Natural Product: NPC219584

Natural Product ID:  NPC219584
Common Name:   Mammea C/Bb
IUPAC Name:   5,7-dihydroxy-8-[(2S)-2-methylbutanoyl]-6-(3-methylbut-2-enyl)-4-pentylchromen-2-one
Synonyms:  
Molecular Formula:   C24H32O5
Standard InCHIKey:  HHPBGHOULCFTMR-HNNXBMFYSA-N
Standard InCHI:  InChI=1S/C24H32O5/c1-6-8-9-10-16-13-18(25)29-24-19(16)22(27)17(12-11-14(3)4)23(28)20(24)21(26)15(5)7-2/h11,13,15,27-28H,6-10,12H2,1-5H3/t15-/m0/s1
Canonical SMILES:  CCCCCc1cc(=O)oc2c1c(O)c(CC=C(C)C)c(c2C(=O)[C@H](CC)C)O
First Find Year:  
Max Developmental Stage:  
Synthetic Gene Cluster:   ;

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO21645 Mammea americana Species Calophyllaceae Eukaryota PMID[21214226]
NPO21645 Mammea americana Species Calophyllaceae Eukaryota Stems PMID[21214226]

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT2 Others Unspecified IC50 = 3730 nM 21214226
NPT2 Others Unspecified IC50 = 3400 nM 21214226
NPT396 Cell Line T47D Homo sapiens IC50 = 1560 nM 21214226
NPT306 Cell Line PC-3 Homo sapiens IC50 = 2190 nM 21214226

  Similar Natural Products in NPASS

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC219584 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
1.0 High Similarity NPC470083
0.9925 High Similarity NPC19476
0.9925 High Similarity NPC241975
0.9924 High Similarity NPC138047
0.9924 High Similarity NPC474624
0.9924 High Similarity NPC131782
0.985 High Similarity NPC183639
0.985 High Similarity NPC199458
0.9635 High Similarity NPC470553
0.9635 High Similarity NPC307895
0.9632 High Similarity NPC470555
0.9565 High Similarity NPC469935
0.9565 High Similarity NPC118059
0.9565 High Similarity NPC288910
0.9565 High Similarity NPC470554
0.9565 High Similarity NPC133060
0.9565 High Similarity NPC178627
0.9562 High Similarity NPC470556
0.9562 High Similarity NPC112829
0.9559 High Similarity NPC221173
0.9496 High Similarity NPC181388
0.9496 High Similarity NPC470910
0.9493 High Similarity NPC196459
0.9493 High Similarity NPC33653
0.9493 High Similarity NPC112791
0.9493 High Similarity NPC184738
0.9493 High Similarity NPC94794
0.9493 High Similarity NPC188632
0.9493 High Similarity NPC470296
0.9493 High Similarity NPC87609
0.9493 High Similarity NPC470909
0.9493 High Similarity NPC96216
0.9493 High Similarity NPC474939
0.9485 High Similarity NPC472343
0.947 High Similarity NPC185624
0.9424 High Similarity NPC1886
0.9424 High Similarity NPC196137
0.942 High Similarity NPC294432
0.942 High Similarity NPC36181
0.9362 High Similarity NPC469933
0.9357 High Similarity NPC470322
0.9357 High Similarity NPC154217
0.9333 High Similarity NPC101752
0.9328 High Similarity NPC470984
0.9318 High Similarity NPC21378
0.9318 High Similarity NPC470987
0.9296 High Similarity NPC469932
0.9291 High Similarity NPC297886
0.9291 High Similarity NPC249942
0.9281 High Similarity NPC472344
0.927 High Similarity NPC470668
0.927 High Similarity NPC470669
0.9265 High Similarity NPC470982
0.9265 High Similarity NPC174999
0.9265 High Similarity NPC470983
0.9254 High Similarity NPC470988
0.9225 High Similarity NPC208303
0.9225 High Similarity NPC161864
0.922 High Similarity NPC57470
0.9197 High Similarity NPC332594
0.9185 High Similarity NPC93756
0.9185 High Similarity NPC108113
0.9161 High Similarity NPC19238
0.9155 High Similarity NPC140120
0.9155 High Similarity NPC180477
0.9155 High Similarity NPC474108
0.9155 High Similarity NPC177995
0.9155 High Similarity NPC285748
0.9149 High Similarity NPC71184
0.9149 High Similarity NPC469953
0.9149 High Similarity NPC206212
0.9137 High Similarity NPC16455
0.9137 High Similarity NPC477272
0.9137 High Similarity NPC471587
0.9137 High Similarity NPC307990
0.913 High Similarity NPC474487
0.913 High Similarity NPC470672
0.913 High Similarity NPC131130
0.913 High Similarity NPC474504
0.913 High Similarity NPC470671
0.9124 High Similarity NPC156910
0.9124 High Similarity NPC470985
0.9124 High Similarity NPC470989
0.9124 High Similarity NPC268081
0.9118 High Similarity NPC125920
0.9111 High Similarity NPC10971
0.9097 High Similarity NPC327059
0.9097 High Similarity NPC470908
0.9097 High Similarity NPC474735
0.9097 High Similarity NPC321387
0.9071 High Similarity NPC282300
0.9071 High Similarity NPC316911
0.9071 High Similarity NPC316560
0.9065 High Similarity NPC217186
0.9065 High Similarity NPC55018
0.9065 High Similarity NPC240305
0.9065 High Similarity NPC96565
0.9065 High Similarity NPC216978
0.9065 High Similarity NPC220062
0.9065 High Similarity NPC139554
0.9065 High Similarity NPC473209
0.9065 High Similarity NPC53181
0.9065 High Similarity NPC301217
0.9065 High Similarity NPC303633
0.9065 High Similarity NPC23257
0.9058 High Similarity NPC253616
0.9058 High Similarity NPC38153
0.9051 High Similarity NPC60667
0.9044 High Similarity NPC16197
0.9034 High Similarity NPC290671
0.9028 High Similarity NPC104236
0.9028 High Similarity NPC164205
0.9007 High Similarity NPC321148
0.9007 High Similarity NPC321629
0.9007 High Similarity NPC204469
0.9007 High Similarity NPC323884
0.9007 High Similarity NPC326193
0.9 High Similarity NPC241100
0.9 High Similarity NPC172986
0.9 High Similarity NPC270883
0.9 High Similarity NPC261227
0.9 High Similarity NPC159275
0.8993 High Similarity NPC272844
0.8993 High Similarity NPC254168
0.8993 High Similarity NPC248995
0.8993 High Similarity NPC54820
0.8993 High Similarity NPC201395
0.8993 High Similarity NPC36414
0.8993 High Similarity NPC268178
0.8993 High Similarity NPC180501
0.898 High Similarity NPC469934
0.8978 High Similarity NPC144027
0.8978 High Similarity NPC236974
0.8971 High Similarity NPC215875
0.8971 High Similarity NPC285054
0.8971 High Similarity NPC15834
0.8971 High Similarity NPC25937
0.8966 High Similarity NPC158866
0.8966 High Similarity NPC151973
0.8963 High Similarity NPC5515
0.8963 High Similarity NPC270369
0.8936 High Similarity NPC64908
0.8936 High Similarity NPC156590
0.8936 High Similarity NPC118840
0.8936 High Similarity NPC110969
0.8936 High Similarity NPC147688
0.8936 High Similarity NPC205006
0.8936 High Similarity NPC201820
0.8929 High Similarity NPC78913
0.8929 High Similarity NPC470986
0.8929 High Similarity NPC18260
0.8929 High Similarity NPC472515
0.8921 High Similarity NPC255801
0.8921 High Similarity NPC322301
0.8913 High Similarity NPC151113
0.8904 High Similarity NPC312549
0.8904 High Similarity NPC209142
0.8897 High Similarity NPC31872
0.8897 High Similarity NPC473584
0.8897 High Similarity NPC475589
0.8881 High Similarity NPC473014
0.8881 High Similarity NPC29577
0.8881 High Similarity NPC235217
0.8881 High Similarity NPC326500
0.8873 High Similarity NPC299080
0.8873 High Similarity NPC11561
0.8873 High Similarity NPC266725
0.8873 High Similarity NPC217083
0.8873 High Similarity NPC78803
0.8873 High Similarity NPC276565
0.8873 High Similarity NPC293852
0.8873 High Similarity NPC226636
0.8873 High Similarity NPC59739
0.8873 High Similarity NPC214236
0.8873 High Similarity NPC200694
0.8873 High Similarity NPC62840
0.8873 High Similarity NPC325346
0.8865 High Similarity NPC150522
0.8865 High Similarity NPC69769
0.8865 High Similarity NPC235239
0.8865 High Similarity NPC305355
0.8865 High Similarity NPC475680
0.8849 High Similarity NPC470397
0.8849 High Similarity NPC187826
0.8849 High Similarity NPC470398
0.8849 High Similarity NPC13408
0.8841 High Similarity NPC103842
0.8836 High Similarity NPC180351
0.8832 High Similarity NPC203817
0.8828 High Similarity NPC472345
0.8828 High Similarity NPC37139
0.8828 High Similarity NPC105415
0.8824 High Similarity NPC250057
0.8824 High Similarity NPC279566
0.8824 High Similarity NPC324482
0.8819 High Similarity NPC285630
0.8819 High Similarity NPC476088
0.8819 High Similarity NPC237208
0.8819 High Similarity NPC329678
0.8819 High Similarity NPC153758

  Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC219584 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.8768 High Similarity NPD6651 Approved
0.875 High Similarity NPD4378 Clinical (unspecified phase)
0.875 High Similarity NPD7410 Clinical (unspecified phase)
0.8662 High Similarity NPD2800 Approved
0.8592 High Similarity NPD970 Clinical (unspecified phase)
0.8531 High Similarity NPD1243 Approved
0.8523 High Similarity NPD7411 Suspended
0.8493 Intermediate Similarity NPD2532 Approved
0.8493 Intermediate Similarity NPD2533 Approved
0.8493 Intermediate Similarity NPD2534 Approved
0.8487 Intermediate Similarity NPD7075 Discontinued
0.8411 Intermediate Similarity NPD7096 Clinical (unspecified phase)
0.8411 Intermediate Similarity NPD7819 Suspended
0.8392 Intermediate Similarity NPD1552 Clinical (unspecified phase)
0.8392 Intermediate Similarity NPD1550 Clinical (unspecified phase)
0.8357 Intermediate Similarity NPD1240 Approved
0.8355 Intermediate Similarity NPD8443 Clinical (unspecified phase)
0.8344 Intermediate Similarity NPD6801 Discontinued
0.8333 Intermediate Similarity NPD1549 Phase 2
0.8299 Intermediate Similarity NPD6799 Approved
0.8252 Intermediate Similarity NPD1510 Phase 2
0.8239 Intermediate Similarity NPD1607 Approved
0.8219 Intermediate Similarity NPD3750 Approved
0.8214 Intermediate Similarity NPD6859 Clinical (unspecified phase)
0.8194 Intermediate Similarity NPD2796 Approved
0.8182 Intermediate Similarity NPD7768 Phase 2
0.817 Intermediate Similarity NPD2393 Clinical (unspecified phase)
0.8169 Intermediate Similarity NPD5123 Clinical (unspecified phase)
0.8169 Intermediate Similarity NPD5124 Phase 1
0.8151 Intermediate Similarity NPD7421 Clinical (unspecified phase)
0.8133 Intermediate Similarity NPD920 Approved
0.8125 Intermediate Similarity NPD2799 Discontinued
0.8108 Intermediate Similarity NPD643 Clinical (unspecified phase)
0.8092 Intermediate Similarity NPD6599 Discontinued
0.8092 Intermediate Similarity NPD4380 Phase 2
0.8088 Intermediate Similarity NPD422 Phase 1
0.8054 Intermediate Similarity NPD1511 Approved
0.805 Intermediate Similarity NPD7852 Clinical (unspecified phase)
0.8029 Intermediate Similarity NPD9717 Approved
0.8013 Intermediate Similarity NPD3749 Approved
0.8 Intermediate Similarity NPD642 Clinical (unspecified phase)
0.7986 Intermediate Similarity NPD1203 Approved
0.7973 Intermediate Similarity NPD6398 Clinical (unspecified phase)
0.7973 Intermediate Similarity NPD1878 Clinical (unspecified phase)
0.7958 Intermediate Similarity NPD3268 Approved
0.7958 Intermediate Similarity NPD2313 Discontinued
0.7947 Intermediate Similarity NPD1512 Approved
0.7945 Intermediate Similarity NPD2935 Discontinued
0.7945 Intermediate Similarity NPD1551 Phase 2
0.7935 Intermediate Similarity NPD2801 Approved
0.7901 Intermediate Similarity NPD7804 Clinical (unspecified phase)
0.7901 Intermediate Similarity NPD7286 Phase 2
0.7898 Intermediate Similarity NPD4381 Clinical (unspecified phase)
0.7888 Intermediate Similarity NPD7473 Discontinued
0.7885 Intermediate Similarity NPD3817 Phase 2
0.7877 Intermediate Similarity NPD3748 Approved
0.7871 Intermediate Similarity NPD1934 Approved
0.7857 Intermediate Similarity NPD2797 Approved
0.7817 Intermediate Similarity NPD6832 Phase 2
0.7812 Intermediate Similarity NPD5710 Approved
0.7812 Intermediate Similarity NPD5711 Approved
0.7805 Intermediate Similarity NPD5953 Discontinued
0.7778 Intermediate Similarity NPD5403 Approved
0.775 Intermediate Similarity NPD6959 Discontinued
0.7736 Intermediate Similarity NPD919 Approved
0.7722 Intermediate Similarity NPD3882 Suspended
0.7708 Intermediate Similarity NPD1296 Phase 2
0.7703 Intermediate Similarity NPD6099 Approved
0.7703 Intermediate Similarity NPD6100 Approved
0.7702 Intermediate Similarity NPD6232 Discontinued
0.7677 Intermediate Similarity NPD3226 Approved
0.7647 Intermediate Similarity NPD5401 Approved
0.761 Intermediate Similarity NPD4868 Clinical (unspecified phase)
0.7606 Intermediate Similarity NPD3267 Approved
0.7606 Intermediate Similarity NPD3266 Approved
0.7605 Intermediate Similarity NPD4419 Clinical (unspecified phase)
0.7576 Intermediate Similarity NPD7054 Approved
0.7535 Intermediate Similarity NPD3225 Approved
0.7533 Intermediate Similarity NPD2346 Discontinued
0.7533 Intermediate Similarity NPD2344 Approved
0.753 Intermediate Similarity NPD7472 Approved
0.753 Intermediate Similarity NPD7074 Phase 3
0.7517 Intermediate Similarity NPD7033 Discontinued
0.7517 Intermediate Similarity NPD4308 Phase 3
0.7515 Intermediate Similarity NPD3818 Discontinued
0.75 Intermediate Similarity NPD6167 Clinical (unspecified phase)
0.75 Intermediate Similarity NPD4628 Phase 3
0.75 Intermediate Similarity NPD6166 Phase 2
0.75 Intermediate Similarity NPD6168 Clinical (unspecified phase)
0.747 Intermediate Similarity NPD5844 Phase 1
0.7469 Intermediate Similarity NPD5494 Approved
0.7468 Intermediate Similarity NPD7615 Clinical (unspecified phase)
0.7466 Intermediate Similarity NPD411 Approved
0.744 Intermediate Similarity NPD7251 Discontinued
0.744 Intermediate Similarity NPD6559 Discontinued
0.7438 Intermediate Similarity NPD5402 Approved
0.7434 Intermediate Similarity NPD2654 Approved
0.7432 Intermediate Similarity NPD447 Suspended
0.7431 Intermediate Similarity NPD2798 Approved
0.741 Intermediate Similarity NPD9545 Approved
0.74 Intermediate Similarity NPD1509 Clinical (unspecified phase)
0.7396 Intermediate Similarity NPD7808 Phase 3
0.7396 Intermediate Similarity NPD4338 Clinical (unspecified phase)
0.7394 Intermediate Similarity NPD1608 Approved
0.7391 Intermediate Similarity NPD9493 Approved
0.7386 Intermediate Similarity NPD8090 Clinical (unspecified phase)
0.7381 Intermediate Similarity NPD6797 Phase 2
0.7375 Intermediate Similarity NPD1465 Phase 2
0.7347 Intermediate Similarity NPD4907 Clinical (unspecified phase)
0.7338 Intermediate Similarity NPD2309 Approved
0.7329 Intermediate Similarity NPD1008 Clinical (unspecified phase)
0.7315 Intermediate Similarity NPD230 Phase 1
0.731 Intermediate Similarity NPD1019 Discontinued
0.7248 Intermediate Similarity NPD943 Approved
0.7248 Intermediate Similarity NPD4307 Phase 2
0.7244 Intermediate Similarity NPD7390 Discontinued
0.7233 Intermediate Similarity NPD7458 Discontinued
0.723 Intermediate Similarity NPD1699 Clinical (unspecified phase)
0.7222 Intermediate Similarity NPD4288 Approved
0.7212 Intermediate Similarity NPD1247 Approved
0.7211 Intermediate Similarity NPD4908 Phase 1
0.72 Intermediate Similarity NPD1899 Clinical (unspecified phase)
0.719 Intermediate Similarity NPD6004 Phase 3
0.719 Intermediate Similarity NPD6006 Clinical (unspecified phase)
0.719 Intermediate Similarity NPD6002 Phase 3
0.719 Intermediate Similarity NPD6003 Clinical (unspecified phase)
0.719 Intermediate Similarity NPD2343 Clinical (unspecified phase)
0.719 Intermediate Similarity NPD6005 Phase 3
0.7188 Intermediate Similarity NPD6585 Discontinued
0.7183 Intermediate Similarity NPD17 Approved
0.7176 Intermediate Similarity NPD7993 Clinical (unspecified phase)
0.7175 Intermediate Similarity NPD4363 Phase 3
0.7175 Intermediate Similarity NPD4360 Phase 2
0.7169 Intermediate Similarity NPD7229 Phase 3
0.7163 Intermediate Similarity NPD1548 Phase 1
0.7152 Intermediate Similarity NPD5049 Phase 3
0.7143 Intermediate Similarity NPD4287 Approved
0.7143 Intermediate Similarity NPD5889 Approved
0.7143 Intermediate Similarity NPD5890 Approved
0.7135 Intermediate Similarity NPD4361 Phase 2
0.7135 Intermediate Similarity NPD4362 Clinical (unspecified phase)
0.7124 Intermediate Similarity NPD5405 Approved
0.7124 Intermediate Similarity NPD5406 Approved
0.7124 Intermediate Similarity NPD5404 Approved
0.7124 Intermediate Similarity NPD5408 Approved
0.7123 Intermediate Similarity NPD1164 Approved
0.7118 Intermediate Similarity NPD1729 Discontinued
0.7113 Intermediate Similarity NPD4196 Clinical (unspecified phase)
0.7107 Intermediate Similarity NPD6980 Clinical (unspecified phase)
0.7103 Intermediate Similarity NPD4749 Approved
0.7097 Intermediate Similarity NPD1652 Phase 2
0.7089 Intermediate Similarity NPD7004 Clinical (unspecified phase)
0.7086 Intermediate Similarity NPD6355 Discontinued
0.7086 Intermediate Similarity NPD1933 Approved
0.7083 Intermediate Similarity NPD1547 Clinical (unspecified phase)
0.7083 Intermediate Similarity NPD1610 Phase 2
0.7051 Intermediate Similarity NPD7003 Approved
0.7035 Intermediate Similarity NPD6104 Discontinued
0.7034 Intermediate Similarity NPD1481 Phase 2
0.7024 Intermediate Similarity NPD3926 Phase 2
0.7019 Intermediate Similarity NPD5808 Clinical (unspecified phase)
0.7006 Intermediate Similarity NPD2354 Approved
0.7 Intermediate Similarity NPD7893 Clinical (unspecified phase)
0.7 Intermediate Similarity NPD3764 Approved
0.7 Intermediate Similarity NPD6798 Discontinued
0.7 Intermediate Similarity NPD6410 Clinical (unspecified phase)
0.6982 Remote Similarity NPD2403 Approved
0.6982 Remote Similarity NPD7784 Clinical (unspecified phase)
0.6966 Remote Similarity NPD1535 Discovery
0.6966 Remote Similarity NPD7879 Clinical (unspecified phase)
0.6954 Remote Similarity NPD8312 Approved
0.6954 Remote Similarity NPD8313 Approved
0.6934 Remote Similarity NPD74 Approved
0.6934 Remote Similarity NPD9266 Approved
0.6933 Remote Similarity NPD4625 Phase 3
0.6929 Remote Similarity NPD1241 Discontinued
0.6923 Remote Similarity NPD1894 Discontinued
0.6918 Remote Similarity NPD6143 Clinical (unspecified phase)
0.6918 Remote Similarity NPD3972 Approved
0.6908 Remote Similarity NPD4060 Phase 1
0.6905 Remote Similarity NPD7199 Phase 2
0.6903 Remote Similarity NPD4477 Approved
0.6903 Remote Similarity NPD4476 Approved
0.6867 Remote Similarity NPD2614 Approved
0.6861 Remote Similarity NPD9265 Clinical (unspecified phase)
0.6861 Remote Similarity NPD9267 Approved
0.6861 Remote Similarity NPD9263 Approved
0.6861 Remote Similarity NPD9264 Approved
0.6859 Remote Similarity NPD2353 Approved
0.6859 Remote Similarity NPD2355 Clinical (unspecified phase)
0.6857 Remote Similarity NPD5535 Approved
0.6855 Remote Similarity NPD6666 Approved
0.6855 Remote Similarity NPD6667 Approved
0.6854 Remote Similarity NPD8397 Clinical (unspecified phase)
0.6845 Remote Similarity NPD7584 Approved
0.6842 Remote Similarity NPD8032 Phase 2
0.6839 Remote Similarity NPD651 Clinical (unspecified phase)
0.6836 Remote Similarity NPD8434 Phase 2
0.6832 Remote Similarity NPD6273 Approved
0.6828 Remote Similarity NPD4626 Approved

Structure

External Identifiers

PubChem CID   53324072
ChEMBL   CHEMBL1689180
ZINC  

Physicochemical Properties

Molecular Weight:  400.22
ALogP:  0.0752
MLogP:  3.55
XLogP:  5.318
# Rotatable Bonds:  16
Polar Surface Area:  83.83
# H-Bond Aceptor:  2
# H-Bond Donor:  2
# Rings:  2
# Heavy Atoms:  29

Download Data

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General Info & Identifiers & Properties  
Structure MOL file  
Source Organisms  
Biological Activities  
Similar NPs/Drugs