Natural Product: NPC476473

Natural Product ID:  NPC476473
Common Name:   [(1R)-1-(5,8-Dihydroxy-1,4-Dioxonaphthalen-2-Yl)-4-Methylpent-3-Enyl] Benzoate
IUPAC Name:   [(1R)-1-(5,8-dihydroxy-1,4-dioxonaphthalen-2-yl)-4-methylpent-3-enyl] benzoate
Synonyms:  
Molecular Formula:   C23H20O6
Standard InCHIKey:  ICTJEGSRKSUYCN-LJQANCHMSA-N
Standard InCHI:  InChI=1S/C23H20O6/c1-13(2)8-11-19(29-23(28)14-6-4-3-5-7-14)15-12-18(26)20-16(24)9-10-17(25)21(20)22(15)27/h3-10,12,19,24-25H,11H2,1-2H3/t19-/m1/s1
Canonical SMILES:  CC(=CC[C@H](C1=CC(=O)c2c(C1=O)c(O)ccc2O)OC(=O)c1ccccc1)C
First Find Year:  
Max Developmental Stage:  
Synthetic Gene Cluster:   ;

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO11776 Lithospermum erythrorhizon Species Boraginaceae Eukaryota PMID[17157006]

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT143 Individual Protein DNA topoisomerase I Homo sapiens IC50 = 153000 nM 14640515
NPT1214 Individual Protein Acyl coenzyme A:cholesterol acyltransferase 1 Homo sapiens IC50 = 53700 nM 18989978
NPT2584 Individual Protein Acyl coenzyme A:cholesterol acyltransferase 2 Homo sapiens IC50 = 56200 nM 17988094

  Similar Natural Products in NPASS

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC476473 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
0.9926 High Similarity NPC474300
0.9706 High Similarity NPC29771
0.9706 High Similarity NPC111422
0.9706 High Similarity NPC299405
0.9706 High Similarity NPC471602
0.9706 High Similarity NPC256463
0.9706 High Similarity NPC306835
0.9706 High Similarity NPC476477
0.9706 High Similarity NPC216312
0.9635 High Similarity NPC327916
0.9635 High Similarity NPC32749
0.9635 High Similarity NPC241349
0.9635 High Similarity NPC147542
0.9635 High Similarity NPC220496
0.9635 High Similarity NPC37992
0.9635 High Similarity NPC42262
0.9565 High Similarity NPC257003
0.9565 High Similarity NPC471444
0.95 High Similarity NPC89664
0.95 High Similarity NPC274085
0.942 High Similarity NPC295339
0.9348 High Similarity NPC61590
0.9225 High Similarity NPC103910
0.9155 High Similarity NPC21873
0.9051 High Similarity NPC246693
0.9051 High Similarity NPC242358
0.9051 High Similarity NPC110609
0.8966 High Similarity NPC147250
0.8904 High Similarity NPC119767
0.8881 High Similarity NPC124365
0.8865 High Similarity NPC305060
0.8857 High Similarity NPC22222
0.8857 High Similarity NPC281513
0.8828 High Similarity NPC477409
0.8811 High Similarity NPC315578
0.8794 High Similarity NPC141934
0.8774 High Similarity NPC474301
0.875 High Similarity NPC306765
0.8742 High Similarity NPC66029
0.8741 High Similarity NPC1268
0.8741 High Similarity NPC26924
0.8733 High Similarity NPC281272
0.8723 High Similarity NPC27407
0.8716 High Similarity NPC94781
0.8707 High Similarity NPC300540
0.8705 High Similarity NPC205992
0.8675 High Similarity NPC477691
0.8675 High Similarity NPC470408
0.8675 High Similarity NPC182921
0.8675 High Similarity NPC218870
0.8675 High Similarity NPC474824
0.8675 High Similarity NPC474622
0.8675 High Similarity NPC474621
0.8667 High Similarity NPC39819
0.8662 High Similarity NPC272268
0.8658 High Similarity NPC44378
0.8658 High Similarity NPC280753
0.8658 High Similarity NPC120171
0.8639 High Similarity NPC474630
0.8627 High Similarity NPC67197
0.8613 High Similarity NPC96915
0.8613 High Similarity NPC3224
0.8609 High Similarity NPC477690
0.8609 High Similarity NPC474534
0.8609 High Similarity NPC474533
0.8601 High Similarity NPC245923
0.8601 High Similarity NPC261292
0.8601 High Similarity NPC301915
0.86 High Similarity NPC315520
0.86 High Similarity NPC205766
0.8592 High Similarity NPC142027
0.8581 High Similarity NPC470570
0.8571 High Similarity NPC7012
0.8562 High Similarity NPC474861
0.8551 High Similarity NPC471530
0.854 High Similarity NPC103540
0.8535 High Similarity NPC71390
0.8533 High Similarity NPC70764
0.8531 High Similarity NPC474813
0.8521 High Similarity NPC288089
0.8514 High Similarity NPC34482
0.8511 High Similarity NPC477406
0.8511 High Similarity NPC58685
0.8511 High Similarity NPC70622
0.8506 High Similarity NPC29552
0.8503 High Similarity NPC66593
0.8497 Intermediate Similarity NPC3898
0.8493 Intermediate Similarity NPC130485
0.8493 Intermediate Similarity NPC283292
0.8489 Intermediate Similarity NPC282923
0.8487 Intermediate Similarity NPC478220
0.8483 Intermediate Similarity NPC114620
0.8483 Intermediate Similarity NPC477408
0.8483 Intermediate Similarity NPC103337
0.8467 Intermediate Similarity NPC172329
0.8467 Intermediate Similarity NPC2569
0.8467 Intermediate Similarity NPC470479
0.8462 Intermediate Similarity NPC161632
0.8462 Intermediate Similarity NPC283088
0.8456 Intermediate Similarity NPC211565
0.8456 Intermediate Similarity NPC60389
0.8452 Intermediate Similarity NPC477692
0.8451 Intermediate Similarity NPC472591
0.8451 Intermediate Similarity NPC43627
0.8451 Intermediate Similarity NPC115458
0.8446 Intermediate Similarity NPC193703
0.8446 Intermediate Similarity NPC48762
0.8446 Intermediate Similarity NPC21599
0.8446 Intermediate Similarity NPC42540
0.8446 Intermediate Similarity NPC151607
0.8442 Intermediate Similarity NPC313299
0.8442 Intermediate Similarity NPC478027
0.8442 Intermediate Similarity NPC472050
0.844 Intermediate Similarity NPC470831
0.844 Intermediate Similarity NPC214702
0.8431 Intermediate Similarity NPC135522
0.8429 Intermediate Similarity NPC99731
0.8429 Intermediate Similarity NPC146647
0.8429 Intermediate Similarity NPC34414
0.8425 Intermediate Similarity NPC168471
0.8425 Intermediate Similarity NPC155205
0.8418 Intermediate Similarity NPC178281
0.8414 Intermediate Similarity NPC221104
0.8414 Intermediate Similarity NPC478200
0.8414 Intermediate Similarity NPC191835
0.8414 Intermediate Similarity NPC126739
0.8414 Intermediate Similarity NPC197666
0.8414 Intermediate Similarity NPC33144
0.8411 Intermediate Similarity NPC478219
0.8403 Intermediate Similarity NPC291454
0.8397 Intermediate Similarity NPC284495
0.8394 Intermediate Similarity NPC477153
0.8394 Intermediate Similarity NPC375356
0.8392 Intermediate Similarity NPC1249
0.8392 Intermediate Similarity NPC474097
0.8389 Intermediate Similarity NPC474309
0.8389 Intermediate Similarity NPC475923
0.8387 Intermediate Similarity NPC206641
0.8387 Intermediate Similarity NPC208651
0.8387 Intermediate Similarity NPC263483
0.8387 Intermediate Similarity NPC44199
0.8378 Intermediate Similarity NPC469885
0.8378 Intermediate Similarity NPC471731
0.8378 Intermediate Similarity NPC478202
0.8378 Intermediate Similarity NPC159721
0.8377 Intermediate Similarity NPC82190
0.8377 Intermediate Similarity NPC174599
0.8377 Intermediate Similarity NPC192219
0.8369 Intermediate Similarity NPC55949
0.8369 Intermediate Similarity NPC199253
0.8369 Intermediate Similarity NPC475741
0.8369 Intermediate Similarity NPC136588
0.8369 Intermediate Similarity NPC31539
0.8367 Intermediate Similarity NPC478217
0.8367 Intermediate Similarity NPC149533
0.8367 Intermediate Similarity NPC53649
0.8367 Intermediate Similarity NPC472035
0.8367 Intermediate Similarity NPC187843
0.8367 Intermediate Similarity NPC313123
0.8367 Intermediate Similarity NPC478201
0.8367 Intermediate Similarity NPC470842
0.8367 Intermediate Similarity NPC472603
0.8366 Intermediate Similarity NPC175978
0.8366 Intermediate Similarity NPC474843
0.8366 Intermediate Similarity NPC115249
0.8357 Intermediate Similarity NPC48248
0.8355 Intermediate Similarity NPC470568
0.8355 Intermediate Similarity NPC470107
0.8355 Intermediate Similarity NPC295036
0.8355 Intermediate Similarity NPC294646
0.8345 Intermediate Similarity NPC70380
0.8345 Intermediate Similarity NPC471542
0.8345 Intermediate Similarity NPC231774
0.8345 Intermediate Similarity NPC1991
0.8344 Intermediate Similarity NPC24761
0.8344 Intermediate Similarity NPC290695
0.8344 Intermediate Similarity NPC228012
0.8344 Intermediate Similarity NPC5537
0.8344 Intermediate Similarity NPC106524
0.8333 Intermediate Similarity NPC186113
0.8333 Intermediate Similarity NPC74507
0.8333 Intermediate Similarity NPC202112
0.8333 Intermediate Similarity NPC51513
0.8333 Intermediate Similarity NPC285122
0.8333 Intermediate Similarity NPC234890
0.8323 Intermediate Similarity NPC283480
0.8323 Intermediate Similarity NPC478223
0.8323 Intermediate Similarity NPC148323
0.8322 Intermediate Similarity NPC478203
0.8322 Intermediate Similarity NPC126882
0.8322 Intermediate Similarity NPC210966
0.8322 Intermediate Similarity NPC477913
0.8322 Intermediate Similarity NPC314048
0.8322 Intermediate Similarity NPC29932
0.8321 Intermediate Similarity NPC300274
0.8312 Intermediate Similarity NPC137301
0.8312 Intermediate Similarity NPC478218
0.8311 Intermediate Similarity NPC329493
0.8311 Intermediate Similarity NPC471733
0.831 Intermediate Similarity NPC244699

  Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC476473 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.854 High Similarity NPD1470 Approved
0.8533 High Similarity NPD3226 Approved
0.8414 Intermediate Similarity NPD2346 Discontinued
0.8345 Intermediate Similarity NPD2935 Discontinued
0.8248 Intermediate Similarity NPD1201 Approved
0.8112 Intermediate Similarity NPD3764 Approved
0.8077 Intermediate Similarity NPD7819 Suspended
0.7988 Intermediate Similarity NPD8397 Clinical (unspecified phase)
0.7986 Intermediate Similarity NPD2313 Discontinued
0.7976 Intermediate Similarity NPD8150 Discontinued
0.7973 Intermediate Similarity NPD5404 Approved
0.7973 Intermediate Similarity NPD5406 Approved
0.7973 Intermediate Similarity NPD5405 Approved
0.7973 Intermediate Similarity NPD5408 Approved
0.795 Intermediate Similarity NPD6232 Discontinued
0.7941 Intermediate Similarity NPD405 Clinical (unspecified phase)
0.7914 Intermediate Similarity NPD7473 Discontinued
0.7911 Intermediate Similarity NPD5402 Approved
0.7908 Intermediate Similarity NPD2532 Approved
0.7908 Intermediate Similarity NPD2534 Approved
0.7908 Intermediate Similarity NPD2533 Approved
0.7905 Intermediate Similarity NPD2799 Discontinued
0.7905 Intermediate Similarity NPD1509 Clinical (unspecified phase)
0.7895 Intermediate Similarity NPD7879 Clinical (unspecified phase)
0.7881 Intermediate Similarity NPD3750 Approved
0.7815 Intermediate Similarity NPD7421 Clinical (unspecified phase)
0.7798 Intermediate Similarity NPD8312 Approved
0.7798 Intermediate Similarity NPD8313 Approved
0.7763 Intermediate Similarity NPD1878 Clinical (unspecified phase)
0.7748 Intermediate Similarity NPD970 Clinical (unspecified phase)
0.7736 Intermediate Similarity NPD2393 Clinical (unspecified phase)
0.7733 Intermediate Similarity NPD1551 Phase 2
0.7711 Intermediate Similarity NPD5844 Phase 1
0.7708 Intermediate Similarity NPD2798 Approved
0.7707 Intermediate Similarity NPD5808 Clinical (unspecified phase)
0.7702 Intermediate Similarity NPD7075 Discontinued
0.7681 Intermediate Similarity NPD9493 Approved
0.7677 Intermediate Similarity NPD4378 Clinical (unspecified phase)
0.7669 Intermediate Similarity NPD6959 Discontinued
0.7667 Intermediate Similarity NPD1510 Phase 2
0.7658 Intermediate Similarity NPD4380 Phase 2
0.7647 Intermediate Similarity NPD4628 Phase 3
0.764 Intermediate Similarity NPD7768 Phase 2
0.7632 Intermediate Similarity NPD1549 Phase 2
0.7625 Intermediate Similarity NPD7096 Clinical (unspecified phase)
0.7625 Intermediate Similarity NPD2801 Approved
0.761 Intermediate Similarity NPD7411 Suspended
0.7571 Intermediate Similarity NPD9545 Approved
0.7566 Intermediate Similarity NPD1552 Clinical (unspecified phase)
0.7566 Intermediate Similarity NPD1550 Clinical (unspecified phase)
0.7566 Intermediate Similarity NPD2343 Clinical (unspecified phase)
0.7564 Intermediate Similarity NPD7422 Clinical (unspecified phase)
0.7562 Intermediate Similarity NPD1934 Approved
0.755 Intermediate Similarity NPD3748 Approved
0.7548 Intermediate Similarity NPD3300 Phase 2
0.7533 Intermediate Similarity NPD1607 Approved
0.7532 Intermediate Similarity NPD7003 Approved
0.7532 Intermediate Similarity NPD8166 Discontinued
0.7532 Intermediate Similarity NPD6398 Clinical (unspecified phase)
0.7517 Intermediate Similarity NPD1240 Approved
0.7517 Intermediate Similarity NPD1203 Approved
0.7516 Intermediate Similarity NPD6273 Approved
0.75 Intermediate Similarity NPD1699 Clinical (unspecified phase)
0.75 Intermediate Similarity NPD2796 Approved
0.75 Intermediate Similarity NPD7390 Discontinued
0.75 Intermediate Similarity NPD6535 Approved
0.75 Intermediate Similarity NPD6534 Approved
0.75 Intermediate Similarity NPD5494 Approved
0.7485 Intermediate Similarity NPD3749 Approved
0.7483 Intermediate Similarity NPD6832 Phase 2
0.7483 Intermediate Similarity NPD1547 Clinical (unspecified phase)
0.7471 Intermediate Similarity NPD6559 Discontinued
0.7469 Intermediate Similarity NPD8443 Clinical (unspecified phase)
0.7468 Intermediate Similarity NPD5403 Approved
0.7467 Intermediate Similarity NPD1899 Clinical (unspecified phase)
0.7459 Intermediate Similarity NPD7435 Discontinued
0.7457 Intermediate Similarity NPD8434 Phase 2
0.7453 Intermediate Similarity NPD6844 Discontinued
0.7453 Intermediate Similarity NPD6801 Discontinued
0.7451 Intermediate Similarity NPD2344 Approved
0.7443 Intermediate Similarity NPD6213 Phase 3
0.7443 Intermediate Similarity NPD6214 Clinical (unspecified phase)
0.7443 Intermediate Similarity NPD6212 Phase 3
0.7438 Intermediate Similarity NPD6599 Discontinued
0.7432 Intermediate Similarity NPD5952 Clinical (unspecified phase)
0.7425 Intermediate Similarity NPD7852 Clinical (unspecified phase)
0.7423 Intermediate Similarity NPD4868 Clinical (unspecified phase)
0.7397 Intermediate Similarity NPD1164 Approved
0.7389 Intermediate Similarity NPD6781 Approved
0.7389 Intermediate Similarity NPD6778 Approved
0.7389 Intermediate Similarity NPD6779 Approved
0.7389 Intermediate Similarity NPD6780 Approved
0.7389 Intermediate Similarity NPD6799 Approved
0.7389 Intermediate Similarity NPD6777 Approved
0.7389 Intermediate Similarity NPD6782 Approved
0.7389 Intermediate Similarity NPD6776 Approved
0.7378 Intermediate Similarity NPD4381 Clinical (unspecified phase)
0.7374 Intermediate Similarity NPD7700 Phase 2
0.7374 Intermediate Similarity NPD7699 Phase 2
0.7372 Intermediate Similarity NPD6190 Approved
0.7362 Intermediate Similarity NPD3817 Phase 2
0.7353 Intermediate Similarity NPD2182 Approved
0.7351 Intermediate Similarity NPD230 Phase 1
0.7351 Intermediate Similarity NPD447 Suspended
0.7342 Intermediate Similarity NPD7410 Clinical (unspecified phase)
0.7342 Intermediate Similarity NPD5401 Approved
0.7342 Intermediate Similarity NPD7004 Clinical (unspecified phase)
0.7337 Intermediate Similarity NPD7177 Discontinued
0.7337 Intermediate Similarity NPD3818 Discontinued
0.7333 Intermediate Similarity NPD6663 Approved
0.7329 Intermediate Similarity NPD1283 Approved
0.7326 Intermediate Similarity NPD4338 Clinical (unspecified phase)
0.732 Intermediate Similarity NPD7033 Discontinued
0.732 Intermediate Similarity NPD4308 Phase 3
0.7317 Intermediate Similarity NPD3882 Suspended
0.7315 Intermediate Similarity NPD7008 Discontinued
0.731 Intermediate Similarity NPD1608 Approved
0.731 Intermediate Similarity NPD9717 Approved
0.7305 Intermediate Similarity NPD5710 Approved
0.7305 Intermediate Similarity NPD5711 Approved
0.7297 Intermediate Similarity NPD5736 Approved
0.7285 Intermediate Similarity NPD943 Approved
0.7285 Intermediate Similarity NPD2979 Phase 3
0.7279 Intermediate Similarity NPD2797 Approved
0.7278 Intermediate Similarity NPD1511 Approved
0.7268 Intermediate Similarity NPD7697 Approved
0.7268 Intermediate Similarity NPD7698 Approved
0.7268 Intermediate Similarity NPD7696 Phase 3
0.7267 Intermediate Similarity NPD411 Approved
0.7267 Intermediate Similarity NPD3268 Approved
0.7267 Intermediate Similarity NPD7458 Discontinued
0.7261 Intermediate Similarity NPD2309 Approved
0.7246 Intermediate Similarity NPD2181 Clinical (unspecified phase)
0.7239 Intermediate Similarity NPD37 Approved
0.7235 Intermediate Similarity NPD3751 Discontinued
0.7229 Intermediate Similarity NPD6234 Discontinued
0.7228 Intermediate Similarity NPD8319 Approved
0.7228 Intermediate Similarity NPD7871 Phase 2
0.7228 Intermediate Similarity NPD8320 Phase 1
0.7228 Intermediate Similarity NPD7870 Phase 2
0.7226 Intermediate Similarity NPD1471 Phase 3
0.7222 Intermediate Similarity NPD4626 Approved
0.7222 Intermediate Similarity NPD2932 Approved
0.7219 Intermediate Similarity NPD6166 Phase 2
0.7219 Intermediate Similarity NPD6167 Clinical (unspecified phase)
0.7219 Intermediate Similarity NPD7875 Clinical (unspecified phase)
0.7219 Intermediate Similarity NPD7874 Approved
0.7219 Intermediate Similarity NPD6168 Clinical (unspecified phase)
0.7213 Intermediate Similarity NPD6823 Phase 2
0.7212 Intermediate Similarity NPD4965 Approved
0.7212 Intermediate Similarity NPD4966 Approved
0.7212 Intermediate Similarity NPD4967 Phase 2
0.7209 Intermediate Similarity NPD5953 Discontinued
0.72 Intermediate Similarity NPD8055 Clinical (unspecified phase)
0.7188 Intermediate Similarity NPD1512 Approved
0.7181 Intermediate Similarity NPD2861 Phase 2
0.7172 Intermediate Similarity NPD3496 Discontinued
0.7171 Intermediate Similarity NPD4060 Phase 1
0.7163 Intermediate Similarity NPD5951 Approved
0.7153 Intermediate Similarity NPD5691 Approved
0.7151 Intermediate Similarity NPD7074 Phase 3
0.7143 Intermediate Similarity NPD920 Approved
0.7135 Intermediate Similarity NPD7893 Clinical (unspecified phase)
0.7134 Intermediate Similarity NPD2800 Approved
0.7123 Intermediate Similarity NPD1281 Approved
0.7123 Intermediate Similarity NPD1611 Approved
0.7114 Intermediate Similarity NPD6007 Clinical (unspecified phase)
0.7112 Intermediate Similarity NPD7701 Phase 2
0.7107 Intermediate Similarity NPD7236 Approved
0.7103 Intermediate Similarity NPD3412 Clinical (unspecified phase)
0.7103 Intermediate Similarity NPD3019 Approved
0.7103 Intermediate Similarity NPD17 Approved
0.7101 Intermediate Similarity NPD74 Approved
0.7101 Intermediate Similarity NPD9266 Approved
0.7097 Intermediate Similarity NPD651 Clinical (unspecified phase)
0.7097 Intermediate Similarity NPD7211 Clinical (unspecified phase)
0.7095 Intermediate Similarity NPD1876 Approved
0.7093 Intermediate Similarity NPD7804 Clinical (unspecified phase)
0.7093 Intermediate Similarity NPD7054 Approved
0.7093 Intermediate Similarity NPD7286 Phase 2
0.7091 Intermediate Similarity NPD1465 Phase 2
0.7063 Intermediate Similarity NPD6143 Clinical (unspecified phase)
0.7059 Intermediate Similarity NPD4307 Phase 2
0.7059 Intermediate Similarity NPD164 Approved
0.7055 Intermediate Similarity NPD6591 Clinical (unspecified phase)
0.7052 Intermediate Similarity NPD7472 Approved
0.7051 Intermediate Similarity NPD4477 Approved
0.7051 Intermediate Similarity NPD2438 Suspended
0.7051 Intermediate Similarity NPD6100 Approved
0.7051 Intermediate Similarity NPD6099 Approved
0.7051 Intermediate Similarity NPD4476 Approved
0.7039 Intermediate Similarity NPD6798 Discontinued
0.7039 Intermediate Similarity NPD6859 Clinical (unspecified phase)
0.7034 Intermediate Similarity NPD1651 Approved
0.7029 Intermediate Similarity NPD9267 Approved
0.7029 Intermediate Similarity NPD9264 Approved
0.7029 Intermediate Similarity NPD9263 Approved
0.7021 Intermediate Similarity NPD7635 Approved
0.7019 Intermediate Similarity NPD642 Clinical (unspecified phase)
0.7013 Intermediate Similarity NPD1933 Approved

Structure

External Identifiers

PubChem CID   10475609
ChEMBL   CHEMBL8805
ZINC  

Physicochemical Properties

Molecular Weight:  392.13
ALogP:  0.3876
MLogP:  3.33
XLogP:  3.915
# Rotatable Bonds:  10
Polar Surface Area:  100.9
# H-Bond Aceptor:  4
# H-Bond Donor:  2
# Rings:  3
# Heavy Atoms:  29

Download Data

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General Info & Identifiers & Properties  
Structure MOL file  
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Biological Activities  
Similar NPs/Drugs