Natural Product: NPC81559
Natural Product ID:   | NPC81559 |
Common Name*:   | CDYBOKJASDEORM-HBVDJMOISA-N |
IUPAC Name:   | n.a. |
Synonyms:   | |
Standard InCHIKey:   | CDYBOKJASDEORM-HBVDJMOISA-N |
Standard InCHI:   | InChI=1S/C19H18O11/c20-4-11-15(26)16(27)17(28)19(30-11)13-9(24)2-8(23)12-14(25)5-1-6(21)7(22)3-10(5)29-18(12)13/h1-3,11,15-17,19-24,26-28H,4H2/t11-,15-,16+,17-,19+/m1/s1 |
SMILES:   | c1c2c(cc(c1O)O)oc1c(c(cc(c1[C@H]1[C@@H]([C@H]([C@@H]([C@@H](CO)O1)O)O)O)O)O)c2=O
|
Synthetic Gene Cluster:   |
n.a. |
ChEMBL Identifier:   |
n.a. |
PubChem CID:   |
5318597 |
Chemical Classification**:   |
-
CHEMONTID:0000000 [Organic compounds]
-
[CHEMONTID:0000002] Organoheterocyclic compounds
-
[CHEMONTID:0000123] Benzopyrans
[CHEMONTID:0003410] 1-benzopyrans[CHEMONTID:0002817] Dibenzopyrans[CHEMONTID:0000200] Xanthenes[CHEMONTID:0000204] Xanthones
|
*Note: the InCHIKey will be temporarily assigned as the "Common Name" if no IUPAC name or alternative short name is available.
**Note: the Chemical Classification was calculated by NPClassifier Version 1.5. Reference: PMID:34662515.
  Species Source
Organism ID |
Organism Name |
Taxonomy Level |
Family |
SuperKingdom |
Isolation Part |
Collection Location |
Collection Time |
Reference |
NPO29314 |
Mangifera indica |
Species |
Anacardiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
DOI[10.1246/bcsj.30.618] |
NPO29276 |
Juglans nigra |
Species |
Juglandaceae |
Eukaryota |
n.a. |
bark |
n.a. |
PMID[14727919] |
NPO29276 |
Juglans nigra |
Species |
Juglandaceae |
Eukaryota |
n.a. |
xylem |
n.a. |
PMID[14727919] |
NPO29276 |
Juglans nigra |
Species |
Juglandaceae |
Eukaryota |
n.a. |
root |
n.a. |
PMID[14727919] |
NPO29276 |
Juglans nigra |
Species |
Juglandaceae |
Eukaryota |
n.a. |
leaf |
n.a. |
PMID[14727919] |
NPO8327 |
Cyclopia subternata |
Species |
Fabaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
PMID[15315375] |
NPO29530 |
Kaempferia marginata |
Species |
Zingiberaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
PMID[16309313] |
NPO27743 |
Aaptos aaptos |
Species |
Suberitidae |
Eukaryota |
n.a. |
n.a. |
n.a. |
PMID[17716892] |
NPO3784 |
Saccharopolyspora spinosa |
Species |
Pseudonocardiaceae |
Bacteria |
n.a. |
n.a. |
n.a. |
PMID[18345667] |
NPO8327 |
Cyclopia subternata |
Species |
Fabaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
PMID[19272608] |
NPO28864 |
Nauclea officinalis |
Species |
Rubiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
PMID[19299148] |
NPO29381 |
Trichilia rubescens |
Species |
Meliaceae |
Eukaryota |
leaves |
Kibale National Park, Uganda |
2000-2001 |
PMID[19299148] |
NPO26741 |
Anemarrhena asphodeloides |
Species |
Asparagaceae |
Eukaryota |
rhizomes |
n.a. |
n.a. |
PMID[19757853] |
NPO26741 |
Anemarrhena asphodeloides |
Species |
Asparagaceae |
Eukaryota |
n.a. |
rhizome |
n.a. |
PMID[21370894] |
NPO7528 |
Belamcanda chinensis |
Species |
Iridaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
PMID[21465599] |
NPO7528 |
Belamcanda chinensis |
Species |
Iridaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
PMID[25036154] |
NPO27743 |
Aaptos aaptos |
Species |
Suberitidae |
Eukaryota |
n.a. |
South China Sea |
n.a. |
PMID[25211032] |
NPO16850 |
Eucommia ulmoides |
Species |
Eucommiaceae |
Eukaryota |
n.a. |
bark |
n.a. |
PMID[26767291] |
NPO16850 |
Eucommia ulmoides |
Species |
Eucommiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
PMID[26767291] |
NPO29314 |
Mangifera indica |
Species |
Anacardiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
PMID[27466882] |
NPO4055 |
Aspergillus unguis |
Species |
Aspergillaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
PMID[31117521] |
NPO7528 |
Belamcanda chinensis |
Species |
Iridaceae |
Eukaryota |
Rhizomes |
n.a. |
n.a. |
PMID[31246464] |
NPO29530 |
Kaempferia marginata |
Species |
Zingiberaceae |
Eukaryota |
Rhizomes |
n.a. |
n.a. |
PMID[31873014] |
NPO26741 |
Anemarrhena asphodeloides |
Species |
Asparagaceae |
Eukaryota |
Rhizomes |
n.a. |
n.a. |
PMID[8482946] |
NPO29276 |
Juglans nigra |
Species |
Juglandaceae |
Eukaryota |
Shoot |
n.a. |
n.a. |
Database[FooDB] |
NPO29314 |
Mangifera indica |
Species |
Anacardiaceae |
Eukaryota |
n.a. |
n.a. |
|
Database[FooDB] |
NPO29276 |
Juglans nigra |
Species |
Juglandaceae |
Eukaryota |
|
n.a. |
n.a. |
Database[FooDB] |
NPO29314 |
Mangifera indica |
Species |
Anacardiaceae |
Eukaryota |
|
n.a. |
n.a. |
Database[FooDB] |
NPO29276 |
Juglans nigra |
Species |
Juglandaceae |
Eukaryota |
Essential Oil |
n.a. |
n.a. |
Database[FooDB] |
NPO29314 |
Mangifera indica |
Species |
Anacardiaceae |
Eukaryota |
Flower |
n.a. |
n.a. |
Database[FooDB] |
NPO29276 |
Juglans nigra |
Species |
Juglandaceae |
Eukaryota |
Fruit |
n.a. |
n.a. |
Database[FooDB] |
NPO29314 |
Mangifera indica |
Species |
Anacardiaceae |
Eukaryota |
Fruit |
n.a. |
n.a. |
Database[FooDB] |
NPO29276 |
Juglans nigra |
Species |
Juglandaceae |
Eukaryota |
Leaf |
n.a. |
n.a. |
Database[FooDB] |
NPO29314 |
Mangifera indica |
Species |
Anacardiaceae |
Eukaryota |
Leaf |
n.a. |
n.a. |
Database[FooDB] |
NPO29276 |
Juglans nigra |
Species |
Juglandaceae |
Eukaryota |
Pericarp |
n.a. |
n.a. |
Database[FooDB] |
NPO29276 |
Juglans nigra |
Species |
Juglandaceae |
Eukaryota |
Seed |
n.a. |
n.a. |
Database[FooDB] |
NPO29314 |
Mangifera indica |
Species |
Anacardiaceae |
Eukaryota |
Seed |
n.a. |
n.a. |
Database[FooDB] |
NPO29004 |
Ruta pinnata |
Species |
Rutaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO28949 |
Croton cumingii |
Species |
Euphorbiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO29331 |
Pyrrosia sheareri |
Species |
Polypodiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO24078 |
Pyrrosia petiolosa |
Species |
Polypodiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO28864 |
Nauclea officinalis |
Species |
Rubiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO16850 |
Eucommia ulmoides |
Species |
Eucommiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO1639 |
Pyrrosia lingua |
Species |
Polypodiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO15181 |
Pyrrosia pseudocalvata |
Species |
Polypodiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO29314 |
Mangifera indica |
Species |
Anacardiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO29276 |
Juglans nigra |
Species |
Juglandaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO26741 |
Anemarrhena asphodeloides |
Species |
Asparagaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO29314 |
Mangifera indica |
Species |
Anacardiaceae |
Eukaryota |
Fruits |
n.a. |
|
Database[Phenol-Explorer] |
NPO28949 |
Croton cumingii |
Species |
Euphorbiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO29344 |
Parabenzoin trilobum |
n.a. |
n.a. |
n.a. |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO15181 |
Pyrrosia pseudocalvata |
Species |
Polypodiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO28864 |
Nauclea officinalis |
Species |
Rubiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO29530 |
Kaempferia marginata |
Species |
Zingiberaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO29314 |
Mangifera indica |
Species |
Anacardiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO25889 |
Pyrrosia subfurfuracea |
Species |
Polypodiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO16850 |
Eucommia ulmoides |
Species |
Eucommiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO24078 |
Pyrrosia petiolosa |
Species |
Polypodiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO4055 |
Aspergillus unguis |
Species |
Aspergillaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO1639 |
Pyrrosia lingua |
Species |
Polypodiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO29276 |
Juglans nigra |
Species |
Juglandaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO28805 |
Thymus piperella |
Species |
Lamiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO29004 |
Ruta pinnata |
Species |
Rutaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO7528 |
Belamcanda chinensis |
Species |
Iridaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO26741 |
Anemarrhena asphodeloides |
Species |
Asparagaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO29331 |
Pyrrosia sheareri |
Species |
Polypodiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO28864 |
Nauclea officinalis |
Species |
Rubiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCM_Taiwan] |
NPO29331 |
Pyrrosia sheareri |
Species |
Polypodiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCM_Taiwan] |
NPO26741 |
Anemarrhena asphodeloides |
Species |
Asparagaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCM_Taiwan] |
NPO29314 |
Mangifera indica |
Species |
Anacardiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCM_Taiwan] |
NPO16850 |
Eucommia ulmoides |
Species |
Eucommiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCM_Taiwan] |
NPO1639 |
Pyrrosia lingua |
Species |
Polypodiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCM_Taiwan] |
NPO29276 |
Juglans nigra |
Species |
Juglandaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCM_Taiwan] |
NPO16445 |
Pyrrosia tricuspis |
Species |
Polypodiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TM-MC] |
NPO16850 |
Eucommia ulmoides |
Species |
Eucommiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TM-MC] |
NPO26741 |
Anemarrhena asphodeloides |
Species |
Asparagaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TM-MC] |
NPO29331 |
Pyrrosia sheareri |
Species |
Polypodiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TM-MC] |
NPO1639 |
Pyrrosia lingua |
Species |
Polypodiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TM-MC] |
NPO24078 |
Pyrrosia petiolosa |
Species |
Polypodiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TM-MC] |
NPO7528 |
Belamcanda chinensis |
Species |
Iridaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TM-MC] |
NPO29203 |
Gymnocarpium robertianum |
Species |
Cystopteridaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO29510 |
Aulacocephalus temmincki |
Species |
Serranidae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO29276 |
Juglans nigra |
Species |
Juglandaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO29068 |
Papilio phorcas |
Species |
Papilionidae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO29314 |
Mangifera indica |
Species |
Anacardiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO28971 |
Bersama yangambiensis |
Species |
Melianthaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO29450 |
Streptomyces parvisporogenes |
Species |
Streptomycetaceae |
Bacteria |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO29154 |
Heliotropium floridum |
Species |
Heliotropiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO4055 |
Aspergillus unguis |
Species |
Aspergillaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO3340 |
Fridericia chica |
Species |
Bignoniaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO29292 |
Teucrium depressum |
Species |
Lamiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO13818 |
Narcissus concolor |
Species |
Amaryllidaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO26741 |
Anemarrhena asphodeloides |
Species |
Asparagaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO29242 |
Salvia dorrii |
Species |
Lamiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO40 |
Ostryopsis davidiana |
Species |
Betulaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO28784 |
Alseodaphne corneri |
Species |
Lauraceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO29331 |
Pyrrosia sheareri |
Species |
Polypodiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO6594 |
Hypericum sikokumontanum |
Species |
Hypericaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO16850 |
Eucommia ulmoides |
Species |
Eucommiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO29189 |
Castanopsis sclerophylla |
Species |
Fagaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO29225 |
Oncoba echinata |
Species |
Salicaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO4698 |
Polymnia uvedalia |
Species |
Asteraceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO1245 |
Eunicella cavolinii |
Species |
Gorgoniidae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO28949 |
Croton cumingii |
Species |
Euphorbiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO1639 |
Pyrrosia lingua |
Species |
Polypodiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO4244 |
Doodia picta |
Species |
Blechnaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO29127 |
Cystophora scalaris |
Species |
Sargassaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO29363 |
Aconitum nevadense |
Species |
Ranunculaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO29142 |
Kaunia saltensis |
Species |
Asteraceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO29381 |
Trichilia rubescens |
Species |
Meliaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO8327 |
Cyclopia subternata |
Species |
Fabaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO3784 |
Saccharopolyspora spinosa |
Species |
Pseudonocardiaceae |
Bacteria |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO28898 |
Grewia mollis |
Species |
Malvaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO26192 |
Cordylanthus kingii |
Species |
Orobanchaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO28805 |
Thymus piperella |
Species |
Lamiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO28937 |
Heterotheca grandiflora |
Species |
Asteraceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO969 |
Streptomyces setonensis |
Species |
Streptomycetaceae |
Bacteria |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO29400 |
Conocephalum japonicum |
Species |
Conocephalaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO25981 |
Crinipellis scabella |
Species |
Marasmiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO1889 |
Panorpa japonica |
Species |
Panorpidae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO28845 |
Eragrostis viscosa |
Species |
Poaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO5633 |
Osyris abyssinica |
Species |
Santalaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO29446 |
Stevia polycephala |
Species |
Asteraceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO3744 |
Polycephalomyces nipponicus |
Species |
Ophiocordycipitaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO29530 |
Kaempferia marginata |
Species |
Zingiberaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO7528 |
Belamcanda chinensis |
Species |
Iridaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO9157 |
Rubrivivax gelatinosus |
Species |
n.a. |
Bacteria |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO28864 |
Nauclea officinalis |
Species |
Rubiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO29488 |
Sophora angustifolia |
Species |
Fabaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO27269 |
Annona impressivenia |
Species |
Annonaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO28824 |
Forsteronia refracta |
Species |
Apocynaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO28918 |
Ophiolepis superba |
Species |
Ophiolepididae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO29344 |
Parabenzoin trilobum |
n.a. |
n.a. |
n.a. |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO29415 |
Hovenia acerba |
Species |
Rhamnaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO29004 |
Ruta pinnata |
Species |
Rutaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO29047 |
Disynaphia halimifolia |
Species |
Asteraceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO27743 |
Aaptos aaptos |
Species |
Suberitidae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
☑ Note for Reference:
In addition to directly collecting NP source organism data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated them from below databases:
☉ UNPD: Universal Natural Products Database [PMID: 23638153].
☉ StreptomeDB: a database of streptomycetes natural products [PMID: 33051671].
☉ TM-MC: a database of medicinal materials and chemical compounds in Northeast Asian traditional medicine [PMID: 26156871].
☉ TCM@Taiwan: a Traditional Chinese Medicine database [PMID: 21253603].
☉ TCMID: a Traditional Chinese Medicine database [PMID: 29106634].
☉ TCMSP: The traditional Chinese medicine systems pharmacology database and analysis platform [PMID: 24735618].
☉ HerDing: a herb recommendation system to treat diseases using genes and chemicals [PMID: 26980517].
☉ MetaboLights: a metabolomics database [PMID: 27010336].
☉ FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].
  NP Quantity Composition/Concentration
Organism ID |
NP ID |
Organism Material Preparation |
Organism Part |
NP Quantity (Standard) |
NP Quantity (Minimum) |
NP Quantity (Maximum) |
Quantity Unit |
Reference |
☑ Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP quantitative records for specific NP domains (e.g., NPS from foods or herbs) from domain-specific databases. These databases include:
☉ DUKE: Dr. Duke's Phytochemical and Ethnobotanical Databases.
☉ PHENOL EXPLORER: is the first comprehensive database on polyphenol content in foods [PMID: 24103452], its homepage can be accessed at here.
☉ FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].
  Biological Activity
Target ID |
Target Type |
Target Name |
Target Organism |
Activity Type |
Activity Relation |
Value |
Unit |
Reference |
☑ Note for Activity Records:
☉ The quantitative biological activities were primarily integrated from ChEMBL (Version-30) database and were also directly collected from PubMed literature. PubMed PMID was provided as the reference link for each activity record.
  Chemically structural similarity: I. Similar Active Natural Products in NPASS
Top-200 similar NPs were calculated against the active-NP-set (includes 4,3285 NPs with experimentally-derived bioactivity available in NPASS)
Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient ![](images/questionmark.png)
●  The left chart: Distribution of similarity level between NPC81559 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).
range |
Tanimoto Coefficient |
0-0.1 | 475 |
0.1-0.2 | 1906 |
0.2-0.3 | 4420 |
0.3-0.4 | 10596 |
0.4-0.5 | 7639 |
0.5-0.6 | 3958 |
0.6-0.7 | 5195 |
0.7-0.8 | 4547 |
0.8-0.85 | 2223 |
0.85-0.9 | 1426 |
0.9-0.95 | 304 |
0.95-1 | 8 |
Similarity Score |
Similarity Level |
Natural Product ID |
  Chemically structural similarity: II. Similar Clinical/Approved Drugs
Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.
●  The left chart: Distribution of similarity level between NPC81559 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).
range |
Tanimoto Coefficient |
0-0.1 | 427 |
0.1-0.2 | 958 |
0.2-0.3 | 2055 |
0.3-0.4 | 2664 |
0.4-0.5 | 1692 |
0.5-0.6 | 899 |
0.6-0.7 | 295 |
0.7-0.8 | 111 |
0.8-0.85 | 25 |
0.85-0.9 | 21 |
0.9-0.95 | 3 |
0.95-1 | 0 |
Similarity Score |
Similarity Level |
Drug ID |
Developmental Stage |