Natural Product: NPC5428

Natural Product ID:  NPC5428
Common Name:   (-)-Carinol
IUPAC Name:   (2S,3S)-2,3-bis[(4-hydroxy-3-methoxyphenyl)methyl]butane-1,2,4-triol
Synonyms:   (-)-Carinol
Molecular Formula:   C20H26O7
Standard InCHIKey:  INPPVVSEQRZCLJ-MGPUTAFESA-N
Standard InCHI:  InChI=1S/C20H26O7/c1-26-18-8-13(3-5-16(18)23)7-15(11-21)20(25,12-22)10-14-4-6-17(24)19(9-14)27-2/h3-6,8-9,15,21-25H,7,10-12H2,1-2H3/t15-,20+/m0/s1
Canonical SMILES:  COc1cc(ccc1O)C[C@H]([C@@](Cc1ccc(c(c1)OC)O)(CO)O)CO
First Find Year:  
Max Developmental Stage:  
Synthetic Gene Cluster:   ;

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO4001 Berberis koreana Species Berberidaceae Eukaryota trunk Jeju island, Korea 2005-DEC PMID[21420296]

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT34 Cell Line BV-2 Mus musculus IC50 = 200900 nM 22938093
NPT147 Cell Line SK-MEL-2 Homo sapiens IC50 > 30000 nM 9036182
NPT81 Cell Line A549 Homo sapiens IC50 > 30000 nM 25763602
NPT146 Cell Line SK-OV-3 Homo sapiens IC50 > 30000 nM 9834160
NPT574 Cell Line XF498 Homo sapiens IC50 = 27620 nM 17300184

  Similar Natural Products in NPASS

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC5428 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
0.9835 High Similarity NPC165045
0.9835 High Similarity NPC118533
0.9677 High Similarity NPC277804
0.9669 High Similarity NPC148627
0.9667 High Similarity NPC280704
0.9597 High Similarity NPC42300
0.9597 High Similarity NPC187998
0.9597 High Similarity NPC257582
0.9597 High Similarity NPC77040
0.9597 High Similarity NPC145305
0.9597 High Similarity NPC153739
0.9597 High Similarity NPC242807
0.9597 High Similarity NPC92164
0.9597 High Similarity NPC64201
0.9597 High Similarity NPC241522
0.9597 High Similarity NPC174495
0.9583 High Similarity NPC85488
0.952 High Similarity NPC474017
0.9516 High Similarity NPC475875
0.9504 High Similarity NPC471693
0.9449 High Similarity NPC311256
0.9444 High Similarity NPC181049
0.9444 High Similarity NPC207400
0.9435 High Similarity NPC470084
0.9435 High Similarity NPC129570
0.9435 High Similarity NPC474178
0.9435 High Similarity NPC11258
0.9435 High Similarity NPC21867
0.9435 High Similarity NPC252307
0.9435 High Similarity NPC282703
0.9435 High Similarity NPC45774
0.9435 High Similarity NPC245826
0.9435 High Similarity NPC128208
0.9435 High Similarity NPC184733
0.9365 High Similarity NPC158079
0.9365 High Similarity NPC40432
0.9365 High Similarity NPC161557
0.9365 High Similarity NPC228346
0.9365 High Similarity NPC7171
0.9365 High Similarity NPC27843
0.9365 High Similarity NPC115207
0.936 High Similarity NPC476968
0.936 High Similarity NPC170844
0.9355 High Similarity NPC163332
0.9355 High Similarity NPC127587
0.9355 High Similarity NPC319625
0.9355 High Similarity NPC41706
0.9355 High Similarity NPC292056
0.9355 High Similarity NPC118787
0.9355 High Similarity NPC147821
0.9355 High Similarity NPC111247
0.9355 High Similarity NPC183181
0.9339 High Similarity NPC54872
0.9339 High Similarity NPC470212
0.9339 High Similarity NPC324571
0.9339 High Similarity NPC262156
0.9339 High Similarity NPC473853
0.9339 High Similarity NPC343720
0.9339 High Similarity NPC113865
0.9339 High Similarity NPC312675
0.9339 High Similarity NPC184651
0.9339 High Similarity NPC476343
0.9333 High Similarity NPC165133
0.9333 High Similarity NPC95614
0.9333 High Similarity NPC227217
0.9333 High Similarity NPC117780
0.9333 High Similarity NPC56214
0.9333 High Similarity NPC232316
0.9333 High Similarity NPC242885
0.9297 High Similarity NPC287745
0.9291 High Similarity NPC4940
0.9286 High Similarity NPC143483
0.928 High Similarity NPC472968
0.928 High Similarity NPC186843
0.928 High Similarity NPC206615
0.928 High Similarity NPC470213
0.928 High Similarity NPC98631
0.9274 High Similarity NPC178284
0.9274 High Similarity NPC76451
0.9274 High Similarity NPC58607
0.9274 High Similarity NPC191037
0.9274 High Similarity NPC206882
0.9256 High Similarity NPC207613
0.925 High Similarity NPC281298
0.925 High Similarity NPC310338
0.9219 High Similarity NPC158331
0.9206 High Similarity NPC5851
0.9206 High Similarity NPC86030
0.92 High Similarity NPC21563
0.92 High Similarity NPC106511
0.9194 High Similarity NPC233410
0.9194 High Similarity NPC251855
0.9194 High Similarity NPC472093
0.9194 High Similarity NPC57490
0.9194 High Similarity NPC298757
0.9194 High Similarity NPC203133
0.9194 High Similarity NPC117214
0.9194 High Similarity NPC193544
0.9194 High Similarity NPC221077
0.9194 High Similarity NPC475169
0.9194 High Similarity NPC17943
0.9194 High Similarity NPC116907
0.9194 High Similarity NPC208950
0.9194 High Similarity NPC194519
0.9187 High Similarity NPC31344
0.9187 High Similarity NPC317769
0.918 High Similarity NPC38996
0.918 High Similarity NPC470804
0.918 High Similarity NPC160380
0.9174 High Similarity NPC177475
0.9174 High Similarity NPC148615
0.9174 High Similarity NPC35071
0.9167 High Similarity NPC470626
0.9167 High Similarity NPC474040
0.9154 High Similarity NPC209985
0.9154 High Similarity NPC471988
0.9154 High Similarity NPC10737
0.9154 High Similarity NPC156502
0.9154 High Similarity NPC54743
0.9154 High Similarity NPC263367
0.9154 High Similarity NPC177160
0.9154 High Similarity NPC477939
0.9154 High Similarity NPC29799
0.9147 High Similarity NPC67247
0.9147 High Similarity NPC478085
0.9147 High Similarity NPC326095
0.9147 High Similarity NPC244983
0.9141 High Similarity NPC175067
0.9141 High Similarity NPC106739
0.9141 High Similarity NPC471505
0.9141 High Similarity NPC204215
0.9141 High Similarity NPC6451
0.9141 High Similarity NPC253105
0.9141 High Similarity NPC201587
0.9127 High Similarity NPC307050
0.9127 High Similarity NPC277458
0.9127 High Similarity NPC72529
0.9113 High Similarity NPC109822
0.9113 High Similarity NPC293701
0.9113 High Similarity NPC94276
0.9113 High Similarity NPC114901
0.9113 High Similarity NPC48990
0.9091 High Similarity NPC320987
0.9091 High Similarity NPC24474
0.9091 High Similarity NPC135961
0.9091 High Similarity NPC181969
0.9091 High Similarity NPC311595
0.9083 High Similarity NPC293619
0.9077 High Similarity NPC184938
0.9077 High Similarity NPC126409
0.9077 High Similarity NPC256262
0.9077 High Similarity NPC99572
0.9077 High Similarity NPC101624
0.9062 High Similarity NPC45715
0.9062 High Similarity NPC12275
0.9062 High Similarity NPC232275
0.9062 High Similarity NPC470096
0.9062 High Similarity NPC474356
0.9062 High Similarity NPC470095
0.9062 High Similarity NPC472597
0.9055 High Similarity NPC212015
0.9048 High Similarity NPC293054
0.9048 High Similarity NPC246620
0.9048 High Similarity NPC169474
0.9048 High Similarity NPC282000
0.9048 High Similarity NPC124452
0.9048 High Similarity NPC324112
0.9048 High Similarity NPC236791
0.9048 High Similarity NPC82679
0.9048 High Similarity NPC159968
0.9048 High Similarity NPC74817
0.9032 High Similarity NPC282496
0.9032 High Similarity NPC136319
0.9032 High Similarity NPC228922
0.9032 High Similarity NPC233526
0.9032 High Similarity NPC473451
0.9032 High Similarity NPC197757
0.9015 High Similarity NPC184613
0.9008 High Similarity NPC474214
0.9008 High Similarity NPC248727
0.9008 High Similarity NPC255675
0.9008 High Similarity NPC162659
0.9008 High Similarity NPC265433
0.9008 High Similarity NPC77861
0.9008 High Similarity NPC270456
0.9 High Similarity NPC187616
0.9 High Similarity NPC471942
0.9 High Similarity NPC221049
0.9 High Similarity NPC49603
0.9 High Similarity NPC193026
0.8992 High Similarity NPC184447
0.8992 High Similarity NPC7903
0.8992 High Similarity NPC470752
0.8992 High Similarity NPC16208
0.8992 High Similarity NPC35932
0.8992 High Similarity NPC160991
0.8984 High Similarity NPC192687
0.8984 High Similarity NPC173308
0.8984 High Similarity NPC126836
0.8984 High Similarity NPC311680

  Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC5428 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.936 High Similarity NPD3027 Phase 3
0.875 High Similarity NPD5283 Phase 1
0.8583 High Similarity NPD228 Approved
0.8561 High Similarity NPD1612 Clinical (unspecified phase)
0.8561 High Similarity NPD1613 Approved
0.8417 Intermediate Similarity NPD3021 Approved
0.8417 Intermediate Similarity NPD3022 Approved
0.8397 Intermediate Similarity NPD1529 Clinical (unspecified phase)
0.8321 Intermediate Similarity NPD1530 Clinical (unspecified phase)
0.8295 Intermediate Similarity NPD4379 Clinical (unspecified phase)
0.8284 Intermediate Similarity NPD3619 Clinical (unspecified phase)
0.8284 Intermediate Similarity NPD3620 Phase 2
0.8045 Intermediate Similarity NPD2861 Phase 2
0.8015 Intermediate Similarity NPD2982 Phase 2
0.8015 Intermediate Similarity NPD2983 Phase 2
0.8 Intermediate Similarity NPD3705 Approved
0.7985 Intermediate Similarity NPD4908 Phase 1
0.7939 Intermediate Similarity NPD2981 Phase 2
0.791 Intermediate Similarity NPD3018 Phase 2
0.7886 Intermediate Similarity NPD2684 Approved
0.7883 Intermediate Similarity NPD1558 Phase 1
0.7883 Intermediate Similarity NPD4060 Phase 1
0.7879 Intermediate Similarity NPD3600 Clinical (unspecified phase)
0.7874 Intermediate Similarity NPD7157 Approved
0.7868 Intermediate Similarity NPD4907 Clinical (unspecified phase)
0.7863 Intermediate Similarity NPD1610 Phase 2
0.7817 Intermediate Similarity NPD3060 Approved
0.7801 Intermediate Similarity NPD7266 Discontinued
0.7778 Intermediate Similarity NPD7843 Approved
0.7769 Intermediate Similarity NPD1357 Approved
0.7754 Intermediate Similarity NPD2238 Phase 2
0.7752 Intermediate Similarity NPD5536 Phase 2
0.7692 Intermediate Similarity NPD6674 Discontinued
0.7692 Intermediate Similarity NPD5698 Clinical (unspecified phase)
0.7667 Intermediate Similarity NPD37 Approved
0.7667 Intermediate Similarity NPD1934 Approved
0.7667 Intermediate Similarity NPD3020 Approved
0.7647 Intermediate Similarity NPD6234 Discontinued
0.7612 Intermediate Similarity NPD4749 Approved
0.7609 Intermediate Similarity NPD5111 Phase 2
0.7609 Intermediate Similarity NPD5110 Phase 2
0.7609 Intermediate Similarity NPD6410 Clinical (unspecified phase)
0.7609 Intermediate Similarity NPD5109 Approved
0.7597 Intermediate Similarity NPD6671 Approved
0.7589 Intermediate Similarity NPD4537 Clinical (unspecified phase)
0.7589 Intermediate Similarity NPD4536 Approved
0.7589 Intermediate Similarity NPD4538 Approved
0.7586 Intermediate Similarity NPD5307 Clinical (unspecified phase)
0.7574 Intermediate Similarity NPD6917 Clinical (unspecified phase)
0.7569 Intermediate Similarity NPD5177 Phase 3
0.7569 Intermediate Similarity NPD4236 Phase 3
0.7569 Intermediate Similarity NPD4237 Approved
0.7557 Intermediate Similarity NPD1548 Phase 1
0.7556 Intermediate Similarity NPD8651 Approved
0.7554 Intermediate Similarity NPD2674 Phase 3
0.7552 Intermediate Similarity NPD1375 Discontinued
0.7552 Intermediate Similarity NPD2029 Clinical (unspecified phase)
0.7537 Intermediate Similarity NPD2230 Approved
0.7537 Intermediate Similarity NPD2233 Approved
0.7537 Intermediate Similarity NPD2232 Approved
0.7536 Intermediate Similarity NPD4625 Phase 3
0.7536 Intermediate Similarity NPD7095 Approved
0.7516 Intermediate Similarity NPD4966 Approved
0.7516 Intermediate Similarity NPD4967 Phase 2
0.7516 Intermediate Similarity NPD4965 Approved
0.75 Intermediate Similarity NPD2801 Approved
0.75 Intermediate Similarity NPD3094 Phase 2
0.75 Intermediate Similarity NPD2977 Approved
0.75 Intermediate Similarity NPD2978 Approved
0.75 Intermediate Similarity NPD2393 Clinical (unspecified phase)
0.7483 Intermediate Similarity NPD6143 Clinical (unspecified phase)
0.7482 Intermediate Similarity NPD3145 Approved
0.7482 Intermediate Similarity NPD3144 Approved
0.7468 Intermediate Similarity NPD7975 Clinical (unspecified phase)
0.7467 Intermediate Similarity NPD4005 Discontinued
0.7466 Intermediate Similarity NPD6190 Approved
0.7463 Intermediate Similarity NPD1091 Approved
0.7447 Intermediate Similarity NPD5735 Approved
0.7445 Intermediate Similarity NPD6584 Phase 3
0.7444 Intermediate Similarity NPD2667 Approved
0.7444 Intermediate Similarity NPD6516 Phase 2
0.7444 Intermediate Similarity NPD2668 Approved
0.7444 Intermediate Similarity NPD5846 Approved
0.744 Intermediate Similarity NPD968 Approved
0.7432 Intermediate Similarity NPD4123 Phase 3
0.7421 Intermediate Similarity NPD7228 Approved
0.7417 Intermediate Similarity NPD2860 Approved
0.7417 Intermediate Similarity NPD2859 Approved
0.7415 Intermediate Similarity NPD7124 Phase 2
0.7415 Intermediate Similarity NPD5058 Phase 3
0.7413 Intermediate Similarity NPD5960 Phase 3
0.7413 Intermediate Similarity NPD5588 Approved
0.7405 Intermediate Similarity NPD6166 Phase 2
0.7405 Intermediate Similarity NPD6168 Clinical (unspecified phase)
0.7405 Intermediate Similarity NPD6167 Clinical (unspecified phase)
0.7403 Intermediate Similarity NPD3882 Suspended
0.74 Intermediate Similarity NPD1653 Approved
0.7397 Intermediate Similarity NPD4109 Clinical (unspecified phase)
0.7397 Intermediate Similarity NPD6331 Phase 2
0.7397 Intermediate Similarity NPD4110 Phase 3
0.7397 Intermediate Similarity NPD4628 Phase 3
0.7391 Intermediate Similarity NPD9494 Approved
0.7383 Intermediate Similarity NPD5261 Clinical (unspecified phase)
0.7381 Intermediate Similarity NPD290 Approved
0.7347 Intermediate Similarity NPD5241 Discontinued
0.7347 Intermediate Similarity NPD2677 Approved
0.7343 Intermediate Similarity NPD6896 Approved
0.7343 Intermediate Similarity NPD6895 Approved
0.7338 Intermediate Similarity NPD5752 Clinical (unspecified phase)
0.7333 Intermediate Similarity NPD2934 Approved
0.7333 Intermediate Similarity NPD9296 Approved
0.7333 Intermediate Similarity NPD3092 Approved
0.7333 Intermediate Similarity NPD2933 Approved
0.7329 Intermediate Similarity NPD4162 Approved
0.7325 Intermediate Similarity NPD7199 Phase 2
0.7324 Intermediate Similarity NPD6355 Discontinued
0.7324 Intermediate Similarity NPD3657 Discovery
0.7319 Intermediate Similarity NPD4624 Approved
0.731 Intermediate Similarity NPD3540 Phase 1
0.731 Intermediate Similarity NPD5762 Approved
0.731 Intermediate Similarity NPD5763 Approved
0.7303 Intermediate Similarity NPD4678 Approved
0.7303 Intermediate Similarity NPD4675 Approved
0.7292 Intermediate Similarity NPD6028 Clinical (unspecified phase)
0.7292 Intermediate Similarity NPD6029 Clinical (unspecified phase)
0.729 Intermediate Similarity NPD4868 Clinical (unspecified phase)
0.7279 Intermediate Similarity NPD1608 Approved
0.7279 Intermediate Similarity NPD2235 Phase 2
0.7279 Intermediate Similarity NPD2231 Phase 2
0.7273 Intermediate Similarity NPD6653 Approved
0.7273 Intermediate Similarity NPD6818 Clinical (unspecified phase)
0.7267 Intermediate Similarity NPD7527 Clinical (unspecified phase)
0.7267 Intermediate Similarity NPD52 Approved
0.7267 Intermediate Similarity NPD7526 Approved
0.7266 Intermediate Similarity NPD5451 Approved
0.7258 Intermediate Similarity NPD291 Approved
0.7254 Intermediate Similarity NPD3061 Approved
0.7254 Intermediate Similarity NPD3059 Approved
0.7254 Intermediate Similarity NPD3062 Approved
0.7248 Intermediate Similarity NPD4357 Discontinued
0.7248 Intermediate Similarity NPD1511 Approved
0.7241 Intermediate Similarity NPD2161 Phase 2
0.7241 Intermediate Similarity NPD3539 Phase 1
0.7239 Intermediate Similarity NPD7685 Pre-registration
0.7226 Intermediate Similarity NPD6582 Phase 2
0.7226 Intermediate Similarity NPD6583 Phase 3
0.7222 Intermediate Similarity NPD7074 Phase 3
0.7222 Intermediate Similarity NPD6111 Discontinued
0.7205 Intermediate Similarity NPD3818 Discontinued
0.72 Intermediate Similarity NPD4160 Clinical (unspecified phase)
0.7185 Intermediate Similarity NPD9384 Approved
0.7185 Intermediate Similarity NPD9381 Approved
0.7185 Intermediate Similarity NPD4626 Approved
0.7183 Intermediate Similarity NPD6233 Phase 2
0.7177 Intermediate Similarity NPD1242 Phase 1
0.7174 Intermediate Similarity NPD6696 Suspended
0.7174 Intermediate Similarity NPD2922 Phase 1
0.7174 Intermediate Similarity NPD1283 Approved
0.7171 Intermediate Similarity NPD3687 Approved
0.7171 Intermediate Similarity NPD3686 Approved
0.717 Intermediate Similarity NPD6232 Discontinued
0.7169 Intermediate Similarity NPD8055 Clinical (unspecified phase)
0.7164 Intermediate Similarity NPD3091 Approved
0.716 Intermediate Similarity NPD7054 Approved
0.7153 Intermediate Similarity NPD5314 Approved
0.7152 Intermediate Similarity NPD1512 Approved
0.7143 Intermediate Similarity NPD7473 Discontinued
0.7133 Intermediate Similarity NPD5837 Clinical (unspecified phase)
0.7133 Intermediate Similarity NPD4140 Approved
0.7132 Intermediate Similarity NPD4750 Phase 3
0.7132 Intermediate Similarity NPD3847 Discontinued
0.7125 Intermediate Similarity NPD7184 Clinical (unspecified phase)
0.7123 Intermediate Similarity NPD2935 Discontinued
0.7117 Intermediate Similarity NPD7472 Approved
0.7115 Intermediate Similarity NPD2563 Approved
0.7115 Intermediate Similarity NPD3817 Phase 2
0.7115 Intermediate Similarity NPD6374 Clinical (unspecified phase)
0.7115 Intermediate Similarity NPD2560 Approved
0.7114 Intermediate Similarity NPD2219 Phase 1
0.7113 Intermediate Similarity NPD6859 Clinical (unspecified phase)
0.7113 Intermediate Similarity NPD5718 Phase 2
0.7113 Intermediate Similarity NPD6798 Discontinued
0.7111 Intermediate Similarity NPD1651 Approved
0.7111 Intermediate Similarity NPD5585 Approved
0.7101 Intermediate Similarity NPD9622 Approved
0.7101 Intermediate Similarity NPD1669 Approved
0.7101 Intermediate Similarity NPD5327 Phase 3
0.7099 Intermediate Similarity NPD5535 Approved
0.7086 Intermediate Similarity NPD1754 Clinical (unspecified phase)
0.7083 Intermediate Similarity NPD230 Phase 1
0.7083 Intermediate Similarity NPD4340 Discontinued
0.7081 Intermediate Similarity NPD27 Approved
0.7081 Intermediate Similarity NPD2489 Approved
0.7078 Intermediate Similarity NPD4380 Phase 2
0.7077 Intermediate Similarity NPD9280 Clinical (unspecified phase)
0.7063 Intermediate Similarity NPD1726 Clinical (unspecified phase)
0.7059 Intermediate Similarity NPD17 Approved
0.7059 Intermediate Similarity NPD5126 Approved
0.7059 Intermediate Similarity NPD5125 Phase 3
0.7055 Intermediate Similarity NPD5844 Phase 1

Structure

External Identifiers

PubChem CID   405099
ChEMBL   CHEMBL1760592
ZINC  

Physicochemical Properties

Molecular Weight:  378.17
ALogP:  -2.3305
MLogP:  2.89
XLogP:  0.798
# Rotatable Bonds:  16
Polar Surface Area:  119.61
# H-Bond Aceptor:  3
# H-Bond Donor:  5
# Rings:  2
# Heavy Atoms:  27

Download Data

Data Type Select
General Info & Identifiers & Properties  
Structure MOL file  
Source Organisms  
Biological Activities  
Similar NPs/Drugs