Natural Product: NPC315210

Natural Product ID:  NPC315210
Common Name:   2-[(4E)-4-[(2Z,4E)-6-(2,5-Dimethylspiro[4,9-Dioxabicyclo[3.3.1]Non-7-Ene-6,2'-Oxirane]-3-Yl)-1-Hydroxy-4-Methylhepta-2,4-Dienylidene]-1-(5-Hydroxy-6-Methyloxan-2-Yl)-3,5-Dioxopyrrolidin-2-Yl]-N-Methylpropanamide
IUPAC Name:   2-[(4E)-4-[(2Z,4E)-6-(2,5-dimethylspiro[4,9-dioxabicyclo[3.3.1]non-7-ene-6,2'-oxirane]-3-yl)-1-hydroxy-4-methylhepta-2,4-dienylidene]-1-(5-hydroxy-6-methyloxan-2-yl)-3,5-dioxopyrrolidin-2-yl]-N-methylpropanamide
Synonyms:  
Molecular Formula:   C32H44N2O9
Standard InCHIKey:  KVTPRMVXYZKLIG-UGUDKILOSA-N
Standard InCHI:  InChI=1S/C32H44N2O9/c1-16(14-17(2)28-18(3)23-12-13-32(15-40-32)31(6,42-23)43-28)8-9-22(36)25-27(37)26(19(4)29(38)33-7)34(30(25)39)24-11-10-21(35)20(5)41-24/h8-9,12-14,17-21,23-24,26,28,35-36H,10-11,15H2,1-7H3,(H,33,38)/b9-8-,16-14+,25-22+
Canonical SMILES:  CN=C(C(C1C(=O)/C(=C(/C=CC(=CC(C2OC3(C)OC(C2C)C=CC23OC2)C)C)O)/C(=O)N1C1CCC(C(O1)C)O)C)O
First Find Year:  
Max Developmental Stage:  
Synthetic Gene Cluster:   ;

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO22810 Streptomyces Species Streptomycetaceae Bacteria StreptomeDB*
NPO15003 Streptomyces lydicus Species Streptomycetaceae Bacteria StreptomeDB*
NPO15003.9 Streptomyces lydicus nrrl 2433 Subspecies Streptomycetaceae Bacteria StreptomeDB*

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT368 Cell Line SN12C Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT367 Cell Line MDA-N Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT369 Cell Line ACHN Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT371 Cell Line UO-31 Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT374 Cell Line SF-539 Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT90 Cell Line DU-145 Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT375 Cell Line Malme-3M Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT373 Cell Line SK-MEL-5 Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT111 Cell Line K562 Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT376 Cell Line A498 Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT377 Cell Line OVCAR-3 Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT112 Cell Line MOLT-4 Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT379 Cell Line HOP-62 Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT378 Cell Line NCI/ADR-RES Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT380 Cell Line U-251 Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT381 Cell Line OVCAR-8 Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT382 Cell Line OVCAR-5 Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT82 Cell Line MDA-MB-231 Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT383 Cell Line SNB-19 Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT384 Cell Line TK-10 Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT385 Cell Line SR Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT323 Cell Line SW-620 Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT386 Cell Line KM12 Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT387 Cell Line M14 Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT389 Cell Line RPMI-8226 Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT388 Cell Line NCI-H322M Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT457 Cell Line BT-549 Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT147 Cell Line SK-MEL-2 Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT81 Cell Line A549 Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT391 Cell Line HCC 2998 Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT392 Cell Line SNB-75 Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT148 Cell Line HCT-15 Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT393 Cell Line HCT-116 Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT395 Cell Line SF-268 Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT394 Cell Line EKVX Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT306 Cell Line PC-3 Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT83 Cell Line MCF7 Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT146 Cell Line SK-OV-3 Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT396 Cell Line T47D Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT397 Cell Line NCI-H460 Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT308 Cell Line CAKI-1 Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT398 Cell Line UACC-62 Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT400 Cell Line MDA-MB-435 Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT458 Cell Line IGROV-1 Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT401 Cell Line 786-0 Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT403 Cell Line UACC-257 Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT404 Cell Line CCRF-CEM Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT139 Cell Line HT-29 Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT170 Cell Line SK-MEL-28 Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT406 Cell Line RXF 393 Homo sapiens GI50 100000 nM PubChem BioAssay data set
NPT407 Cell Line COLO 205 Homo sapiens GI50 100000 nM PubChem BioAssay data set

  Similar Natural Products in NPASS

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC315210 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
1.0 High Similarity NPC315848
0.8042 Intermediate Similarity NPC304299
0.8042 Intermediate Similarity NPC475278
0.8042 Intermediate Similarity NPC309450
0.8042 Intermediate Similarity NPC247776
0.8042 Intermediate Similarity NPC475266
0.7926 Intermediate Similarity NPC36254
0.7793 Intermediate Similarity NPC71866
0.6806 Remote Similarity NPC469494
0.6763 Remote Similarity NPC103391
0.6763 Remote Similarity NPC472536
0.6713 Remote Similarity NPC315188
0.6667 Remote Similarity NPC29501
0.6643 Remote Similarity NPC477140
0.6643 Remote Similarity NPC477143
0.6619 Remote Similarity NPC478024
0.6597 Remote Similarity NPC469515
0.6522 Remote Similarity NPC24389
0.649 Remote Similarity NPC314361
0.6486 Remote Similarity NPC473249
0.6481 Remote Similarity NPC314050
0.6481 Remote Similarity NPC315809
0.6443 Remote Similarity NPC477793
0.6443 Remote Similarity NPC329919
0.6429 Remote Similarity NPC170375
0.6424 Remote Similarity NPC120335
0.6419 Remote Similarity NPC313173
0.6405 Remote Similarity NPC99864
0.6403 Remote Similarity NPC298484
0.6392 Remote Similarity NPC142761
0.6383 Remote Similarity NPC469865
0.637 Remote Similarity NPC175531
0.6357 Remote Similarity NPC251122
0.634 Remote Similarity NPC120420
0.6331 Remote Similarity NPC474099
0.6327 Remote Similarity NPC273185
0.6316 Remote Similarity NPC316401
0.6304 Remote Similarity NPC154601
0.6303 Remote Similarity NPC475342
0.6301 Remote Similarity NPC473808
0.6299 Remote Similarity NPC471256
0.6287 Remote Similarity NPC322372
0.6287 Remote Similarity NPC327517
0.6287 Remote Similarity NPC319334
0.6287 Remote Similarity NPC317377
0.6287 Remote Similarity NPC321485
0.6284 Remote Similarity NPC66855
0.6277 Remote Similarity NPC474827
0.6277 Remote Similarity NPC68001
0.6277 Remote Similarity NPC199831
0.6277 Remote Similarity NPC474828
0.6269 Remote Similarity NPC167380
0.625 Remote Similarity NPC313234
0.6218 Remote Similarity NPC230889
0.6214 Remote Similarity NPC475150
0.6214 Remote Similarity NPC207820
0.6204 Remote Similarity NPC474244
0.6197 Remote Similarity NPC476875
0.6194 Remote Similarity NPC121857
0.6184 Remote Similarity NPC316205
0.6184 Remote Similarity NPC315387
0.6174 Remote Similarity NPC316133
0.6174 Remote Similarity NPC314629
0.6174 Remote Similarity NPC318445
0.6173 Remote Similarity NPC61717
0.6173 Remote Similarity NPC244380
0.617 Remote Similarity NPC473578
0.6159 Remote Similarity NPC476877
0.6159 Remote Similarity NPC314282
0.6154 Remote Similarity NPC314550
0.6149 Remote Similarity NPC156379
0.6149 Remote Similarity NPC315915
0.6149 Remote Similarity NPC475383
0.6148 Remote Similarity NPC52820
0.6144 Remote Similarity NPC477988
0.6143 Remote Similarity NPC251330
0.6135 Remote Similarity NPC135121
0.6135 Remote Similarity NPC130714
0.6133 Remote Similarity NPC314451
0.6133 Remote Similarity NPC314512
0.6133 Remote Similarity NPC313333
0.6133 Remote Similarity NPC313342
0.6127 Remote Similarity NPC469603
0.6125 Remote Similarity NPC470886
0.6115 Remote Similarity NPC133420
0.6111 Remote Similarity NPC477217
0.6111 Remote Similarity NPC201244
0.6099 Remote Similarity NPC470072
0.6096 Remote Similarity NPC27413
0.6096 Remote Similarity NPC59751
0.6096 Remote Similarity NPC271621
0.6093 Remote Similarity NPC309525
0.6093 Remote Similarity NPC471263
0.6071 Remote Similarity NPC477398
0.6071 Remote Similarity NPC476876
0.6071 Remote Similarity NPC271269
0.6071 Remote Similarity NPC201128
0.6067 Remote Similarity NPC315783
0.6054 Remote Similarity NPC235625
0.6053 Remote Similarity NPC247902
0.6053 Remote Similarity NPC262880
0.6049 Remote Similarity NPC214821
0.6049 Remote Similarity NPC298067
0.6048 Remote Similarity NPC100612
0.6048 Remote Similarity NPC113620
0.6048 Remote Similarity NPC174336
0.6048 Remote Similarity NPC187497
0.6048 Remote Similarity NPC475599
0.604 Remote Similarity NPC160688
0.6029 Remote Similarity NPC265662
0.6027 Remote Similarity NPC7905
0.6027 Remote Similarity NPC172197
0.6027 Remote Similarity NPC315652
0.6027 Remote Similarity NPC274293
0.6026 Remote Similarity NPC470653
0.6026 Remote Similarity NPC470654
0.6026 Remote Similarity NPC78189
0.6026 Remote Similarity NPC470650
0.6014 Remote Similarity NPC470788
0.6014 Remote Similarity NPC241050
0.6014 Remote Similarity NPC188785
0.6 Remote Similarity NPC64168
0.6 Remote Similarity NPC469739
0.6 Remote Similarity NPC36463
0.6 Remote Similarity NPC477220
0.6 Remote Similarity NPC469604
0.6 Remote Similarity NPC298005
0.5988 Remote Similarity NPC162104
0.5988 Remote Similarity NPC265699
0.5988 Remote Similarity NPC475527
0.5987 Remote Similarity NPC315058
0.5986 Remote Similarity NPC475642
0.5986 Remote Similarity NPC6531
0.5986 Remote Similarity NPC316325
0.5976 Remote Similarity NPC201899
0.5976 Remote Similarity NPC471674
0.5974 Remote Similarity NPC313962
0.5972 Remote Similarity NPC58281
0.5971 Remote Similarity NPC475149
0.5971 Remote Similarity NPC471097
0.597 Remote Similarity NPC320552
0.596 Remote Similarity NPC471255
0.596 Remote Similarity NPC16709
0.5959 Remote Similarity NPC272166
0.5957 Remote Similarity NPC475918
0.5956 Remote Similarity NPC475503
0.5949 Remote Similarity NPC472430
0.5946 Remote Similarity NPC296361
0.5946 Remote Similarity NPC201889
0.5946 Remote Similarity NPC106791
0.5935 Remote Similarity NPC41162
0.5929 Remote Similarity NPC173690
0.5929 Remote Similarity NPC80439
0.5929 Remote Similarity NPC279833
0.5929 Remote Similarity NPC6271
0.5924 Remote Similarity NPC291759
0.5918 Remote Similarity NPC296043
0.5918 Remote Similarity NPC30196
0.5915 Remote Similarity NPC271562
0.5915 Remote Similarity NPC477519
0.5912 Remote Similarity NPC476344
0.5912 Remote Similarity NPC473683
0.5912 Remote Similarity NPC475646
0.5909 Remote Similarity NPC158672
0.5909 Remote Similarity NPC1702
0.5906 Remote Similarity NPC297145
0.5906 Remote Similarity NPC197743
0.5897 Remote Similarity NPC139585
0.5897 Remote Similarity NPC261730
0.5894 Remote Similarity NPC471262
0.589 Remote Similarity NPC141669
0.589 Remote Similarity NPC197682
0.589 Remote Similarity NPC298469
0.589 Remote Similarity NPC130124
0.589 Remote Similarity NPC5485
0.589 Remote Similarity NPC193471
0.589 Remote Similarity NPC193579
0.5887 Remote Similarity NPC470073
0.5887 Remote Similarity NPC205176
0.5886 Remote Similarity NPC472428
0.5882 Remote Similarity NPC189764
0.5882 Remote Similarity NPC329401
0.5882 Remote Similarity NPC477987
0.5882 Remote Similarity NPC150041
0.5878 Remote Similarity NPC329216
0.5876 Remote Similarity NPC40234
0.5874 Remote Similarity NPC171734
0.587 Remote Similarity NPC133591
0.5867 Remote Similarity NPC11379
0.5867 Remote Similarity NPC470652
0.5866 Remote Similarity NPC26108
0.5862 Remote Similarity NPC30911
0.5862 Remote Similarity NPC168758
0.5862 Remote Similarity NPC181510
0.5862 Remote Similarity NPC316984
0.5862 Remote Similarity NPC47857
0.5858 Remote Similarity NPC473341
0.5849 Remote Similarity NPC477400
0.5849 Remote Similarity NPC82129
0.5848 Remote Similarity NPC316244

  Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC315210 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.6644 Remote Similarity NPD8273 Phase 1
0.6552 Remote Similarity NPD7624 Clinical (unspecified phase)
0.6552 Remote Similarity NPD7623 Phase 3
0.6486 Remote Similarity NPD7746 Phase 1
0.6486 Remote Similarity NPD7747 Phase 1
0.6429 Remote Similarity NPD7601 Clinical (unspecified phase)
0.6405 Remote Similarity NPD8415 Approved
0.637 Remote Similarity NPD7739 Clinical (unspecified phase)
0.6364 Remote Similarity NPD8387 Clinical (unspecified phase)
0.6358 Remote Similarity NPD8390 Approved
0.6358 Remote Similarity NPD8392 Approved
0.6358 Remote Similarity NPD8391 Approved
0.6301 Remote Similarity NPD7299 Clinical (unspecified phase)
0.62 Remote Similarity NPD8451 Approved
0.6197 Remote Similarity NPD7116 Clinical (unspecified phase)
0.6174 Remote Similarity NPD7642 Approved
0.6159 Remote Similarity NPD8448 Approved
0.6159 Remote Similarity NPD8074 Phase 3
0.6133 Remote Similarity NPD8342 Approved
0.6133 Remote Similarity NPD8340 Approved
0.6133 Remote Similarity NPD8341 Approved
0.6133 Remote Similarity NPD8299 Approved
0.6067 Remote Similarity NPD7830 Approved
0.6067 Remote Similarity NPD7829 Approved
0.6054 Remote Similarity NPD7641 Discontinued
0.5986 Remote Similarity NPD7500 Approved
0.5976 Remote Similarity NPD8414 Discontinued
0.5963 Remote Similarity NPD8384 Approved
0.5959 Remote Similarity NPD1000 Clinical (unspecified phase)
0.5941 Remote Similarity NPD8417 Discontinued
0.5903 Remote Similarity NPD6421 Discontinued
0.5893 Remote Similarity NPD7613 Discontinued
0.5862 Remote Similarity NPD2204 Approved
0.5789 Remote Similarity NPD8080 Discontinued
0.5772 Remote Similarity NPD8137 Clinical (unspecified phase)
0.5758 Remote Similarity NPD6681 Discovery
0.5755 Remote Similarity NPD8029 Clinical (unspecified phase)
0.5753 Remote Similarity NPD8413 Clinical (unspecified phase)
0.5741 Remote Similarity NPD8172 Phase 2
0.5741 Remote Similarity NPD8173 Phase 2
0.5724 Remote Similarity NPD8274 Clinical (unspecified phase)
0.5724 Remote Similarity NPD8444 Approved
0.5723 Remote Similarity NPD6860 Clinical (unspecified phase)
0.5704 Remote Similarity NPD1407 Approved
0.5695 Remote Similarity NPD2132 Phase 3
0.5686 Remote Similarity NPD6436 Phase 3
0.5671 Remote Similarity NPD6077 Discontinued
0.5667 Remote Similarity NPD7505 Discontinued
0.5655 Remote Similarity NPD8323 Discontinued
0.5621 Remote Similarity NPD8513 Phase 3
0.5617 Remote Similarity NPD8416 Discontinued

Structure

External Identifiers

PubChem CID   54690173
ChEMBL   CHEMBL1993218
ZINC  

Physicochemical Properties

Molecular Weight:  600.30
ALogP:  -1.1236
MLogP:  3.77
XLogP:  2.925
# Rotatable Bonds:  17
Polar Surface Area:  150.65
# H-Bond Aceptor:  11
# H-Bond Donor:  3
# Rings:  5
# Heavy Atoms:  43

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Biological Activities  
Similar NPs/Drugs