Organism Name: Rubus xanthocarpus

Organism ID:   NPO28344
Organism Name:   Rubus xanthocarpus
Native / Engineered Organism:   Native Organism
Matched Taxonomy Level:   Species
Organism External ID:   NCBI_Taxonomy_ID[ n.a.]
Organism Synonyms:  
Genus:   Rubus
Family:   Rosaceae
Kingdom:   Viridiplantae
SuperKingdom:   Eukaryota

  Individual Natural Products

Natural Product ID Prefer Name (or InChiKey) IUPAC Name Number of Targets Number of Activity Records
NPC247553 Umbelliferone 7-hydroxychromen-2-one 147 285
NPC176740 Rutin 2-(3,4-dihydroxyphenyl)-5,7-dihydroxy-3-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-[[(2R,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxymethyl]oxan-2-yl]oxychromen-4-one 103 333
NPC51700 Ursolic Acid (1S,2R,4aS,6aR,6aS,6bR,8aR,10S,12aR,14bS)-10-hydroxy-1,2,6a,6b,9,9,12a-heptamethyl-2,3,4,5,6,6a,7,8,8a,10,11,12,13,14b-tetradecahydro-1H-picene-4a-carboxylic acid 175 680
NPC102949 BXYSGLMDXBBDOL-PVOLRHMGSA-N n.a. 0 0
NPC74764 LQIRTDPVBLPFPL-WOTQVPQLSA-N n.a. 0 0
NPC127546 Quercetin-3-O-Rhamnoside 2-(3,4-dihydroxyphenyl)-5,7-dihydroxy-3-[(2R,3S,4S,5S,6R)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxychromen-4-one 7 7
NPC219863 GKQZXBSVYRXUOV-MMOXWZNWSA-N n.a. 0 0
NPC242631 OJUYFGQEMPENCE-DPKHZRJYSA-N n.a. 1 3
NPC210867 HLJFBQPJDDSYQN-DXCOEPAXSA-N n.a. 0 0
NPC105095 Neohesperidin (2S)-7-[(2S,3R,4S,5S,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-5-hydroxy-2-(3-hydroxy-4-methoxyphenyl)-2,3-dihydrochromen-4-one 7 7
NPC302634 CKFYUMFIMANAFG-MLGRCLDVSA-N n.a. 0 0
NPC298851 Methyl (1S,4As,5As,6R,10Ar)-1-Methyl-2'-Oxospiro[1,4A,5,5A,7,8,10,10A-Octahydropyrano[3,4-F]Indolizine-6,3'-1H-Indole]-4-Carboxylate methyl (1S,4aS,5aS,6R,10aR)-1-methyl-2'-oxospiro[1,4a,5,5a,7,8,10,10a-octahydropyrano[3,4-f]indolizine-6,3'-1H-indole]-4-carboxylate 1 1
NPC22563 IKGXIBQEEMLURG-BKUODXTLSA-N n.a. 0 0
NPC41121 Kaempferol-3-O-Rhamnoside 5,7-dihydroxy-2-(4-hydroxyphenyl)-3-[(2R,3S,4S,5S,6R)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxychromen-4-one 4 5
NPC91556 HDYDLPHIKADNNA-ODZBHSGWSA-N n.a. 0 0
NPC243728 Daucosterol (2R,3R,4S,5S,6R)-2-[[(3S,8S,9S,10R,13R,14S,17R)-17-[(2R,5R)-5-ethyl-6-methylheptan-2-yl]-10,13-dimethyl-2,3,4,7,8,9,11,12,14,15,16,17-dodecahydro-1H-cyclopenta[a]phenanthren-3-yl]oxy]-6-(hydroxymethyl)oxane-3,4,5-triol 37 69
NPC181138 Methyl (1R,4As,5As,6S,10Ar)-1-Methyl-2'-Oxospiro[1,4A,5,5A,7,8,10,10A-Octahydropyrano[3,4-F]Indolizine-6,3'-1H-Indole]-4-Carboxylate methyl (1R,4aS,5aS,6S,10aR)-1-methyl-2'-oxospiro[1,4a,5,5a,7,8,10,10a-octahydropyrano[3,4-f]indolizine-6,3'-1H-indole]-4-carboxylate 2 2
NPC170707 CESLMJOIHBNCGO-MEYMADEWSA-N n.a. 0 0
NPC14185 SKKCWALCJXDUKO-UWIFJTNZSA-N n.a. 0 0
NPC281131 Hyperoside 2-(3,4-dihydroxyphenyl)-5,7-dihydroxy-3-[(2S,3R,4S,5R,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxychromen-4-one 58 115
NPC120781 LQIRTDPVBLPFPL-HMCPGHOPSA-N n.a. 0 0
NPC49124 UYBXAQMZXHETFV-ZPPUMIHBSA-N n.a. 0 0
NPC208699 CWVRJTMFETXNAD-JURSRTDWSA-N n.a. 0 0

  NPs produced by Co-culture Organisms (for Co-culture organisms, the full organism list can be found HERE)

Organism Name Producer Organism Inducer Organism NP ID NP Name Effect of Co-culture Reference

  NPs produced by Engineered Organisms (for Engineered organisms, the full organism list can be found HERE)

Organism Name Parent Organism Name Engineered Gene in Organism Purpose of Engineering Engineering Category Engineering Description NP ID NP Name NP Yeild of Parent Organism NP Yeild of Engineered Organism Yeild Change Reference

  The Quantitative Compositions of NPs in Organism

Organism ID NP ID Organism Material Preparation Organism Part NP Quantity (Standard) NP Quantity (Minimum) NP Quantity (Maximum) Quantity Unit Reference