Natural Product: NPC262796

Natural Product ID:  NPC262796
Common Name:   Symplocososide L
IUPAC Name:   (2S,3S,4S,5R,6R)-6-[[(3S,4aR,6aR,6bS,7R,8S,8aR,9R,10R,12aS,14aR,14bR)-10-[(2Z)-3,7-dimethylocta-2,6-dienoyl]oxy-7,8-dihydroxy-8a-(hydroxymethyl)-4,4,6a,6b,11,11,14b-heptamethyl-9-(2-methylpropanoyloxy)-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-4-acetyloxy-3-[(2S,3R,4R,5S)-3,4-dihydroxy-5-(hydroxymethyl)oxolan-2-yl]oxy-5-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxane-2-carboxylic acid
Synonyms:   symplocososide L
Molecular Formula:   C63H98O24
Standard InCHIKey:  XPBNJNXKQVWGAY-XWVGWLPGSA-N
Standard InCHI:  InChI=1S/C63H98O24/c1-28(2)15-14-16-30(5)23-39(68)83-51-52(87-54(78)29(3)4)63(27-66)33(24-58(51,7)8)32-17-18-37-60(11)21-20-38(59(9,10)36(60)19-22-61(37,12)62(32,13)49(74)50(63)75)82-57-48(86-56-44(73)42(71)40(69)34(25-64)80-56)46(79-31(6)67)45(47(85-57)53(76)77)84-55-43(72)41(70)35(26-65)81-55/h15,17,23,29,33-38,40-52,55-57,64-66,69-75H,14,16,18-22,24-27H2,1-13H3,(H,76,77)/b30-23-/t33-,34+,35-,36-,37+,38-,40+,41-,42-,43+,44+,45-,46-,47-,48+,49-,50+,51-,52-,55-,56-,57+,60-,61+,62-,63-/m0/s1
Canonical SMILES:  OC[C@H]1O[C@@H](O[C@H]2[C@@H](O[C@@H]([C@H]([C@@H]2OC(=O)C)O[C@@H]2O[C@H]([C@@H]([C@H]2O)O)CO)C(=O)O)O[C@H]2CC[C@]3([C@H](C2(C)C)CC[C@@]2([C@@H]3CC=C3[C@@]2(C)[C@@H](O)[C@H]([C@@]2([C@H]3CC(C)(C)[C@H]([C@@H]2OC(=O)C(C)C)OC(=O)/C=C(CCC=C(C)C)/C)CO)O)C)C)[C@@H]([C@H]([C@@H]1O)O)O
First Find Year:  
Max Developmental Stage:  
Synthetic Gene Cluster:   ;

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO8121 Symplocos chinensis Species Symplocaceae Eukaryota roots Nanning City, Guangxi Province, People's Republic of China 1997-JAN PMID[17190442]

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT179 Cell Line A2780 Homo sapiens IC50 = 2400 nM 22440015
NPT81 Cell Line A549 Homo sapiens IC50 > 10000 nM 21868221
NPT180 Cell Line HCT-8 Homo sapiens IC50 = 1700 nM PubChem BioAssay data set
NPT181 Cell Line Bel-7402 Homo sapiens IC50 = 2700 nM PubChem BioAssay data set
NPT547 Cell Line BGC-823 Homo sapiens IC50 > 10000 nM PubChem BioAssay data set

  Similar Natural Products in NPASS

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC262796 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
1.0 High Similarity NPC476074
1.0 High Similarity NPC134914
1.0 High Similarity NPC264566
1.0 High Similarity NPC172374
1.0 High Similarity NPC45346
1.0 High Similarity NPC475377
1.0 High Similarity NPC329993
1.0 High Similarity NPC478065
1.0 High Similarity NPC475167
1.0 High Similarity NPC173435
1.0 High Similarity NPC301639
1.0 High Similarity NPC478064
0.9917 High Similarity NPC478152
0.9917 High Similarity NPC478153
0.9917 High Similarity NPC478150
0.9835 High Similarity NPC478151
0.9833 High Similarity NPC25998
0.9833 High Similarity NPC478155
0.9832 High Similarity NPC475281
0.9832 High Similarity NPC329923
0.9832 High Similarity NPC477078
0.9832 High Similarity NPC477075
0.9752 High Similarity NPC478154
0.975 High Similarity NPC470913
0.975 High Similarity NPC477077
0.975 High Similarity NPC470912
0.975 High Similarity NPC477079
0.975 High Similarity NPC477076
0.9669 High Similarity NPC477197
0.9667 High Similarity NPC477193
0.9667 High Similarity NPC477194
0.9667 High Similarity NPC477192
0.9667 High Similarity NPC477191
0.959 High Similarity NPC46823
0.959 High Similarity NPC178264
0.959 High Similarity NPC277212
0.959 High Similarity NPC30279
0.959 High Similarity NPC192765
0.959 High Similarity NPC473918
0.959 High Similarity NPC71391
0.9587 High Similarity NPC107536
0.9587 High Similarity NPC115656
0.9587 High Similarity NPC97918
0.9587 High Similarity NPC141600
0.9587 High Similarity NPC11577
0.9587 High Similarity NPC305793
0.9587 High Similarity NPC269484
0.9587 High Similarity NPC280029
0.9587 High Similarity NPC252289
0.9587 High Similarity NPC244296
0.9587 High Similarity NPC477196
0.9587 High Similarity NPC472267
0.9587 High Similarity NPC1314
0.9587 High Similarity NPC82380
0.9587 High Similarity NPC252657
0.9587 High Similarity NPC273878
0.9587 High Similarity NPC88311
0.9587 High Similarity NPC470518
0.9587 High Similarity NPC9470
0.9512 High Similarity NPC225791
0.9508 High Similarity NPC476780
0.9508 High Similarity NPC476774
0.9508 High Similarity NPC476775
0.9508 High Similarity NPC271610
0.9496 High Similarity NPC478066
0.9431 High Similarity NPC312650
0.9431 High Similarity NPC476776
0.9431 High Similarity NPC477195
0.9426 High Similarity NPC47995
0.9426 High Similarity NPC265841
0.9339 High Similarity NPC285091
0.928 High Similarity NPC476778
0.928 High Similarity NPC476777
0.9256 High Similarity NPC470477
0.925 High Similarity NPC235438
0.925 High Similarity NPC107966
0.925 High Similarity NPC249848
0.925 High Similarity NPC40775
0.9213 High Similarity NPC596
0.9206 High Similarity NPC110700
0.9206 High Similarity NPC262813
0.9206 High Similarity NPC279915
0.92 High Similarity NPC476779
0.9187 High Similarity NPC470475
0.9174 High Similarity NPC30735
0.9174 High Similarity NPC202666
0.9174 High Similarity NPC471961
0.9174 High Similarity NPC14617
0.9174 High Similarity NPC471964
0.9174 High Similarity NPC235405
0.9174 High Similarity NPC281148
0.9174 High Similarity NPC262199
0.9134 High Similarity NPC141215
0.9134 High Similarity NPC251998
0.9134 High Similarity NPC190065
0.9134 High Similarity NPC471089
0.9106 High Similarity NPC470780
0.9098 High Similarity NPC471962
0.9098 High Similarity NPC471963
0.9098 High Similarity NPC247315
0.9098 High Similarity NPC23275
0.9091 High Similarity NPC213952
0.9091 High Similarity NPC471965
0.9083 High Similarity NPC236657
0.9083 High Similarity NPC118440
0.9062 High Similarity NPC140045
0.9062 High Similarity NPC295885
0.9032 High Similarity NPC470476
0.9024 High Similarity NPC470218
0.9016 High Similarity NPC257211
0.9008 High Similarity NPC302887
0.9008 High Similarity NPC301449
0.9008 High Similarity NPC86222
0.9008 High Similarity NPC222580
0.9008 High Similarity NPC114484
0.9008 High Similarity NPC171544
0.9008 High Similarity NPC223301
0.9008 High Similarity NPC62725
0.9008 High Similarity NPC104372
0.9008 High Similarity NPC187618
0.9008 High Similarity NPC22956
0.9008 High Similarity NPC159309
0.9008 High Similarity NPC297263
0.9008 High Similarity NPC31838
0.9008 High Similarity NPC64715
0.9008 High Similarity NPC11242
0.9008 High Similarity NPC75417
0.9 High Similarity NPC214484
0.9 High Similarity NPC6377
0.9 High Similarity NPC309780
0.9 High Similarity NPC180550
0.9 High Similarity NPC39211
0.9 High Similarity NPC208381
0.9 High Similarity NPC472949
0.9 High Similarity NPC114441
0.9 High Similarity NPC11551
0.9 High Similarity NPC473884
0.9 High Similarity NPC470914
0.9 High Similarity NPC475171
0.9 High Similarity NPC35405
0.9 High Similarity NPC157868
0.9 High Similarity NPC469945
0.8992 High Similarity NPC224121
0.8952 High Similarity NPC470516
0.8943 High Similarity NPC33068
0.8934 High Similarity NPC131469
0.8934 High Similarity NPC313110
0.8934 High Similarity NPC4749
0.8934 High Similarity NPC475591
0.8934 High Similarity NPC162574
0.8934 High Similarity NPC236870
0.8934 High Similarity NPC10607
0.8934 High Similarity NPC21691
0.8934 High Similarity NPC80986
0.8934 High Similarity NPC187290
0.8917 High Similarity NPC286347
0.8889 High Similarity NPC311178
0.8889 High Similarity NPC43589
0.8889 High Similarity NPC300655
0.8889 High Similarity NPC222951
0.8871 High Similarity NPC469947
0.8871 High Similarity NPC181066
0.8871 High Similarity NPC284449
0.8862 High Similarity NPC2370
0.8862 High Similarity NPC44716
0.8862 High Similarity NPC283417
0.8862 High Similarity NPC302543
0.8862 High Similarity NPC200049
0.8862 High Similarity NPC258617
0.8852 High Similarity NPC31193
0.8852 High Similarity NPC242840
0.8843 High Similarity NPC192791
0.8843 High Similarity NPC122971
0.8833 High Similarity NPC473405
0.8819 High Similarity NPC475444
0.8819 High Similarity NPC196874
0.8819 High Similarity NPC473679
0.8819 High Similarity NPC319719
0.8819 High Similarity NPC475177
0.8819 High Similarity NPC233223
0.8819 High Similarity NPC183816
0.8819 High Similarity NPC322904
0.8819 High Similarity NPC324933
0.879 High Similarity NPC470922
0.879 High Similarity NPC160452
0.877 High Similarity NPC473645
0.877 High Similarity NPC294112
0.877 High Similarity NPC107338
0.877 High Similarity NPC109607
0.876 High Similarity NPC471548
0.876 High Similarity NPC105800
0.876 High Similarity NPC232237
0.873 High Similarity NPC220838
0.873 High Similarity NPC45606
0.872 High Similarity NPC475368
0.871 High Similarity NPC67251
0.8699 High Similarity NPC476204
0.8699 High Similarity NPC170084
0.8689 High Similarity NPC475775
0.8689 High Similarity NPC207738

  Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC262796 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.9174 High Similarity NPD8328 Phase 3
0.8833 High Similarity NPD8295 Clinical (unspecified phase)
0.811 Intermediate Similarity NPD8517 Approved
0.811 Intermediate Similarity NPD8513 Phase 3
0.811 Intermediate Similarity NPD8515 Approved
0.811 Intermediate Similarity NPD8516 Approved
0.8092 Intermediate Similarity NPD7319 Approved
0.8015 Intermediate Similarity NPD7736 Approved
0.8 Intermediate Similarity NPD7507 Approved
0.7969 Intermediate Similarity NPD8033 Approved
0.7891 Intermediate Similarity NPD8377 Approved
0.7891 Intermediate Similarity NPD8294 Approved
0.7869 Intermediate Similarity NPD6686 Approved
0.784 Intermediate Similarity NPD8133 Approved
0.7829 Intermediate Similarity NPD8296 Approved
0.7829 Intermediate Similarity NPD8335 Approved
0.7829 Intermediate Similarity NPD8378 Approved
0.7829 Intermediate Similarity NPD8380 Approved
0.7829 Intermediate Similarity NPD8379 Approved
0.7805 Intermediate Similarity NPD8132 Clinical (unspecified phase)
0.7803 Intermediate Similarity NPD8293 Discontinued
0.7674 Intermediate Similarity NPD7516 Approved
0.7634 Intermediate Similarity NPD6370 Approved
0.7597 Intermediate Similarity NPD7327 Approved
0.7597 Intermediate Similarity NPD7328 Approved
0.7519 Intermediate Similarity NPD7492 Approved
0.7481 Intermediate Similarity NPD6054 Approved
0.7481 Intermediate Similarity NPD6059 Approved
0.7463 Intermediate Similarity NPD6616 Approved
0.744 Intermediate Similarity NPD5345 Clinical (unspecified phase)
0.7424 Intermediate Similarity NPD7503 Approved
0.7407 Intermediate Similarity NPD7078 Approved
0.7402 Intermediate Similarity NPD8413 Clinical (unspecified phase)
0.736 Intermediate Similarity NPD6412 Phase 2
0.7355 Intermediate Similarity NPD4225 Approved
0.7348 Intermediate Similarity NPD6319 Approved
0.7293 Intermediate Similarity NPD6015 Approved
0.7293 Intermediate Similarity NPD6016 Approved
0.7279 Intermediate Similarity NPD8074 Phase 3
0.7252 Intermediate Similarity NPD7115 Discovery
0.7239 Intermediate Similarity NPD5988 Approved
0.7213 Intermediate Similarity NPD7638 Approved
0.7209 Intermediate Similarity NPD6882 Approved
0.7209 Intermediate Similarity NPD8297 Approved
0.7154 Intermediate Similarity NPD7640 Approved
0.7154 Intermediate Similarity NPD7639 Approved
0.7131 Intermediate Similarity NPD7902 Approved
0.7121 Intermediate Similarity NPD6009 Approved
0.7109 Intermediate Similarity NPD6372 Approved
0.7109 Intermediate Similarity NPD6373 Approved
0.7109 Intermediate Similarity NPD4061 Clinical (unspecified phase)
0.7054 Intermediate Similarity NPD5955 Clinical (unspecified phase)
0.7025 Intermediate Similarity NPD7748 Approved
0.7008 Intermediate Similarity NPD5739 Approved
0.7008 Intermediate Similarity NPD6402 Approved
0.7008 Intermediate Similarity NPD6675 Approved
0.7008 Intermediate Similarity NPD7128 Approved
0.7 Intermediate Similarity NPD6650 Approved
0.7 Intermediate Similarity NPD6649 Approved
0.6978 Remote Similarity NPD6033 Approved
0.6912 Remote Similarity NPD6921 Approved
0.6899 Remote Similarity NPD6881 Approved
0.6899 Remote Similarity NPD7320 Approved
0.6899 Remote Similarity NPD6899 Approved
0.6894 Remote Similarity NPD4632 Approved
0.6885 Remote Similarity NPD7901 Clinical (unspecified phase)
0.6885 Remote Similarity NPD7900 Approved
0.687 Remote Similarity NPD8130 Phase 1
0.686 Remote Similarity NPD7515 Phase 2
0.6822 Remote Similarity NPD5701 Approved
0.6822 Remote Similarity NPD5954 Clinical (unspecified phase)
0.6822 Remote Similarity NPD5697 Approved
0.6822 Remote Similarity NPD7899 Clinical (unspecified phase)
0.6797 Remote Similarity NPD8170 Clinical (unspecified phase)
0.6794 Remote Similarity NPD7102 Approved
0.6794 Remote Similarity NPD6883 Approved
0.6794 Remote Similarity NPD7290 Approved
0.6742 Remote Similarity NPD6847 Approved
0.6742 Remote Similarity NPD6617 Approved
0.6742 Remote Similarity NPD6869 Approved
0.6727 Remote Similarity NPD7799 Discontinued
0.6718 Remote Similarity NPD6012 Approved
0.6718 Remote Similarity NPD6014 Approved
0.6718 Remote Similarity NPD6013 Approved
0.6712 Remote Similarity NPD7966 Clinical (unspecified phase)
0.6691 Remote Similarity NPD7604 Phase 2
0.6667 Remote Similarity NPD8029 Clinical (unspecified phase)
0.6667 Remote Similarity NPD4634 Approved
0.6667 Remote Similarity NPD5983 Phase 2
0.6641 Remote Similarity NPD7632 Discontinued
0.6641 Remote Similarity NPD6011 Approved
0.6639 Remote Similarity NPD46 Approved
0.6639 Remote Similarity NPD6698 Approved
0.6617 Remote Similarity NPD6401 Clinical (unspecified phase)
0.6615 Remote Similarity NPD6008 Approved
0.6597 Remote Similarity NPD7260 Phase 2
0.6596 Remote Similarity NPD6336 Discontinued
0.6571 Remote Similarity NPD7830 Approved
0.6571 Remote Similarity NPD7829 Approved
0.6571 Remote Similarity NPD6067 Discontinued
0.6549 Remote Similarity NPD8448 Approved
0.6536 Remote Similarity NPD7625 Phase 1
0.6531 Remote Similarity NPD8387 Clinical (unspecified phase)
0.65 Remote Similarity NPD8080 Discontinued
0.6479 Remote Similarity NPD8451 Approved
0.6463 Remote Similarity NPD8415 Approved
0.6457 Remote Similarity NPD6083 Phase 2
0.6457 Remote Similarity NPD6084 Phase 2
0.6457 Remote Similarity NPD4755 Approved
0.6453 Remote Similarity NPD8407 Phase 2
0.6452 Remote Similarity NPD8035 Phase 2
0.6452 Remote Similarity NPD8034 Phase 2
0.6452 Remote Similarity NPD6411 Approved
0.6452 Remote Similarity NPD7983 Approved
0.6444 Remote Similarity NPD6053 Discontinued
0.6438 Remote Similarity NPD6845 Suspended
0.6434 Remote Similarity NPD5344 Discontinued
0.6423 Remote Similarity NPD6274 Approved
0.6418 Remote Similarity NPD6371 Approved
0.6414 Remote Similarity NPD8391 Approved
0.6414 Remote Similarity NPD8390 Approved
0.6414 Remote Similarity NPD8392 Approved
0.6403 Remote Similarity NPD7101 Approved
0.6403 Remote Similarity NPD7100 Approved
0.64 Remote Similarity NPD6399 Phase 3
0.64 Remote Similarity NPD5778 Approved
0.64 Remote Similarity NPD5779 Approved
0.6385 Remote Similarity NPD5211 Phase 2
0.6378 Remote Similarity NPD4697 Phase 3
0.6374 Remote Similarity NPD8368 Discontinued
0.6357 Remote Similarity NPD5286 Approved
0.6357 Remote Similarity NPD5285 Approved
0.6357 Remote Similarity NPD4700 Approved
0.6357 Remote Similarity NPD4696 Approved
0.6331 Remote Similarity NPD6335 Approved
0.6312 Remote Similarity NPD8444 Approved
0.6312 Remote Similarity NPD8274 Clinical (unspecified phase)
0.6312 Remote Similarity NPD6909 Approved
0.6312 Remote Similarity NPD6908 Approved
0.6304 Remote Similarity NPD6868 Approved
0.6301 Remote Similarity NPD5956 Approved
0.6299 Remote Similarity NPD1698 Clinical (unspecified phase)
0.6294 Remote Similarity NPD8342 Approved
0.6294 Remote Similarity NPD8340 Approved
0.6294 Remote Similarity NPD8299 Approved
0.6294 Remote Similarity NPD8341 Approved
0.629 Remote Similarity NPD5328 Approved
0.629 Remote Similarity NPD6101 Approved
0.629 Remote Similarity NPD5764 Clinical (unspecified phase)
0.6288 Remote Similarity NPD5141 Approved
0.6279 Remote Similarity NPD5696 Approved
0.627 Remote Similarity NPD8171 Discontinued
0.626 Remote Similarity NPD5225 Approved
0.626 Remote Similarity NPD5224 Approved
0.626 Remote Similarity NPD4633 Approved
0.626 Remote Similarity NPD5226 Approved
0.6259 Remote Similarity NPD6317 Approved
0.625 Remote Similarity NPD5221 Approved
0.625 Remote Similarity NPD5220 Clinical (unspecified phase)
0.625 Remote Similarity NPD5222 Approved
0.6241 Remote Similarity NPD4767 Approved
0.6241 Remote Similarity NPD4768 Approved
0.624 Remote Similarity NPD7838 Discovery
0.6224 Remote Similarity NPD7642 Approved
0.622 Remote Similarity NPD5282 Discontinued
0.6214 Remote Similarity NPD6314 Approved
0.6214 Remote Similarity NPD6313 Approved
0.6212 Remote Similarity NPD5175 Approved
0.6212 Remote Similarity NPD5174 Approved
0.621 Remote Similarity NPD5737 Approved
0.621 Remote Similarity NPD6672 Approved
0.6202 Remote Similarity NPD5173 Approved
0.6199 Remote Similarity NPD8470 Clinical (unspecified phase)
0.6197 Remote Similarity NPD6291 Clinical (unspecified phase)
0.619 Remote Similarity NPD6079 Approved
0.6183 Remote Similarity NPD5223 Approved
0.6179 Remote Similarity NPD3618 Phase 1
0.6174 Remote Similarity NPD8450 Suspended
0.6172 Remote Similarity NPD5695 Phase 3
0.6164 Remote Similarity NPD8336 Approved
0.6164 Remote Similarity NPD8337 Approved
0.616 Remote Similarity NPD7285 Clinical (unspecified phase)
0.6148 Remote Similarity NPD6400 Clinical (unspecified phase)
0.6148 Remote Similarity NPD4730 Approved
0.6148 Remote Similarity NPD4729 Approved
0.6145 Remote Similarity NPD7879 Clinical (unspecified phase)
0.6143 Remote Similarity NPD8137 Clinical (unspecified phase)
0.6134 Remote Similarity NPD7645 Phase 2
0.6129 Remote Similarity NPD3573 Approved
0.6124 Remote Similarity NPD8435 Approved
0.6124 Remote Similarity NPD7839 Suspended
0.6107 Remote Similarity NPD6648 Approved
0.6107 Remote Similarity NPD8449 Approved
0.6107 Remote Similarity NPD8338 Approved
0.6098 Remote Similarity NPD7520 Clinical (unspecified phase)
0.6098 Remote Similarity NPD1694 Approved
0.609 Remote Similarity NPD4754 Approved
0.6087 Remote Similarity NPD8486 Clinical (unspecified phase)
0.6081 Remote Similarity NPD6914 Discontinued
0.608 Remote Similarity NPD7513 Clinical (unspecified phase)

Structure

External Identifiers

PubChem CID   16099389
ChEMBL   CHEMBL498883
ZINC  

Physicochemical Properties

Molecular Weight:  1238.64
ALogP:  -0.4658
MLogP:  5.75
XLogP:  5.242
# Rotatable Bonds:  45
Polar Surface Area:  373.88
# H-Bond Aceptor:  24
# H-Bond Donor:  11
# Rings:  8
# Heavy Atoms:  87

Download Data

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Structure MOL file  
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Biological Activities  
Similar NPs/Drugs