Natural Product: NPC135222| Natural Product ID | NPC135222 |
|
Common Name
The InCHIKey will be temporarily assigned as the "Common Name" if no IUPAC name or alternative short name is available.
| GEAGRKQCZVLNAU-FYHMHJJZSA-N |
| IUPAC Name | n.a. |
| Synonyms | |
| Synthetic Gene Cluster | n.a. |
| ChEMBL Identifier | CHEMBL478921 |
| PubChem CID |
11754973 |
| Chemical Classification |
|
The Chemical Classification was calculated by Classyfire, a software for chemical taxonomy calculation. Reference: DOI:10.1186/s13321-016-0174-y.
Chemical Representations
| Standard InCHIKey | GEAGRKQCZVLNAU-FYHMHJJZSA-N |
| Standard InCHI | InChI=1S/C20H18O14/c21-3-8-13(26)16-17(20(31)32-8)34-19(30)5-2-7(23)12(25)15(28)10(5)9-4(18(29)33-16)1-6(22)11(24)14(9)27/h1-2,8,13,16-17,20-28,31H,3H2/t8-,13-,16+,17-,20-/m1/s1 |
| SMILES | c1c2c(-c3c(cc(c(c3O)O)O)C(=O)O[C@@H]3[C@H]([C@@H]([C@@H](CO)O[C@H]3O)O)OC2=O)c(c(c1O)O)O |
  Calculated Properties| Molecular Weight:   | 482.07 | Volume:   | 422.222 Van der Waals volume.
|
| Dense:   | 1.142 | LogP:   | -1.21 The logarithm of the n-octanol/water distribution coefficients.
|
| logD7.4:   | -0.663 The logarithm of the n-octanol/water distribution coefficient at pH=7.4.
|
LogS:   | -1.842 The logarithm of aqueous solubility value.
|
| Rotatable Bonds:   | 1.0 | Rigid Bonds:   | 27.0 |
| TPSA:   | 243.9 Topological Polar Surface Area.
|
H-Bond Acceptor:   | 14.0 |
| H-Bond Donor:   | 9.0 | Rings:   | 4.0 |
| Heavy Atoms:   | 14.0 |
| QED Drug-Likeness Score:   | 0.17 | GASA:   | 1.0 GASA represents the probability of being difficult to synthesize, ranging from 0 to 1.
|
| Synthetic Accessibility Score:   | 4.912 | Fsp3:   | 0.3 |
| MCE-18:   | 98.154 MCE-18 stands for medicinal chemistry evolution.MCE-18≥45 is considered a suitable value.
|
Lipinski Rule-of-5:   | Accepted |
| Pfizer Rule:   | Rejected | GSK Rule:   | Accepted |
| Golden Triangle Rule:   | Rejected | BMS Rule:   | 1 |
| Chelating Alert:   | 1 | PAINS Alert:   | 1 |
| Colloidal aggregators:   | 0.814 | Fluc inhibitor:   | 0.071 The fluc inhibitor value is the probability of being fLuc inhibitors, within the range of 0 to 1.
|
| Blue fluorescence:   | 0.415 The blue fluorescence value is the probability of being blue fluorescence, within the range of 0 to 1
|
Green fluorescence:   | 0.396 The green fluorescence value is the probability of being green fluorescence, within the range of 0 to 1
|
| Reactive compounds:   | 0.541 | Promiscuous compounds:   | 0.921 |
| Caco-2 Permeability:   | -6.908 | MDCK Permeability:   | -4.773 |
| Pgp-inhibitor:   | 0.0 | Pgp-substrate:   | 0.121 |
| PAMPA:   |
1.0 The experimental data for Peff was logarithmically transformed (logPeff). Molecules with log Peff values below 2.0 were classified as low-permeability (Category 0), while those with log Peff values exceeding 2.5 were classified as high-permeability (Category 1).
|
Human Intestinal Absorption (HIA):   | 0.897 |
| 20% Bioavailability (F20%):   | 0.403 | 30% Bioavailability (F30%):   | 0.97 |
| 50% Bioavailability (F50%):   | 0.951 |
| Blood-Brain-Barrier Penetration (BBB):   | 0.0 | MRP1:   | 0.948 |
| Plasma Protein Binding (PPB):   | 53.858% | Volume Distribution (VD):   | -0.352 |
| Fu: |
43.905% The fraction unbound in plasms.
|
OATP1B1 inhibitor:   | 0.895 |
| OATP1B3 inhibitor:   | 0.878 | BCRP inhibitor:   | 0.086 |
| BSEP inhibitor:   | 0.001 |
| CYP1A2-inhibitor:   | 0.0 | CYP1A2-substrate:   | 0.0 |
| CYP2C19-inhibitor:   | 0.0 | CYP2C19-substrate:   | 0.0 |
| CYP2C9-inhibitor:   | 0.031 | CYP2C9-substrate:   | 0.0 |
| CYP2D6-inhibitor:   | 0.0 | CYP2D6-substrate:   | 0.007 |
| CYP3A4-inhibitor:   | 0.0 | CYP3A4-substrate:   | 0.002 |
| CYP2B6-substrate:   | 0.0 | CYP2C8-inhibitor:   | 0.87 |
| HLM stability:   |
0.031 Human liver microsomal (HLM) stability. Category 0: stable+ (HLM > 30 min); Category 1: unstable- (HLM ≤ 30 min). The output value is the probability of human liver microsomal instability, where a value closer to 1 indicates a higher likelihood of instability.
|
| Clearance (CL):   | 5.532 | Half-life (T1/2):   | 2.845 |
| hERG Blockers:   | 0.004 | hERG Blockers (10um):   | 0.465 |
| Human Hepatotoxicity (H-HT):   | 0.404 | Drug-induced Liver Injury (DILI):   | 0.98 |
| AMES Toxicity:   | 0.95 | Rat Oral Acute Toxicity:   | 0.068 |
| Maximum Recommended Daily Dose:   | 0.089 | Skin Sensitization:   | 1.0 |
| Carcinogencity:   | 0.113 | Eye Corrosion:   | 0.005 |
| Eye Irritation:   | 0.969 | Respiratory Toxicity:   | 0.022 |
| Drug-induced Neurotoxicity:   | 0.0 | Ototoxicity:   | 0.985 |
| Hematotoxicity:   | 0.051 | Drug-induced Nephrotoxicity:   | 0.581 |
| Genotoxicity:   | 0.991 | RPMI-8226 Immunitoxicity:   | 0.012 |
| A549 Cytotoxicity:   | 0.992 | Hek293 Cytotoxicity:   | 0.032 |
| BCF:   |
0.325 Bioconcentration factors are used for considering secondary poisoning potential and assessing risks to human health via the food chain. The unit is -log10[(mg/L)/(1000*MW)].
|
IGC50:   |
2.901 48 hour Tetrahymena pyriformis IGC50. The unit of IGC50 is -log10[(mg/L)/(1000*MW)].
|
| LC50DM:   |
4.091 48 hour Daphnia magna LC50. The unit of LC50DM is -log10[(mg/L)/(1000*MW)].
|
LC50FM:   |
3.84 96 hour fathead minnow LC50. The unit of LC50FM is -log10[(mg/L)/(1000*MW)].
|
  Species Source| Organism ID | Organism Name | Taxonomy Level | Family | SuperKingdom | Isolation Part | Collection Location | Collection Time | Reference |
|---|---|---|---|---|---|---|---|---|
| NPO21349 | Punica granatum | Species | Lythraceae | Eukaryota | n.a. | fruit | n.a. | DOI[10.1007/s00217-007-0799-1] |
| NPO21349 | Punica granatum | Species | Lythraceae | Eukaryota | n.a. | flower | n.a. | DOI[10.1016/j.foodchem.2011.01.077] |
| NPO12926 | Dendrospora tenella | Species | n.a. | Eukaryota | n.a. | n.a. | n.a. |
PMID[10217713] |
| NPO25715 | Senna siamea | Species | Fabaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[10757709] |
| NPO2130 | Ehretia dicksonii | Species | Ehretiaceae | Eukaryota | n.a. | leaf | n.a. |
PMID[10830513] |
| NPO2130 | Ehretia dicksonii | Species | Ehretiaceae | Eukaryota | n.a. | twig | n.a. |
PMID[10830513] |
| NPO2130 | Ehretia dicksonii | Species | Ehretiaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[10830513] |
| NPO21349 | Punica granatum | Species | Lythraceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[11520216] |
| NPO6774 | Khaya senegalensis | Species | Meliaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[12193039] |
| NPO20652 | Phytolacca acinosa | Species | Phytolaccaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[12932140] |
| NPO21349 | Punica granatum | Species | Lythraceae | Eukaryota | Seeds | n.a. | n.a. |
PMID[15620261] |
| NPO20779 | Garcinia hombroniana | Species | Clusiaceae | Eukaryota | leaves | n.a. | n.a. |
PMID[16124765] |
| NPO25715 | Senna siamea | Species | Fabaceae | Eukaryota | n.a. | leaf | n.a. |
PMID[17685627] |
| NPO12088 | Conyza canadensis | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[20121251] |
| NPO1103 | Dioscorea japonica | Species | Dioscoreaceae | Eukaryota | rhizomes | n.a. | n.a. |
PMID[21353549] |
| NPO20842 | Beauveria felina | Species | Cordycipitaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[21438588] |
| NPO13504 | Lotus japonicus | Species | Fabaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[21510636] |
| NPO20146 | Cladiella krempfi | Species | Alcyoniidae | Eukaryota | n.a. | n.a. | n.a. |
PMID[21861494] |
| NPO20096 | Cirsium japonicum | Species | Asteraceae | Eukaryota | n.a. | whole plant | n.a. |
PMID[21899269] |
| NPO12088 | Conyza canadensis | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[22612410] |
| NPO25715 | Senna siamea | Species | Fabaceae | Eukaryota | Stems | n.a. | n.a. |
PMID[23078294] |
| NPO6774 | Khaya senegalensis | Species | Meliaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[23210623] |
| NPO25715 | Senna siamea | Species | Fabaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[23513740] |
| NPO20842 | Beauveria felina | Species | Cordycipitaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[23822585] |
| NPO20842 | Beauveria felina | Species | Cordycipitaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[26295595] |
| NPO14089 | Hypericum ascyron | Species | Hypericaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[30379546] |
| NPO14089 | Hypericum ascyron | Species | Hypericaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[31596079] |
| NPO11882 | Cedrus libani | Species | Pinaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[32092041] |
| NPO21349 | Punica granatum | Species | Lythraceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[36560643] |
| NPO16414 | Thuja plicata | Species | Cupressaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[36985451] |
| NPO12088 | Conyza canadensis | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[38792265] |
| NPO16414 | Thuja plicata | Species | Cupressaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[38794396] |
| NPO21349 | Punica granatum | Species | Lythraceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[39138188] |
| NPO21349 | Punica granatum | Species | Lythraceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[39527985] |
| NPO22052 | Aspergillus candidus | Species | Aspergillaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[5391291] |
| NPO20972 | Oscillatoria princeps | Species | Oscillatoriaceae | Bacteria | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO21349 | Punica granatum | Species | Lythraceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO19899 | Crepis foetida | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO22121 | Piper arboreum | Species | Piperaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO22568 | Aristolochia elegans | Species | Aristolochiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO25715 | Senna siamea | Species | Fabaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO21227 | Aglaia elaeagnoidea | Species | Meliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO21282 | Aplidium orthium | Species | Polyclinidae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO22893 | Apterostigma dentigerum | Species | Formicidae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO22052 | Aspergillus candidus | Species | Aspergillaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO28912 | Astragalus gummifer | Species | Fabaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO20842 | Beauveria felina | Species | Cordycipitaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO2780 | Brenneria rubrifaciens | Species | Pectobacteriaceae | Bacteria | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO21096 | Cardiospermum halicacabum | Species | Sapindaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO21859 | Centaurea nigrescens | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO20096 | Cirsium japonicum | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO20146 | Cladiella krempfi | Species | Alcyoniidae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO12088 | Conyza canadensis | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO12362 | Coreopsis fasciculata | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO23010 | Crinum defixum | Species | Amaryllidaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO22763 | Cuphea carthagenensis | Species | Lythraceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO20332 | Dioscoreophyllum cumminsii | Species | Menispermaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO20209 | Dorstenia lindeniana | Species | Moraceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO21603 | Eskemukerjea megacarpum | n.a. | n.a. | n.a. | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO22381 | Euphorbia segetalis | Species | Euphorbiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO20779 | Garcinia hombroniana | Species | Clusiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO21991 | Modiolus demissus | Species | Mytilidae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO22829 | Ozoroa insignis | Species | Anacardiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO22250 | Parastrephia lepidophylla | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO22635 | Penstemon secundiflorus | Species | Plantaginaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO6395 | Phedimus kamtschaticus | Species | Crassulaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO22315 | Phlogacanthus thyrsiflorus | Species | Acanthaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO21420 | Phormia regina | Species | Calliphoridae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO20652 | Phytolacca acinosa | Species | Phytolaccaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO21730 | Pouzolzia occidentalis | Species | Urticaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO22976 | Ruta microcarpa | Species | Rutaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO13355 | Selinum carvifolium | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO22447 | Sidastrum acuminatum | Species | Malvaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO22509 | Syncolostemon parviflorus | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO16414 | Thuja plicata | Species | Cupressaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO29466 | Triglochin maritima | Species | Juncaginaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO21473 | Urtica triangularis | Species | Urticaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO23953 | Zanthoxylum monophyllum | Species | Rutaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO13504 | Lotus japonicus | Species | Fabaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO14615 | Streptomyces paulus | Species | Streptomycetaceae | Bacteria | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO6179 | Aframomum amaniense | Species | Zingiberaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO14504 | Alectoria divergens | Species | Parmeliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO14200 | Aristolochia zollingeriana | Species | Aristolochiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO3199 | Balanophora involucrata | Species | Balanophoraceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO1661 | Bartramia pomiformis | Species | Bartramiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO7752 | Beilschmiedia anacardioides | Species | Lauraceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO11882 | Cedrus libani | Species | Pinaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO13076 | Cephalaria grossheimii | Species | Caprifoliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO12754 | Cerinthe minor | Species | Boraginaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO21498 | Coccus ilicis | Species | Coccidae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO12585 | Craspidospermum verticillatum | Species | Apocynaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO9669 | Dictyopteris acrostichoides | Species | Dictyotaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO1103 | Dioscorea japonica | Species | Dioscoreaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO2130 | Ehretia dicksonii | Species | Ehretiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO14089 | Hypericum ascyron | Species | Hypericaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO12069 | Isaria felina | Species | Cordycipitaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO12910 | Ixeris stolonifera | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO12061 | Justicia paniculata | Species | Acanthaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO12234 | Khaya ivorensis | Species | Meliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO6774 | Khaya senegalensis | Species | Meliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO10389 | Larix cajanderi | Species | Pinaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO3458 | Lupinus verbasciformis | Species | Fabaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO13701 | Melaleuca rhaphiophylla | Species | Myrtaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO7169 | Nama hispidum | Species | Namaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO12414 | Penicillium paxilli | Species | Aspergillaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO14289 | Pieris napi | Species | Pieridae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO13907 | Senecio renardii | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO10865 | Sextonia rubra | Species | Lauraceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO10012 | Triaenophora rupestris | Species | Orobanchaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO25774 | Virola multinervia | Species | Myristicaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO13091 | Helianthus ciliaris | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO12926 | Dendrospora tenella | Species | n.a. | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO11384 | Tibouchina semidecandra | Species | Melastomataceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO20658 | Lonicera caerulea | Species | Caprifoliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO13415 | Securigera coronilla | Species | Romaleidae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO10422 | Penicillium thymicola | Species | Aspergillaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO6238 | Pseudo-nitzschia multiseries | Species | Bacillariaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO12431 | Cytospora rhizophorae | Species | Valsaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO12771 | Eucalyptus alba | Species | Myrtaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO13919 | Agathis microstachya | Species | Araucariaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO21349 | Punica granatum | Species | Lythraceae | Eukaryota | n.a. | n.a. | Database[FooDB] | |
| NPO21349 | Punica granatum | Species | Lythraceae | Eukaryota | Bark | n.a. | n.a. | Database[FooDB] |
| NPO21349 | Punica granatum | Species | Lythraceae | Eukaryota | Fruit | n.a. | n.a. | Database[FooDB] |
| NPO21349 | Punica granatum | Species | Lythraceae | Eukaryota | Leaf | n.a. | n.a. | Database[FooDB] |
| NPO21349 | Punica granatum | Species | Lythraceae | Eukaryota | Pericarp | n.a. | n.a. | Database[FooDB] |
| NPO21349 | Punica granatum | Species | Lythraceae | Eukaryota | Root Bark | n.a. | n.a. | Database[FooDB] |
| NPO21349 | Punica granatum | Species | Lythraceae | Eukaryota | Seed | n.a. | n.a. | Database[FooDB] |
| NPO21349 | Punica granatum | Species | Lythraceae | Eukaryota | Stem Bark | n.a. | n.a. | Database[FooDB] |
| NPO21349 | Punica granatum | Species | Lythraceae | Eukaryota | Twig | n.a. | n.a. | Database[FooDB] |
| NPO21349 | Punica granatum | Species | Lythraceae | Eukaryota | n.a. | n.a. | Database[FooDB] | |
| NPO12088 | Conyza canadensis | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO21349 | Punica granatum | Species | Lythraceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO14089 | Hypericum ascyron | Species | Hypericaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO13907 | Senecio renardii | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO25774 | Virola multinervia | Species | Myristicaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO20096 | Cirsium japonicum | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO22976 | Ruta microcarpa | Species | Rutaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO1103 | Dioscorea japonica | Species | Dioscoreaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO16414 | Thuja plicata | Species | Cupressaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO21096 | Cardiospermum halicacabum | Species | Sapindaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO21349 | Punica granatum | Species | Lythraceae | Eukaryota | n.a. | n.a. | Database[Phenol-Explorer] | |
| NPO21349 | Punica granatum | Species | Lythraceae | Eukaryota | Fruits | n.a. | Database[Phenol-Explorer] | |
| NPO6395 | Phedimus kamtschaticus | Species | Crassulaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO3199 | Balanophora involucrata | Species | Balanophoraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO20652 | Phytolacca acinosa | Species | Phytolaccaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO1103 | Dioscorea japonica | Species | Dioscoreaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO14089 | Hypericum ascyron | Species | Hypericaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO29466 | Triglochin maritima | Species | Juncaginaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO22976 | Ruta microcarpa | Species | Rutaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO21349 | Punica granatum | Species | Lythraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO16414 | Thuja plicata | Species | Cupressaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO12088 | Conyza canadensis | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO20096 | Cirsium japonicum | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO13091 | Helianthus ciliaris | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO13907 | Senecio renardii | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO21096 | Cardiospermum halicacabum | Species | Sapindaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO25715 | Senna siamea | Species | Fabaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO22121 | Piper arboreum | Species | Piperaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO7310 | Corchorus trilocularis | Species | Malvaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO25774 | Virola multinervia | Species | Myristicaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO12088 | Conyza canadensis | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO20096 | Cirsium japonicum | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO14089 | Hypericum ascyron | Species | Hypericaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO21096 | Cardiospermum halicacabum | Species | Sapindaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO21349 | Punica granatum | Species | Lythraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO20652 | Phytolacca acinosa | Species | Phytolaccaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO22976 | Ruta microcarpa | Species | Rutaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO21349 | Punica granatum | Species | Lythraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO20096 | Cirsium japonicum | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO20652 | Phytolacca acinosa | Species | Phytolaccaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO1103 | Dioscorea japonica | Species | Dioscoreaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO28912 | Astragalus gummifer | Species | Fabaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO22447 | Sidastrum acuminatum | Species | Malvaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO23953 | Zanthoxylum monophyllum | Species | Rutaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO21498 | Coccus ilicis | Species | Coccidae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO21859 | Centaurea nigrescens | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO21730 | Pouzolzia occidentalis | Species | Urticaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO9669 | Dictyopteris acrostichoides | Species | Dictyotaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO23010 | Crinum defixum | Species | Amaryllidaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO2130 | Ehretia dicksonii | Species | Ehretiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO22568 | Aristolochia elegans | Species | Aristolochiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO20652 | Phytolacca acinosa | Species | Phytolaccaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO3199 | Balanophora involucrata | Species | Balanophoraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO21227 | Aglaia elaeagnoidea | Species | Meliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO20209 | Dorstenia lindeniana | Species | Moraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO20146 | Cladiella krempfi | Species | Alcyoniidae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO12088 | Conyza canadensis | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO25774 | Virola multinervia | Species | Myristicaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO14089 | Hypericum ascyron | Species | Hypericaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO1103 | Dioscorea japonica | Species | Dioscoreaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO21473 | Urtica triangularis | Species | Urticaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO10049 | Coleophoma empetri | Species | n.a. | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO20842 | Beauveria felina | Species | Cordycipitaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO16414 | Thuja plicata | Species | Cupressaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO22250 | Parastrephia lepidophylla | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO25715 | Senna siamea | Species | Fabaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO13701 | Melaleuca rhaphiophylla | Species | Myrtaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO20779 | Garcinia hombroniana | Species | Clusiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO6395 | Phedimus kamtschaticus | Species | Crassulaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO13091 | Helianthus ciliaris | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO12069 | Isaria felina | Species | Cordycipitaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO1661 | Bartramia pomiformis | Species | Bartramiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO13907 | Senecio renardii | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO12910 | Ixeris stolonifera | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO22635 | Penstemon secundiflorus | Species | Plantaginaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO21603 | Eskemukerjea megacarpum | n.a. | n.a. | n.a. | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO20096 | Cirsium japonicum | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO22829 | Ozoroa insignis | Species | Anacardiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO21096 | Cardiospermum halicacabum | Species | Sapindaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO13504 | Lotus japonicus | Species | Fabaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO20332 | Dioscoreophyllum cumminsii | Species | Menispermaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO20972 | Oscillatoria princeps | Species | Oscillatoriaceae | Bacteria | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO22976 | Ruta microcarpa | Species | Rutaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO13355 | Selinum carvifolium | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO14200 | Aristolochia zollingeriana | Species | Aristolochiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO13415 | Securigera coronilla | Species | Romaleidae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO14504 | Alectoria divergens | Species | Parmeliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO12754 | Cerinthe minor | Species | Boraginaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO12771 | Eucalyptus alba | Species | Myrtaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO22052 | Aspergillus candidus | Species | Aspergillaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO14289 | Pieris napi | Species | Pieridae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO13625 | Salacia beddomei | Species | Celastraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO11384 | Tibouchina semidecandra | Species | Melastomataceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO21282 | Aplidium orthium | Species | Polyclinidae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO22509 | Syncolostemon parviflorus | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO10012 | Triaenophora rupestris | Species | Orobanchaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO22121 | Piper arboreum | Species | Piperaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO7169 | Nama hispidum | Species | Namaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO7752 | Beilschmiedia anacardioides | Species | Lauraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO12414 | Penicillium paxilli | Species | Aspergillaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO21349 | Punica granatum | Species | Lythraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO28041 | Scaevola taccada | Species | Goodeniaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO22315 | Phlogacanthus thyrsiflorus | Species | Acanthaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO10389 | Larix cajanderi | Species | Pinaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO10865 | Sextonia rubra | Species | Lauraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO13518 | Senecio stabianus | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO11882 | Cedrus libani | Species | Pinaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO3458 | Lupinus verbasciformis | Species | Fabaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO22893 | Apterostigma dentigerum | Species | Formicidae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO14615 | Streptomyces paulus | Species | Streptomycetaceae | Bacteria | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO12234 | Khaya ivorensis | Species | Meliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO20658 | Lonicera caerulea | Species | Caprifoliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO10422 | Penicillium thymicola | Species | Aspergillaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO22763 | Cuphea carthagenensis | Species | Lythraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO6774 | Khaya senegalensis | Species | Meliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO13076 | Cephalaria grossheimii | Species | Caprifoliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO19899 | Crepis foetida | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO22381 | Euphorbia segetalis | Species | Euphorbiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO12431 | Cytospora rhizophorae | Species | Valsaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO13919 | Agathis microstachya | Species | Araucariaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO29466 | Triglochin maritima | Species | Juncaginaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO12061 | Justicia paniculata | Species | Acanthaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO12245 | Lasiosiphon burchellii | Species | Thymelaeaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO21991 | Modiolus demissus | Species | Mytilidae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO6238 | Pseudo-nitzschia multiseries | Species | Bacillariaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO28912 | Astragalus gummifer | Species | Fabaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO21420 | Phormia regina | Species | Calliphoridae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO12362 | Coreopsis fasciculata | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO12585 | Craspidospermum verticillatum | Species | Apocynaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO9097 | Solanum hypomalacophyllum | Species | Solanaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO2780 | Brenneria rubrifaciens | Species | Pectobacteriaceae | Bacteria | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO6179 | Aframomum amaniense | Species | Zingiberaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO4425 | Delphinium honanense | Species | Ranunculaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO7310 | Corchorus trilocularis | Species | Malvaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO12926 | Dendrospora tenella | Species | n.a. | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
Note for Reference:
In addition to directly collecting NP source organism data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated them from below databases:
☉ UNPD: Universal Natural Products Database [PMID: 23638153].
☉ StreptomeDB: a database of streptomycetes natural products [PMID: 33051671].
☉ TM-MC: a database of medicinal materials and chemical compounds in Northeast Asian traditional medicine [PMID: 26156871].
☉ TCM@Taiwan: a Traditional Chinese Medicine database [PMID: 21253603].
☉ TCMID: a Traditional Chinese Medicine database [PMID: 29106634].
☉ TCMSP: The traditional Chinese medicine systems pharmacology database and analysis platform [PMID: 24735618].
☉ HerDing: a herb recommendation system to treat diseases using genes and chemicals [PMID: 26980517].
☉ MetaboLights: a metabolomics database [PMID: 27010336].
☉ FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].
  NP Quantity Composition/Concentration| Organism ID | Organism Name | Organism Material Preparation | Organism Part | NP Quantity (Standard) | NP Quantity (Minimum) | NP Quantity (Maximum) | Quantity Unit | Reference |
|---|
Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP quantitative records for specific NP domains (e.g., NPS from foods or herbs) from domain-specific databases. These databases include:
☉ DUKE: Dr. Duke's Phytochemical and Ethnobotanical Databases.
☉ PHENOL EXPLORER: is the first comprehensive database on polyphenol content in foods [PMID: 24103452], its homepage can be accessed at here.
☉ FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].
Biological Activity
| Target ID | Target Type | Target Name | Target Organism | Activity Type | Activity Relation | Value | Unit | Reference |
|---|
| Target ID | Target Type | Target Name | Target Organism | Activity Type | Activity Relation | Value | Unit | Reference |
|---|
| Target ID | Target Type | Target Name | Target Organism | Activity Type | Activity Relation | Value | Unit | Reference |
|---|---|---|---|---|---|---|---|---|
| NPT29 | Organism | Rattus norvegicus | Rattus norvegicus | Activity | = | -5.5 | mmHg | DOI[10.1021/np50094a030] |
Experimental ADME
| Experiment Model | Experiment Tissue | ADME Type | ADME Relation | ADME Value | ADME Unit | Reference |
|---|
Experimental Toxicity
| Experiment Model | Experiment Organism | Toxicity Type | Toxicity Relation | Toxicity Value | Toxicity Unit | Reference |
|---|
Common Abbreviations:
LC: Lethal Concentration; LD: Lethal Dose; LT:Lethal Time; NOAEL: No-observed-adverse-effect Level; BMDL: Benchmark Dose Lower Confidence Limit; BMD: Benchmark Dose; BMC:Benchmark Concentration; LOAEL: Lowest Observed Adverse Effect Level; RfD:Reference Dose; RfC:Reference Concentration; MRL: Minimal Risk Level; MEG: Maximum Exposure Guideline; PAC: Protective Action Criteria
| Hepatotoxicity | Carcinogenicity | Mutagenicity | Cardiotoxicity | Respiratory Toxicity | Eye Irritation | Endocrine Disruption |
|---|---|---|---|---|---|---|
|
|
|
|
|
|
|
Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP toxicity records from domain-specific databases. These databases include:
☉ ToxValDB: a curated database that compiles quantitative toxicity values for chemicals from diverse public sources to support toxicological research and risk assessment.
☉ TOXRIC: a comprehensive, free-to-access, online database providing toxicological/feature data. The toxicity labels are retrieved from this database. [PMID: 36400569]
  Chemically structural similarityTop-200 similar NPs were calculated against the active-NP-set (includes approximately 50,000 NPs with experimentally-derived bioactivity available in NPASS)
Similarity is measured using the Tanimoto coefficient (Tc) , which compares the binary fingerprints of two molecules. Tc is calculated as the intersection divided by the union of '1' bits in the fingerprints, ranging from 0 to 1, with 1 indicating highest similarity.
●  The left chart: Distribution of similarity level between NPC135222 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.5 or Top200).
Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.
●  The left chart: Distribution of similarity level between NPC135222 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.5 or Top200).
| Similarity Score | Similarity Level | Drug ID | Developmental Stage |
|---|---|---|---|
| NPD |
  Bioactivity similaritySimilarity level is defined by Bioactivity similarity was calculated based on bioactivity descriptors of compounds. The bioactivity descriptors were calculated by a recently developed AI algorithm Chemical Checker (CC) [Nature Biotechnology, 38:1087–1096, 2020; Nature Communications, 12:3932, 2021], which evaluated bioactivity similarities at five levels:
☉ A: chemistry similarity;
☉ B: biological targets similarity;
☉ C: networks similarity;
☉ D: cell-based bioactivity similarity;
☉ E: similarity based on clinical data.
Those 5 categories of CC bioactivity descriptors were calculated and then subjected to manifold projection using UMAP algorithm, to project all NPs on a 2-Dimensional space. The current NP was highlighted with a small circle in the 2-D map. Below figures: left-to-right, A-to-E.
