Structure

Physi-Chem Properties

Molecular Weight:  1870.16
Volume:  1641.557
LogP:  3.271
LogD:  1.464
LogS:  -4.394
# Rotatable Bonds:  8
TPSA:  877.36
# H-Bond Aceptor:  52
# H-Bond Donor:  29
# Rings:  16
# Heavy Atoms:  52

MedChem Properties

QED Drug-Likeness Score:  0.064
Synthetic Accessibility Score:  7.221
Fsp3:  0.146
Lipinski Rule-of-5:  Rejected
Pfizer Rule:  Accepted
GSK Rule:  Rejected
BMS Rule:  1
Golden Triangle Rule:  Rejected
Chelating Alert:  1
PAINS Alert:  1

ADMET Properties (ADMETlab2.0)

ADMET: Absorption

Caco-2 Permeability:  -8.024
MDCK Permeability:  2.3661330033064587e-06
Pgp-inhibitor:  0.015
Pgp-substrate:  0.0
Human Intestinal Absorption (HIA):  1.0
20% Bioavailability (F20%):  0.996
30% Bioavailability (F30%):  1.0

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB):  0.0
Plasma Protein Binding (PPB):  101.01388549804688%
Volume Distribution (VD):  -0.533
Pgp-substrate:  809.5023193359375%

ADMET: Metabolism

CYP1A2-inhibitor:  0.015
CYP1A2-substrate:  0.0
CYP2C19-inhibitor:  0.001
CYP2C19-substrate:  0.003
CYP2C9-inhibitor:  0.041
CYP2C9-substrate:  0.0
CYP2D6-inhibitor:  0.0
CYP2D6-substrate:  0.01
CYP3A4-inhibitor:  0.0
CYP3A4-substrate:  0.0

ADMET: Excretion

Clearance (CL):  12.356
Half-life (T1/2):  0.985

ADMET: Toxicity

hERG Blockers:  0.003
Human Hepatotoxicity (H-HT):  0.465
Drug-inuced Liver Injury (DILI):  1.0
AMES Toxicity:  0.03
Rat Oral Acute Toxicity:  0.0
Maximum Recommended Daily Dose:  0.023
Skin Sensitization:  0.982
Carcinogencity:  0.001
Eye Corrosion:  0.003
Eye Irritation:  0.973
Respiratory Toxicity:  0.0

Download Data

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General Info & Identifiers & Properties  
Structure MOL file  
Source Organisms  
Biological Activities  
Similar NPs/Drugs  

  Natural Product: NPC97924

Natural Product ID:  NPC97924
Common Name*:   FFZOOOCGCNFHAQ-GWOIDVGPSA-N
IUPAC Name:   n.a.
Synonyms:  
Standard InCHIKey:  FFZOOOCGCNFHAQ-GWOIDVGPSA-N
Standard InCHI:  InChI=1S/C82H54O52/c83-23-1-14(2-24(84)45(23)93)71(112)133-81-70-68(130-77(118)20-9-30(90)50(98)57(105)39(20)41-22(79(120)132-70)11-32(92)52(100)59(41)107)65-35(126-81)13-123-74(115)17-6-27(87)53(101)60(108)42(17)43-44(80(121)128-65)66(63(111)62(110)61(43)109)124-33-4-15(3-25(85)46(33)94)72(113)134-82-69-67(129-76(117)19-8-29(89)49(97)56(104)38(19)40-21(78(119)131-69)10-31(91)51(99)58(40)106)64-34(125-82)12-122-73(114)16-5-26(86)47(95)54(102)36(16)37-18(75(116)127-64)7-28(88)48(96)55(37)103/h1-11,34-35,64-65,67-70,81-111H,12-13H2/t34-,35-,64-,65-,67+,68+,69-,70-,81-,82+/m1/s1
SMILES:  c1c(cc(c(c1O)O)O)C(=O)O[C@@H]1[C@H]2[C@H]([C@H]3[C@@H](COC(=O)c4cc(c(c(c4-c4c(c(c(c(c4O)O)O)Oc4cc(cc(c4O)O)C(=O)O[C@H]4[C@H]5[C@H]([C@H]6[C@@H](COC(=O)c7cc(c(c(c7-c7c(cc(c(c7O)O)O)C(=O)O6)O)O)O)O4)OC(=O)c4cc(c(c(c4-c4c(cc(c(c4O)O)O)C(=O)O5)O)O)O)C(=O)O3)O)O)O)O1)OC(=O)c1cc(c(c(c1-c1c(cc(c(c1O)O)O)C(=O)O2)O)O)O
Synthetic Gene Cluster:   n.a.
ChEMBL Identifier:   CHEMBL508647
PubChem CID:   16130897
Chemical Classification**:  
  • CHEMONTID:0000000 [Organic compounds]
    • [CHEMONTID:0000261] Phenylpropanoids and polyketides
      • [CHEMONTID:0000238] Tannins
        • [CHEMONTID:0001710] Hydrolyzable tannins

*Note: the InCHIKey will be temporarily assigned as the "Common Name" if no IUPAC name or alternative short name is available.
**Note: the Chemical Classification was calculated by NPClassifier Version 1.5. Reference: PMID:34662515.

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO19774 Rubus idaeus Species n.a. n.a. Fruit n.a. n.a. DOI[10.1016/S0963-9969(99)00095-2]
NPO19774 Rubus idaeus Species n.a. n.a. n.a. n.a. n.a. PMID[21381697]
NPO19774 Rubus idaeus Species n.a. n.a. Fruit n.a. n.a. Database[FooDB]
NPO19774 Rubus idaeus Species n.a. n.a. Leaf n.a. n.a. Database[FooDB]
NPO19774 Rubus idaeus Species n.a. n.a. Seed n.a. n.a. Database[FooDB]
NPO19774 Rubus idaeus Species n.a. n.a. n.a. n.a. Database[FooDB]
NPO19774 Rubus idaeus Species n.a. n.a. Fruits n.a. Database[FooDB]
NPO19700 Aconitum talassicum Species Ranunculaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO19774 Rubus idaeus Species n.a. n.a. n.a. n.a. n.a. Database[HerDing]
NPO19774 Rubus idaeus Species n.a. n.a. Fruits n.a. Database[Phenol-Explorer]
NPO19774 Rubus idaeus Species n.a. n.a. n.a. n.a. Database[Phenol-Explorer]
NPO19774 Rubus idaeus Species n.a. n.a. n.a. n.a. n.a. Database[TCMID]
NPO19700 Aconitum talassicum Species Ranunculaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO19700 Aconitum talassicum Species Ranunculaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO26422 Rubus chingii Species Rosaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO26422 Rubus chingii Species Rosaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO18930 Rubus coreanus Species Rosaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO18930 Rubus coreanus Species Rosaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26422 Rubus chingii Species Rosaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19700 Aconitum talassicum Species Ranunculaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19774 Rubus idaeus Species n.a. n.a. n.a. n.a. n.a. Database[UNPD]
NPO10415 Paraphaeosphaeria minitans Species Didymosphaeriaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO24873 Anaphalis subumbellata Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25161 Peteravenia malvaefolia n.a. n.a. n.a. n.a. n.a. n.a. Database[UNPD]
NPO24812 Jaspis coriacea Species Ancorinidae Eukaryota n.a. n.a. n.a. Database[UNPD]

☑ Note for Reference:
In addition to directly collecting NP source organism data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated them from below databases:
UNPD: Universal Natural Products Database [PMID: 23638153].
StreptomeDB: a database of streptomycetes natural products [PMID: 33051671].
TM-MC: a database of medicinal materials and chemical compounds in Northeast Asian traditional medicine [PMID: 26156871].
TCM@Taiwan: a Traditional Chinese Medicine database [PMID: 21253603].
TCMID: a Traditional Chinese Medicine database [PMID: 29106634].
TCMSP: The traditional Chinese medicine systems pharmacology database and analysis platform [PMID: 24735618].
HerDing: a herb recommendation system to treat diseases using genes and chemicals [PMID: 26980517].
MetaboLights: a metabolomics database [PMID: 27010336].
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  NP Quantity Composition/Concentration

Organism ID NP ID Organism Material Preparation Organism Part NP Quantity (Standard) NP Quantity (Minimum) NP Quantity (Maximum) Quantity Unit Reference
NPO19774 NPC97924 n.a. Fruits 76.1 n.a. n.a. mg/100g of FW Database [Phenol-Explorer]

☑ Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP quantitative records for specific NP domains (e.g., NPS from foods or herbs) from domain-specific databases. These databases include:
DUKE: Dr. Duke's Phytochemical and Ethnobotanical Databases.
PHENOL EXPLORER: is the first comprehensive database on polyphenol content in foods [PMID: 24103452], its homepage can be accessed at here.
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT737 Cell Line HUVEC Homo sapiens Inhibition = 41.5 % PMID[464142]
NPT737 Cell Line HUVEC Homo sapiens Activity = 37.6 % PMID[464142]
NPT82 Cell Line MDA-MB-231 Homo sapiens Activity = 40.7 % PMID[464143]
NPT83 Cell Line MCF7 Homo sapiens Activity = 33.7 % PMID[464143]
NPT82 Cell Line MDA-MB-231 Homo sapiens Activity = 63.0 % PMID[464143]
NPT83 Cell Line MCF7 Homo sapiens Activity = 69.0 % PMID[464143]

☑ Note for Activity Records:
☉ The quantitative biological activities were primarily integrated from ChEMBL (Version-30) database and were also directly collected from PubMed literature. PubMed PMID was provided as the reference link for each activity record.

  Chemically structural similarity: I. Similar Active Natural Products in NPASS

Top-200 similar NPs were calculated against the active-NP-set (includes 4,3285 NPs with experimentally-derived bioactivity available in NPASS)

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC97924 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
1.0 High Similarity NPC40078
1.0 High Similarity NPC471091
0.9884 High Similarity NPC158214
0.9884 High Similarity NPC240200
0.9884 High Similarity NPC290289
0.9884 High Similarity NPC223534
0.9828 High Similarity NPC31208
0.9828 High Similarity NPC93065
0.9828 High Similarity NPC469652
0.9828 High Similarity NPC160543
0.9828 High Similarity NPC472724
0.9828 High Similarity NPC472720
0.9828 High Similarity NPC187632
0.9828 High Similarity NPC472721
0.9827 High Similarity NPC469649
0.9827 High Similarity NPC260521
0.9665 High Similarity NPC174140
0.9663 High Similarity NPC189312
0.9655 High Similarity NPC111490
0.9655 High Similarity NPC261623
0.9655 High Similarity NPC469650
0.9553 High Similarity NPC3474
0.9545 High Similarity NPC477083
0.9545 High Similarity NPC477081
0.9489 High Similarity NPC65489
0.9483 High Similarity NPC8940
0.9441 High Similarity NPC477082
0.9425 High Similarity NPC472726
0.9425 High Similarity NPC472725
0.9375 High Similarity NPC231254
0.933 High Similarity NPC264302
0.9326 High Similarity NPC269046
0.9314 High Similarity NPC80956
0.9274 High Similarity NPC201814
0.927 High Similarity NPC237202
0.92 High Similarity NPC297574
0.92 High Similarity NPC472723
0.9191 High Similarity NPC47521
0.9162 High Similarity NPC269625
0.9162 High Similarity NPC179947
0.9148 High Similarity NPC476618
0.9148 High Similarity NPC476619
0.9148 High Similarity NPC476622
0.9148 High Similarity NPC476621
0.9148 High Similarity NPC476623
0.9148 High Similarity NPC476620
0.9111 High Similarity NPC7839
0.9111 High Similarity NPC173872
0.9111 High Similarity NPC473618
0.9111 High Similarity NPC142291
0.9111 High Similarity NPC119094
0.9101 High Similarity NPC129533
0.9101 High Similarity NPC123259
0.9075 High Similarity NPC43918
0.9075 High Similarity NPC190204
0.9075 High Similarity NPC261411
0.905 High Similarity NPC49690
0.9045 High Similarity NPC125352
0.904 High Similarity NPC472387
0.9023 High Similarity NPC149300
0.9016 High Similarity NPC476358
0.9 High Similarity NPC112380
0.8994 High Similarity NPC476203
0.8989 High Similarity NPC471030
0.8983 High Similarity NPC472992
0.8983 High Similarity NPC472991
0.8978 High Similarity NPC470450
0.8977 High Similarity NPC473550
0.8966 High Similarity NPC311389
0.8966 High Similarity NPC31034
0.8966 High Similarity NPC470271
0.895 High Similarity NPC475179
0.8944 High Similarity NPC472722
0.8939 High Similarity NPC469371
0.8933 High Similarity NPC265380
0.892 High Similarity NPC67134
0.892 High Similarity NPC47140
0.892 High Similarity NPC100251
0.892 High Similarity NPC5786
0.892 High Similarity NPC102851
0.8914 High Similarity NPC95421
0.8914 High Similarity NPC198125
0.8908 High Similarity NPC175793
0.8895 High Similarity NPC104910
0.8895 High Similarity NPC229817
0.8895 High Similarity NPC221140
0.8895 High Similarity NPC475220
0.8895 High Similarity NPC473686
0.8895 High Similarity NPC474093
0.8895 High Similarity NPC475352
0.8889 High Similarity NPC132111
0.8889 High Similarity NPC97119
0.8889 High Similarity NPC135831
0.8889 High Similarity NPC470718
0.8889 High Similarity NPC297503
0.8883 High Similarity NPC185275
0.8876 High Similarity NPC67629
0.8876 High Similarity NPC79736
0.887 High Similarity NPC172033
0.887 High Similarity NPC34436
0.887 High Similarity NPC175230
0.887 High Similarity NPC98583
0.887 High Similarity NPC166674
0.887 High Similarity NPC219600
0.887 High Similarity NPC46640
0.887 High Similarity NPC88560
0.887 High Similarity NPC263119
0.8864 High Similarity NPC470272
0.8864 High Similarity NPC181778
0.8864 High Similarity NPC149011
0.8864 High Similarity NPC204937
0.8864 High Similarity NPC471416
0.8864 High Similarity NPC34287
0.8864 High Similarity NPC476365
0.8857 High Similarity NPC473818
0.8846 High Similarity NPC97817
0.8846 High Similarity NPC30011
0.8846 High Similarity NPC72554
0.8846 High Similarity NPC105591
0.884 High Similarity NPC470720
0.884 High Similarity NPC21359
0.884 High Similarity NPC460984
0.884 High Similarity NPC318119
0.884 High Similarity NPC470416
0.884 High Similarity NPC470713
0.884 High Similarity NPC470455
0.884 High Similarity NPC470451
0.884 High Similarity NPC470717
0.884 High Similarity NPC25946
0.8833 High Similarity NPC117668
0.8833 High Similarity NPC53680
0.8833 High Similarity NPC470452
0.8833 High Similarity NPC208797
0.8833 High Similarity NPC164047
0.8833 High Similarity NPC470453
0.8833 High Similarity NPC470448
0.8827 High Similarity NPC267549
0.8827 High Similarity NPC471789
0.882 High Similarity NPC142996
0.882 High Similarity NPC102028
0.8814 High Similarity NPC65333
0.8814 High Similarity NPC3583
0.8814 High Similarity NPC259152
0.8814 High Similarity NPC472386
0.8807 High Similarity NPC112755
0.8807 High Similarity NPC170675
0.8807 High Similarity NPC197708
0.8807 High Similarity NPC471457
0.8807 High Similarity NPC183036
0.8807 High Similarity NPC658
0.8791 High Similarity NPC295625
0.8791 High Similarity NPC473554
0.8791 High Similarity NPC470719
0.8791 High Similarity NPC87583
0.8785 High Similarity NPC150977
0.8785 High Similarity NPC321916
0.8785 High Similarity NPC199172
0.8785 High Similarity NPC470446
0.8785 High Similarity NPC162394
0.8785 High Similarity NPC470445
0.8785 High Similarity NPC241781
0.8785 High Similarity NPC470447
0.8785 High Similarity NPC35924
0.8785 High Similarity NPC475662
0.8785 High Similarity NPC293227
0.8785 High Similarity NPC473631
0.8785 High Similarity NPC36138
0.8785 High Similarity NPC473717
0.8785 High Similarity NPC470449
0.8785 High Similarity NPC156785
0.8778 High Similarity NPC84494
0.8778 High Similarity NPC324742
0.8778 High Similarity NPC245059
0.8771 High Similarity NPC268533
0.8764 High Similarity NPC472993
0.8764 High Similarity NPC204693
0.8764 High Similarity NPC163165
0.8764 High Similarity NPC51774
0.8764 High Similarity NPC239549
0.8764 High Similarity NPC236191
0.8757 High Similarity NPC474434
0.8757 High Similarity NPC44558
0.8757 High Similarity NPC22195
0.8757 High Similarity NPC52353
0.8757 High Similarity NPC183357
0.8757 High Similarity NPC224462
0.8757 High Similarity NPC21190
0.875 High Similarity NPC217781
0.875 High Similarity NPC298847
0.875 High Similarity NPC45400
0.875 High Similarity NPC249977
0.8736 High Similarity NPC275977
0.8736 High Similarity NPC14030
0.8736 High Similarity NPC223860
0.8736 High Similarity NPC291957
0.8736 High Similarity NPC249560
0.8729 High Similarity NPC170203
0.8722 High Similarity NPC258044
0.8722 High Similarity NPC120952
0.8722 High Similarity NPC475261

  Chemically structural similarity: II. Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC97924 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.8652 High Similarity NPD7472 Approved
0.8652 High Similarity NPD7074 Phase 3
0.8634 High Similarity NPD8397 Clinical (unspecified phase)
0.8611 High Similarity NPD4338 Clinical (unspecified phase)
0.8603 High Similarity NPD7993 Clinical (unspecified phase)
0.8596 High Similarity NPD7054 Approved
0.8564 High Similarity NPD8313 Approved
0.8564 High Similarity NPD8312 Approved
0.8555 High Similarity NPD4868 Clinical (unspecified phase)
0.8508 High Similarity NPD7808 Phase 3
0.8453 Intermediate Similarity NPD7251 Discontinued
0.8436 Intermediate Similarity NPD3818 Discontinued
0.8398 Intermediate Similarity NPD6797 Phase 2
0.8333 Intermediate Similarity NPD1465 Phase 2
0.8324 Intermediate Similarity NPD6167 Clinical (unspecified phase)
0.8324 Intermediate Similarity NPD6166 Phase 2
0.8324 Intermediate Similarity NPD6168 Clinical (unspecified phase)
0.8287 Intermediate Similarity NPD5844 Phase 1
0.8265 Intermediate Similarity NPD8151 Discontinued
0.8245 Intermediate Similarity NPD7879 Clinical (unspecified phase)
0.8192 Intermediate Similarity NPD4381 Clinical (unspecified phase)
0.8156 Intermediate Similarity NPD6959 Discontinued
0.8132 Intermediate Similarity NPD7228 Approved
0.8111 Intermediate Similarity NPD6232 Discontinued
0.8087 Intermediate Similarity NPD7804 Clinical (unspecified phase)
0.8077 Intermediate Similarity NPD7473 Discontinued
0.8068 Intermediate Similarity NPD1934 Approved
0.8023 Intermediate Similarity NPD2801 Approved
0.8023 Intermediate Similarity NPD8455 Phase 2
0.7923 Intermediate Similarity NPD7852 Clinical (unspecified phase)
0.7921 Intermediate Similarity NPD2393 Clinical (unspecified phase)
0.7921 Intermediate Similarity NPD7819 Suspended
0.791 Intermediate Similarity NPD7783 Phase 2
0.791 Intermediate Similarity NPD7782 Clinical (unspecified phase)
0.7901 Intermediate Similarity NPD5494 Approved
0.7861 Intermediate Similarity NPD6559 Discontinued
0.7845 Intermediate Similarity NPD6234 Discontinued
0.7833 Intermediate Similarity NPD7768 Phase 2
0.779 Intermediate Similarity NPD7075 Discontinued
0.779 Intermediate Similarity NPD3749 Approved
0.7789 Intermediate Similarity NPD8055 Clinical (unspecified phase)
0.7778 Intermediate Similarity NPD3817 Phase 2
0.7766 Intermediate Similarity NPD7240 Approved
0.776 Intermediate Similarity NPD7199 Phase 2
0.7742 Intermediate Similarity NPD3751 Discontinued
0.774 Intermediate Similarity NPD1653 Approved
0.7739 Intermediate Similarity NPD7435 Discontinued
0.7735 Intermediate Similarity NPD3882 Suspended
0.7717 Intermediate Similarity NPD3787 Discontinued
0.77 Intermediate Similarity NPD7870 Phase 2
0.77 Intermediate Similarity NPD7871 Phase 2
0.768 Intermediate Similarity NPD8443 Clinical (unspecified phase)
0.768 Intermediate Similarity NPD5402 Approved
0.7676 Intermediate Similarity NPD7184 Clinical (unspecified phase)
0.7672 Intermediate Similarity NPD7685 Pre-registration
0.7667 Intermediate Similarity NPD37 Approved
0.7654 Intermediate Similarity NPD4380 Phase 2
0.765 Intermediate Similarity NPD7698 Approved
0.765 Intermediate Similarity NPD7696 Phase 3
0.765 Intermediate Similarity NPD7697 Approved
0.7637 Intermediate Similarity NPD4966 Approved
0.7637 Intermediate Similarity NPD4965 Approved
0.7637 Intermediate Similarity NPD4967 Phase 2
0.7624 Intermediate Similarity NPD7096 Clinical (unspecified phase)
0.7614 Intermediate Similarity NPD1511 Approved
0.7611 Intermediate Similarity NPD7411 Suspended
0.7598 Intermediate Similarity NPD7874 Approved
0.7598 Intermediate Similarity NPD7875 Clinical (unspecified phase)
0.7588 Intermediate Similarity NPD6778 Approved
0.7588 Intermediate Similarity NPD6776 Approved
0.7588 Intermediate Similarity NPD6777 Approved
0.7588 Intermediate Similarity NPD6779 Approved
0.7588 Intermediate Similarity NPD6781 Approved
0.7588 Intermediate Similarity NPD6782 Approved
0.7588 Intermediate Similarity NPD6780 Approved
0.7586 Intermediate Similarity NPD7701 Phase 2
0.7584 Intermediate Similarity NPD6980 Clinical (unspecified phase)
0.7528 Intermediate Similarity NPD1512 Approved
0.7487 Intermediate Similarity NPD7699 Phase 2
0.7487 Intermediate Similarity NPD7700 Phase 2
0.7429 Intermediate Similarity NPD1549 Phase 2
0.7426 Intermediate Similarity NPD6823 Phase 2
0.7406 Intermediate Similarity NPD8155 Clinical (unspecified phase)
0.7391 Intermediate Similarity NPD7801 Approved
0.7389 Intermediate Similarity NPD7680 Approved
0.7377 Intermediate Similarity NPD6801 Discontinued
0.7371 Intermediate Similarity NPD1550 Clinical (unspecified phase)
0.7371 Intermediate Similarity NPD1552 Clinical (unspecified phase)
0.7363 Intermediate Similarity NPD7237 Clinical (unspecified phase)
0.7353 Intermediate Similarity NPD8320 Phase 1
0.7353 Intermediate Similarity NPD8319 Approved
0.7345 Intermediate Similarity NPD3750 Approved
0.7337 Intermediate Similarity NPD6534 Approved
0.7337 Intermediate Similarity NPD6535 Approved
0.733 Intermediate Similarity NPD970 Clinical (unspecified phase)
0.7318 Intermediate Similarity NPD7390 Discontinued
0.7318 Intermediate Similarity NPD6143 Clinical (unspecified phase)
0.7318 Intermediate Similarity NPD6799 Approved
0.7296 Intermediate Similarity NPD8150 Discontinued
0.7293 Intermediate Similarity NPD5403 Approved
0.7278 Intermediate Similarity NPD2534 Approved
0.7278 Intermediate Similarity NPD7410 Clinical (unspecified phase)
0.7278 Intermediate Similarity NPD2533 Approved
0.7278 Intermediate Similarity NPD2532 Approved
0.7273 Intermediate Similarity NPD7266 Discontinued
0.7268 Intermediate Similarity NPD6599 Discontinued
0.7213 Intermediate Similarity NPD7458 Discontinued
0.7211 Intermediate Similarity NPD3926 Phase 2
0.7207 Intermediate Similarity NPD6190 Approved
0.7184 Intermediate Similarity NPD230 Phase 1
0.7182 Intermediate Similarity NPD5401 Approved
0.7182 Intermediate Similarity NPD7422 Clinical (unspecified phase)
0.7182 Intermediate Similarity NPD4378 Clinical (unspecified phase)
0.7159 Intermediate Similarity NPD1510 Phase 2
0.7121 Intermediate Similarity NPD8434 Phase 2
0.712 Intermediate Similarity NPD3226 Approved
0.712 Intermediate Similarity NPD5808 Clinical (unspecified phase)
0.7119 Intermediate Similarity NPD2935 Discontinued
0.7119 Intermediate Similarity NPD2796 Approved
0.7114 Intermediate Similarity NPD6212 Phase 3
0.7114 Intermediate Similarity NPD6214 Clinical (unspecified phase)
0.7114 Intermediate Similarity NPD6213 Phase 3
0.7105 Intermediate Similarity NPD1247 Approved
0.709 Intermediate Similarity NPD919 Approved
0.7088 Intermediate Similarity NPD7004 Clinical (unspecified phase)
0.7086 Intermediate Similarity NPD1933 Approved
0.7073 Intermediate Similarity NPD7501 Clinical (unspecified phase)
0.7062 Intermediate Similarity NPD3748 Approved
0.7056 Intermediate Similarity NPD4628 Phase 3
0.7029 Intermediate Similarity NPD1612 Clinical (unspecified phase)
0.7029 Intermediate Similarity NPD1613 Approved
0.7029 Intermediate Similarity NPD943 Approved
0.7022 Intermediate Similarity NPD5405 Approved
0.7022 Intermediate Similarity NPD5408 Approved
0.7022 Intermediate Similarity NPD5406 Approved
0.7022 Intermediate Similarity NPD1551 Phase 2
0.7022 Intermediate Similarity NPD5404 Approved
0.702 Intermediate Similarity NPD7090 Clinical (unspecified phase)
0.7016 Intermediate Similarity NPD8127 Discontinued
0.701 Intermediate Similarity NPD8090 Clinical (unspecified phase)
0.7 Intermediate Similarity NPD7421 Clinical (unspecified phase)
0.7 Intermediate Similarity NPD6674 Discontinued
0.6989 Remote Similarity NPD447 Suspended
0.6979 Remote Similarity NPD7229 Phase 3
0.6965 Remote Similarity NPD4287 Approved
0.6961 Remote Similarity NPD1878 Clinical (unspecified phase)
0.6952 Remote Similarity NPD7584 Approved
0.6941 Remote Similarity NPD5619 Clinical (unspecified phase)
0.6936 Remote Similarity NPD1530 Clinical (unspecified phase)
0.6932 Remote Similarity NPD1240 Approved
0.6923 Remote Similarity NPD8058 Clinical (unspecified phase)
0.6923 Remote Similarity NPD8059 Phase 3
0.6919 Remote Similarity NPD7549 Discontinued
0.6914 Remote Similarity NPD6859 Clinical (unspecified phase)
0.6905 Remote Similarity NPD7211 Clinical (unspecified phase)
0.6897 Remote Similarity NPD1529 Clinical (unspecified phase)
0.6891 Remote Similarity NPD5711 Approved
0.6891 Remote Similarity NPD5710 Approved
0.6889 Remote Similarity NPD2346 Discontinued
0.6884 Remote Similarity NPD7930 Approved
0.6872 Remote Similarity NPD651 Clinical (unspecified phase)
0.6868 Remote Similarity NPD6398 Clinical (unspecified phase)
0.6868 Remote Similarity NPD8166 Discontinued
0.6868 Remote Similarity NPD7003 Approved
0.6854 Remote Similarity NPD1607 Approved
0.6842 Remote Similarity NPD5006 Approved
0.6842 Remote Similarity NPD5005 Approved
0.6842 Remote Similarity NPD5353 Approved
0.684 Remote Similarity NPD7585 Approved
0.6837 Remote Similarity NPD7177 Discontinued
0.6828 Remote Similarity NPD920 Approved
0.6818 Remote Similarity NPD5953 Discontinued
0.6811 Remote Similarity NPD642 Clinical (unspecified phase)
0.6802 Remote Similarity NPD7286 Phase 2
0.6792 Remote Similarity NPD7583 Approved
0.6778 Remote Similarity NPD1509 Clinical (unspecified phase)
0.6769 Remote Similarity NPD5242 Approved
0.6761 Remote Similarity NPD3027 Phase 3
0.674 Remote Similarity NPD6099 Approved
0.674 Remote Similarity NPD6100 Approved
0.6731 Remote Similarity NPD4420 Approved
0.6723 Remote Similarity NPD3764 Approved
0.6722 Remote Similarity NPD7097 Phase 1
0.6721 Remote Similarity NPD2800 Approved
0.6721 Remote Similarity NPD1243 Approved
0.6705 Remote Similarity NPD6832 Phase 2
0.6705 Remote Similarity NPD4908 Phase 1
0.6703 Remote Similarity NPD2344 Approved
0.6703 Remote Similarity NPD643 Clinical (unspecified phase)
0.6699 Remote Similarity NPD8285 Discontinued
0.6697 Remote Similarity NPD7907 Approved
0.6685 Remote Similarity NPD2799 Discontinued
0.6685 Remote Similarity NPD6233 Phase 2
0.6684 Remote Similarity NPD6273 Approved
0.6683 Remote Similarity NPD8054 Approved
0.6683 Remote Similarity NPD8053 Approved
0.6681 Remote Similarity NPD8152 Approved
0.6681 Remote Similarity NPD8153 Approved
0.6667 Remote Similarity NPD6841 Approved
0.6667 Remote Similarity NPD4288 Approved

  Bioactivity similarity: Similar Natural Products in NPASS

Bioactivity similarity was calculated based on bioactivity descriptors of compounds. The bioactivity descriptors were calculated by a recently developed AI algorithm Chemical Checker (CC) [Nature Biotechnology, 38:1087–1096, 2020; Nature Communications, 12:3932, 2021], which evaluated bioactivity similarities at five levels:
A: chemistry similarity;
B: biological targets similarity;
C: networks similarity;
D: cell-based bioactivity similarity;
E: similarity based on clinical data.

Those 5 categories of CC bioactivity descriptors were calculated and then subjected to manifold projection using UMAP algorithm, to project all NPs on a 2-Dimensional space. The current NP was highlighted with a small circle in the 2-D map. Below figures: left-to-right, A-to-E.

A: chemistry similarity
B: biological targets similarity
C: networks similarity
D: cell-based bioactivity similarity
E: similarity based on clinical data