NPASS Compound

Natural Product: NPC469748

Natural Product ID	NPC469748
Common Name ? The InCHIKey will be temporarily assigned as the "Common Name" if no IUPAC name or alternative short name is available.	Triptonine B
IUPAC Name	n.a.
Synonyms	Triptonine B
Synthetic Gene Cluster	n.a.
ChEMBL Identifier	CHEMBL1169612
PubChem CID	49798766
Chemical Classification	CHEMONTID:0000000 [Organic compounds] [CHEMONTID:0000012] Lipids and lipid-like molecules [CHEMONTID:0000259] Prenol lipids [CHEMONTID:0001283] Terpene lactones

The Chemical Classification was calculated by Classyfire, a software for chemical taxonomy calculation. Reference: DOI:10.1186/s13321-016-0174-y.

Chemical Representations

RDKit 3D 120125 0 0 0 0 0 0 0 0999 V2000 -4.5711 -4.4734 -2.5778 C 0 0 0 0 0 0 0 0 0 0 0 0 -4.5642 -3.0276 -2.2447 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.4756 -2.9000 -0.9385 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.5002 -1.4476 -0.5426 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.8543 -1.0937 0.8254 C 0 0 0 0 0 0 0 0 0 0 0 0 -6.3692 -1.8150 1.6025 O 0 0 0 0 0 0 0 0 0 0 0 0 -5.5097 0.3699 1.3269 C 0 0 0 0 0 0 0 0 0 0 0 0 -4.1759 0.5370 0.6582 C 0 0 0 0 0 0 0 0 0 0 0 0 -4.1365 1.3247 -0.2629 O 0 0 0 0 0 0 0 0 0 0 0 0 -3.0193 -0.1140 0.9368 O 0 0 0 0 0 0 0 0 0 0 0 0 -1.8509 -0.1782 0.3150 C 0 0 0 0 0 0 0 0 0 0 0 0 -0.6414 0.3660 -0.2630 C 0 0 0 0 0 0 0 0 0 0 0 0 -0.9366 0.0428 -1.7889 C 0 0 0 0 0 0 0 0 0 0 0 0 -0.9794 -1.5299 -1.7751 C 0 0 0 0 0 0 0 0 0 0 0 0 0.3588 -2.0785 -1.9116 C 0 0 0 0 0 0 0 0 0 0 0 0 1.2798 -0.8585 -1.4673 C 0 0 0 0 0 0 0 0 0 0 0 0 0.6068 -0.5394 -0.2166 C 0 0 0 0 0 0 0 0 0 0 0 0 1.5852 0.0228 0.7839 C 0 0 0 0 0 0 0 0 0 0 0 0 1.9876 1.5004 0.4246 C 0 0 0 0 0 0 0 0 0 0 0 0 0.8476 2.2732 0.7252 C 0 0 0 0 0 0 0 0 0 0 0 0 -0.4143 1.7955 -0.0084 C 0 0 0 0 0 0 0 0 0 0 0 0 -0.7080 2.6606 -1.1024 O 0 0 0 0 0 0 0 0 0 0 0 0 -1.6477 3.6420 -1.1289 C 0 0 0 0 0 0 0 0 0 0 0 0 -2.2891 3.7703 -0.0813 O 0 0 0 0 0 0 0 0 0 0 0 0 -1.8734 4.4833 -2.3267 C 0 0 0 0 0 0 0 0 0 0 0 0 1.0507 3.6362 0.3015 O 0 0 0 0 0 0 0 0 0 0 0 0 1.0468 4.7025 1.1776 C 0 0 0 0 0 0 0 0 0 0 0 0 0.8536 4.4515 2.4114 O 0 0 0 0 0 0 0 0 0 0 0 0 1.2552 6.0915 0.7357 C 0 0 0 0 0 0 0 0 0 0 0 0 3.3139 1.5493 0.5111 O 0 0 0 0 0 0 0 0 0 0 0 0 4.1670 1.0816 1.4703 C 0 0 0 0 0 0 0 0 0 0 0 0 3.6540 0.6141 2.4884 O 0 0 0 0 0 0 0 0 0 0 0 0 5.6551 1.0777 1.3338 C 0 0 0 0 0 0 0 0 0 0 0 0 6.0975 -0.3257 0.8951 C 0 0 0 0 0 0 0 0 0 0 0 0 5.8146 -1.4219 1.8408 C 0 0 0 0 0 0 0 0 0 0 0 0 5.1526 -2.5696 1.7238 C 0 0 0 0 0 0 0 0 0 0 0 0 5.1178 -3.4759 2.8004 C 0 0 0 0 0 0 0 0 0 0 0 0 5.7224 -3.2286 3.9437 N 0 0 0 0 0 0 0 0 0 0 0 0 6.4031 -2.0941 4.1318 C 0 0 0 0 0 0 0 0 0 0 0 0 6.4418 -1.2113 3.0882 C 0 0 0 0 0 0 0 0 0 0 0 0 4.3479 -3.1415 0.6074 C 0 0 0 0 0 0 0 0 0 0 0 0 4.9831 -3.8987 -0.1143 O 0 0 0 0 0 0 0 0 0 0 0 0 3.0551 -2.8972 0.3609 O 0 0 0 0 0 0 0 0 0 0 0 0 2.1799 -3.3195 -0.6089 C 0 0 0 0 0 0 0 0 0 0 0 0 0.7987 -2.8105 -0.5998 C 0 0 0 0 0 0 0 0 0 0 0 0 0.3858 -1.8363 0.2866 O 0 0 0 0 0 0 0 0 0 0 0 0 -0.0963 -4.0117 -0.3850 C 0 0 0 0 0 0 0 0 0 0 0 0 7.5750 -0.2072 0.5793 C 0 0 0 0 0 0 0 0 0 0 0 0 6.0789 1.9046 0.3074 O 0 0 0 0 0 0 0 0 0 0 0 0 1.1005 -0.1616 2.1481 C 0 0 0 0 0 0 0 0 0 0 0 0 2.8033 -0.5369 0.5484 O 0 0 0 0 0 0 0 0 0 0 0 0 1.6546 -0.0854 -2.4738 O 0 0 0 0 0 0 0 0 0 0 0 0 2.8435 0.0116 -3.1308 C 0 0 0 0 0 0 0 0 0 0 0 0 3.7863 -0.7141 -2.7965 O 0 0 0 0 0 0 0 0 0 0 0 0 3.0424 0.9714 -4.2463 C 0 0 0 0 0 0 0 0 0 0 0 0 -2.1687 -1.9179 -2.4160 O 0 0 0 0 0 0 0 0 0 0 0 0 -3.2237 -2.6118 -1.8509 C 0 0 0 0 0 0 0 0 0 0 0 0 -3.0061 -2.9954 -0.6234 O 0 0 0 0 0 0 0 0 0 0 0 0 -2.2254 0.4110 -2.1730 O 0 0 0 0 0 0 0 0 0 0 0 0 -2.5213 1.2062 -3.2954 C 0 0 0 0 0 0 0 0 0 0 0 0 -1.5111 1.5797 -3.9578 O 0 0 0 0 0 0 0 0 0 0 0 0 -3.9064 1.5689 -3.6609 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.4845 0.4134 2.7926 C 0 0 0 0 0 0 0 0 0 0 0 0 -5.1648 1.7789 3.2494 C 0 0 0 0 0 0 0 0 0 0 0 0 -4.9591 2.6775 2.4066 O 0 0 0 0 0 0 0 0 0 0 0 0 -5.0894 2.0808 4.5935 O 0 0 0 0 0 0 0 0 0 0 0 0 -4.7865 3.3760 5.0625 C 0 0 0 0 0 0 0 0 0 0 0 0 -4.4832 -5.1342 -1.6762 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.7779 -4.7449 -3.3057 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.5868 -4.7247 -2.9969 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.0339 -2.4745 -3.0482 H 0 0 0 0 0 0 0 0 0 0 0 0 -6.4551 -3.3108 -1.1407 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.9036 -3.4586 -0.1798 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.5589 -1.0279 -0.9240 H 0 0 0 0 0 0 0 0 0 0 0 0 -6.3095 -0.9711 -1.2304 H 0 0 0 0 0 0 0 0 0 0 0 0 -6.2417 0.9904 0.8542 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.4131 -0.6189 -0.6943 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.4769 -1.2470 0.7038 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.2967 0.4761 -2.4720 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.2160 -1.8757 -0.7192 H 0 0 0 0 0 0 0 0 0 0 0 0 0.7144 -2.5360 -2.7970 H 0 0 0 0 0 0 0 0 0 0 0 0 2.2432 -1.4119 -1.2084 H 0 0 0 0 0 0 0 0 0 0 0 0 1.8937 1.3492 -0.7765 H 0 0 0 0 0 0 0 0 0 0 0 0 0.7099 2.3746 1.8130 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.1791 2.1314 0.7328 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.1443 4.2015 -3.1104 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.8854 4.3402 -2.7644 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.7674 5.5515 -2.0177 H 0 0 0 0 0 0 0 0 0 0 0 0 2.0717 6.1899 -0.0067 H 0 0 0 0 0 0 0 0 0 0 0 0 0.3542 6.5428 0.2747 H 0 0 0 0 0 0 0 0 0 0 0 0 1.4768 6.7302 1.6372 H 0 0 0 0 0 0 0 0 0 0 0 0 6.1112 1.3169 2.2628 H 0 0 0 0 0 0 0 0 0 0 0 0 5.6037 -0.5401 -0.0665 H 0 0 0 0 0 0 0 0 0 0 0 0 4.5611 -4.4175 2.6008 H 0 0 0 0 0 0 0 0 0 0 0 0 6.8770 -1.9453 5.0887 H 0 0 0 0 0 0 0 0 0 0 0 0 7.0094 -0.2745 3.2570 H 0 0 0 0 0 0 0 0 0 0 0 0 2.6527 -3.3197 -1.6527 H 0 0 0 0 0 0 0 0 0 0 0 0 2.1733 -4.4578 -0.4663 H 0 0 0 0 0 0 0 0 0 0 0 0 0.4898 -4.9657 -0.2207 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.7108 -3.9279 0.5302 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.6465 -4.1930 -1.3135 H 0 0 0 0 0 0 0 0 0 0 0 0 8.1132 0.2231 1.4465 H 0 0 0 0 0 0 0 0 0 0 0 0 8.0181 -1.1563 0.2563 H 0 0 0 0 0 0 0 0 0 0 0 0 7.6666 0.5028 -0.2550 H 0 0 0 0 0 0 0 0 0 0 0 0 6.5284 2.7358 0.6490 H 0 0 0 0 0 0 0 0 0 0 0 0 1.5524 -1.0580 2.6837 H 0 0 0 0 0 0 0 0 0 0 0 0 1.0712 0.7325 2.8210 H 0 0 0 0 0 0 0 0 0 0 0 0 0.0100 -0.4628 2.1380 H 0 0 0 0 0 0 0 0 0 0 0 0 3.2955 -0.2184 -0.2162 H 0 0 0 0 0 0 0 0 0 0 0 0 2.2061 1.6513 -4.3968 H 0 0 0 0 0 0 0 0 0 0 0 0 3.2219 0.3769 -5.1778 H 0 0 0 0 0 0 0 0 0 0 0 0 4.0133 1.4928 -4.0485 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.3280 2.2252 -2.8530 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.5194 0.6643 -3.8308 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.8395 2.1403 -4.6194 H 0 0 0 0 0 0 0 0 0 0 0 0 -6.4597 0.1399 3.2671 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.6633 -0.2509 3.1861 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.6785 4.0178 4.9645 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.9835 3.8639 4.4770 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.4669 3.3183 6.1157 H 0 0 0 0 0 0 0 0 0 0 0 0 1 2 1 0 2 3 1 0 3 4 1 0 4 5 1 0 5 6 2 0 5 7 1 0 7 8 1 0 8 9 2 0 8 10 1 0 10 11 1 0 11 12 1 0 12 13 1 0 13 14 1 0 14 15 1 0 15 16 1 0 16 17 1 0 17 18 1 0 18 19 1 0 19 20 1 0 20 21 1 0 21 22 1 0 22 23 1 0 23 24 2 0 23 25 1 0 20 26 1 0 26 27 1 0 27 28 2 0 27 29 1 0 19 30 1 0 30 31 1 0 31 32 2 0 31 33 1 0 33 34 1 0 34 35 1 0 35 36 2 0 36 37 1 0 37 38 2 0 38 39 1 0 39 40 2 0 36 41 1 0 41 42 2 0 41 43 1 0 43 44 1 0 44 45 1 0 45 46 1 0 45 47 1 0 34 48 1 0 33 49 1 0 18 50 1 0 18 51 1 0 16 52 1 0 52 53 1 0 53 54 2 0 53 55 1 0 14 56 1 0 56 57 1 0 57 58 2 0 13 59 1 0 59 60 1 0 60 61 2 0 60 62 1 0 7 63 1 0 63 64 1 0 64 65 2 0 64 66 1 0 66 67 1 0 57 2 1 0 17 12 1 0 21 12 1 0 45 15 1 0 46 17 1 0 40 35 1 0 1 68 1 0 1 69 1 0 1 70 1 0 2 71 1 0 3 72 1 0 3 73 1 0 4 74 1 0 4 75 1 0 7 76 1 0 11 77 1 0 11 78 1 0 13 79 1 0 14 80 1 0 15 81 1 0 16 82 1 0 19 83 1 0 20 84 1 0 21 85 1 0 25 86 1 0 25 87 1 0 25 88 1 0 29 89 1 0 29 90 1 0 29 91 1 0 33 92 1 0 34 93 1 0 37 94 1 0 39 95 1 0 40 96 1 0 44 97 1 0 44 98 1 0 47 99 1 0 47100 1 0 47101 1 0 48102 1 0 48103 1 0 48104 1 0 49105 1 0 50106 1 0 50107 1 0 50108 1 0 51109 1 0 55110 1 0 55111 1 0 55112 1 0 62113 1 0 62114 1 0 62115 1 0 63116 1 0 63117 1 0 67118 1 0 67119 1 0 67120 1 0 M END

Standard InCHIKey	CSJIHBJWGQPLPI-LUBZDXBGSA-N
Standard InCHI	InChI=1S/C44H53NO22/c1-18-10-11-27(50)25(14-28(51)58-9)38(54)60-17-43-35(63-22(5)48)31(65-37(18)53)29-33(62-21(4)47)44(43)42(8,57)34(32(61-20(3)46)36(43)64-23(6)49)66-40(56)30(52)19(2)24-12-13-45-15-26(24)39(55)59-16-41(29,7)67-44/h12-13,15,18-19,25,29-36,52,57H,10-11,14,16-17H2,1-9H3/t18-,19+,25+,29+,30+,31+,32-,33+,34-,35+,36-,41-,42-,43+,44-/m0/s1
SMILES	CC1CCC(=O)C(C(=O)OCC23C(C(C4C(C25C(C(C(C3OC(=O)C)OC(=O)C)OC(=O)C(C(C6=C(C=NC=C6)C(=O)OCC4(O5)C)C)O)(C)O)OC(=O)C)OC1=O)OC(=O)C)CC(=O)OC

Calculated Properties

Physi-Chem Properties

Molecular Weight:	947.31	Volume:	888.349 ? Van der Waals volume.
Dense:	1.066	LogP:	-0.199 ? The logarithm of the n-octanol/water distribution coefficients.
logD7.4:	0.493 ? The logarithm of the n-octanol/water distribution coefficient at pH=7.4.	LogS:	-2.292 ? The logarithm of aqueous solubility value.
Rotatable Bonds:	11.0	Rigid Bonds:	50.0
TPSA:	316.35 ? Topological Polar Surface Area.	H-Bond Acceptor:	23.0
H-Bond Donor:	2.0	Rings:	6.0
Heavy Atoms:	23.0

MedChem Properties

QED Drug-Likeness Score:	0.214	GASA:	1.0 ? GASA represents the probability of being difficult to synthesize, ranging from 0 to 1.
Synthetic Accessibility Score:	7.681	Fsp³:	0.659
MCE-18:	239.589 ? MCE-18 stands for medicinal chemistry evolution.MCE-18≥45 is considered a suitable value.	Lipinski Rule-of-5:	Accepted
Pfizer Rule:	Rejected	GSK Rule:	Accepted
Golden Triangle Rule:	Accepted	BMS Rule:	0
Chelating Alert:	0	PAINS Alert:	0
Colloidal aggregators:	0.05	Fluc inhibitor:	0.0 ? The fluc inhibitor value is the probability of being fLuc inhibitors, within the range of 0 to 1.
Blue fluorescence:	0.01 ? The blue fluorescence value is the probability of being blue fluorescence, within the range of 0 to 1	Green fluorescence:	0.134 ? The green fluorescence value is the probability of being green fluorescence, within the range of 0 to 1
Reactive compounds:	0.009	Promiscuous compounds:	0.001

ADMET Properties (ADMETlab3.0)

ADMET: Absorption

Caco-2 Permeability:	-5.391	MDCK Permeability:	-4.985
Pgp-inhibitor:	0.001	Pgp-substrate:	0.653
PAMPA:	1.0 ? The experimental data for Peff was logarithmically transformed (logPeff). Molecules with log Peff values below 2.0 were classified as low-permeability (Category 0), while those with log Peff values exceeding 2.5 were classified as high-permeability (Category 1).	Human Intestinal Absorption (HIA):	0.001
20% Bioavailability (F20%):	0.004	30% Bioavailability (F30%):	0.029
50% Bioavailability (F50%):	0.642

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB):	0.0	MRP1:	1.0
Plasma Protein Binding (PPB):	26.599%	Volume Distribution (VD):	-0.396
Fu:	68.985% ? The fraction unbound in plasms.	OATP1B1 inhibitor:	0.005
OATP1B3 inhibitor:	0.82	BCRP inhibitor:	0.0
BSEP inhibitor:	0.957

ADMET: Metabolism

CYP1A2-inhibitor:	0.0	CYP1A2-substrate:	0.0
CYP2C19-inhibitor:	0.0	CYP2C19-substrate:	0.0
CYP2C9-inhibitor:	0.0	CYP2C9-substrate:	0.0
CYP2D6-inhibitor:	0.0	CYP2D6-substrate:	0.001
CYP3A4-inhibitor:	0.763	CYP3A4-substrate:	0.0
CYP2B6-substrate:	0.0	CYP2C8-inhibitor:	0.829
HLM stability:	0.967 ? Human liver microsomal (HLM) stability. Category 0: stable+ (HLM > 30 min); Category 1: unstable- (HLM ≤ 30 min). The output value is the probability of human liver microsomal instability, where a value closer to 1 indicates a higher likelihood of instability.

ADMET: Excretion

Clearance (CL):

0.783

Half-life (T1/2):

2.248

ADMET: Toxicity

hERG Blockers:	0.001	hERG Blockers (10um):	0.055
Human Hepatotoxicity (H-HT):	0.723	Drug-induced Liver Injury (DILI):	0.998
AMES Toxicity:	0.541	Rat Oral Acute Toxicity:	0.379
Maximum Recommended Daily Dose:	0.605	Skin Sensitization:	1.0
Carcinogencity:	0.791	Eye Corrosion:	0.0
Eye Irritation:	0.0	Respiratory Toxicity:	0.0
Drug-induced Neurotoxicity:	0.75	Ototoxicity:	0.979
Hematotoxicity:	0.644	Drug-induced Nephrotoxicity:	0.996
Genotoxicity:	1.0	RPMI-8226 Immunitoxicity:	0.082
A549 Cytotoxicity:	0.019	Hek293 Cytotoxicity:	0.034
BCF:	0.434 ? Bioconcentration factors are used for considering secondary poisoning potential and assessing risks to human health via the food chain. The unit is -log10[(mg/L)/(1000*MW)].	IGC50:	3.094 ? 48 hour Tetrahymena pyriformis IGC50. The unit of IGC50 is -log10[(mg/L)/(1000*MW)].
LC50DM:	5.514 ? 48 hour Daphnia magna LC50. The unit of LC50DM is -log10[(mg/L)/(1000*MW)].	LC50FM:	4.56 ? 96 hour fathead minnow LC50. The unit of LC50FM is -log10[(mg/L)/(1000*MW)].

Species Source

Organism ID	Organism Name	Taxonomy Level	Family	SuperKingdom	Isolation Part	Collection Location	Collection Time	Reference
NPO13661	Tripterygium wilfordii	Species	Celastraceae	Eukaryota	n.a.	n.a.	n.a.	DOI[10.1016/0031-9422(90)85349-K]
NPO1152	Tripterygium hypoglaucum	Species	Celastraceae	Eukaryota	n.a.	root	n.a.	DOI[10.1016/S0040-4039(99)00339-1]
NPO13661	Tripterygium wilfordii	Species	Celastraceae	Eukaryota	n.a.	root	n.a.	DOI[10.1186/1471-2202-6-1]
NPO13661	Tripterygium wilfordii	Species	Celastraceae	Eukaryota	n.a.	n.a.	n.a.	PMID[10579865]
NPO13661	Tripterygium wilfordii	Species	Celastraceae	Eukaryota	n.a.	leaf	n.a.	PMID[10716597]
NPO1152	Tripterygium hypoglaucum	Species	Celastraceae	Eukaryota	n.a.	root	n.a.	PMID[10746886]
NPO1152	Tripterygium hypoglaucum	Species	Celastraceae	Eukaryota	n.a.	root	n.a.	PMID[10757718]
NPO1152	Tripterygium hypoglaucum	Species	Celastraceae	Eukaryota	n.a.	n.a.	n.a.	PMID[10757718]
NPO13661	Tripterygium wilfordii	Species	Celastraceae	Eukaryota	n.a.	n.a.	n.a.	PMID[10757718]
NPO1152	Tripterygium hypoglaucum	Species	Celastraceae	Eukaryota	root bark	Kunming, Yunnan, China	n.a.	PMID[10757718]
NPO13661	Tripterygium wilfordii	Species	Celastraceae	Eukaryota	n.a.	n.a.	n.a.	PMID[11374948]
NPO13661	Tripterygium wilfordii	Species	Celastraceae	Eukaryota	n.a.	n.a.	n.a.	PMID[11561442]
NPO13661	Tripterygium wilfordii	Species	Celastraceae	Eukaryota	n.a.	n.a.	n.a.	PMID[12579877]
NPO13661	Tripterygium wilfordii	Species	Celastraceae	Eukaryota	n.a.	n.a.	n.a.	PMID[1375626]
NPO13661	Tripterygium wilfordii	Species	Celastraceae	Eukaryota	n.a.	root	n.a.	PMID[1375626]
NPO13661	Tripterygium wilfordii	Species	Celastraceae	Eukaryota	n.a.	root	n.a.	PMID[1602302]
NPO13661	Tripterygium wilfordii	Species	Celastraceae	Eukaryota	n.a.	n.a.	n.a.	PMID[1602302]
NPO13661	Tripterygium wilfordii	Species	Celastraceae	Eukaryota	n.a.	root	n.a.	PMID[16864458]
NPO13661	Tripterygium wilfordii	Species	Celastraceae	Eukaryota	roots	n.a.	n.a.	PMID[16989518]
NPO13661	Tripterygium wilfordii	Species	Celastraceae	Eukaryota	n.a.	root	n.a.	PMID[17250858]
NPO13661	Tripterygium wilfordii	Species	Celastraceae	Eukaryota	n.a.	n.a.	n.a.	PMID[17265278]
NPO13661	Tripterygium wilfordii	Species	Celastraceae	Eukaryota	n.a.	root	n.a.	PMID[1823717]
NPO13661	Tripterygium wilfordii	Species	Celastraceae	Eukaryota	n.a.	leaf	n.a.	PMID[1823717]
NPO13661	Tripterygium wilfordii	Species	Celastraceae	Eukaryota	n.a.	n.a.	n.a.	PMID[18554602]
NPO13661	Tripterygium wilfordii	Species	Celastraceae	Eukaryota	n.a.	bark	n.a.	PMID[18996177]
NPO13661	Tripterygium wilfordii	Species	Celastraceae	Eukaryota	root	n.a.	n.a.	PMID[21486005]
NPO13661	Tripterygium wilfordii	Species	Celastraceae	Eukaryota	n.a.	root	n.a.	PMID[21486005]
NPO13661	Tripterygium wilfordii	Species	Celastraceae	Eukaryota	n.a.	n.a.	n.a.	PMID[21514608]
NPO13661	Tripterygium wilfordii	Species	Celastraceae	Eukaryota	dried roots	purchased from Sichuan Neautus Traditional Chinese Medicine Co. Ltd. (Chengdu, P.R. China)	n.a.	PMID[22148431]
NPO1152	Tripterygium hypoglaucum	Species	Celastraceae	Eukaryota	n.a.	root	n.a.	PMID[22256754]
NPO1152	Tripterygium hypoglaucum	Species	Celastraceae	Eukaryota	n.a.	n.a.	n.a.	PMID[22256754]
NPO1152	Tripterygium hypoglaucum	Species	Celastraceae	Eukaryota	n.a.	root	n.a.	PMID[23252270]
NPO13661	Tripterygium wilfordii	Species	Celastraceae	Eukaryota	leaves	n.a.	n.a.	PMID[23268606]
NPO13661	Tripterygium wilfordii	Species	Celastraceae	Eukaryota	n.a.	n.a.	n.a.	PMID[23852638]
NPO13661	Tripterygium wilfordii	Species	Celastraceae	Eukaryota	n.a.	n.a.	n.a.	PMID[24549173]
NPO13661	Tripterygium wilfordii	Species	Celastraceae	Eukaryota	n.a.	n.a.	n.a.	PMID[24963543]
NPO13661	Tripterygium wilfordii	Species	Celastraceae	Eukaryota	n.a.	n.a.	n.a.	PMID[25237706]
NPO13661	Tripterygium wilfordii	Species	Celastraceae	Eukaryota	n.a.	bark	n.a.	PMID[2534610]
NPO1152	Tripterygium hypoglaucum	Species	Celastraceae	Eukaryota	n.a.	n.a.	n.a.	PMID[2534610]
NPO13661	Tripterygium wilfordii	Species	Celastraceae	Eukaryota	n.a.	root	n.a.	PMID[2816380]
NPO13661	Tripterygium wilfordii	Species	Celastraceae	Eukaryota	Leaves	n.a.	n.a.	PMID[29355322]
NPO13661	Tripterygium wilfordii	Species	Celastraceae	Eukaryota	Leaves	n.a.	n.a.	PMID[31556299]
NPO1152	Tripterygium hypoglaucum	Species	Celastraceae	Eukaryota	n.a.	n.a.	n.a.	Europe PMC[535601]
NPO13661	Tripterygium wilfordii	Species	Celastraceae	Eukaryota	n.a.	n.a.	n.a.	PMID[7102323]
NPO13661	Tripterygium wilfordii	Species	Celastraceae	Eukaryota	n.a.	n.a.	n.a.	PMID[7304185]
NPO1152	Tripterygium hypoglaucum	Species	Celastraceae	Eukaryota	n.a.	n.a.	n.a.	PMID[8328267]
NPO13661	Tripterygium wilfordii	Species	Celastraceae	Eukaryota	n.a.	n.a.	n.a.	PMID[8699928]
NPO13661	Tripterygium wilfordii	Species	Celastraceae	Eukaryota	n.a.	n.a.	n.a.	PMID[8722541]
NPO13661	Tripterygium wilfordii	Species	Celastraceae	Eukaryota	n.a.	root	n.a.	Database[Article]
NPO1152	Tripterygium hypoglaucum	Species	Celastraceae	Eukaryota	n.a.	root	n.a.	Database[Article]
NPO1152	Tripterygium hypoglaucum	Species	Celastraceae	Eukaryota	n.a.	leaf	n.a.	Database[Article]
NPO1152	Tripterygium hypoglaucum	Species	Celastraceae	Eukaryota	n.a.	n.a.	n.a.	Database[Article]
NPO13661	Tripterygium wilfordii	Species	Celastraceae	Eukaryota	n.a.	n.a.	n.a.	Database[Article]
NPO1152	Tripterygium hypoglaucum	Species	Celastraceae	Eukaryota	n.a.	n.a.	n.a.	Database[COCONUT]
NPO13661	Tripterygium wilfordii	Species	Celastraceae	Eukaryota	n.a.	n.a.	n.a.	Database[COCONUT]
NPO1152	Tripterygium hypoglaucum	Species	Celastraceae	Eukaryota	n.a.	n.a.	n.a.	Database[HerDing]
NPO13661	Tripterygium wilfordii	Species	Celastraceae	Eukaryota	n.a.	n.a.	n.a.	Database[HerDing]
NPO1152	Tripterygium hypoglaucum	Species	Celastraceae	Eukaryota	n.a.	n.a.	n.a.	PMID[Phytochemistry, 2000, 53, 715-722.]
NPO13661	Tripterygium wilfordii	Species	Celastraceae	Eukaryota	n.a.	n.a.	n.a.	Database[TCMID]
NPO1152	Tripterygium hypoglaucum	Species	Celastraceae	Eukaryota	n.a.	n.a.	n.a.	Database[TCMID]
NPO1152	Tripterygium hypoglaucum	Species	Celastraceae	Eukaryota	n.a.	n.a.	n.a.	Database[TCM_Taiwan]
NPO1152	Tripterygium hypoglaucum	Species	Celastraceae	Eukaryota	root bark	Kunming, Yunnan, China	n.a.	Database[Title]
NPO1152	Tripterygium hypoglaucum	Species	Celastraceae	Eukaryota	root bark	n.a.	n.a.	Database[Title]
NPO1152	Tripterygium hypoglaucum	Species	Celastraceae	Eukaryota	n.a.	n.a.	n.a.	Database[Title]
NPO13661	Tripterygium wilfordii	Species	Celastraceae	Eukaryota	n.a.	n.a.	n.a.	Database[UNPD]
NPO1152	Tripterygium hypoglaucum	Species	Celastraceae	Eukaryota	n.a.	n.a.	n.a.	Database[UNPD]

Note for Reference:
In addition to directly collecting NP source organism data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated them from below databases:
☉ UNPD: Universal Natural Products Database [PMID: 23638153].
☉ StreptomeDB: a database of streptomycetes natural products [PMID: 33051671].
☉ TM-MC: a database of medicinal materials and chemical compounds in Northeast Asian traditional medicine [PMID: 26156871].
☉ TCM@Taiwan: a Traditional Chinese Medicine database [PMID: 21253603].
☉ TCMID: a Traditional Chinese Medicine database [PMID: 29106634].
☉ TCMSP: The traditional Chinese medicine systems pharmacology database and analysis platform [PMID: 24735618].
☉ HerDing: a herb recommendation system to treat diseases using genes and chemicals [PMID: 26980517].
☉ MetaboLights: a metabolomics database [PMID: 27010336].
☉ FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

NP Quantity Composition/Concentration

Organism ID	Organism Name	Organism Material Preparation	Organism Part	NP Quantity (Standard)	NP Quantity (Minimum)	NP Quantity (Maximum)	Quantity Unit	Reference

Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP quantitative records for specific NP domains (e.g., NPS from foods or herbs) from domain-specific databases. These databases include:
☉ DUKE: Dr. Duke's Phytochemical and Ethnobotanical Databases.
☉ PHENOL EXPLORER: is the first comprehensive database on polyphenol content in foods [PMID: 24103452], its homepage can be accessed at here.
☉ FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

Biological Activity

Activity Type	# Activity
IC50	2
EC50	3

Activity Type	# Activity
Cell line	2
Organism	3

Molecular-level activity

Target ID	Target Type	Target Name	Target Organism	Activity Type	Activity Relation	Value	Unit	Reference

In vitro activity

Target ID	Target Type	Target Name	Target Organism	Activity Type	Activity Relation	Value	Unit	Reference
NPT759	Cell line	H9	Homo sapiens	IC50	>	100.0	ug.mL-1	PMID[18183025]
NPT24	Organism	Human immunodeficiency virus 1	Human immunodeficiency virus 1	EC50	<	0.1	ug.mL-1	PMID[21984958]
NPT24	Organism	Human immunodeficiency virus 1	Human immunodeficiency virus 1	EC50	<	100.0	nM	PMID[10869210]

In vivo activity

Target ID	Target Type	Target Name	Target Organism	Activity Type	Activity Relation	Value	Unit	Reference

Experimental ADME

Experiment Model	Experiment Tissue	ADME Type	ADME Relation	ADME Value	ADME Unit	Reference

Experimental Toxicity

Quantitative toxicity

Experiment Model	Experiment Organism	Toxicity Type	Toxicity Relation	Toxicity Value	Toxicity Unit	Reference

Common Abbreviations:
LC: Lethal Concentration; LD: Lethal Dose; LT:Lethal Time; NOAEL: No-observed-adverse-effect Level; BMDL: Benchmark Dose Lower Confidence Limit; BMD: Benchmark Dose; BMC:Benchmark Concentration; LOAEL: Lowest Observed Adverse Effect Level; RfD:Reference Dose; RfC:Reference Concentration; MRL: Minimal Risk Level; MEG: Maximum Exposure Guideline; PAC: Protective Action Criteria

Categorical toxicity labels

Hepatotoxicity	Carcinogenicity	Mutagenicity	Cardiotoxicity	Respiratory Toxicity	Eye Irritation	Endocrine Disruption

Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP toxicity records from domain-specific databases. These databases include:
☉ ToxValDB: a curated database that compiles quantitative toxicity values for chemicals from diverse public sources to support toxicological research and risk assessment.
☉ TOXRIC: a comprehensive, free-to-access, online database providing toxicological/feature data. The toxicity labels are retrieved from this database. [PMID: 36400569]

Chemically structural similarity

Similar Active Natural Products in NPASS

Top-200 similar NPs were calculated against the active-NP-set (includes approximately 50,000 NPs with experimentally-derived bioactivity available in NPASS)

Similarity is measured using the Tanimoto coefficient (Tc) , which compares the binary fingerprints of two molecules. Tc is calculated as the intersection divided by the union of '1' bits in the fingerprints, ranging from 0 to 1, with 1 indicating highest similarity.

● The left chart: Distribution of similarity level between NPC469748 and all remaining natural products in the NPASS database.
● The right table: Most similar natural products (Tc>=0.5 or Top200).

range	Tanimoto Coefficient
0-0.1	16837
0.1-0.2	31864
0.2-0.3	1026
0.3-0.4	68
0.4-0.5	46
0.5-0.6	14
0.6-0.7	3
0.7-0.8	0
0.8-0.85	0
0.85-0.9	0
0.9-0.95	0
0.95-1	0

Similarity Score	Similarity Level	Natural Product ID
0.6923	Remote Similarity	NPC475426
0.6574	Remote Similarity	NPC470306
0.6161	Remote Similarity	NPC471016
0.5798	Remote Similarity	NPC475533
0.5702	Remote Similarity	NPC600224
0.562	Remote Similarity	NPC475315
0.562	Remote Similarity	NPC328154
0.5603	Remote Similarity	NPC471014
0.5574	Remote Similarity	NPC324619
0.5574	Remote Similarity	NPC604935
0.5417	Remote Similarity	NPC475601
0.5385	Remote Similarity	NPC475408
0.5385	Remote Similarity	NPC250807
0.5385	Remote Similarity	NPC57797
0.521	Remote Similarity	NPC76565
0.521	Remote Similarity	NPC601313
0.5082	Remote Similarity	NPC146824

Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

● The left chart: Distribution of similarity level between NPC469748 and all drugs/candidates.
● The right table: Most similar clinical/approved drugs (Tc>=0.5 or Top200).

range	Tanimoto Coefficient
0-0.1	4923
0.1-0.2	4211
0.2-0.3	16
0.3-0.4	0
0.4-0.5	0
0.5-0.6	0
0.6-0.7	0
0.7-0.8	0
0.8-0.85	0
0.85-0.9	0
0.9-0.95	0
0.95-1	0

Similarity Score	Similarity Level	Drug ID	Developmental Stage
		NPD

Bioactivity similarity

Similar Natural Products in NPASS

Similarity level is defined by Bioactivity similarity was calculated based on bioactivity descriptors of compounds. The bioactivity descriptors were calculated by a recently developed AI algorithm Chemical Checker (CC) [Nature Biotechnology, 38:1087–1096, 2020; Nature Communications, 12:3932, 2021], which evaluated bioactivity similarities at five levels:
☉ A: chemistry similarity;
☉ B: biological targets similarity;
☉ C: networks similarity;
☉ D: cell-based bioactivity similarity;
☉ E: similarity based on clinical data.
Those 5 categories of CC bioactivity descriptors were calculated and then subjected to manifold projection using UMAP algorithm, to project all NPs on a 2-Dimensional space. The current NP was highlighted with a small circle in the 2-D map. Below figures: left-to-right, A-to-E.

A: chemistry similarity

B: biological targets similarity

C: networks similarity

D: cell-based bioactivity similarity

E: similarity based on clinical data