Natural Product: NPC475462| Natural Product ID | NPC475462 |
|
Common Name
The InCHIKey will be temporarily assigned as the "Common Name" if no IUPAC name or alternative short name is available.
| Azadirachtin A |
| IUPAC Name | n.a. |
| Synonyms | |
| Synthetic Gene Cluster | n.a. |
| ChEMBL Identifier | CHEMBL506084 |
| PubChem CID |
44584063 |
| Chemical Classification |
|
The Chemical Classification was calculated by Classyfire, a software for chemical taxonomy calculation. Reference: DOI:10.1186/s13321-016-0174-y.
Chemical Representations
| Standard InCHIKey | FTNJWQUOZFUQQJ-GEPYADMXSA-N |
| Standard InCHI | InChI=1S/C35H44O16/c1-8-15(2)24(38)49-18-12-19(48-16(3)36)32(26(39)43-6)13-46-21-22(32)31(18)14-47-34(42,27(40)44-7)25(31)29(4,23(21)37)35-20-11-17(30(35,5)51-35)33(41)9-10-45-28(33)50-20/h8-10,17-23,25,28,37,41-42H,11-14H2,1-7H3/b15-8+/t17-,18-,19+,20+,21+,22+,23+,25-,28-,29+,30-,31-,32-,33-,34-,35-/m0/s1 |
| SMILES | C/C=C(C)/C(=O)O[C@H]1C[C@H]([C@]2(CO[C@@H]3[C@@H]2[C@@]21CO[C@@]([C@H]2[C@@](C)([C@@H]3O)[C@@]12[C@H]3C[C@@H]([C@]1(C)O2)[C@]1(C=CO[C@H]1O3)O)(C(=O)OC)O)C(=O)OC)OC(=O)C |
  Calculated Properties| Molecular Weight:   | 720.26 | Volume:   | 670.289 Van der Waals volume.
|
| Dense:   | 1.075 | LogP:   | 1.142 The logarithm of the n-octanol/water distribution coefficients.
|
| logD7.4:   | 1.611 The logarithm of the n-octanol/water distribution coefficient at pH=7.4.
|
LogS:   | -3.021 The logarithm of aqueous solubility value.
|
| Rotatable Bonds:   | 10.0 | Rigid Bonds:   | 38.0 |
| TPSA:   | 215.34 Topological Polar Surface Area.
|
H-Bond Acceptor:   | 16.0 |
| H-Bond Donor:   | 3.0 | Rings:   | 8.0 |
| Heavy Atoms:   | 16.0 |
| QED Drug-Likeness Score:   | 0.14 | GASA:   | 1.0 GASA represents the probability of being difficult to synthesize, ranging from 0 to 1.
|
| Synthetic Accessibility Score:   | 7.579 | Fsp3:   | 0.771 |
| MCE-18:   | 215.065 MCE-18 stands for medicinal chemistry evolution.MCE-18≥45 is considered a suitable value.
|
Lipinski Rule-of-5:   | Accepted |
| Pfizer Rule:   | Rejected | GSK Rule:   | Accepted |
| Golden Triangle Rule:   | Accepted | BMS Rule:   | 0 |
| Chelating Alert:   | 0 | PAINS Alert:   | 0 |
| Colloidal aggregators:   | 0.483 | Fluc inhibitor:   | 0.014 The fluc inhibitor value is the probability of being fLuc inhibitors, within the range of 0 to 1.
|
| Blue fluorescence:   | 0.004 The blue fluorescence value is the probability of being blue fluorescence, within the range of 0 to 1
|
Green fluorescence:   | 0.004 The green fluorescence value is the probability of being green fluorescence, within the range of 0 to 1
|
| Reactive compounds:   | 0.095 | Promiscuous compounds:   | 0.682 |
| Caco-2 Permeability:   | -5.47 | MDCK Permeability:   | -5.029 |
| Pgp-inhibitor:   | 0.001 | Pgp-substrate:   | 0.871 |
| PAMPA:   |
0.999 The experimental data for Peff was logarithmically transformed (logPeff). Molecules with log Peff values below 2.0 were classified as low-permeability (Category 0), while those with log Peff values exceeding 2.5 were classified as high-permeability (Category 1).
|
Human Intestinal Absorption (HIA):   | 0.025 |
| 20% Bioavailability (F20%):   | 0.772 | 30% Bioavailability (F30%):   | 0.948 |
| 50% Bioavailability (F50%):   | 0.998 |
| Blood-Brain-Barrier Penetration (BBB):   | 0.002 | MRP1:   | 0.999 |
| Plasma Protein Binding (PPB):   | 66.665% | Volume Distribution (VD):   | -0.306 |
| Fu: |
29.028% The fraction unbound in plasms.
|
OATP1B1 inhibitor:   | 0.973 |
| OATP1B3 inhibitor:   | 0.87 | BCRP inhibitor:   | 0.019 |
| BSEP inhibitor:   | 0.467 |
| CYP1A2-inhibitor:   | 0.016 | CYP1A2-substrate:   | 0.119 |
| CYP2C19-inhibitor:   | 0.004 | CYP2C19-substrate:   | 0.001 |
| CYP2C9-inhibitor:   | 0.0 | CYP2C9-substrate:   | 0.001 |
| CYP2D6-inhibitor:   | 0.0 | CYP2D6-substrate:   | 0.938 |
| CYP3A4-inhibitor:   | 0.194 | CYP3A4-substrate:   | 0.083 |
| CYP2B6-substrate:   | 0.0 | CYP2C8-inhibitor:   | 0.999 |
| HLM stability:   |
0.99 Human liver microsomal (HLM) stability. Category 0: stable+ (HLM > 30 min); Category 1: unstable- (HLM ≤ 30 min). The output value is the probability of human liver microsomal instability, where a value closer to 1 indicates a higher likelihood of instability.
|
| Clearance (CL):   | 2.826 | Half-life (T1/2):   | 2.401 |
| hERG Blockers:   | 0.011 | hERG Blockers (10um):   | 0.104 |
| Human Hepatotoxicity (H-HT):   | 0.392 | Drug-induced Liver Injury (DILI):   | 0.93 |
| AMES Toxicity:   | 0.983 | Rat Oral Acute Toxicity:   | 0.942 |
| Maximum Recommended Daily Dose:   | 0.957 | Skin Sensitization:   | 1.0 |
| Carcinogencity:   | 0.463 | Eye Corrosion:   | 0.0 |
| Eye Irritation:   | 0.012 | Respiratory Toxicity:   | 0.95 |
| Drug-induced Neurotoxicity:   | 0.8 | Ototoxicity:   | 0.905 |
| Hematotoxicity:   | 0.591 | Drug-induced Nephrotoxicity:   | 0.986 |
| Genotoxicity:   | 0.997 | RPMI-8226 Immunitoxicity:   | 0.547 |
| A549 Cytotoxicity:   | 0.253 | Hek293 Cytotoxicity:   | 0.31 |
| BCF:   |
0.463 Bioconcentration factors are used for considering secondary poisoning potential and assessing risks to human health via the food chain. The unit is -log10[(mg/L)/(1000*MW)].
|
IGC50:   |
3.608 48 hour Tetrahymena pyriformis IGC50. The unit of IGC50 is -log10[(mg/L)/(1000*MW)].
|
| LC50DM:   |
5.829 48 hour Daphnia magna LC50. The unit of LC50DM is -log10[(mg/L)/(1000*MW)].
|
LC50FM:   |
4.805 96 hour fathead minnow LC50. The unit of LC50FM is -log10[(mg/L)/(1000*MW)].
|
  Species Source| Organism ID | Organism Name | Taxonomy Level | Family | SuperKingdom | Isolation Part | Collection Location | Collection Time | Reference |
|---|---|---|---|---|---|---|---|---|
| NPO9112 | Maytenus sp. | Species | Celastraceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[10637057] |
| NPO33100 | clerodendron sp. | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[12617583] |
| NPO10033 | Turraea pubescens | Species | Meliaceae | Eukaryota | twig | Dongfang, Hainan Province, China | 2010-Mar |
PMID[23734701] |
| NPO10033 | Turraea pubescens | Species | Meliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO9112 | Maytenus sp. | Species | Celastraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO10033 | Turraea pubescens | Species | Meliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
Note for Reference:
In addition to directly collecting NP source organism data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated them from below databases:
☉ UNPD: Universal Natural Products Database [PMID: 23638153].
☉ StreptomeDB: a database of streptomycetes natural products [PMID: 33051671].
☉ TM-MC: a database of medicinal materials and chemical compounds in Northeast Asian traditional medicine [PMID: 26156871].
☉ TCM@Taiwan: a Traditional Chinese Medicine database [PMID: 21253603].
☉ TCMID: a Traditional Chinese Medicine database [PMID: 29106634].
☉ TCMSP: The traditional Chinese medicine systems pharmacology database and analysis platform [PMID: 24735618].
☉ HerDing: a herb recommendation system to treat diseases using genes and chemicals [PMID: 26980517].
☉ MetaboLights: a metabolomics database [PMID: 27010336].
☉ FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].
  NP Quantity Composition/Concentration| Organism ID | Organism Name | Organism Material Preparation | Organism Part | NP Quantity (Standard) | NP Quantity (Minimum) | NP Quantity (Maximum) | Quantity Unit | Reference |
|---|
Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP quantitative records for specific NP domains (e.g., NPS from foods or herbs) from domain-specific databases. These databases include:
☉ DUKE: Dr. Duke's Phytochemical and Ethnobotanical Databases.
☉ PHENOL EXPLORER: is the first comprehensive database on polyphenol content in foods [PMID: 24103452], its homepage can be accessed at here.
☉ FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].
Biological Activity
| Target ID | Target Type | Target Name | Target Organism | Activity Type | Activity Relation | Value | Unit | Reference |
|---|---|---|---|---|---|---|---|---|
| NPT72 | Individual protein | Solute carrier organic anion transporter family member 1B3 | Homo sapiens | Inhibition | = | 74.42 | % | PMID[19581457] |
| NPT73 | Individual protein | Solute carrier organic anion transporter family member 1B1 | Homo sapiens | Inhibition | = | 51.12 | % | PMID[22642560] |
| Target ID | Target Type | Target Name | Target Organism | Activity Type | Activity Relation | Value | Unit | Reference |
|---|---|---|---|---|---|---|---|---|
| NPT113 | Cell line | RAW264.7 | Mus musculus | IC50 | > | 20000.0 | nM | PMID[23398362] |
| NPT116 | Cell line | HL-60 | Homo sapiens | IC50 | < | 10000.0 | nM | PMID[20619938] |
| NPT4520 | Organism | Lymantria dispar | Lymantria dispar | EC50 | = | 0.6 | ug/g | DrugMatrix in vivo data: Biochemistry |
| NPT776 | Organism | Spodoptera littoralis | Spodoptera littoralis | EC50 | = | 0.11 | ug/g | DrugMatrix in vivo data: Biochemistry |
| NPT3773 | Organism | Epilachna varivestis | Epilachna varivestis | Activity | = | 90.0 | % | PMID[15730244] |
| NPT3773 | Organism | Epilachna varivestis | Epilachna varivestis | Activity | = | 30.0 | % | PMID[14971898] |
| NPT3773 | Organism | Epilachna varivestis | Epilachna varivestis | Activity | = | 60.0 | % | PMID[26789657] |
| NPT1769 | Organism | Mythimna separata | Mythimna separata | EC50 | = | 579.43 | nM | PMID[17923492] |
| NPT1769 | Organism | Mythimna separata | Mythimna separata | EC50 | = | 0.58 | ug.mL-1 | PMID[15656657] |
| NPT776 | Organism | Spodoptera littoralis | Spodoptera littoralis | AFI | = | 99.0 | % | DOI[10.1016/S0040-4020(01)96211-8] |
| NPT776 | Organism | Spodoptera littoralis | Spodoptera littoralis | AFI | = | 100.0 | % | DOI[10.1016/S0040-4020(01)96211-8] |
| NPT849 | Organism | Plutella xylostella | Plutella xylostella | Activity | = | 10.1 | % | PMID[23030848] |
| NPT849 | Organism | Plutella xylostella | Plutella xylostella | Activity | = | 5.1 | % | PMID[20004577] |
| NPT849 | Organism | Plutella xylostella | Plutella xylostella | Activity | = | 2.1 | % | PMID[1800632] |
| NPT849 | Organism | Plutella xylostella | Plutella xylostella | Activity | <= | 2.0 | % | PMID[1800632] |
| NPT849 | Organism | Plutella xylostella | Plutella xylostella | Activity | = | 2.0 | mm | PMID[1800632] |
| NPT849 | Organism | Plutella xylostella | Plutella xylostella | Activity | = | 2.5 | mm | PMID[20035557] |
| NPT849 | Organism | Plutella xylostella | Plutella xylostella | Activity | = | 2.2 | mm | PMID[18348533] |
| NPT849 | Organism | Plutella xylostella | Plutella xylostella | Activity | = | 13.5 | mm | PMID[20035557] |
| NPT849 | Organism | Plutella xylostella | Plutella xylostella | Activity | = | 14.7 | mm | PubChem BioAssay data set |
| NPT849 | Organism | Plutella xylostella | Plutella xylostella | Activity | = | 14.8 | mm | PMID[10096858] |
| NPT849 | Organism | Plutella xylostella | Plutella xylostella | Activity | = | 0.013 | mg | PMID[20138519] |
| NPT849 | Organism | Plutella xylostella | Plutella xylostella | Activity | = | 0.012 | mg | PMID[20138519] |
| NPT849 | Organism | Plutella xylostella | Plutella xylostella | Activity | = | 0.016 | mg | PMID[16562846] |
| NPT849 | Organism | Plutella xylostella | Plutella xylostella | Activity | = | 66.2 | % | DrugMatrix in vitro pharmacology data |
| NPT849 | Organism | Plutella xylostella | Plutella xylostella | Activity | = | 75.2 | % | DrugMatrix in vitro pharmacology data |
| NPT849 | Organism | Plutella xylostella | Plutella xylostella | Activity | = | 61.6 | % | DrugMatrix in vitro pharmacology data |
| NPT6597 | Organism | Ostrinia furnacalis | Ostrinia furnacalis | Activity | = | 1.2 | mg | PMID[1336040] |
| NPT6597 | Organism | Ostrinia furnacalis | Ostrinia furnacalis | Activity | = | 7.8 | mg | PMID[20196571] |
| NPT6597 | Organism | Ostrinia furnacalis | Ostrinia furnacalis | Activity | = | 22.0 | mg | PMID[17341114] |
| NPT6597 | Organism | Ostrinia furnacalis | Ostrinia furnacalis | FDI | = | 59.9 | % | PMID[12502400] |
| NPT849 | Organism | Plutella xylostella | Plutella xylostella | AFC50 | = | 9.3 | ug ml-1 | PMID[19318121] |
| NPT722 | Organism | Athelia rolfsii | Athelia rolfsii | ED50 | = | 93.6 | ppm | PMID[20020916] |
| NPT722 | Organism | Athelia rolfsii | Athelia rolfsii | ED50 | = | 121.9 | ppm | PMID[19473028] |
| NPT722 | Organism | Athelia rolfsii | Athelia rolfsii | ED50 | = | 140.5 | ppm | PMID[8759172] |
| NPT529 | Organism | Rhizoctonia solani | Rhizoctonia solani | ED50 | = | 104.8 | ppm | PubChem BioAssay data set |
| NPT529 | Organism | Rhizoctonia solani | Rhizoctonia solani | ED50 | = | 132.2 | ppm | PubChem BioAssay data set |
| NPT529 | Organism | Rhizoctonia solani | Rhizoctonia solani | ED50 | = | 165.2 | ppm | PubChem BioAssay data set |
| NPT1769 | Organism | Mythimna separata | Mythimna separata | AFI | = | 43.8 | % | DOI[10.1584/jpestics.G11-47] |
| NPT1769 | Organism | Mythimna separata | Mythimna separata | AFI | = | 37.3 | % | DOI[10.1584/jpestics.G11-47] |
| NPT3915 | Organism | Helicoverpa armigera | Helicoverpa armigera | GI | <= | 80.0 | % | PMID[16643029] |
| NPT3915 | Organism | Helicoverpa armigera | Helicoverpa armigera | Inhibition | <= | 76.0 | % | PMID[19105653] |
| NPT3915 | Organism | Helicoverpa armigera | Helicoverpa armigera | EC50 | = | 0.4 | ppm | PMID[4020828] |
| NPT3915 | Organism | Helicoverpa armigera | Helicoverpa armigera | EC95 | = | 1.46 | ppm | PMID[23454511] |
| NPT3915 | Organism | Helicoverpa armigera | Helicoverpa armigera | EC50 | = | 0.26 | ppm | PMID[19459645] |
| NPT780 | Organism | Sitophilus zeamais | Sitophilus zeamais | EC50 | = | 57.0 | ppm | PMID[8377014] |
| NPT1637 | Organism | Cydia pomonella | Cydia pomonella | Activity | = | 0.0 | n.a. | PMID[6533259] |
| NPT1637 | Organism | Cydia pomonella | Cydia pomonella | Activity | = | 0.3 | n.a. | PMID[6533259] |
| NPT1637 | Organism | Cydia pomonella | Cydia pomonella | Activity | = | 100.0 | % | PMID[25237727] |
| NPT1637 | Organism | Cydia pomonella | Cydia pomonella | Activity | = | 70.0 | % | PMID[25237727] |
| NPT1637 | Organism | Cydia pomonella | Cydia pomonella | Activity | = | 76.7 | % | PMID[18163588] |
| NPT3915 | Organism | Helicoverpa armigera | Helicoverpa armigera | AFI | = | 86.47 | % | PMID[23961115] |
| NPT3915 | Organism | Helicoverpa armigera | Helicoverpa armigera | AFI | = | 75.88 | % | PMID[23961115] |
| NPT3915 | Organism | Helicoverpa armigera | Helicoverpa armigera | AFI | = | 64.13 | % | PMID[23961115] |
| NPT3915 | Organism | Helicoverpa armigera | Helicoverpa armigera | AFI | = | 53.5 | % | PMID[23961115] |
| NPT6307 | Organism | Amphimallon majalis | Amphimallon majalis | Activity | = | 4.0 | % | PMID[21761866] |
| NPT6307 | Organism | Amphimallon majalis | Amphimallon majalis | Activity | = | 1.1 | % | PMID[22148396] |
| NPT6307 | Organism | Amphimallon majalis | Amphimallon majalis | Activity | = | 15.8 | % | PMID[21761866] |
| NPT3062 | Organism | Spodoptera eridania | Spodoptera eridania | Activity | = | 90.0 | % | PMID[15730244] |
| NPT3062 | Organism | Spodoptera eridania | Spodoptera eridania | Activity | = | 60.0 | % | PMID[21105682] |
| NPT3062 | Organism | Spodoptera eridania | Spodoptera eridania | Activity | = | 30.0 | % | PMID[21105682] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | logEC50 | = | 0.25 | n.a. | DOI[10.1021/np970167e] |
| NPT20529 | Non-molecular | NON-PROTEIN TARGET | n.a. | IC50 | = | 20.3 | ug.mL-1 | PMID[15974620] |
| NPT2747 | Organism | Achaea janata | Achaea janata | ED50 | = | 0.72 | microg/cm2 | Open TG-GATES in vivo data: Organ Weight |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | ED50 | = | 0.89 | microg/cm2 | PMID[17253840] |
| NPT450 | Organism | Meloidogyne incognita | Meloidogyne incognita | Activity | = | 21.0 | % | PMID[24930833] |
| NPT450 | Organism | Meloidogyne incognita | Meloidogyne incognita | Activity | = | 11.0 | % | PMID[12105963] |
| NPT3062 | Organism | Spodoptera eridania | Spodoptera eridania | AFI | = | 57.3 | % | PMID[12353636] |
| NPT3062 | Organism | Spodoptera eridania | Spodoptera eridania | AFI | = | 91.2 | % | PMID[12353636] |
| NPT3062 | Organism | Spodoptera eridania | Spodoptera eridania | AFI | = | 94.2 | % | PMID[12353636] |
| NPT3062 | Organism | Spodoptera eridania | Spodoptera eridania | AFI | = | 94.0 | % | PMID[12353636] |
| NPT1643 | Organism | Epilachna | Epilachna | AFI | = | 35.7 | % | PMID[12353636] |
| NPT1643 | Organism | Epilachna | Epilachna | AFI | = | 62.2 | % | PMID[12353636] |
| NPT1643 | Organism | Epilachna | Epilachna | AFI | = | 97.6 | % | PMID[12353636] |
| NPT23406 | Organism | Pieris rapae | Pieris rapae | FDI | = | 100.0 | % | DOI[10.1016/S0040-4020(02)00944-4] |
| NPT785 | Organism | Pieris brassicae | Pieris brassicae | AFI | = | 99.5 | % | DOI[10.1016/S0040-4020(03)00573-8] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | TIME | = | 235.2 | hr | PMID[16242271] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | TIME | = | 243.36 | hr | PMID[16242271] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | FDI | = | 15.62 | % | PMID[16242271] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | FDI | = | 12.59 | % | PMID[16242271] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | TIME | = | 391.2 | hr | PMID[16242271] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | TIME | = | 360.0 | hr | PMID[16242271] |
| NPT1643 | Organism | Epilachna | Epilachna | ED50 | = | 0.72 | microg/cm2 | PMID[10650082] |
| NPT5473 | Organism | Diaprepes abbreviatus | Diaprepes abbreviatus | Activity | = | 1.8 | cm2 | PMID[20329739] |
| NPT5473 | Organism | Diaprepes abbreviatus | Diaprepes abbreviatus | Activity | = | 0.74 | cm2 | PMID[20402524] |
| NPT5474 | Organism | Schistocerca americana | Schistocerca americana | Activity | = | 0.29 | cm2 | PMID[20146503] |
| NPT5474 | Organism | Schistocerca americana | Schistocerca americana | Activity | = | 0.4 | cm2 | PMID[21452899] |
| NPT846 | Organism | Cnaphalocrocis medinalis | Cnaphalocrocis medinalis | Activity | = | 12.36 | % | PMID[24487236] |
| NPT846 | Organism | Cnaphalocrocis medinalis | Cnaphalocrocis medinalis | ECI | = | 6.507 | % | DOI[10.1016/j.cropro.2005.01.009] |
| NPT846 | Organism | Cnaphalocrocis medinalis | Cnaphalocrocis medinalis | Activity | = | 52.72 | % | PMID[23252603] |
| NPT846 | Organism | Cnaphalocrocis medinalis | Cnaphalocrocis medinalis | Activity | = | 0.187 | mg/mg/day | PMID[18411318] |
| NPT846 | Organism | Cnaphalocrocis medinalis | Cnaphalocrocis medinalis | Activity | = | 0.0277 | mg/mg/day | PMID[24273638] |
| NPT846 | Organism | Cnaphalocrocis medinalis | Cnaphalocrocis medinalis | Activity | = | 0.427 | mg/mg/day | PMID[24273638] |
| NPT846 | Organism | Cnaphalocrocis medinalis | Cnaphalocrocis medinalis | FDI | = | 93.2 | % | DOI[10.1016/j.cropro.2005.01.009] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | TIME | = | 168.0 | hr | PMID[12617583] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | TIME | = | 172.8 | hr | PMID[12617583] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | Activity | = | 28.5 | % | PMID[9584394] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | Activity | = | 42.8 | % | PMID[16134928] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | Activity | = | 247.2 | mg | DrugMatrix in vivo data: Biochemistry |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | TIME | = | 264.0 | hr | PMID[12617583] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | TIME | = | 333.6 | hr | PMID[12617583] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | Activity | = | 79.2 | % | PMID[17503850] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | AFC50 | = | 9.8 | ug ml-1 | PMID[19318121] |
| NPT6385 | Organism | Rotylenchulus reniformis | Rotylenchulus reniformis | EC50 | = | 119.1 | ppm | PubChem BioAssay data set |
| NPT6385 | Organism | Rotylenchulus reniformis | Rotylenchulus reniformis | EC50 | = | 151.9 | ppm | PMID[16472241] |
| NPT6385 | Organism | Rotylenchulus reniformis | Rotylenchulus reniformis | EC50 | = | 193.9 | ppm | PMID[18710917] |
| NPT1643 | Organism | Epilachna | Epilachna | ED50 | = | 0.59 | ug | PMID[15787455] |
| NPT2747 | Organism | Achaea janata | Achaea janata | Activity | = | 98.8 | % | PMID[19487444] |
| NPT2747 | Organism | Achaea janata | Achaea janata | Activity | = | 0.0 | % | PMID[24387347] |
| NPT2747 | Organism | Achaea janata | Achaea janata | Activity | = | 696.4 | mg | PMID[9392875] |
| NPT2747 | Organism | Achaea janata | Achaea janata | TIME | = | 247.2 | hr | PMID[19969457] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | Activity | = | 62.5 | % | PMID[22934671] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | TIME | = | 223.2 | hr | PMID[11429258] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | TIME | = | 386.4 | hr | PMID[11429258] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | TIME | = | 129.6 | hr | PMID[11429258] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | TIME | = | 79.2 | hr | PMID[11429258] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | TIME | = | 98.4 | hr | PMID[11429258] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | TIME | = | 76.8 | hr | PMID[11429258] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | Activity | = | 95.4 | % | DrugMatrix in vitro pharmacology data |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | Activity | = | 94.8 | % | PMID[15497935] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | Activity | = | 91.6 | % | PMID[24463437] |
| NPT785 | Organism | Pieris brassicae | Pieris brassicae | Activity | = | 99.5 | % | PMID[18715034] |
| NPT2747 | Organism | Achaea janata | Achaea janata | Activity | = | 100.0 | % | PMID[22061825] |
| NPT2747 | Organism | Achaea janata | Achaea janata | AFI | = | 100.0 | % | PMID[19969457] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | Activity | = | 83.3 | % | PMID[20045319] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | Activity | = | 85.5 | % | PMID[26341132] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | Activity | = | 100.0 | % | PMID[16038557] |
| NPT454 | Organism | Tenebrio molitor | Tenebrio molitor | Inhibition | = | 29.57 | % | PMID[20585132] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | AFI | = | 79.41 | % | DOI[10.1016/j.jssas.2011.10.002] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | AFI | = | 70.49 | % | DOI[10.1016/j.jssas.2011.10.002] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | AFI | = | 49.67 | % | DOI[10.1016/j.jssas.2011.10.002] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | AFI | = | 61.31 | % | DOI[10.1016/j.jssas.2011.10.002] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | AFI | = | 88.02 | % | PMID[23961115] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | AFI | = | 78.66 | % | PMID[23961115] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | AFI | = | 70.08 | % | PMID[23961115] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | AFI | = | 60.12 | % | PMID[23961115] |
| NPT4388 | Organism | Tuta absoluta | Tuta absoluta | TIME | = | 0.5593 | hr | DOI[10.1016/j.cropro.2012.12.021] |
| NPT4388 | Organism | Tuta absoluta | Tuta absoluta | TIME | = | 0.6453 | hr | DOI[10.1016/j.cropro.2012.12.021] |
| NPT4388 | Organism | Tuta absoluta | Tuta absoluta | Ratio | = | 1.96 | n.a. | PMID[11575949] |
| NPT4388 | Organism | Tuta absoluta | Tuta absoluta | Ratio | = | 1.8 | n.a. | PMID[8176712] |
| NPT4388 | Organism | Tuta absoluta | Tuta absoluta | Ratio | = | 1.65 | n.a. | PMID[8176712] |
| NPT4388 | Organism | Tuta absoluta | Tuta absoluta | LC10 | = | 0.97 | mgAi/L | DOI[10.1016/j.cropro.2012.12.021] |
| NPT4388 | Organism | Tuta absoluta | Tuta absoluta | LC10 | = | 1.59 | mgAi/L | DOI[10.1016/j.cropro.2012.12.021] |
| NPT1194 | Organism | Earias vitella | Earias vitella | Activity | = | 25.0 | % | PMID[24893224] |
| NPT1194 | Organism | Earias vitella | Earias vitella | Activity | = | 37.0 | % | PMID[22301215] |
| NPT1194 | Organism | Earias vitella | Earias vitella | Activity | = | 59.2 | mg | PubChem BioAssay data set |
| NPT1194 | Organism | Earias vitella | Earias vitella | Activity | = | 79.2 | % | PMID[17503850] |
| NPT2720 | Organism | Nilaparvata lugens | Nilaparvata lugens | AFC50 | = | 7.5 | ug ml-1 | PMID[19318121] |
| NPT1403 | Organism | Felis catus | Felis catus | Reduction | = | 53.0 | % | PMID[11262075] |
| NPT1579 | Organism | Heliothis virescens | Heliothis virescens | Activity | = | 60.0 | % | PMID[18558745] |
| NPT5551 | Organism | Sogatella furcifera | Sogatella furcifera | AFC50 | = | 7.0 | ug ml-1 | PMID[19318121] |
| NPT1419 | Organism | Tribolium castaneum | Tribolium castaneum | EC50 | = | 1.0 | ppm | PMID[8377014] |
| NPT1419 | Organism | Tribolium castaneum | Tribolium castaneum | EC50 | = | 3.0 | ppm | PMID[11000019] |
| NPT26961 | Organism | Spilarctia obliqua | Spilarctia obliqua | FDI | = | 100.0 | % | PMID[15026059] |
| NPT6276 | Organism | Popillia japonica | Popillia japonica | Activity | = | 74.3 | % | PMID[21761866] |
| NPT6276 | Organism | Popillia japonica | Popillia japonica | Activity | = | 64.1 | % | PMID[22148396] |
| NPT6276 | Organism | Popillia japonica | Popillia japonica | Activity | = | 87.2 | % | PMID[19453174] |
| Target ID | Target Type | Target Name | Target Organism | Activity Type | Activity Relation | Value | Unit | Reference |
|---|---|---|---|---|---|---|---|---|
| NPT776 | Organism | Spodoptera littoralis | Spodoptera littoralis | mortality | = | 83.5 | % | DOI[10.1016/j.cropro.2010.11.022] |
| NPT1367 | Organism | Bemisia tabaci | Bemisia tabaci | mortality | = | 82.8 | % | DOI[10.1016/j.cropro.2010.11.022] |
| NPT849 | Organism | Plutella xylostella | Plutella xylostella | Survival | < | 60.0 | % | DrugMatrix in vitro pharmacology data |
| NPT849 | Organism | Plutella xylostella | Plutella xylostella | Survival | = | 50.0 | % | DrugMatrix in vitro pharmacology data |
| NPT1637 | Organism | Cydia pomonella | Cydia pomonella | mortality | = | 100.0 | % | PMID[10637057] |
| NPT1637 | Organism | Cydia pomonella | Cydia pomonella | mortality | = | 50.0 | % | PMID[10637057] |
| NPT1637 | Organism | Cydia pomonella | Cydia pomonella | mortality | = | 66.7 | % | PMID[10637057] |
| NPT3915 | Organism | Helicoverpa armigera | Helicoverpa armigera | mortality | = | 100.0 | % | PMID[23961115] |
| NPT3915 | Organism | Helicoverpa armigera | Helicoverpa armigera | mortality | = | 95.0 | % | PMID[23961115] |
| NPT3915 | Organism | Helicoverpa armigera | Helicoverpa armigera | mortality | = | 61.25 | % | PMID[23961115] |
| NPT3915 | Organism | Helicoverpa armigera | Helicoverpa armigera | mortality | = | 38.75 | % | PMID[23961115] |
| NPT2747 | Organism | Achaea janata | Achaea janata | mortality | = | 93.6 | % | PMID[19530696] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | mortality | = | 84.0 | % | PMID[19530696] |
| NPT785 | Organism | Pieris brassicae | Pieris brassicae | mortality | = | 100.0 | % | DOI[10.1016/S0040-4020(03)00573-8] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | mortality | = | 33.21 | % | PMID[16242271] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | mortality | = | 40.0 | % | PMID[16242271] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | mortality | = | 64.0 | % | PMID[16242271] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | mortality | = | 28.0 | % | DOI[10.1016/j.jssas.2011.10.002] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | mortality | = | 78.0 | % | PMID[12617583] |
| NPT2747 | Organism | Achaea janata | Achaea janata | mortality | = | 0.0 | % | PMID[19969457] |
| NPT2747 | Organism | Achaea janata | Achaea janata | mortality | = | 100.0 | % | PMID[19969457] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | mortality | = | 98.28 | % | DOI[10.1016/j.jssas.2011.10.002] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | mortality | = | 85.33 | % | DOI[10.1016/j.jssas.2011.10.002] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | mortality | = | 100.0 | % | DOI[10.1016/j.jssas.2011.10.002] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | mortality | = | 57.33 | % | DOI[10.1016/j.jssas.2011.10.002] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | mortality | = | 93.55 | % | DOI[10.1016/j.jssas.2011.10.002] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | mortality | = | 70.21 | % | DOI[10.1016/j.jssas.2011.10.002] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | mortality | = | 73.75 | % | PMID[23961115] |
| NPT1175 | Organism | Spodoptera litura | Spodoptera litura | mortality | = | 52.5 | % | PMID[23961115] |
| NPT4388 | Organism | Tuta absoluta | Tuta absoluta | Survival | < | 4.0 | % | DOI[10.1016/0960-894X(96)00418-0] |
| NPT4388 | Organism | Tuta absoluta | Tuta absoluta | Survival | = | 25.0 | % | PMID[10425118] |
| NPT530 | Organism | Caenorhabditis elegans | Caenorhabditis elegans | mortality | = | 50.0 | % | PMID[12822931] |
| NPT530 | Organism | Caenorhabditis elegans | Caenorhabditis elegans | mortality | = | 56.0 | % | PMID[12822931] |
| NPT176 | Organism | Artemia salina | Artemia salina | mortality | = | 12.5 | % | PMID[23734701] |
| NPT176 | Organism | Artemia salina | Artemia salina | mortality | = | 59.6 | % | PMID[23734701] |
| NPT176 | Organism | Artemia salina | Artemia salina | mortality | = | 81.7 | % | PMID[23734701] |
| NPT26957 | Organism | Macrosteles quadripunctulatus | Macrosteles quadripunctulatus | mortality | = | 30.0 | % | DOI[10.1016/j.cropro.2010.11.022] |
| NPT4696 | Organism | Brontispa longissima | Brontispa longissima | mortality | = | 63.33 | % | DOI[10.1584/jpestics.G10-52] |
| NPT4696 | Organism | Brontispa longissima | Brontispa longissima | mortality | = | 56.67 | % | DOI[10.1584/jpestics.G10-52] |
| NPT4696 | Organism | Brontispa longissima | Brontispa longissima | mortality | = | 46.67 | % | DOI[10.1584/jpestics.G10-52] |
| NPT4696 | Organism | Brontispa longissima | Brontispa longissima | mortality | = | 20.0 | % | DOI[10.1584/jpestics.G10-52] |
| NPT4696 | Organism | Brontispa longissima | Brontispa longissima | mortality | = | 10.0 | % | DOI[10.1584/jpestics.G10-52] |
| NPT4696 | Organism | Brontispa longissima | Brontispa longissima | mortality | = | 3.33 | % | DOI[10.1584/jpestics.G10-52] |
Experimental ADME
| Experiment Model | Experiment Tissue | ADME Type | ADME Relation | ADME Value | ADME Unit | Reference |
|---|
Experimental Toxicity
| Experiment Model | Experiment Organism | Toxicity Type | Toxicity Relation | Toxicity Value | Toxicity Unit | Reference |
|---|---|---|---|---|---|---|
| - | Spodoptera litura | LC50 | = | 127.5 | ppm | PMID[19226154] |
| - | Spodoptera litura | LC50 | = | 133.89 | ppm | PMID[16723227] |
| - | Spodoptera litura | LC50 | = | 118.8 | ppm | PMID[17004718] |
| - | Spodoptera litura | LC50 | = | 18.89 | microg/cm2 | PMID[25238284] |
| - | Spodoptera litura | LC90 | = | 3278.46 | ppm | PMID[16723227] |
| - | Spodoptera litura | LC90 | = | 412.78 | ppm | PMID[11931626] |
| - | Epilachna | LD50 | = | 1.24 | microg/cm2 | PMID[17402783] |
| - | Epilachna | LT50 | = | 86.98 | hr | PMID[12517097] |
| - | Epilachna | LT50 | = | 115.06 | hr | PMID[12517097] |
| - | Epilachna | LT50 | = | 146.04 | hr | PMID[12517097] |
| - | Epilachna | LT50 | = | 151.91 | hr | PMID[12517097] |
| - | Achaea janata | LD50 | = | 0.67 | microg/cm2 | PMID[8277312] |
| - | Achaea janata | LC50 | = | 21.3 | microg/cm2 | PMID[20038128] |
| - | Rattus norvegicus | LD50 | > | 3540.0 | mg.kg-1 | PMID[18443122] |
| - | Helicoverpa armigera | LC50 | = | 186.16 | ppm | PMID[22647719] |
| - | Tuta absoluta | LC50 | = | 10.09 | mgAi/L | DOI[10.1016/0960-894X(96)00418-0] |
| - | Tuta absoluta | LC50 | = | 5.62 | mgAi/L | PMID[8176712] |
| - | Tuta absoluta | LC90 | = | 64.06 | mgAi/L | PMID[8176712] |
| - | Tuta absoluta | LC90 | = | 32.71 | mgAi/L | PMID[8176712] |
| - | Spodoptera littoralis | LC50 | = | 8.2 | ppm | PMID[25856683] |
| - | Spodoptera littoralis | LC50 | = | 0.04 | ppm | PMID[15165132] |
| - | Spodoptera littoralis | LC50 | = | 6.1 | ug/g | PMID[25700232] |
| - | Plutella xylostella | LD50 | = | 0.87 | mg.kg-1 | PMID[17438052] |
| - | Plutella xylostella | LD50 | = | 1.28 | mg.kg-1 | PMID[17403996] |
| - | Plutella xylostella | LD50 | = | 4.12 | mg.kg-1 | PMID[17438052] |
| - | Plutella xylostella | LD50 | = | 7.04 | mg.kg-1 | PMID[17438052] |
Common Abbreviations:
LC: Lethal Concentration; LD: Lethal Dose; LT:Lethal Time; NOAEL: No-observed-adverse-effect Level; BMDL: Benchmark Dose Lower Confidence Limit; BMD: Benchmark Dose; BMC:Benchmark Concentration; LOAEL: Lowest Observed Adverse Effect Level; RfD:Reference Dose; RfC:Reference Concentration; MRL: Minimal Risk Level; MEG: Maximum Exposure Guideline; PAC: Protective Action Criteria
| Hepatotoxicity | Carcinogenicity | Mutagenicity | Cardiotoxicity | Respiratory Toxicity | Eye Irritation | Endocrine Disruption |
|---|---|---|---|---|---|---|
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Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP toxicity records from domain-specific databases. These databases include:
☉ ToxValDB: a curated database that compiles quantitative toxicity values for chemicals from diverse public sources to support toxicological research and risk assessment.
☉ TOXRIC: a comprehensive, free-to-access, online database providing toxicological/feature data. The toxicity labels are retrieved from this database. [PMID: 36400569]
  Chemically structural similarityTop-200 similar NPs were calculated against the active-NP-set (includes approximately 50,000 NPs with experimentally-derived bioactivity available in NPASS)
Similarity is measured using the Tanimoto coefficient (Tc) , which compares the binary fingerprints of two molecules. Tc is calculated as the intersection divided by the union of '1' bits in the fingerprints, ranging from 0 to 1, with 1 indicating highest similarity.
●  The left chart: Distribution of similarity level between NPC475462 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.5 or Top200).
| Similarity Score | Similarity Level | Natural Product ID |
|---|---|---|
| 1.0 | High Similarity | NPC16729 |
| 1.0 | High Similarity | NPC120958 |
| 0.8 | Intermediate Similarity | NPC48813 |
| 0.7812 | Intermediate Similarity | NPC48414 |
| 0.7732 | Intermediate Similarity | NPC5153 |
| 0.7263 | Intermediate Similarity | NPC256618 |
| 0.7071 | Intermediate Similarity | NPC219058 |
| 0.6832 | Remote Similarity | NPC42206 |
| 0.6731 | Remote Similarity | NPC471172 |
| 0.6569 | Remote Similarity | NPC194854 |
| 0.619 | Remote Similarity | NPC601017 |
| 0.619 | Remote Similarity | NPC601069 |
| 0.619 | Remote Similarity | NPC608590 |
| 0.5192 | Remote Similarity | NPC475376 |
Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.
●  The left chart: Distribution of similarity level between NPC475462 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.5 or Top200).
| Similarity Score | Similarity Level | Drug ID | Developmental Stage |
|---|---|---|---|
| NPD |
  Bioactivity similaritySimilarity level is defined by Bioactivity similarity was calculated based on bioactivity descriptors of compounds. The bioactivity descriptors were calculated by a recently developed AI algorithm Chemical Checker (CC) [Nature Biotechnology, 38:1087–1096, 2020; Nature Communications, 12:3932, 2021], which evaluated bioactivity similarities at five levels:
☉ A: chemistry similarity;
☉ B: biological targets similarity;
☉ C: networks similarity;
☉ D: cell-based bioactivity similarity;
☉ E: similarity based on clinical data.
Those 5 categories of CC bioactivity descriptors were calculated and then subjected to manifold projection using UMAP algorithm, to project all NPs on a 2-Dimensional space. The current NP was highlighted with a small circle in the 2-D map. Below figures: left-to-right, A-to-E.
