Natural Product: NPC99957

Natural Product ID:  NPC99957
Common Name:   5-Hydroxy-6-Methoxy-2-Methylchromone-7-O-Rutinoside
IUPAC Name:   5-hydroxy-6-methoxy-2-methyl-7-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-[[(2R,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxymethyl]oxan-2-yl]oxychromen-4-one
Synonyms:  
Molecular Formula:   C23H30O14
Standard InCHIKey:  SBMOEJYIIKODKJ-JVBHFNPYSA-N
Standard InCHI:  InChI=1S/C23H30O14/c1-7-4-9(24)13-10(34-7)5-11(21(32-3)16(13)27)36-23-20(31)18(29)15(26)12(37-23)6-33-22-19(30)17(28)14(25)8(2)35-22/h4-5,8,12,14-15,17-20,22-23,25-31H,6H2,1-3H3/t8-,12+,14-,15+,17+,18-,19+,20+,22+,23+/m0/s1
Canonical SMILES:  COc1c(O[C@@H]2O[C@H](CO[C@@H]3O[C@@H](C)[C@@H]([C@H]([C@H]3O)O)O)[C@H]([C@@H]([C@H]2O)O)O)cc2c(c1O)c(=O)cc(o2)C
First Find Year:  
Max Developmental Stage:  
Synthetic Gene Cluster:   ;

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO27978 Crossosoma bigelovii Species Crossosomataceae Eukaryota PMID[19405508]
NPO27978 Crossosoma bigelovii Species Crossosomataceae Eukaryota Flowers PMID[19405508]
NPO27978 Crossosoma bigelovii Species Crossosomataceae Eukaryota Twigs PMID[19405508]
NPO27978 Crossosoma bigelovii Species Crossosomataceae Eukaryota fruit PMID[19405508]
NPO27978 Crossosoma bigelovii Species Crossosomataceae Eukaryota Leaves PMID[19405508]

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT81 Cell Line A549 Homo sapiens GI50 = 400 nM 19405508
NPT139 Cell Line HT-29 Homo sapiens GI50 = 6000 nM 19405508
NPT83 Cell Line MCF7 Homo sapiens GI50 = 800 nM 19405508

  Similar Natural Products in NPASS

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC99957 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
1.0 High Similarity NPC181616
0.9872 High Similarity NPC94777
0.9748 High Similarity NPC45638
0.9748 High Similarity NPC93337
0.9748 High Similarity NPC58053
0.9748 High Similarity NPC469931
0.9748 High Similarity NPC475942
0.9748 High Similarity NPC186807
0.9748 High Similarity NPC105025
0.9748 High Similarity NPC226294
0.9748 High Similarity NPC201292
0.9689 High Similarity NPC204693
0.9688 High Similarity NPC224462
0.9688 High Similarity NPC183357
0.9688 High Similarity NPC21190
0.9688 High Similarity NPC22195
0.9686 High Similarity NPC45618
0.9686 High Similarity NPC58716
0.9686 High Similarity NPC146792
0.9627 High Similarity NPC48773
0.9627 High Similarity NPC172807
0.9627 High Similarity NPC259152
0.9627 High Similarity NPC254540
0.9627 High Similarity NPC205076
0.9627 High Similarity NPC476405
0.9627 High Similarity NPC3583
0.9627 High Similarity NPC117260
0.9627 High Similarity NPC307518
0.9627 High Similarity NPC211594
0.9625 High Similarity NPC471457
0.9625 High Similarity NPC472381
0.9625 High Similarity NPC472383
0.9625 High Similarity NPC210042
0.9625 High Similarity NPC183036
0.9625 High Similarity NPC95855
0.9625 High Similarity NPC170675
0.9625 High Similarity NPC112755
0.962 High Similarity NPC284960
0.962 High Similarity NPC222936
0.9571 High Similarity NPC169733
0.9568 High Similarity NPC24043
0.9568 High Similarity NPC236191
0.9568 High Similarity NPC169977
0.9568 High Similarity NPC42773
0.9568 High Similarity NPC239549
0.9568 High Similarity NPC101026
0.9568 High Similarity NPC45522
0.9568 High Similarity NPC21666
0.9568 High Similarity NPC51774
0.9565 High Similarity NPC34287
0.9565 High Similarity NPC471416
0.9565 High Similarity NPC474434
0.9565 High Similarity NPC245014
0.9565 High Similarity NPC84265
0.9565 High Similarity NPC282987
0.9565 High Similarity NPC105511
0.9565 High Similarity NPC44558
0.9563 High Similarity NPC93099
0.956 High Similarity NPC22832
0.956 High Similarity NPC311830
0.9557 High Similarity NPC473043
0.9509 High Similarity NPC477848
0.9506 High Similarity NPC472386
0.9506 High Similarity NPC301683
0.9506 High Similarity NPC267254
0.9503 High Similarity NPC209296
0.9503 High Similarity NPC229687
0.9503 High Similarity NPC195257
0.95 High Similarity NPC115674
0.95 High Similarity NPC5778
0.95 High Similarity NPC236934
0.95 High Similarity NPC210073
0.9497 High Similarity NPC19709
0.9497 High Similarity NPC270335
0.9497 High Similarity NPC191306
0.9497 High Similarity NPC243930
0.9497 High Similarity NPC309025
0.9497 High Similarity NPC88023
0.9455 High Similarity NPC470443
0.9455 High Similarity NPC470444
0.9455 High Similarity NPC110941
0.9455 High Similarity NPC241423
0.9455 High Similarity NPC473571
0.9455 High Similarity NPC473682
0.9455 High Similarity NPC126784
0.9451 High Similarity NPC233994
0.9451 High Similarity NPC198324
0.9451 High Similarity NPC65563
0.9451 High Similarity NPC470949
0.9451 High Similarity NPC8573
0.9451 High Similarity NPC211532
0.9451 High Similarity NPC472385
0.9444 High Similarity NPC231194
0.9444 High Similarity NPC51326
0.9441 High Similarity NPC229729
0.9441 High Similarity NPC325555
0.9441 High Similarity NPC135345
0.9441 High Similarity NPC226304
0.9441 High Similarity NPC477502
0.9441 High Similarity NPC45400
0.9441 High Similarity NPC265530
0.9434 High Similarity NPC189142
0.9434 High Similarity NPC77660
0.943 High Similarity NPC110349
0.9398 High Similarity NPC473071
0.9398 High Similarity NPC473073
0.9394 High Similarity NPC168584
0.939 High Similarity NPC135277
0.939 High Similarity NPC102028
0.939 High Similarity NPC49344
0.939 High Similarity NPC472607
0.939 High Similarity NPC210094
0.939 High Similarity NPC264735
0.939 High Similarity NPC237435
0.939 High Similarity NPC142996
0.939 High Similarity NPC43211
0.939 High Similarity NPC115760
0.939 High Similarity NPC101191
0.9387 High Similarity NPC156977
0.9387 High Similarity NPC475155
0.9387 High Similarity NPC256760
0.9383 High Similarity NPC223747
0.9383 High Similarity NPC203050
0.9383 High Similarity NPC219904
0.9383 High Similarity NPC225434
0.9383 High Similarity NPC86008
0.9383 High Similarity NPC227508
0.9383 High Similarity NPC120099
0.9379 High Similarity NPC21100
0.9379 High Similarity NPC8856
0.9379 High Similarity NPC197285
0.9379 High Similarity NPC277174
0.9379 High Similarity NPC73855
0.9379 High Similarity NPC113968
0.9379 High Similarity NPC328940
0.9379 High Similarity NPC135599
0.9375 High Similarity NPC29830
0.9375 High Similarity NPC88043
0.9375 High Similarity NPC168822
0.9371 High Similarity NPC182045
0.9341 High Similarity NPC473072
0.9341 High Similarity NPC470449
0.9341 High Similarity NPC470445
0.9341 High Similarity NPC470447
0.9341 High Similarity NPC470446
0.9333 High Similarity NPC257714
0.9333 High Similarity NPC472992
0.9333 High Similarity NPC268533
0.9333 High Similarity NPC472991
0.9333 High Similarity NPC472380
0.9333 High Similarity NPC472384
0.9333 High Similarity NPC472382
0.9329 High Similarity NPC208668
0.9329 High Similarity NPC4390
0.9325 High Similarity NPC79056
0.9325 High Similarity NPC52353
0.9325 High Similarity NPC78734
0.9325 High Similarity NPC293004
0.9325 High Similarity NPC105095
0.9325 High Similarity NPC67105
0.9325 High Similarity NPC206123
0.9325 High Similarity NPC177731
0.9325 High Similarity NPC95866
0.9325 High Similarity NPC44328
0.9325 High Similarity NPC285197
0.9325 High Similarity NPC150767
0.9321 High Similarity NPC116745
0.9321 High Similarity NPC275454
0.9321 High Similarity NPC84362
0.9321 High Similarity NPC223424
0.9321 High Similarity NPC173637
0.9321 High Similarity NPC127546
0.9321 High Similarity NPC52550
0.9321 High Similarity NPC317489
0.9317 High Similarity NPC19388
0.9317 High Similarity NPC284277
0.9317 High Similarity NPC55786
0.9317 High Similarity NPC240431
0.9317 High Similarity NPC165720
0.9317 High Similarity NPC475497
0.9317 High Similarity NPC475366
0.9317 High Similarity NPC277205
0.9317 High Similarity NPC15358
0.9313 High Similarity NPC300537
0.9313 High Similarity NPC127782
0.9286 High Similarity NPC148710
0.9286 High Similarity NPC470455
0.9286 High Similarity NPC470451
0.9277 High Similarity NPC476620
0.9277 High Similarity NPC472387
0.9277 High Similarity NPC476621
0.9277 High Similarity NPC476618
0.9277 High Similarity NPC476619
0.9277 High Similarity NPC476623
0.9277 High Similarity NPC476622
0.9273 High Similarity NPC16194
0.9273 High Similarity NPC220173
0.9273 High Similarity NPC19108
0.9273 High Similarity NPC473327
0.9273 High Similarity NPC198199

  Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC99957 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.9503 High Similarity NPD7054 Approved
0.9444 High Similarity NPD7472 Approved
0.939 High Similarity NPD4338 Clinical (unspecified phase)
0.9325 High Similarity NPD7074 Phase 3
0.9268 High Similarity NPD6797 Phase 2
0.9212 High Similarity NPD7251 Discontinued
0.9202 High Similarity NPD3818 Discontinued
0.9157 High Similarity NPD7808 Phase 3
0.8994 High Similarity NPD2801 Approved
0.8944 High Similarity NPD4381 Clinical (unspecified phase)
0.8848 High Similarity NPD6168 Clinical (unspecified phase)
0.8848 High Similarity NPD6167 Clinical (unspecified phase)
0.8848 High Similarity NPD6166 Phase 2
0.8812 High Similarity NPD1934 Approved
0.869 High Similarity NPD7804 Clinical (unspecified phase)
0.8642 High Similarity NPD2393 Clinical (unspecified phase)
0.8537 High Similarity NPD4868 Clinical (unspecified phase)
0.8476 Intermediate Similarity NPD3817 Phase 2
0.8447 Intermediate Similarity NPD1653 Approved
0.8428 Intermediate Similarity NPD1511 Approved
0.8424 Intermediate Similarity NPD3882 Suspended
0.8383 Intermediate Similarity NPD5494 Approved
0.8344 Intermediate Similarity NPD4380 Phase 2
0.8323 Intermediate Similarity NPD1512 Approved
0.8266 Intermediate Similarity NPD7993 Clinical (unspecified phase)
0.8253 Intermediate Similarity NPD5402 Approved
0.8218 Intermediate Similarity NPD6559 Discontinued
0.8084 Intermediate Similarity NPD1465 Phase 2
0.8047 Intermediate Similarity NPD7075 Discontinued
0.8046 Intermediate Similarity NPD5844 Phase 1
0.7989 Intermediate Similarity NPD7228 Approved
0.7937 Intermediate Similarity NPD1550 Clinical (unspecified phase)
0.7937 Intermediate Similarity NPD1552 Clinical (unspecified phase)
0.7927 Intermediate Similarity NPD4378 Clinical (unspecified phase)
0.7917 Intermediate Similarity NPD6801 Discontinued
0.7912 Intermediate Similarity NPD7879 Clinical (unspecified phase)
0.791 Intermediate Similarity NPD7685 Pre-registration
0.7907 Intermediate Similarity NPD6959 Discontinued
0.7888 Intermediate Similarity NPD1549 Phase 2
0.787 Intermediate Similarity NPD7096 Clinical (unspecified phase)
0.7861 Intermediate Similarity NPD6232 Discontinued
0.7831 Intermediate Similarity NPD5403 Approved
0.7829 Intermediate Similarity NPD7473 Discontinued
0.7824 Intermediate Similarity NPD8443 Clinical (unspecified phase)
0.7802 Intermediate Similarity NPD8397 Clinical (unspecified phase)
0.7791 Intermediate Similarity NPD1878 Clinical (unspecified phase)
0.7791 Intermediate Similarity NPD6234 Discontinued
0.7784 Intermediate Similarity NPD3751 Discontinued
0.7778 Intermediate Similarity NPD970 Clinical (unspecified phase)
0.7765 Intermediate Similarity NPD7819 Suspended
0.7764 Intermediate Similarity NPD2796 Approved
0.7759 Intermediate Similarity NPD3787 Discontinued
0.7758 Intermediate Similarity NPD6799 Approved
0.7751 Intermediate Similarity NPD7411 Suspended
0.7736 Intermediate Similarity NPD230 Phase 1
0.7725 Intermediate Similarity NPD6980 Clinical (unspecified phase)
0.7722 Intermediate Similarity NPD8313 Approved
0.7722 Intermediate Similarity NPD8312 Approved
0.7711 Intermediate Similarity NPD7410 Clinical (unspecified phase)
0.7711 Intermediate Similarity NPD5401 Approved
0.7706 Intermediate Similarity NPD37 Approved
0.7702 Intermediate Similarity NPD1510 Phase 2
0.7701 Intermediate Similarity NPD7199 Phase 2
0.7701 Intermediate Similarity NPD1247 Approved
0.7674 Intermediate Similarity NPD4967 Phase 2
0.7674 Intermediate Similarity NPD4966 Approved
0.7674 Intermediate Similarity NPD4965 Approved
0.7637 Intermediate Similarity NPD8055 Clinical (unspecified phase)
0.7619 Intermediate Similarity NPD6776 Approved
0.7619 Intermediate Similarity NPD6777 Approved
0.7619 Intermediate Similarity NPD6781 Approved
0.7619 Intermediate Similarity NPD6779 Approved
0.7619 Intermediate Similarity NPD6780 Approved
0.7619 Intermediate Similarity NPD6782 Approved
0.7619 Intermediate Similarity NPD6778 Approved
0.7607 Intermediate Similarity NPD7266 Discontinued
0.7577 Intermediate Similarity NPD8151 Discontinued
0.7562 Intermediate Similarity NPD1612 Clinical (unspecified phase)
0.7562 Intermediate Similarity NPD1613 Approved
0.7516 Intermediate Similarity NPD447 Suspended
0.7514 Intermediate Similarity NPD7240 Approved
0.7514 Intermediate Similarity NPD7184 Clinical (unspecified phase)
0.75 Intermediate Similarity NPD7696 Phase 3
0.75 Intermediate Similarity NPD2532 Approved
0.75 Intermediate Similarity NPD7698 Approved
0.75 Intermediate Similarity NPD2534 Approved
0.75 Intermediate Similarity NPD7782 Clinical (unspecified phase)
0.75 Intermediate Similarity NPD7783 Phase 2
0.75 Intermediate Similarity NPD7697 Approved
0.75 Intermediate Similarity NPD7435 Discontinued
0.75 Intermediate Similarity NPD2533 Approved
0.7486 Intermediate Similarity NPD919 Approved
0.7485 Intermediate Similarity NPD6599 Discontinued
0.7474 Intermediate Similarity NPD7584 Approved
0.7472 Intermediate Similarity NPD7852 Clinical (unspecified phase)
0.7453 Intermediate Similarity NPD1240 Approved
0.7453 Intermediate Similarity NPD943 Approved
0.744 Intermediate Similarity NPD6143 Clinical (unspecified phase)
0.7436 Intermediate Similarity NPD7701 Phase 2
0.7425 Intermediate Similarity NPD6190 Approved
0.7416 Intermediate Similarity NPD3926 Phase 2
0.741 Intermediate Similarity NPD2800 Approved
0.7407 Intermediate Similarity NPD1933 Approved
0.7375 Intermediate Similarity NPD3027 Phase 3
0.7371 Intermediate Similarity NPD7871 Phase 2
0.7371 Intermediate Similarity NPD7870 Phase 2
0.7365 Intermediate Similarity NPD3750 Approved
0.7362 Intermediate Similarity NPD1607 Approved
0.7358 Intermediate Similarity NPD1530 Clinical (unspecified phase)
0.7358 Intermediate Similarity NPD6823 Phase 2
0.7356 Intermediate Similarity NPD8455 Phase 2
0.7354 Intermediate Similarity NPD6535 Approved
0.7354 Intermediate Similarity NPD6534 Approved
0.7333 Intermediate Similarity NPD2935 Discontinued
0.733 Intermediate Similarity NPD7699 Phase 2
0.733 Intermediate Similarity NPD3749 Approved
0.733 Intermediate Similarity NPD7700 Phase 2
0.7312 Intermediate Similarity NPD1529 Clinical (unspecified phase)
0.7273 Intermediate Similarity NPD7874 Approved
0.7273 Intermediate Similarity NPD651 Clinical (unspecified phase)
0.7273 Intermediate Similarity NPD7875 Clinical (unspecified phase)
0.7273 Intermediate Similarity NPD7768 Phase 2
0.7262 Intermediate Similarity NPD4628 Phase 3
0.725 Intermediate Similarity NPD9494 Approved
0.7236 Intermediate Similarity NPD7801 Approved
0.7229 Intermediate Similarity NPD1551 Phase 2
0.7222 Intermediate Similarity NPD6859 Clinical (unspecified phase)
0.7216 Intermediate Similarity NPD5353 Approved
0.7209 Intermediate Similarity NPD920 Approved
0.7202 Intermediate Similarity NPD6674 Discontinued
0.7202 Intermediate Similarity NPD7237 Clinical (unspecified phase)
0.72 Intermediate Similarity NPD6844 Discontinued
0.7197 Intermediate Similarity NPD1091 Approved
0.7165 Intermediate Similarity NPD7501 Clinical (unspecified phase)
0.7152 Intermediate Similarity NPD6651 Approved
0.7126 Intermediate Similarity NPD6099 Approved
0.7126 Intermediate Similarity NPD6100 Approved
0.712 Intermediate Similarity NPD6212 Phase 3
0.712 Intermediate Similarity NPD6213 Phase 3
0.712 Intermediate Similarity NPD6214 Clinical (unspecified phase)
0.7101 Intermediate Similarity NPD7421 Clinical (unspecified phase)
0.7101 Intermediate Similarity NPD1243 Approved
0.7101 Intermediate Similarity NPD1652 Phase 2
0.7098 Intermediate Similarity NPD8090 Clinical (unspecified phase)
0.7093 Intermediate Similarity NPD642 Clinical (unspecified phase)
0.7085 Intermediate Similarity NPD7585 Approved
0.7081 Intermediate Similarity NPD5953 Discontinued
0.7072 Intermediate Similarity NPD5711 Approved
0.7072 Intermediate Similarity NPD5710 Approved
0.7066 Intermediate Similarity NPD3748 Approved
0.7059 Intermediate Similarity NPD6398 Clinical (unspecified phase)
0.7056 Intermediate Similarity NPD7680 Approved
0.7044 Intermediate Similarity NPD9269 Phase 2
0.7037 Intermediate Similarity NPD8150 Discontinued
0.7037 Intermediate Similarity NPD8434 Phase 2
0.7035 Intermediate Similarity NPD7583 Approved
0.7029 Intermediate Similarity NPD3226 Approved
0.702 Intermediate Similarity NPD8319 Approved
0.702 Intermediate Similarity NPD8320 Phase 1
0.7019 Intermediate Similarity NPD5619 Clinical (unspecified phase)
0.7005 Intermediate Similarity NPD4419 Clinical (unspecified phase)
0.7 Intermediate Similarity NPD6843 Phase 3
0.7 Intermediate Similarity NPD6841 Approved
0.7 Intermediate Similarity NPD6842 Approved
0.6995 Remote Similarity NPD4363 Phase 3
0.6995 Remote Similarity NPD4360 Phase 2
0.6994 Remote Similarity NPD7004 Clinical (unspecified phase)
0.6988 Remote Similarity NPD5123 Clinical (unspecified phase)
0.6988 Remote Similarity NPD5124 Phase 1
0.6977 Remote Similarity NPD643 Clinical (unspecified phase)
0.6973 Remote Similarity NPD7286 Phase 2
0.6964 Remote Similarity NPD7033 Discontinued
0.6936 Remote Similarity NPD7390 Discontinued
0.6932 Remote Similarity NPD7458 Discontinued
0.6923 Remote Similarity NPD8155 Clinical (unspecified phase)
0.6909 Remote Similarity NPD2313 Discontinued
0.6897 Remote Similarity NPD7422 Clinical (unspecified phase)
0.6894 Remote Similarity NPD4379 Clinical (unspecified phase)
0.689 Remote Similarity NPD4908 Phase 1
0.689 Remote Similarity NPD6832 Phase 2
0.6882 Remote Similarity NPD2346 Discontinued
0.6882 Remote Similarity NPD2344 Approved
0.6875 Remote Similarity NPD422 Phase 1
0.6871 Remote Similarity NPD2798 Approved
0.6867 Remote Similarity NPD6233 Phase 2
0.6864 Remote Similarity NPD2799 Discontinued
0.6864 Remote Similarity NPD1509 Clinical (unspecified phase)
0.6848 Remote Similarity NPD5242 Approved
0.6842 Remote Similarity NPD7090 Clinical (unspecified phase)
0.6842 Remote Similarity NPD2424 Discontinued
0.6834 Remote Similarity NPD5005 Approved
0.6834 Remote Similarity NPD5006 Approved
0.6832 Remote Similarity NPD9717 Approved
0.6831 Remote Similarity NPD8127 Discontinued
0.6825 Remote Similarity NPD7549 Discontinued
0.6816 Remote Similarity NPD7211 Clinical (unspecified phase)
0.6811 Remote Similarity NPD2403 Approved
0.6811 Remote Similarity NPD7784 Clinical (unspecified phase)
0.681 Remote Similarity NPD1203 Approved
0.6807 Remote Similarity NPD4907 Clinical (unspecified phase)

Structure

External Identifiers

PubChem CID   44139362
ChEMBL   CHEMBL564024
ZINC  

Physicochemical Properties

Molecular Weight:  530.16
ALogP:  -4.0303
MLogP:  2.45
XLogP:  -1.969
# Rotatable Bonds:  16
Polar Surface Area:  214.06
# H-Bond Aceptor:  10
# H-Bond Donor:  7
# Rings:  4
# Heavy Atoms:  37

Download Data

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General Info & Identifiers & Properties  
Structure MOL file  
Source Organisms  
Biological Activities  
Similar NPs/Drugs