477932
0.8493 Intermediate Similarity NPC324607
0.8493 Intermediate Similarity NPC196197
0.8493 Intermediate Similarity NPC321732
0.8493 Intermediate Similarity NPC64466
0.8462 Intermediate Similarity NPC320144
0.8462 Intermediate Similarity NPC201276
0.8462 Intermediate Similarity NPC80891
0.8462 Intermediate Similarity NPC472310
0.8451 Intermediate Similarity NPC190827
0.8451 Intermediate Similarity NPC243469
0.8451 Intermediate Similarity NPC475943
0.8442 Intermediate Similarity NPC143133
0.8442 Intermediate Similarity NPC298168
0.8442 Intermediate Similarity NPC477918
0.8421 Intermediate Similarity NPC477934
0.8415 Intermediate Similarity NPC92139
0.8378 Intermediate Similarity NPC108131
0.8375 Intermediate Similarity NPC100366
0.8375 Intermediate Similarity NPC242771
0.8375 Intermediate Similarity NPC311642
0.8375 Intermediate Similarity NPC164289
0.8333 Intermediate Similarity NPC476733
0.8333 Intermediate Similarity NPC215029
0.8333 Intermediate Similarity NPC329117
0.8272 Intermediate Similarity NPC245866
0.8267 Intermediate Similarity NPC58057
0.8267 Intermediate Similarity NPC156277
0.8267 Intermediate Similarity NPC320549
0.8267 Intermediate Similarity NPC151018
0.825 Intermediate Similarity NPC77311
0.825 Intermediate Similarity NPC58631
0.8243 Intermediate Similarity NPC474962
0.8219 Intermediate Similarity NPC478180
0.8219 Intermediate Similarity NPC63190
0.8219 Intermediate Similarity NPC474221
0.8219 Intermediate Similarity NPC130459
0.8214 Intermediate Similarity NPC33398
0.8193 Intermediate Similarity NPC476727
0.8193 Intermediate Similarity NPC476726
0.8193 Intermediate Similarity NPC80590
0.8193 Intermediate Similarity NPC474448
0.8161 Intermediate Similarity NPC206878
0.8161 Intermediate Similarity NPC470423
0.8158 Intermediate Similarity NPC232112
0.8148 Intermediate Similarity NPC102156
0.8148 Intermediate Similarity NPC289486
0.8148 Intermediate Similarity NPC328007
0.8148 Intermediate Similarity NPC61107
0.8148 Intermediate Similarity NPC30583
0.8148 Intermediate Similarity NPC148740
0.8125 Intermediate Similarity NPC261616
0.8118 Intermediate Similarity NPC24705
0.8118 Intermediate Similarity NPC56962
0.8108 Intermediate Similarity NPC473225
0.8101 Intermediate Similarity NPC471045
0.8095 Intermediate Similarity NPC134197
0.8068 Intermediate Similarity NPC215570
0.8052 Intermediate Similarity NPC472945
0.8052 Intermediate Similarity NPC472944
0.8052 Intermediate Similarity NPC254340
0.8049 Intermediate Similarity NPC472744
0.8049 Intermediate Similarity NPC268578
0.8049 Intermediate Similarity NPC327451
0.8049 Intermediate Similarity NPC217559
0.8049 Intermediate Similarity NPC292458
0.8026 Intermediate Similarity NPC473267
0.8026 Intermediate Similarity NPC472309
0.8025 Intermediate Similarity NPC469745
0.8 Intermediate Similarity NPC213178
0.8 Intermediate Similarity NPC131892
0.8 Intermediate Similarity NPC255176
0.8 Intermediate Similarity NPC183374
0.8 Intermediate Similarity NPC211162
0.8 Intermediate Similarity NPC327728
0.8 Intermediate Similarity NPC6120
0.8 Intermediate Similarity NPC31302
0.8 Intermediate Similarity NPC245029
0.7978 Intermediate Similarity NPC116683
0.7976 Intermediate Similarity NPC475007
0.7975 Intermediate Similarity NPC23884
0.7975 Intermediate Similarity NPC475031
0.7975 Intermediate Similarity NPC66105
0.7952 Intermediate Similarity NPC473336
0.7952 Intermediate Similarity NPC263974
0.7952 Intermediate Similarity NPC471044
0.7949 Intermediate Similarity NPC195155
0.7949 Intermediate Similarity NPC174964
0.7949 Intermediate Similarity NPC179858
0.7949 Intermediate Similarity NPC273366
0.7949 Intermediate Similarity NPC97534
0.7949 Intermediate Similarity NPC21220
0.7949 Intermediate Similarity NPC125767
0.7927 Intermediate Similarity NPC170985
0.7922 Intermediate Similarity NPC153719
0.7922 Intermediate Similarity NPC81759
0.7907 Intermediate Similarity NPC116146
0.7907 Intermediate Similarity NPC24772
0.7907 Intermediate Similarity NPC220498
0.7901 Intermediate Similarity NPC477851
0.7895 Intermediate Similarity NPC476731
0.7867 Intermediate Similarity NPC478228
0.7865 Intermediate Similarity NPC470031
0.7857 Intermediate Similarity NPC266651
0.7857 Intermediate Similarity NPC201655
0.7848 Intermediate Similarity NPC472486
0.7848 Intermediate Similarity NPC5767
0.7848 Intermediate Similarity NPC472487
0.7848 Intermediate Similarity NPC475742
0.7848 Intermediate Similarity NPC246445
0.7841 Intermediate Similarity NPC472231
0.7841 Intermediate Similarity NPC472232
0.7816 Intermediate Similarity NPC77756
0.7792 Intermediate Similarity NPC197701
0.7792 Intermediate Similarity NPC478227
0.7792 Intermediate Similarity NPC89310
0.7778 Intermediate Similarity NPC52951
0.7778 Intermediate Similarity NPC476176
0.7765 Intermediate Similarity NPC80700
0.7765 Intermediate Similarity NPC2783
0.7765 Intermediate Similarity NPC472745
0.7765 Intermediate Similarity NPC70661
0.7765 Intermediate Similarity NPC472505
0.7765 Intermediate Similarity NPC302111
0.7763 Intermediate Similarity NPC107919
0.7753 Intermediate Similarity NPC470424
0.775 Intermediate Similarity NPC221420
0.7738 Intermediate Similarity NPC319909
0.7733 Intermediate Similarity NPC41542
0.7727 Intermediate Similarity NPC52756
0.7722 Intermediate Similarity NPC317242
0.7711 Intermediate Similarity NPC154043
0.7711 Intermediate Similarity NPC268040
0.7711 Intermediate Similarity NPC202688
0.7711 Intermediate Similarity NPC60018
0.7703 Intermediate Similarity NPC472946
0.7703 Intermediate Similarity NPC230047
0.7703 Intermediate Similarity NPC19311
0.7692 Intermediate Similarity NPC470610
0.7674 Intermediate Similarity NPC269360
0.7674 Intermediate Similarity NPC202937
0.7674 Intermediate Similarity NPC264005
0.7674 Intermediate Similarity NPC239938
0.7674 Intermediate Similarity NPC33768
0.7674 Intermediate Similarity NPC263802
0.7674 Intermediate Similarity NPC252714
0.7654 Intermediate Similarity NPC26029
0.7654 Intermediate Similarity NPC472608
0.7647 Intermediate Similarity NPC131350
0.7647 Intermediate Similarity NPC264317
0.7647 Intermediate Similarity NPC294438
0.764 Intermediate Similarity NPC476189
0.764 Intermediate Similarity NPC291373
0.7632 Intermediate Similarity NPC260319
0.7632 Intermediate Similarity NPC2568
0.7632 Intermediate Similarity NPC100917

  Chemically structural similarity: II. Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC180199 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.88 High Similarity NPD6117 Approved
0.8784 High Similarity NPD6113 Clinical (unspecified phase)
0.8684 High Similarity NPD6116 Phase 1
0.8667 High Similarity NPD3702 Approved
0.863 High Similarity NPD4244 Approved
0.863 High Similarity NPD4245 Approved
0.8571 High Similarity NPD6115 Approved
0.8571 High Similarity NPD6114 Approved
0.8571 High Similarity NPD6118 Approved
0.8571 High Similarity NPD6697 Approved
0.8514 High Similarity NPD6081 Approved
0.8493 Intermediate Similarity NPD3698 Phase 2
0.8378 Intermediate Similarity NPD4789 Approved
0.8333 Intermediate Similarity NPD4224 Phase 2
0.8267 Intermediate Similarity NPD5777 Approved
0.8267 Intermediate Similarity NPD4808 Clinical (unspecified phase)
0.8267 Intermediate Similarity NPD4809 Clinical (unspecified phase)
0.8194 Intermediate Similarity NPD3171 Clinical (unspecified phase)
0.8108 Intermediate Similarity NPD5360 Phase 3
0.8108 Intermediate Similarity NPD5361 Clinical (unspecified phase)
0.8 Intermediate Similarity NPD3699 Clinical (unspecified phase)
0.8 Intermediate Similarity NPD3700 Clinical (unspecified phase)
0.7831 Intermediate Similarity NPD4788 Approved
0.7763 Intermediate Similarity NPD4267 Clinical (unspecified phase)
0.7647 Intermediate Similarity NPD7520 Clinical (unspecified phase)
0.7564 Intermediate Similarity NPD4758 Discontinued
0.75 Intermediate Similarity NPD3198 Approved
0.75 Intermediate Similarity NPD3703 Phase 2
0.7439 Intermediate Similarity NPD5364 Discontinued
0.7436 Intermediate Similarity NPD4787 Phase 1
0.7312 Intermediate Similarity NPD6083 Phase 2
0.7312 Intermediate Similarity NPD6084 Phase 2
0.7229 Intermediate Similarity NPD3671 Phase 1
0.7143 Intermediate Similarity NPD8034 Phase 2
0.7143 Intermediate Similarity NPD8035 Phase 2
0.7111 Intermediate Similarity NPD4753 Phase 2
0.6932 Remote Similarity NPD3665 Phase 1
0.6932 Remote Similarity NPD4786 Approved
0.6932 Remote Similarity NPD3666 Approved
0.6932 Remote Similarity NPD3133 Approved
0.6915 Remote Similarity NPD5695 Phase 3
0.6897 Remote Similarity NPD4223 Phase 3
0.6897 Remote Similarity NPD4221 Approved
0.6882 Remote Similarity NPD6399 Phase 3
0.6875 Remote Similarity NPD5696 Approved
0.6869 Remote Similarity NPD8170 Clinical (unspecified phase)
0.6854 Remote Similarity NPD5329 Approved
0.6813 Remote Similarity NPD7513 Clinical (unspecified phase)
0.6806 Remote Similarity NPD3729 Clinical (unspecified phase)
0.6804 Remote Similarity NPD8418 Phase 2
0.68 Remote Similarity NPD5739 Approved
0.68 Remote Similarity NPD7128 Approved
0.68 Remote Similarity NPD6402 Approved
0.68 Remote Similarity NPD6675 Approved
0.6782 Remote Similarity NPD4139 Approved
0.6782 Remote Similarity NPD4692 Approved
0.6778 Remote Similarity NPD7146 Approved
0.6778 Remote Similarity NPD6684 Approved
0.6778 Remote Similarity NPD5330 Approved
0.6778 Remote Similarity NPD7521 Approved
0.6778 Remote Similarity NPD7334 Approved
0.6778 Remote Similarity NPD6409 Approved
0.6778 Remote Similarity NPD6098 Approved
0.6774 Remote Similarity NPD5284 Approved
0.6774 Remote Similarity NPD5281 Approved
0.6742 Remote Similarity NPD4197 Approved
0.6739 Remote Similarity NPD6673 Approved
0.6739 Remote Similarity NPD6080 Approved
0.6739 Remote Similarity NPD6904 Approved
0.6737 Remote Similarity NPD4629 Approved
0.6737 Remote Similarity NPD5210 Approved
0.6705 Remote Similarity NPD3667 Approved
0.6702 Remote Similarity NPD4202 Approved
0.6667 Remote Similarity NPD7909 Approved
0.6667 Remote Similarity NPD7320 Approved
0.6667 Remote Similarity NPD6928 Phase 2
0.6667 Remote Similarity NPD6899 Approved
0.6667 Remote Similarity NPD6881 Approved
0.663 Remote Similarity NPD6903 Approved
0.663 Remote Similarity NPD5737 Approved
0.663 Remote Similarity NPD6672 Approved
0.6602 Remote Similarity NPD6372 Approved
0.6602 Remote Similarity NPD6373 Approved
0.6598 Remote Similarity NPD4755 Approved
0.6596 Remote Similarity NPD7515 Phase 2
0.6593 Remote Similarity NPD4689 Approved
0.6593 Remote Similarity NPD5205 Approved
0.6593 Remote Similarity NPD4688 Approved
0.6593 Remote Similarity NPD4690 Approved
0.6593 Remote Similarity NPD4138 Approved
0.6593 Remote Similarity NPD4693 Phase 3
0.6571 Remote Similarity NPD8297 Approved
0.6569 Remote Similarity NPD5697 Approved
0.6569 Remote Similarity NPD5701 Approved
0.6562 Remote Similarity NPD6356 Clinical (unspecified phase)
0.6559 Remote Similarity NPD5328 Approved
0.6538 Remote Similarity NPD7102 Approved
0.6538 Remote Similarity NPD6883 Approved
0.6538 Remote Similarity NPD7290 Approved
0.6531 Remote Similarity NPD7638 Approved
0.6509 Remote Similarity NPD8133 Approved
0.6509 Remote Similarity NPD4632 Approved
0.6505 Remote Similarity NPD6011 Approved
0.6477 Remote Similarity NPD7525 Registered
0.6476 Remote Similarity NPD6401 Clinical (unspecified phase)
0.6476 Remote Similarity NPD6650 Approved
0.6476 Remote Similarity NPD6847 Approved
0.6476 Remote Similarity NPD6649 Approved
0.6476 Remote Similarity NPD6869 Approved
0.6476 Remote Similarity NPD8130 Phase 1
0.6476 Remote Similarity NPD6617 Approved
0.6465 Remote Similarity NPD7639 Approved
0.6465 Remote Similarity NPD5285 Approved
0.6465 Remote Similarity NPD4696 Approved
0.6465 Remote Similarity NPD5286 Approved
0.6465 Remote Similarity NPD7640 Approved
0.6465 Remote Similarity NPD4700 Approved
0.6452 Remote Similarity NPD5208 Approved
0.6442 Remote Similarity NPD6014 Approved
0.6442 Remote Similarity NPD6013 Approved
0.6442 Remote Similarity NPD6012 Approved
0.6437 Remote Similarity NPD4238 Approved
0.6437 Remote Similarity NPD4802 Phase 2
0.6437 Remote Similarity NPD3617 Approved
0.6421 Remote Similarity NPD6079 Approved
0.6421 Remote Similarity NPD5693 Phase 1
0.6421 Remote Similarity NPD6050 Approved
0.6415 Remote Similarity NPD6882 Approved
0.6413 Remote Similarity NPD5690 Phase 2
0.6413 Remote Similarity NPD5280 Approved
0.6413 Remote Similarity NPD3618 Phase 1
0.6413 Remote Similarity NPD3574 Clinical (unspecified phase)
0.6413 Remote Similarity NPD4694 Approved
0.6408 Remote Similarity NPD6412 Phase 2
0.64 Remote Similarity NPD5223 Approved
0.6354 Remote Similarity NPD8171 Discontinued
0.6351 Remote Similarity NPD615 Clinical (unspecified phase)
0.6341 Remote Similarity NPD6705 Phase 1
0.6337 Remote Similarity NPD7632 Discontinued
0.6337 Remote Similarity NPD5224 Approved
0.6337 Remote Similarity NPD5226 Approved
0.6337 Remote Similarity NPD5211 Phase 2
0.6337 Remote Similarity NPD4633 Approved
0.6337 Remote Similarity NPD5225 Approved
0.6316 Remote Similarity NPD5692 Phase 3
0.631 Remote Similarity NPD4243 Approved
0.6289 Remote Similarity NPD7748 Approved
0.6275 Remote Similarity NPD4754 Approved
0.6275 Remote Similarity NPD5174 Approved
0.6275 Remote Similarity NPD5175 Approved
0.625 Remote Similarity NPD5694 Approved
0.625 Remote Similarity NPD5784 Clinical (unspecified phase)
0.6239 Remote Similarity NPD6940 Discontinued
0.6238 Remote Similarity NPD1700 Approved
0.6237 Remote Similarity NPD5279 Phase 3
0.6226 Remote Similarity NPD4634 Approved
0.6222 Remote Similarity NPD5369 Approved
0.6214 Remote Similarity NPD5141 Approved
0.6211 Remote Similarity NPD6051 Approved
0.6211 Remote Similarity NPD7285 Clinical (unspecified phase)
0.6207 Remote Similarity NPD3701 Clinical (unspecified phase)
0.6207 Remote Similarity NPD6933 Approved
0.6196 Remote Similarity NPD3668 Phase 3
0.6182 Remote Similarity NPD7115 Discovery
0.6182 Remote Similarity NPD6009 Approved
0.618 Remote Similarity NPD4195 Approved
0.6174 Remote Similarity NPD7507 Approved
0.6163 Remote Similarity NPD4785 Approved
0.6163 Remote Similarity NPD4784 Approved
0.6162 Remote Similarity NPD5221 Approved
0.6162 Remote Similarity NPD4697 Phase 3
0.6162 Remote Similarity NPD5220 Clinical (unspecified phase)
0.6162 Remote Similarity NPD5222 Approved
0.6161 Remote Similarity NPD6319 Approved
0.6154 Remote Similarity NPD6920 Discontinued
0.6154 Remote Similarity NPD4767 Approved
0.6154 Remote Similarity NPD4768 Approved
0.6146 Remote Similarity NPD5207 Approved
0.6126 Remote Similarity NPD6335 Approved
0.6122 Remote Similarity NPD6001 Approved
0.6111 Remote Similarity NPD4748 Discontinued
0.6111 Remote Similarity NPD5368 Approved
0.61 Remote Similarity NPD5173 Approved
0.61 Remote Similarity NPD7902 Approved
0.6092 Remote Similarity NPD6942 Approved
0.6092 Remote Similarity NPD7339 Approved
0.6091 Remote Similarity NPD6274 Approved
0.6087 Remote Similarity NPD5362 Discontinued
0.6071 Remote Similarity NPD7101 Approved
0.6071 Remote Similarity NPD7100 Approved
0.6061 Remote Similarity NPD5654 Approved
0.6055 Remote Similarity NPD8298 Phase 2
0.6038 Remote Similarity NPD5345 Clinical (unspecified phase)
0.6038 Remote Similarity NPD5128 Approved
0.6038 Remote Similarity NPD4730 Approved
0.6038 Remote Similarity NPD4729 Approved
0.6036 Remote Similarity NPD6317 Approved
0.602 Remote Similarity NPD5133 Approved
0.6017 Remote Similarity NPD7319 Approved
0.6 Remote Similarity NPD7604 Phase 2

  Bioactivity similarity: Similar Natural Products in NPASS

Bioactivity similarity was calculated based on bioactivity descriptors of compounds. The bioactivity descriptors were calculated by a recently developed AI algorithm Chemical Checker (CC) [Nature Biotechnology, 38:1087–1096, 2020; Nature Communications, 12:3932, 2021], which evaluated bioactivity similarities at five levels:
A: chemistry similarity;
B: biological targets similarity;
C: networks similarity;
D: cell-based bioactivity similarity;
E: similarity based on clinical data.

Those 5 categories of CC bioactivity descriptors were calculated and then subjected to manifold projection using UMAP algorithm, to project all NPs on a 2-Dimensional space. The current NP was highlighted with a small circle in the 2-D map. Below figures: left-to-right, A-to-E.

A: chemistry similarity
B: biological targets similarity
C: networks similarity
D: cell-based bioactivity similarity
E: similarity based on clinical data