Natural Product: NPC84793
Natural Product ID:   | NPC84793 |
Common Name*:   | RPMNUQRUHXIGHK-DOVNQBDMSA-N |
IUPAC Name:   | n.a. |
Synonyms:   | |
Standard InCHIKey:   | RPMNUQRUHXIGHK-DOVNQBDMSA-N |
Standard InCHI:   | InChI=1S/C27H30O14/c1-10-20(32)22(34)24(36)26(37-10)41-25-23(35)21(33)18(9-28)40-27(25)38-13-6-14(30)19-15(31)8-16(39-17(19)7-13)11-2-4-12(29)5-3-11/h2-8,10,18,20-30,32-36H,9H2,1H3/t10-,18+,20-,21+,22+,23-,24+,25+,26-,27?/m0/s1 |
SMILES:   | C[C@H]1[C@@H]([C@H]([C@H]([C@@H](O1)O[C@@H]1[C@H]([C@@H]([C@@H](CO)OC1Oc1cc(c2c(=O)cc(c3ccc(cc3)O)oc2c1)O)O)O)O)O)O
|
Synthetic Gene Cluster:   |
n.a. |
ChEMBL Identifier:   |
n.a. |
PubChem CID:   |
45479322 |
Chemical Classification**:   |
-
CHEMONTID:0000000 [Organic compounds]
-
[CHEMONTID:0000261] Phenylpropanoids and polyketides
-
[CHEMONTID:0000334] Flavonoids
[CHEMONTID:0001111] Flavonoid glycosides[CHEMONTID:0001583] Flavonoid O-glycosides[CHEMONTID:0003533] Flavonoid-7-O-glycosides
|
*Note: the InCHIKey will be temporarily assigned as the "Common Name" if no IUPAC name or alternative short name is available.
**Note: the Chemical Classification was calculated by NPClassifier Version 1.5. Reference: PMID:34662515.
  Species Source
Organism ID |
Organism Name |
Taxonomy Level |
Family |
SuperKingdom |
Isolation Part |
Collection Location |
Collection Time |
Reference |
NPO20440 |
Chrysanthemum x morifolium |
Species |
Asteraceae |
Eukaryota |
Flowers |
n.a. |
n.a. |
DOI[10.1016/j.foodchem.2009.03.042] |
NPO27288 |
Citrus maxima |
Species |
Rutaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
DOI[10.1016/S0031-9422(99)00119-3] |
NPO20440 |
Chrysanthemum x morifolium |
Species |
Asteraceae |
Eukaryota |
Flowers |
n.a. |
n.a. |
DOI[10.3136/fstr.15.499] |
NPO20440 |
Chrysanthemum x morifolium |
Species |
Asteraceae |
Eukaryota |
Flowers |
n.a. |
n.a. |
DOI[10.5897/AJB10.140] |
NPO20440 |
Chrysanthemum x morifolium |
Species |
Asteraceae |
Eukaryota |
Flowers |
n.a. |
n.a. |
DOI[10.5897/AJB2010.000-3252] |
NPO7317 |
Citrus aurantium |
Species |
Rutaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
PMID[10606602] |
NPO2726 |
Ligustrum robustum |
Species |
Oleaceae |
Eukaryota |
leaves |
n.a. |
n.a. |
PMID[12828473] |
NPO16039 |
Scutellaria barbata |
Species |
Lamiaceae |
Eukaryota |
n.a. |
whole plant |
n.a. |
PMID[16755060] |
NPO16039 |
Scutellaria barbata |
Species |
Lamiaceae |
Eukaryota |
n.a. |
aerial part |
n.a. |
PMID[17666848] |
NPO5270 |
Citrus natsudaidai |
Species |
Rutaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
PMID[17689080] |
NPO26770 |
Pteris multifida |
Species |
Pteridaceae |
Eukaryota |
Whole plant |
n.a. |
n.a. |
PMID[18181575] |
NPO16039 |
Scutellaria barbata |
Species |
Lamiaceae |
Eukaryota |
n.a. |
aerial part |
n.a. |
PMID[18239311] |
NPO16039 |
Scutellaria barbata |
Species |
Lamiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
PMID[19785430] |
NPO16039 |
Scutellaria barbata |
Species |
Lamiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
PMID[19962306] |
NPO16039 |
Scutellaria barbata |
Species |
Lamiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
PMID[20078074] |
NPO8666 |
Acorus tatarinowii |
Species |
Acoraceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
PMID[20476749] |
NPO5681 |
Acorus gramineus |
Species |
Acoraceae |
Eukaryota |
n.a. |
rhizome |
n.a. |
PMID[21936523] |
NPO5681 |
Acorus gramineus |
Species |
Acoraceae |
Eukaryota |
Rhizomes |
n.a. |
n.a. |
PMID[21936523] |
NPO5681 |
Acorus gramineus |
Species |
Acoraceae |
Eukaryota |
rhizomes |
n.a. |
n.a. |
PMID[22951040] |
NPO8666 |
Acorus tatarinowii |
Species |
Acoraceae |
Eukaryota |
n.a. |
rhizome |
n.a. |
PMID[23713285] |
NPO21771 |
Citrus trifoliata |
Species |
Rutaceae |
Eukaryota |
n.a. |
fruit |
n.a. |
PMID[23872723] |
NPO20440 |
Chrysanthemum x morifolium |
Species |
Asteraceae |
Eukaryota |
Flowers |
Tongxiang, China |
n.a. |
PMID[24621197] |
NPO16039 |
Scutellaria barbata |
Species |
Lamiaceae |
Eukaryota |
whole plants |
Nanning District, Guangxi Province, China |
2012-Sep |
PMID[25647077] |
NPO8666 |
Acorus tatarinowii |
Species |
Acoraceae |
Eukaryota |
rhizomes |
n.a. |
n.a. |
PMID[26296476] |
NPO8666 |
Acorus tatarinowii |
Species |
Acoraceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
PMID[26305406] |
NPO16039 |
Scutellaria barbata |
Species |
Lamiaceae |
Eukaryota |
aerial parts |
Seoul, Korea |
n.a. |
PMID[26331882] |
NPO20440 |
Chrysanthemum x morifolium |
Species |
Asteraceae |
Eukaryota |
Flowers |
n.a. |
n.a. |
PMID[28248102] |
NPO8666 |
Acorus tatarinowii |
Species |
Acoraceae |
Eukaryota |
Rhizomes |
n.a. |
n.a. |
PMID[29116780] |
NPO21771 |
Citrus trifoliata |
Species |
Rutaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
PMID[32996318] |
NPO27288 |
Citrus maxima |
Species |
Rutaceae |
Eukaryota |
|
n.a. |
n.a. |
Database[FooDB] |
NPO26770 |
Pteris multifida |
Species |
Pteridaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO28841 |
Fructus aurantii |
n.a. |
n.a. |
n.a. |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO16308 |
Citrus wilsonii |
Species |
Rutaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO24652 |
Toxicodendron succedaneum |
Species |
Anacardiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO15730 |
Citrus medica |
Species |
Rutaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO12235 |
Trachelospermum jasminoides |
Species |
Apocynaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO7317 |
Citrus aurantium |
Species |
Rutaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO8666 |
Acorus tatarinowii |
Species |
Acoraceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO16039 |
Scutellaria barbata |
Species |
Lamiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO18366 |
Papaver commutatum |
Species |
Papaveraceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO5681 |
Acorus gramineus |
Species |
Acoraceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO27288 |
Citrus maxima |
Species |
Rutaceae |
Eukaryota |
n.a. |
n.a. |
|
Database[Phenol-Explorer] |
NPO5681 |
Acorus gramineus |
Species |
Acoraceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO938 |
Toxicodendron sylvestre |
Species |
Anacardiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO16039 |
Scutellaria barbata |
Species |
Lamiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO21771 |
Citrus trifoliata |
Species |
Rutaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO27288 |
Citrus maxima |
Species |
Rutaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO4109 |
Exocarpium citri grandis |
n.a. |
n.a. |
n.a. |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO8666 |
Acorus tatarinowii |
Species |
Acoraceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO20440 |
Chrysanthemum x morifolium |
Species |
Asteraceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO8692.1 |
Citrus grandis var. tomentosa |
Varieties |
Rutaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO12235 |
Trachelospermum jasminoides |
Species |
Apocynaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO28841 |
Fructus aurantii |
n.a. |
n.a. |
n.a. |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO7317 |
Citrus aurantium |
Species |
Rutaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO2726 |
Ligustrum robustum |
Species |
Oleaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO16308 |
Citrus wilsonii |
Species |
Rutaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO24652 |
Toxicodendron succedaneum |
Species |
Anacardiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO15730 |
Citrus medica |
Species |
Rutaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO18366 |
Papaver commutatum |
Species |
Papaveraceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO4203 |
Phlomoides rotata |
Species |
Lamiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO26770 |
Pteris multifida |
Species |
Pteridaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO15730 |
Citrus medica |
Species |
Rutaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCM_Taiwan] |
NPO7317 |
Citrus aurantium |
Species |
Rutaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCM_Taiwan] |
NPO12235 |
Trachelospermum jasminoides |
Species |
Apocynaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCM_Taiwan] |
NPO24652 |
Toxicodendron succedaneum |
Species |
Anacardiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCM_Taiwan] |
NPO18366 |
Papaver commutatum |
Species |
Papaveraceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCM_Taiwan] |
NPO16039 |
Scutellaria barbata |
Species |
Lamiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCM_Taiwan] |
NPO16308 |
Citrus wilsonii |
Species |
Rutaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCM_Taiwan] |
NPO8666 |
Acorus tatarinowii |
Species |
Acoraceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCM_Taiwan] |
NPO5270 |
Citrus natsudaidai |
Species |
Rutaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[Title] |
NPO6361 |
Turpinia arguta |
Species |
Staphyleaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TM-MC] |
NPO7317 |
Citrus aurantium |
Species |
Rutaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TM-MC] |
NPO5681 |
Acorus gramineus |
Species |
Acoraceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TM-MC] |
NPO5270 |
Citrus natsudaidai |
Species |
Rutaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TM-MC] |
NPO16308 |
Citrus wilsonii |
Species |
Rutaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TM-MC] |
NPO20440 |
Chrysanthemum x morifolium |
Species |
Asteraceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TM-MC] |
NPO21771 |
Citrus trifoliata |
Species |
Rutaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TM-MC] |
NPO12235 |
Trachelospermum jasminoides |
Species |
Apocynaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TM-MC] |
NPO4203 |
Phlomoides rotata |
Species |
Lamiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TM-MC] |
NPO16039 |
Scutellaria barbata |
Species |
Lamiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TM-MC] |
NPO15730 |
Citrus medica |
Species |
Rutaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TM-MC] |
NPO27288 |
Citrus maxima |
Species |
Rutaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TM-MC] |
NPO8666 |
Acorus tatarinowii |
Species |
Acoraceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TM-MC] |
NPO8666 |
Acorus tatarinowii |
Species |
Acoraceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO24652 |
Toxicodendron succedaneum |
Species |
Anacardiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO5270 |
Citrus natsudaidai |
Species |
Rutaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO4203 |
Phlomoides rotata |
Species |
Lamiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO7317 |
Citrus aurantium |
Species |
Rutaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO16308 |
Citrus wilsonii |
Species |
Rutaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO12235 |
Trachelospermum jasminoides |
Species |
Apocynaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO21771 |
Citrus trifoliata |
Species |
Rutaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO26770 |
Pteris multifida |
Species |
Pteridaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO18366 |
Papaver commutatum |
Species |
Papaveraceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO15730 |
Citrus medica |
Species |
Rutaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO16039 |
Scutellaria barbata |
Species |
Lamiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO20440 |
Chrysanthemum x morifolium |
Species |
Asteraceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO27288 |
Citrus maxima |
Species |
Rutaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
☑ Note for Reference:
In addition to directly collecting NP source organism data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated them from below databases:
☉ UNPD: Universal Natural Products Database [PMID: 23638153].
☉ StreptomeDB: a database of streptomycetes natural products [PMID: 33051671].
☉ TM-MC: a database of medicinal materials and chemical compounds in Northeast Asian traditional medicine [PMID: 26156871].
☉ TCM@Taiwan: a Traditional Chinese Medicine database [PMID: 21253603].
☉ TCMID: a Traditional Chinese Medicine database [PMID: 29106634].
☉ TCMSP: The traditional Chinese medicine systems pharmacology database and analysis platform [PMID: 24735618].
☉ HerDing: a herb recommendation system to treat diseases using genes and chemicals [PMID: 26980517].
☉ MetaboLights: a metabolomics database [PMID: 27010336].
☉ FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].
  NP Quantity Composition/Concentration
Organism ID |
NP ID |
Organism Material Preparation |
Organism Part |
NP Quantity (Standard) |
NP Quantity (Minimum) |
NP Quantity (Maximum) |
Quantity Unit |
Reference |
☑ Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP quantitative records for specific NP domains (e.g., NPS from foods or herbs) from domain-specific databases. These databases include:
☉ DUKE: Dr. Duke's Phytochemical and Ethnobotanical Databases.
☉ PHENOL EXPLORER: is the first comprehensive database on polyphenol content in foods [PMID: 24103452], its homepage can be accessed at here.
☉ FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].
  Biological Activity
Target ID |
Target Type |
Target Name |
Target Organism |
Activity Type |
Activity Relation |
Value |
Unit |
Reference |
☑ Note for Activity Records:
☉ The quantitative biological activities were primarily integrated from ChEMBL (Version-30) database and were also directly collected from PubMed literature. PubMed PMID was provided as the reference link for each activity record.
  Chemically structural similarity: I. Similar Active Natural Products in NPASS
Top-200 similar NPs were calculated against the active-NP-set (includes 4,3285 NPs with experimentally-derived bioactivity available in NPASS)
Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient
●  The left chart: Distribution of similarity level between NPC84793 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).
range |
Tanimoto Coefficient |
0-0.1 | 412 |
0.1-0.2 | 1654 |
0.2-0.3 | 3750 |
0.3-0.4 | 9375 |
0.4-0.5 | 9271 |
0.5-0.6 | 4764 |
0.6-0.7 | 5846 |
0.7-0.8 | 5346 |
0.8-0.85 | 1406 |
0.85-0.9 | 513 |
0.9-0.95 | 304 |
0.95-1 | 56 |
Similarity Score |
Similarity Level |
Natural Product ID |
  Chemically structural similarity: II. Similar Clinical/Approved Drugs
Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.
●  The left chart: Distribution of similarity level between NPC84793 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).
range |
Tanimoto Coefficient |
0-0.1 | 365 |
0.1-0.2 | 896 |
0.2-0.3 | 1743 |
0.3-0.4 | 2753 |
0.4-0.5 | 2005 |
0.5-0.6 | 973 |
0.6-0.7 | 257 |
0.7-0.8 | 127 |
0.8-0.85 | 20 |
0.85-0.9 | 4 |
0.9-0.95 | 7 |
0.95-1 | 0 |
Similarity Score |
Similarity Level |
Drug ID |
Developmental Stage |