Natural Product: NPC36852

Natural Product ID:  NPC36852
Common Name:   Cratoxyarborenone E
IUPAC Name:   1,3,7-trihydroxy-6-methoxy-4,5-bis(3-methylbut-2-enyl)xanthen-9-one
Synonyms:   cratoxyarborenone E
Molecular Formula:   C24H26O6
Standard InCHIKey:  CJBZJZGULKATPY-UHFFFAOYSA-N
Standard InCHI:  InChI=1S/C24H26O6/c1-12(2)6-8-14-17(25)11-18(26)20-21(28)16-10-19(27)23(29-5)15(9-7-13(3)4)22(16)30-24(14)20/h6-7,10-11,25-27H,8-9H2,1-5H3
Canonical SMILES:  COc1c(O)cc2c(c1CC=C(C)C)oc1c(c2=O)c(O)cc(c1CC=C(C)C)O
First Find Year:  
Max Developmental Stage:  
Synthetic Gene Cluster:   ;

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO19501 Pseudosuberites hyalinus Species Suberitidae Eukaryota UNPD*
NPO16745 Scorzonera judaica Species Asteraceae Eukaryota UNPD*
NPO14950 Ardisia polycephala Species Primulaceae Eukaryota UNPD*
NPO19560 Populus italica Species Salicaceae Eukaryota UNPD*
NPO6106 Hymeniacidon perlevis Species Halichondriidae Eukaryota UNPD*
NPO17438 Polygala virgata Species Polygalaceae Eukaryota UNPD*
NPO11770 Amphicome emodi NA NA NA UNPD*
NPO9520 Cratoxylum sumatranum Species Hypericaceae Eukaryota UNPD*
NPO18995 Gaultheria itoana Species Ericaceae Eukaryota UNPD*
NPO19227 Hippoglossus hippoglossus Species Pleuronectidae Eukaryota UNPD*
NPO18657 Galanthus gracilis Species Amaryllidaceae Eukaryota UNPD*
NPO19359 Parmotrema delicatulum Species Parmeliaceae Eukaryota UNPD*
NPO16038 Ribes rubrum Species Grossulariaceae Eukaryota UNPD*
NPO9520 Cratoxylum sumatranum Species Hypericaceae Eukaryota Leaves PMID[11908969]
NPO9520 Cratoxylum sumatranum Species Hypericaceae Eukaryota Twigs PMID[11908969]
NPO9520 Cratoxylum sumatranum Species Hypericaceae Eukaryota Stems PMID[11908969]
NPO18005 Artemisia leucodes Species Asteraceae Eukaryota UNPD*
NPO13263 Verbena brasiliensis Species Verbenaceae Eukaryota UNPD*

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT91 Cell Line KB Homo sapiens EC50 = 4.3 ug/ml 11908969

  Similar Natural Products in NPASS

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC36852 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
1.0 High Similarity NPC262286
0.9933 High Similarity NPC138243
0.9867 High Similarity NPC78225
0.9866 High Similarity NPC113906
0.98 High Similarity NPC68093
0.98 High Similarity NPC191146
0.9739 High Similarity NPC472448
0.9739 High Similarity NPC83922
0.9737 High Similarity NPC56085
0.9737 High Similarity NPC14353
0.9737 High Similarity NPC228785
0.9737 High Similarity NPC476980
0.9735 High Similarity NPC223787
0.9733 High Similarity NPC117992
0.9733 High Similarity NPC168247
0.9733 High Similarity NPC152951
0.9733 High Similarity NPC230149
0.9733 High Similarity NPC57674
0.9732 High Similarity NPC101996
0.9673 High Similarity NPC167678
0.9673 High Similarity NPC266314
0.9673 High Similarity NPC61010
0.9673 High Similarity NPC40491
0.9673 High Similarity NPC29876
0.9673 High Similarity NPC258331
0.9673 High Similarity NPC278052
0.9671 High Similarity NPC100123
0.9671 High Similarity NPC95936
0.9671 High Similarity NPC250214
0.9669 High Similarity NPC472916
0.9667 High Similarity NPC271779
0.9667 High Similarity NPC49402
0.9667 High Similarity NPC206238
0.9667 High Similarity NPC292214
0.9667 High Similarity NPC227337
0.9667 High Similarity NPC273462
0.9667 High Similarity NPC70433
0.9667 High Similarity NPC88645
0.9667 High Similarity NPC33051
0.9667 High Similarity NPC167091
0.9664 High Similarity NPC171010
0.961 High Similarity NPC81679
0.9608 High Similarity NPC204290
0.9608 High Similarity NPC246478
0.9608 High Similarity NPC320359
0.9605 High Similarity NPC210084
0.9605 High Similarity NPC291508
0.9605 High Similarity NPC300727
0.9605 High Similarity NPC48208
0.9605 High Similarity NPC472910
0.9605 High Similarity NPC469584
0.9605 High Similarity NPC476981
0.9605 High Similarity NPC165977
0.9605 High Similarity NPC474208
0.9605 High Similarity NPC472913
0.9605 High Similarity NPC156057
0.9605 High Similarity NPC241904
0.9605 High Similarity NPC96167
0.9605 High Similarity NPC475267
0.9605 High Similarity NPC474836
0.9605 High Similarity NPC472911
0.9605 High Similarity NPC162869
0.9605 High Similarity NPC245758
0.9605 High Similarity NPC99597
0.9605 High Similarity NPC222814
0.9605 High Similarity NPC217677
0.9605 High Similarity NPC472914
0.9603 High Similarity NPC256612
0.9603 High Similarity NPC2928
0.9603 High Similarity NPC20830
0.9603 High Similarity NPC130589
0.9603 High Similarity NPC134287
0.9603 High Similarity NPC256925
0.9603 High Similarity NPC208197
0.9603 High Similarity NPC470327
0.9603 High Similarity NPC477503
0.9603 High Similarity NPC45849
0.9603 High Similarity NPC200761
0.96 High Similarity NPC120537
0.96 High Similarity NPC39007
0.96 High Similarity NPC471982
0.96 High Similarity NPC161277
0.96 High Similarity NPC180234
0.96 High Similarity NPC199100
0.9597 High Similarity NPC179183
0.9548 High Similarity NPC152659
0.9548 High Similarity NPC236132
0.9548 High Similarity NPC248638
0.9548 High Similarity NPC7483
0.9548 High Similarity NPC236521
0.9548 High Similarity NPC41301
0.9548 High Similarity NPC220313
0.9545 High Similarity NPC134783
0.9545 High Similarity NPC259456
0.9545 High Similarity NPC472275
0.9542 High Similarity NPC172770
0.9542 High Similarity NPC185258
0.9542 High Similarity NPC204879
0.9542 High Similarity NPC476242
0.9539 High Similarity NPC274730
0.9539 High Similarity NPC472626
0.9539 High Similarity NPC278778
0.9539 High Similarity NPC255106
0.9539 High Similarity NPC235165
0.9539 High Similarity NPC291878
0.9539 High Similarity NPC472455
0.9539 High Similarity NPC209614
0.9539 High Similarity NPC35038
0.9539 High Similarity NPC195796
0.9539 High Similarity NPC470328
0.9539 High Similarity NPC142339
0.9536 High Similarity NPC274327
0.9536 High Similarity NPC472915
0.9536 High Similarity NPC47781
0.9536 High Similarity NPC280937
0.9536 High Similarity NPC250822
0.9536 High Similarity NPC231018
0.9536 High Similarity NPC255350
0.9536 High Similarity NPC276409
0.9536 High Similarity NPC176775
0.9536 High Similarity NPC183878
0.9536 High Similarity NPC145379
0.9536 High Similarity NPC69394
0.9536 High Similarity NPC160951
0.9536 High Similarity NPC22519
0.9536 High Similarity NPC75279
0.9533 High Similarity NPC149614
0.9533 High Similarity NPC117579
0.9533 High Similarity NPC251110
0.9487 High Similarity NPC275780
0.9487 High Similarity NPC326520
0.9487 High Similarity NPC239752
0.9487 High Similarity NPC472450
0.9484 High Similarity NPC220912
0.9484 High Similarity NPC25152
0.9484 High Similarity NPC261470
0.9481 High Similarity NPC475886
0.9481 High Similarity NPC474287
0.9477 High Similarity NPC78103
0.9477 High Similarity NPC181960
0.9477 High Similarity NPC129684
0.9477 High Similarity NPC219867
0.9477 High Similarity NPC161960
0.9477 High Similarity NPC304008
0.9477 High Similarity NPC187745
0.9477 High Similarity NPC299520
0.9477 High Similarity NPC79053
0.9477 High Similarity NPC52889
0.9477 High Similarity NPC474681
0.9477 High Similarity NPC472598
0.9477 High Similarity NPC236796
0.9477 High Similarity NPC218313
0.9477 High Similarity NPC474055
0.9477 High Similarity NPC27337
0.9477 High Similarity NPC180011
0.9474 High Similarity NPC163780
0.9474 High Similarity NPC472909
0.9474 High Similarity NPC50715
0.9474 High Similarity NPC227325
0.9474 High Similarity NPC196439
0.9474 High Similarity NPC167815
0.9474 High Similarity NPC472280
0.9474 High Similarity NPC2476
0.9474 High Similarity NPC201136
0.9474 High Similarity NPC146165
0.9474 High Similarity NPC213622
0.9474 High Similarity NPC4455
0.9474 High Similarity NPC37392
0.9474 High Similarity NPC138360
0.9474 High Similarity NPC280339
0.9474 High Similarity NPC92659
0.9474 High Similarity NPC183597
0.9474 High Similarity NPC39184
0.9474 High Similarity NPC234255
0.9474 High Similarity NPC128863
0.947 High Similarity NPC275722
0.947 High Similarity NPC301323
0.947 High Similarity NPC188203
0.947 High Similarity NPC106976
0.947 High Similarity NPC83508
0.947 High Similarity NPC162313
0.947 High Similarity NPC275836
0.947 High Similarity NPC198826
0.947 High Similarity NPC256283
0.947 High Similarity NPC477231
0.947 High Similarity NPC25270
0.947 High Similarity NPC241498
0.947 High Similarity NPC249570
0.947 High Similarity NPC239128
0.947 High Similarity NPC120163
0.947 High Similarity NPC60972
0.947 High Similarity NPC100887
0.947 High Similarity NPC187498
0.947 High Similarity NPC39732
0.947 High Similarity NPC293183
0.947 High Similarity NPC71334
0.947 High Similarity NPC257648
0.947 High Similarity NPC212678
0.947 High Similarity NPC57030
0.947 High Similarity NPC131624

  Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC36852 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.9536 High Similarity NPD2801 Approved
0.9408 High Similarity NPD2393 Clinical (unspecified phase)
0.9342 High Similarity NPD1934 Approved
0.9038 High Similarity NPD3882 Suspended
0.8987 High Similarity NPD5494 Approved
0.894 High Similarity NPD1511 Approved
0.8882 High Similarity NPD6167 Clinical (unspecified phase)
0.8882 High Similarity NPD6168 Clinical (unspecified phase)
0.8882 High Similarity NPD6166 Phase 2
0.8824 High Similarity NPD1512 Approved
0.8797 High Similarity NPD4868 Clinical (unspecified phase)
0.8773 High Similarity NPD3818 Discontinued
0.8758 High Similarity NPD4378 Clinical (unspecified phase)
0.8718 High Similarity NPD4380 Phase 2
0.8667 High Similarity NPD7074 Phase 3
0.8625 High Similarity NPD7075 Discontinued
0.8623 High Similarity NPD4338 Clinical (unspecified phase)
0.8616 High Similarity NPD3817 Phase 2
0.8606 High Similarity NPD7054 Approved
0.8554 High Similarity NPD7472 Approved
0.8553 High Similarity NPD7096 Clinical (unspecified phase)
0.8528 High Similarity NPD6232 Discontinued
0.8494 Intermediate Similarity NPD5844 Phase 1
0.8487 Intermediate Similarity NPD1549 Phase 2
0.8485 Intermediate Similarity NPD7473 Discontinued
0.8438 Intermediate Similarity NPD7819 Suspended
0.8438 Intermediate Similarity NPD1465 Phase 2
0.8421 Intermediate Similarity NPD1550 Clinical (unspecified phase)
0.8421 Intermediate Similarity NPD1552 Clinical (unspecified phase)
0.8397 Intermediate Similarity NPD7410 Clinical (unspecified phase)
0.8395 Intermediate Similarity NPD4381 Clinical (unspecified phase)
0.8393 Intermediate Similarity NPD6797 Phase 2
0.8354 Intermediate Similarity NPD1247 Approved
0.8343 Intermediate Similarity NPD7251 Discontinued
0.8313 Intermediate Similarity NPD7411 Suspended
0.8294 Intermediate Similarity NPD7808 Phase 3
0.8289 Intermediate Similarity NPD1510 Phase 2
0.8284 Intermediate Similarity NPD7993 Clinical (unspecified phase)
0.8272 Intermediate Similarity NPD8443 Clinical (unspecified phase)
0.8267 Intermediate Similarity NPD1240 Approved
0.8267 Intermediate Similarity NPD943 Approved
0.8261 Intermediate Similarity NPD6801 Discontinued
0.8242 Intermediate Similarity NPD6959 Discontinued
0.8235 Intermediate Similarity NPD2796 Approved
0.8235 Intermediate Similarity NPD2935 Discontinued
0.8217 Intermediate Similarity NPD6799 Approved
0.8166 Intermediate Similarity NPD7804 Clinical (unspecified phase)
0.816 Intermediate Similarity NPD5402 Approved
0.8158 Intermediate Similarity NPD1607 Approved
0.8129 Intermediate Similarity NPD6559 Discontinued
0.8077 Intermediate Similarity NPD2800 Approved
0.8054 Intermediate Similarity NPD1530 Clinical (unspecified phase)
0.8036 Intermediate Similarity NPD3926 Phase 2
0.8025 Intermediate Similarity NPD6599 Discontinued
0.8012 Intermediate Similarity NPD919 Approved
0.8 Intermediate Similarity NPD1529 Clinical (unspecified phase)
0.7988 Intermediate Similarity NPD7852 Clinical (unspecified phase)
0.7974 Intermediate Similarity NPD230 Phase 1
0.7937 Intermediate Similarity NPD2532 Approved
0.7937 Intermediate Similarity NPD2533 Approved
0.7937 Intermediate Similarity NPD2534 Approved
0.791 Intermediate Similarity NPD8397 Clinical (unspecified phase)
0.7908 Intermediate Similarity NPD1612 Clinical (unspecified phase)
0.7908 Intermediate Similarity NPD1613 Approved
0.7898 Intermediate Similarity NPD970 Clinical (unspecified phase)
0.7892 Intermediate Similarity NPD7768 Phase 2
0.7857 Intermediate Similarity NPD447 Suspended
0.7848 Intermediate Similarity NPD7421 Clinical (unspecified phase)
0.7844 Intermediate Similarity NPD3749 Approved
0.784 Intermediate Similarity NPD6980 Clinical (unspecified phase)
0.7821 Intermediate Similarity NPD1509 Clinical (unspecified phase)
0.7814 Intermediate Similarity NPD7501 Clinical (unspecified phase)
0.7799 Intermediate Similarity NPD3750 Approved
0.7744 Intermediate Similarity NPD3226 Approved
0.7736 Intermediate Similarity NPD1243 Approved
0.773 Intermediate Similarity NPD920 Approved
0.773 Intermediate Similarity NPD5403 Approved
0.7722 Intermediate Similarity NPD2346 Discontinued
0.7722 Intermediate Similarity NPD7879 Clinical (unspecified phase)
0.7712 Intermediate Similarity NPD3027 Phase 3
0.7707 Intermediate Similarity NPD2799 Discontinued
0.7707 Intermediate Similarity NPD651 Clinical (unspecified phase)
0.7692 Intermediate Similarity NPD6234 Discontinued
0.7692 Intermediate Similarity NPD6651 Approved
0.7683 Intermediate Similarity NPD1653 Approved
0.7662 Intermediate Similarity NPD2313 Discontinued
0.7658 Intermediate Similarity NPD1551 Phase 2
0.7658 Intermediate Similarity NPD6100 Approved
0.7658 Intermediate Similarity NPD6099 Approved
0.7657 Intermediate Similarity NPD5953 Discontinued
0.7644 Intermediate Similarity NPD7286 Phase 2
0.764 Intermediate Similarity NPD8055 Clinical (unspecified phase)
0.7628 Intermediate Similarity NPD1933 Approved
0.761 Intermediate Similarity NPD2344 Approved
0.7607 Intermediate Similarity NPD642 Clinical (unspecified phase)
0.7607 Intermediate Similarity NPD5401 Approved
0.7586 Intermediate Similarity NPD3751 Discontinued
0.7582 Intermediate Similarity NPD9494 Approved
0.7578 Intermediate Similarity NPD6398 Clinical (unspecified phase)
0.7578 Intermediate Similarity NPD4628 Phase 3
0.755 Intermediate Similarity NPD4379 Clinical (unspecified phase)
0.7548 Intermediate Similarity NPD6859 Clinical (unspecified phase)
0.7546 Intermediate Similarity NPD7390 Discontinued
0.7546 Intermediate Similarity NPD6143 Clinical (unspecified phase)
0.7531 Intermediate Similarity NPD6190 Approved
0.75 Intermediate Similarity NPD7199 Phase 2
0.75 Intermediate Similarity NPD37 Approved
0.7486 Intermediate Similarity NPD7228 Approved
0.7485 Intermediate Similarity NPD643 Clinical (unspecified phase)
0.7484 Intermediate Similarity NPD3748 Approved
0.7472 Intermediate Similarity NPD4419 Clinical (unspecified phase)
0.7471 Intermediate Similarity NPD4965 Approved
0.7471 Intermediate Similarity NPD4967 Phase 2
0.7471 Intermediate Similarity NPD4966 Approved
0.7469 Intermediate Similarity NPD1878 Clinical (unspecified phase)
0.7457 Intermediate Similarity NPD5710 Approved
0.7457 Intermediate Similarity NPD3787 Discontinued
0.7457 Intermediate Similarity NPD5711 Approved
0.7436 Intermediate Similarity NPD4907 Clinical (unspecified phase)
0.7433 Intermediate Similarity NPD6779 Approved
0.7433 Intermediate Similarity NPD6776 Approved
0.7433 Intermediate Similarity NPD6780 Approved
0.7433 Intermediate Similarity NPD6781 Approved
0.7433 Intermediate Similarity NPD6782 Approved
0.7433 Intermediate Similarity NPD6777 Approved
0.7433 Intermediate Similarity NPD6778 Approved
0.743 Intermediate Similarity NPD8312 Approved
0.743 Intermediate Similarity NPD8313 Approved
0.7423 Intermediate Similarity NPD2309 Approved
0.7414 Intermediate Similarity NPD7184 Clinical (unspecified phase)
0.7394 Intermediate Similarity NPD7422 Clinical (unspecified phase)
0.7368 Intermediate Similarity NPD9269 Phase 2
0.7338 Intermediate Similarity NPD1203 Approved
0.7318 Intermediate Similarity NPD7685 Pre-registration
0.7316 Intermediate Similarity NPD7435 Discontinued
0.7314 Intermediate Similarity NPD5242 Approved
0.731 Intermediate Similarity NPD5353 Approved
0.7308 Intermediate Similarity NPD8150 Discontinued
0.7308 Intermediate Similarity NPD8434 Phase 2
0.7308 Intermediate Similarity NPD4908 Phase 1
0.7306 Intermediate Similarity NPD8151 Discontinued
0.7303 Intermediate Similarity NPD1547 Clinical (unspecified phase)
0.7294 Intermediate Similarity NPD6844 Discontinued
0.7273 Intermediate Similarity NPD8090 Clinical (unspecified phase)
0.7261 Intermediate Similarity NPD4625 Phase 3
0.7258 Intermediate Similarity NPD4360 Phase 2
0.7258 Intermediate Similarity NPD4363 Phase 3
0.7235 Intermediate Similarity NPD7615 Clinical (unspecified phase)
0.7225 Intermediate Similarity NPD7697 Approved
0.7225 Intermediate Similarity NPD7698 Approved
0.7225 Intermediate Similarity NPD7696 Phase 3
0.7202 Intermediate Similarity NPD7584 Approved
0.7197 Intermediate Similarity NPD6832 Phase 2
0.719 Intermediate Similarity NPD1610 Phase 2
0.7188 Intermediate Similarity NPD7871 Phase 2
0.7188 Intermediate Similarity NPD7870 Phase 2
0.7188 Intermediate Similarity NPD1899 Clinical (unspecified phase)
0.7179 Intermediate Similarity NPD2798 Approved
0.7175 Intermediate Similarity NPD2403 Approved
0.7173 Intermediate Similarity NPD6823 Phase 2
0.7166 Intermediate Similarity NPD6534 Approved
0.7166 Intermediate Similarity NPD6535 Approved
0.7165 Intermediate Similarity NPD7701 Phase 2
0.7159 Intermediate Similarity NPD7229 Phase 3
0.715 Intermediate Similarity NPD2899 Discontinued
0.7143 Intermediate Similarity NPD7783 Phase 2
0.7143 Intermediate Similarity NPD9717 Approved
0.7143 Intermediate Similarity NPD7782 Clinical (unspecified phase)
0.7135 Intermediate Similarity NPD6386 Approved
0.7135 Intermediate Similarity NPD6385 Approved
0.7134 Intermediate Similarity NPD2424 Discontinued
0.7134 Intermediate Similarity NPD2861 Phase 2
0.7126 Intermediate Similarity NPD4357 Discontinued
0.7118 Intermediate Similarity NPD5808 Clinical (unspecified phase)
0.7118 Intermediate Similarity NPD7458 Discontinued
0.7115 Intermediate Similarity NPD1470 Approved
0.7107 Intermediate Similarity NPD3268 Approved
0.7105 Intermediate Similarity NPD9268 Approved
0.7097 Intermediate Similarity NPD4749 Approved
0.7092 Intermediate Similarity NPD7874 Approved
0.7092 Intermediate Similarity NPD7875 Clinical (unspecified phase)
0.7091 Intermediate Similarity NPD2654 Approved
0.7088 Intermediate Similarity NPD7549 Discontinued
0.7086 Intermediate Similarity NPD5536 Phase 2
0.7083 Intermediate Similarity NPD7004 Clinical (unspecified phase)
0.7063 Intermediate Similarity NPD6233 Phase 2
0.7056 Intermediate Similarity NPD7801 Approved
0.7055 Intermediate Similarity NPD7033 Discontinued
0.7055 Intermediate Similarity NPD4308 Phase 3
0.7053 Intermediate Similarity NPD7700 Phase 2
0.7053 Intermediate Similarity NPD7699 Phase 2
0.7039 Intermediate Similarity NPD1548 Phase 1
0.7037 Intermediate Similarity NPD4362 Clinical (unspecified phase)
0.7037 Intermediate Similarity NPD4361 Phase 2
0.7033 Intermediate Similarity NPD7240 Approved
0.7032 Intermediate Similarity NPD1608 Approved
0.7025 Intermediate Similarity NPD3018 Phase 2
0.7019 Intermediate Similarity NPD4060 Phase 1
0.7017 Intermediate Similarity NPD1729 Discontinued
0.7012 Intermediate Similarity NPD5405 Approved

Structure

External Identifiers

PubChem CID   5323543
ChEMBL   CHEMBL462716
ZINC  

Physicochemical Properties

Molecular Weight:  410.17
ALogP:  1.9042
MLogP:  3.44
XLogP:  3.11
# Rotatable Bonds:  13
Polar Surface Area:  96.22
# H-Bond Aceptor:  1
# H-Bond Donor:  3
# Rings:  3
# Heavy Atoms:  30

Download Data

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General Info & Identifiers & Properties  
Structure MOL file  
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Biological Activities  
Similar NPs/Drugs