Structure

Physi-Chem Properties

Molecular Weight:  280.0
Volume:  242.706
LogP:  1.951
LogD:  1.905
LogS:  -2.543
# Rotatable Bonds:  2
TPSA:  86.47
# H-Bond Aceptor:  5
# H-Bond Donor:  3
# Rings:  3
# Heavy Atoms:  7

MedChem Properties

QED Drug-Likeness Score:  0.626
Synthetic Accessibility Score:  2.771
Fsp3:  0.091
Lipinski Rule-of-5:  Accepted
Pfizer Rule:  Accepted
GSK Rule:  Accepted
BMS Rule:  1
Golden Triangle Rule:  Accepted
Chelating Alert:  0
PAINS Alert:  0

ADMET Properties (ADMETlab2.0)

ADMET: Absorption

Caco-2 Permeability:  -5.155
MDCK Permeability:  2.1058996935607865e-05
Pgp-inhibitor:  0.003
Pgp-substrate:  0.002
Human Intestinal Absorption (HIA):  0.429
20% Bioavailability (F20%):  0.995
30% Bioavailability (F30%):  0.99

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB):  0.254
Plasma Protein Binding (PPB):  95.15650177001953%
Volume Distribution (VD):  1.085
Pgp-substrate:  12.069851875305176%

ADMET: Metabolism

CYP1A2-inhibitor:  0.971
CYP1A2-substrate:  0.123
CYP2C19-inhibitor:  0.188
CYP2C19-substrate:  0.065
CYP2C9-inhibitor:  0.345
CYP2C9-substrate:  0.69
CYP2D6-inhibitor:  0.5
CYP2D6-substrate:  0.266
CYP3A4-inhibitor:  0.773
CYP3A4-substrate:  0.19

ADMET: Excretion

Clearance (CL):  2.639
Half-life (T1/2):  0.628

ADMET: Toxicity

hERG Blockers:  0.01
Human Hepatotoxicity (H-HT):  0.376
Drug-inuced Liver Injury (DILI):  0.82
AMES Toxicity:  0.498
Rat Oral Acute Toxicity:  0.005
Maximum Recommended Daily Dose:  0.87
Skin Sensitization:  0.079
Carcinogencity:  0.335
Eye Corrosion:  0.003
Eye Irritation:  0.157
Respiratory Toxicity:  0.735

Download Data

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General Info & Identifiers & Properties  
Structure MOL file  
Source Organisms  
Biological Activities  
Similar NPs/Drugs  

  Natural Product: NPC188104

Natural Product ID:  NPC188104
Common Name*:   BJGNCJDXODQBOB-SSDOTTSWSA-N
IUPAC Name:   n.a.
Synonyms:  
Standard InCHIKey:  BJGNCJDXODQBOB-SSDOTTSWSA-N
Standard InCHI:  InChI=1S/C11H8N2O3S2/c14-5-1-2-6-8(3-5)18-10(12-6)9-13-7(4-17-9)11(15)16/h1-3,7,14H,4H2,(H,15,16)/t7-/m1/s1
SMILES:  c1cc2c(cc1O)sc(C1=N[C@H](CS1)C(=O)O)n2
Synthetic Gene Cluster:   n.a.
ChEMBL Identifier:   CHEMBL443738
PubChem CID:   NA
Chemical Classification**:  
  • CHEMONTID:0000000 [Organic compounds]
    • [CHEMONTID:0000264] Organic acids and derivatives
      • [CHEMONTID:0000265] Carboxylic acids and derivatives
        • [CHEMONTID:0000013] Amino acids, peptides, and analogues
          • [CHEMONTID:0000347] Amino acids and derivatives
            • [CHEMONTID:0000060] Alpha amino acids and derivatives

*Note: the InCHIKey will be temporarily assigned as the "Common Name" if no IUPAC name or alternative short name is available.
**Note: the Chemical Classification was calculated by NPClassifier Version 1.5. Reference: PMID:34662515.

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO27553 Derris scandens Species Fabaceae Eukaryota n.a. stem n.a. DOI[10.1016/S0031-9422(99)00103-X]
NPO27553 Derris scandens Species Fabaceae Eukaryota n.a. n.a. n.a. PMID[19969457]
NPO27553 Derris scandens Species Fabaceae Eukaryota n.a. n.a. n.a. PMID[21314138]
NPO27553 Derris scandens Species Fabaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO27553 Derris scandens Species Fabaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO27553 Derris scandens Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO27694 Hemizonia fasciculata Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO27997 Aphis affinis Species Aphididae Eukaryota n.a. n.a. n.a. Database[UNPD]

☑ Note for Reference:
In addition to directly collecting NP source organism data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated them from below databases:
UNPD: Universal Natural Products Database [PMID: 23638153].
StreptomeDB: a database of streptomycetes natural products [PMID: 33051671].
TM-MC: a database of medicinal materials and chemical compounds in Northeast Asian traditional medicine [PMID: 26156871].
TCM@Taiwan: a Traditional Chinese Medicine database [PMID: 21253603].
TCMID: a Traditional Chinese Medicine database [PMID: 29106634].
TCMSP: The traditional Chinese medicine systems pharmacology database and analysis platform [PMID: 24735618].
HerDing: a herb recommendation system to treat diseases using genes and chemicals [PMID: 26980517].
MetaboLights: a metabolomics database [PMID: 27010336].
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  NP Quantity Composition/Concentration

Organism ID NP ID Organism Material Preparation Organism Part NP Quantity (Standard) NP Quantity (Minimum) NP Quantity (Maximum) Quantity Unit Reference

☑ Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP quantitative records for specific NP domains (e.g., NPS from foods or herbs) from domain-specific databases. These databases include:
DUKE: Dr. Duke's Phytochemical and Ethnobotanical Databases.
PHENOL EXPLORER: is the first comprehensive database on polyphenol content in foods [PMID: 24103452], its homepage can be accessed at here.
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT1627 Individual Protein G-protein coupled receptor 35 Homo sapiens Activity = 11.0 % PMID[452606]
NPT1627 Individual Protein G-protein coupled receptor 35 Homo sapiens Ki = 9860.0 nM PMID[452606]
NPT1627 Individual Protein G-protein coupled receptor 35 Homo sapiens EC50 = 12900.0 nM PMID[452606]
NPT1627 Individual Protein G-protein coupled receptor 35 Homo sapiens EC50 = 277000.0 nM PMID[452606]
NPT3218 Individual Protein Ephrin type-A receptor 4 Homo sapiens Activity = 80.0 % PMID[452607]
NPT36 Individual Protein Tyrosine-protein kinase SRC Homo sapiens Activity = 99.0 % PMID[452607]
NPT283 Individual Protein MAP kinase p38 alpha Homo sapiens Activity = 97.0 % PMID[452607]
NPT1608 Individual Protein Serine/threonine-protein kinase Chk1 Homo sapiens Activity = 91.0 % PMID[452607]
NPT13 Individual Protein Tyrosine-protein kinase LCK Homo sapiens Activity = 83.0 % PMID[452607]
NPT1426 Individual Protein c-Jun N-terminal kinase 1 Homo sapiens Activity = 85.0 % PMID[452607]
NPT1699 Individual Protein 3-phosphoinositide dependent protein kinase-1 Homo sapiens Activity = 75.0 % PMID[452607]
NPT3411 Individual Protein Mitogen-activated protein kinase kinase kinase 1 Homo sapiens Activity = 82.0 % PMID[452607]
NPT2572 Individual Protein Ephrin type-B receptor 4 Homo sapiens Activity = 72.0 % PMID[452607]
NPT1615 Individual Protein MAP kinase p38 gamma Homo sapiens Activity = 90.0 % PMID[452607]
NPT1427 Individual Protein c-Jun N-terminal kinase 2 Homo sapiens Activity = 92.0 % PMID[452607]
NPT1697 Individual Protein Serine/threonine-protein kinase PAK6 Homo sapiens Activity = 92.0 % PMID[452607]
NPT3113 Individual Protein Tyrosine-protein kinase CSK Homo sapiens Activity = 93.0 % PMID[452607]
NPT1442 Individual Protein Serine/threonine-protein kinase PAK 2 Homo sapiens Activity = 70.0 % PMID[452607]
NPT1449 Individual Protein Tyrosine-protein kinase SYK Homo sapiens Activity = 68.0 % PMID[452607]
NPT282 Individual Protein MAP kinase ERK2 Homo sapiens Activity = 57.0 % PMID[452607]
NPT3455 Individual Protein Protein kinase C zeta Homo sapiens Activity = 50.0 % PMID[452607]
NPT3359 Individual Protein Ephrin type-B receptor 3 Homo sapiens Activity = 38.0 % PMID[452607]
NPT1657 Individual Protein Serine/threonine-protein kinase NEK6 Homo sapiens Activity = 75.0 % PMID[452607]
NPT281 Individual Protein MAP kinase ERK1 Homo sapiens Activity = 48.0 % PMID[452607]
NPT1614 Individual Protein MAP kinase p38 delta Homo sapiens Activity = 93.0 % PMID[452607]
NPT2574 Individual Protein Insulin receptor Homo sapiens Activity = 35.0 % PMID[452607]
NPT1616 Individual Protein MAP kinase p38 beta Homo sapiens Activity = 83.0 % PMID[452607]
NPT3207 Individual Protein c-Jun N-terminal kinase 3 Homo sapiens Activity = 79.0 % PMID[452607]
NPT3317 Individual Protein Serine/threonine-protein kinase MARK1 Homo sapiens Activity = 35.0 % PMID[452607]
NPT1696 Individual Protein Serine/threonine-protein kinase PAK7 Homo sapiens Activity = 66.0 % PMID[452607]
NPT1663 Individual Protein Tyrosine-protein kinase YES Homo sapiens Activity = 75.0 % PMID[452607]
NPT1441 Individual Protein MAP kinase-activated protein kinase 2 Homo sapiens Activity = 38.0 % PMID[452607]
NPT3235 Individual Protein MAP/microtubule affinity-regulating kinase 2 Homo sapiens Activity = 59.0 % PMID[452607]
NPT3246 Individual Protein Tyrosine-protein kinase JAK2 Homo sapiens Activity = 66.0 % PMID[452607]
NPT3266 Individual Protein Casein kinase I delta Homo sapiens Activity = 43.0 % PMID[452607]
NPT1344 Individual Protein Serine/threonine-protein kinase EEF2K Homo sapiens Activity = 53.0 % PMID[452607]
NPT3331 Individual Protein Serine/threonine-protein kinase MST2 Homo sapiens Activity = 48.0 % PMID[452607]
NPT182 Individual Protein Protein kinase C alpha Homo sapiens Activity = 69.0 % PMID[452607]
NPT3318 Individual Protein MAP/microtubule affinity-regulating kinase 4 Homo sapiens Activity = 57.0 % PMID[452607]
NPT3417 Individual Protein Serine/threonine-protein kinase TBK1 Homo sapiens Activity = 64.0 % PMID[452607]
NPT1693 Individual Protein Serine/threonine-protein kinase MST4 Homo sapiens Activity = 75.0 % PMID[452607]
NPT491 Individual Protein Dual specificity mitogen-activated protein kinase kinase 1 Homo sapiens Activity = 51.0 % PMID[452607]
NPT3106 Individual Protein Ribosomal protein S6 kinase alpha 1 Homo sapiens Activity = 47.0 % PMID[452607]
NPT3425 Individual Protein Interleukin-1 receptor-associated kinase 4 Homo sapiens Activity = 60.0 % PMID[452607]
NPT3357 Individual Protein Protein kinase N2 Homo sapiens Activity = 68.0 % PMID[452607]
NPT3280 Individual Protein Serine/threonine-protein kinase c-TAK1 Homo sapiens Activity = 40.0 % PMID[452607]
NPT1658 Individual Protein Serine/threonine-protein kinase NEK2 Homo sapiens Activity = 41.0 % PMID[452607]
NPT3444 Individual Protein Homeodomain-interacting protein kinase 1 Homo sapiens Activity = 63.0 % PMID[452607]
NPT1480 Individual Protein Fibroblast growth factor receptor 1 Homo sapiens Activity = 23.0 % PMID[452607]
NPT1695 Individual Protein Serine/threonine-protein kinase PAK 4 Homo sapiens Activity = 39.0 % PMID[452607]
NPT3225 Individual Protein Ephrin type-A receptor 2 Homo sapiens Activity = 96.0 % PMID[452607]
NPT3442 Individual Protein Mitogen-activated protein kinase kinase kinase 7 Homo sapiens Activity = 59.0 % PMID[452607]
NPT3364 Individual Protein Protein kinase C mu Homo sapiens Activity = 49.0 % PMID[452607]
NPT3326 Individual Protein Mitogen-activated protein kinase kinase kinase 9 Homo sapiens Activity = 37.0 % PMID[452607]
NPT1678 Individual Protein CaM-kinase kinase beta Homo sapiens Activity = 36.0 % PMID[452607]
NPT1438 Individual Protein Insulin-like growth factor I receptor Homo sapiens Activity = 50.0 % PMID[452607]
NPT1448 Individual Protein Serine/threonine-protein kinase Sgk1 Homo sapiens Activity = 31.0 % PMID[452607]
NPT1612 Individual Protein MAP kinase-activated protein kinase 5 Homo sapiens Activity = 60.0 % PMID[452607]
NPT3291 Individual Protein Serine/threonine-protein kinase SRPK1 Homo sapiens Activity = 29.0 % PMID[452607]
NPT2626 Individual Protein Myosin light chain kinase, smooth muscle Homo sapiens Activity = 51.0 % PMID[452607]
NPT1613 Individual Protein Ribosomal protein S6 kinase alpha 5 Homo sapiens Activity = 44.0 % PMID[452607]
NPT3409 Individual Protein Homeodomain-interacting protein kinase 3 Homo sapiens Activity = 53.0 % PMID[452607]
NPT1433 Individual Protein Serine/threonine-protein kinase Aurora-B Homo sapiens Activity = 6.0 % PMID[452607]
NPT3279 Individual Protein Serine/threonine-protein kinase 11 Homo sapiens Activity = 58.0 % PMID[452607]
NPT3238 Individual Protein Dual specificity protein kinase TTK Homo sapiens Activity = 54.0 % PMID[452607]
NPT3275 Individual Protein Inhibitor of nuclear factor kappa B kinase epsilon subunit Homo sapiens Activity = 52.0 % PMID[452607]
NPT1432 Individual Protein Serine/threonine-protein kinase Aurora-A Homo sapiens Activity = 16.0 % PMID[452607]
NPT3282 Individual Protein Maternal embryonic leucine zipper kinase Homo sapiens Activity = 49.0 % PMID[452607]
NPT3315 Individual Protein BR serine/threonine-protein kinase 1 Homo sapiens Activity = 24.0 % PMID[452607]
NPT1680 Individual Protein Serine/threonine-protein kinase Chk2 Homo sapiens Activity = 28.0 % PMID[452607]
NPT3107 Individual Protein Rho-associated protein kinase 2 Homo sapiens Activity = 16.0 % PMID[452607]
NPT1611 Individual Protein Ribosomal protein S6 kinase 1 Homo sapiens Activity = 39.0 % PMID[452607]
NPT1435 Individual Protein Receptor protein-tyrosine kinase erbB-4 Homo sapiens Activity = 24.0 % PMID[452607]
NPT1700 Individual Protein Serine/threonine-protein kinase PIM2 Homo sapiens Activity = 35.0 % PMID[452607]
NPT3328 Individual Protein Mitogen-activated protein kinase kinase kinase 11 Homo sapiens Activity = 37.0 % PMID[452607]
NPT1447 Individual Protein Serine/threonine-protein kinase RIPK2 Homo sapiens Activity = 53.0 % PMID[452607]
NPT1430 Individual Protein Serine/threonine-protein kinase AKT2 Homo sapiens Activity = 14.0 % PMID[452607]
NPT3406 Individual Protein Mitogen-activated protein kinase kinase kinase kinase 2 Homo sapiens Activity = 15.0 % PMID[452607]
NPT3344 Individual Protein BR serine/threonine-protein kinase 2 Homo sapiens Activity = 31.0 % PMID[452607]
NPT3232 Individual Protein CaM kinase I alpha Homo sapiens Activity = 52.0 % PMID[452607]
NPT1705 Individual Protein Ribosomal protein S6 kinase alpha 3 Homo sapiens Activity = 15.0 % PMID[452607]
NPT3381 Individual Protein Misshapen-like kinase 1 Homo sapiens Activity = 29.0 % PMID[452607]
NPT1660 Individual Protein NUAK family SNF1-like kinase 1 Homo sapiens Activity = 28.0 % PMID[452607]
NPT591 Individual Protein Glycogen synthase kinase-3 beta Homo sapiens Activity = 27.0 % PMID[452607]
NPT3283 Individual Protein MAP kinase-interacting serine/threonine-protein kinase MNK1 Homo sapiens Activity = 23.0 % PMID[452607]
NPT3239 Individual Protein Nerve growth factor receptor Trk-A Homo sapiens Activity = 34.0 % PMID[452607]
NPT3432 Individual Protein Homeodomain-interacting protein kinase 2 Homo sapiens Activity = 20.0 % PMID[452607]
NPT1265 Individual Protein Serine/threonine-protein kinase PIM1 Homo sapiens Activity = 33.0 % PMID[452607]
NPT3213 Individual Protein MAP kinase signal-integrating kinase 2 Homo sapiens Activity = 17.0 % PMID[452607]
NPT3461 Individual Protein MAP kinase-activated protein kinase 3 Homo sapiens Activity = 33.0 % PMID[452607]
NPT3286 Individual Protein Insulin receptor-related protein Homo sapiens Activity = 36.0 % PMID[452607]
NPT3363 Individual Protein Mitogen-activated protein kinase 15 Homo sapiens Activity = 15.0 % PMID[452607]
NPT1701 Individual Protein Serine/threonine-protein kinase PIM3 Homo sapiens Activity = 16.0 % PMID[452607]
NPT3460 Individual Protein Dual-specificity tyrosine-phosphorylation regulated kinase 3 Homo sapiens Activity = 5.0 % PMID[452607]
NPT3114 Individual Protein Dual-specificity tyrosine-phosphorylation regulated kinase 1A Homo sapiens Activity = 4.0 % PMID[452607]
NPT3399 Individual Protein Dual-specificity tyrosine-phosphorylation regulated kinase 2 Homo sapiens Activity = 4.0 % PMID[452607]
NPT1371 Individual Protein Cyclin-dependent kinase 2 Homo sapiens Tm = 47.7 degrees C PMID[452607]
NPT2 Others Unspecified Km = 2530.0 nM PMID[452605]
NPT2 Others Unspecified Activity = 80.0 % PMID[452607]
NPT728 Individual Protein Serine/threonine-protein kinase AKT Homo sapiens Activity = 82.0 % PMID[452607]
NPT831 Individual Protein Serine/threonine-protein kinase PLK1 Homo sapiens Activity = 87.0 % PMID[452607]
NPT981 Individual Protein Inhibitor of nuclear factor kappa B kinase beta subunit Homo sapiens Activity = 65.0 % PMID[452607]
NPT4086 Protein Complex Phosphorylase kinase Homo sapiens Activity = 32.0 % PMID[452607]
NPT1767 Protein Complex AMP-activated protein kinase, AMPK Homo sapiens Activity = 48.0 % PMID[452607]
NPT4158 Protein Complex CDK2/Cyclin A Homo sapiens Activity = 39.0 % PMID[452607]
NPT833 Individual Protein Tyrosine-protein kinase BTK Homo sapiens Activity = 36.0 % PMID[452607]
NPT4450 Protein Family Vascular endothelial growth factor receptor Homo sapiens Activity = 14.0 % PMID[452607]
NPT1609 Protein Complex Casein kinase II Homo sapiens Activity = 7.0 % PMID[452607]
NPT27 Others Unspecified FC = 55.9 n.a. PMID[452608]
NPT27 Others Unspecified FC = 29.7 n.a. PMID[452608]
NPT27 Others Unspecified FC = 17.9 n.a. PMID[452608]
NPT27 Others Unspecified FC = 31.8 n.a. PMID[452608]
NPT27 Others Unspecified FC = 10.0 n.a. PMID[452608]
NPT27 Others Unspecified FC = 4.1 n.a. PMID[452608]

☑ Note for Activity Records:
☉ The quantitative biological activities were primarily integrated from ChEMBL (Version-30) database and were also directly collected from PubMed literature. PubMed PMID was provided as the reference link for each activity record.

  Chemically structural similarity: I. Similar Active Natural Products in NPASS

Top-200 similar NPs were calculated against the active-NP-set (includes 4,3285 NPs with experimentally-derived bioactivity available in NPASS)

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC188104 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
0.7676 Intermediate Similarity NPC249662
0.7254 Intermediate Similarity NPC238242
0.7024 Intermediate Similarity NPC151779
0.6964 Remote Similarity NPC273714
0.6765 Remote Similarity NPC69277
0.6744 Remote Similarity NPC287895
0.6633 Remote Similarity NPC49051
0.6604 Remote Similarity NPC475350
0.6604 Remote Similarity NPC145178
0.6604 Remote Similarity NPC14877
0.6603 Remote Similarity NPC143325
0.6538 Remote Similarity NPC45459
0.6538 Remote Similarity NPC315491
0.6512 Remote Similarity NPC251036
0.6456 Remote Similarity NPC276517
0.6445 Remote Similarity NPC476098
0.6436 Remote Similarity NPC36168
0.6432 Remote Similarity NPC222592
0.6432 Remote Similarity NPC168486
0.6421 Remote Similarity NPC116573
0.6398 Remote Similarity NPC257142
0.6394 Remote Similarity NPC156704
0.6389 Remote Similarity NPC328029
0.6364 Remote Similarity NPC306376
0.6359 Remote Similarity NPC24990
0.6311 Remote Similarity NPC153467
0.6296 Remote Similarity NPC284348
0.6296 Remote Similarity NPC140284
0.6296 Remote Similarity NPC75609
0.6291 Remote Similarity NPC75498
0.627 Remote Similarity NPC470394
0.627 Remote Similarity NPC470404
0.627 Remote Similarity NPC470403
0.6269 Remote Similarity NPC25899
0.6263 Remote Similarity NPC161108
0.625 Remote Similarity NPC478141
0.6244 Remote Similarity NPC206251
0.6244 Remote Similarity NPC74382
0.6237 Remote Similarity NPC48192
0.6226 Remote Similarity NPC213308
0.6225 Remote Similarity NPC314002
0.6218 Remote Similarity NPC478030
0.6212 Remote Similarity NPC253810
0.6207 Remote Similarity NPC220765
0.6203 Remote Similarity NPC470395
0.6184 Remote Similarity NPC122427
0.6184 Remote Similarity NPC329961
0.6176 Remote Similarity NPC204717
0.617 Remote Similarity NPC220523
0.6169 Remote Similarity NPC184964
0.6169 Remote Similarity NPC161242
0.6161 Remote Similarity NPC77555
0.6154 Remote Similarity NPC79911
0.615 Remote Similarity NPC83790
0.615 Remote Similarity NPC128237
0.6146 Remote Similarity NPC241025
0.6129 Remote Similarity NPC60553
0.6124 Remote Similarity NPC165538
0.6117 Remote Similarity NPC171171
0.6108 Remote Similarity NPC229160
0.6108 Remote Similarity NPC263485
0.6108 Remote Similarity NPC25316
0.6106 Remote Similarity NPC134079
0.6103 Remote Similarity NPC120798
0.6089 Remote Similarity NPC476080
0.6089 Remote Similarity NPC475534
0.6082 Remote Similarity NPC41982
0.608 Remote Similarity NPC476103
0.607 Remote Similarity NPC303225
0.6068 Remote Similarity NPC96016
0.6068 Remote Similarity NPC295158
0.6059 Remote Similarity NPC72980
0.6059 Remote Similarity NPC475330
0.6059 Remote Similarity NPC88363
0.6058 Remote Similarity NPC224327
0.6055 Remote Similarity NPC88008
0.6048 Remote Similarity NPC99666
0.604 Remote Similarity NPC286195
0.6034 Remote Similarity NPC475196
0.6029 Remote Similarity NPC174652
0.602 Remote Similarity NPC474409
0.6011 Remote Similarity NPC320863
0.601 Remote Similarity NPC46580
0.6009 Remote Similarity NPC90229
0.5983 Remote Similarity NPC475635
0.5982 Remote Similarity NPC270918
0.5982 Remote Similarity NPC321428
0.5982 Remote Similarity NPC469928
0.5982 Remote Similarity NPC53344
0.5973 Remote Similarity NPC255110
0.5964 Remote Similarity NPC74562
0.5964 Remote Similarity NPC316181
0.5964 Remote Similarity NPC151781
0.5956 Remote Similarity NPC79386
0.5956 Remote Similarity NPC91615
0.5952 Remote Similarity NPC144381
0.5951 Remote Similarity NPC164228
0.595 Remote Similarity NPC44161
0.5945 Remote Similarity NPC211813
0.5943 Remote Similarity NPC230403
0.5936 Remote Similarity NPC85443
0.5931 Remote Similarity NPC96890
0.5926 Remote Similarity NPC249040
0.592 Remote Similarity NPC473764
0.592 Remote Similarity NPC314940
0.5917 Remote Similarity NPC138562
0.5916 Remote Similarity NPC302159
0.5916 Remote Similarity NPC161292
0.5911 Remote Similarity NPC95898
0.5909 Remote Similarity NPC177404
0.5909 Remote Similarity NPC316403
0.5907 Remote Similarity NPC472284
0.5902 Remote Similarity NPC174421
0.59 Remote Similarity NPC39092
0.5897 Remote Similarity NPC477516
0.589 Remote Similarity NPC257511
0.5888 Remote Similarity NPC84508
0.5885 Remote Similarity NPC194040
0.588 Remote Similarity NPC280714
0.588 Remote Similarity NPC18487
0.5879 Remote Similarity NPC476118
0.5876 Remote Similarity NPC14101
0.5876 Remote Similarity NPC153769
0.5872 Remote Similarity NPC470889
0.5867 Remote Similarity NPC141353
0.5865 Remote Similarity NPC320394
0.5864 Remote Similarity NPC474145
0.5864 Remote Similarity NPC475841
0.5862 Remote Similarity NPC197881
0.586 Remote Similarity NPC29702
0.586 Remote Similarity NPC272483
0.5859 Remote Similarity NPC285635
0.5859 Remote Similarity NPC322644
0.5856 Remote Similarity NPC325297
0.5845 Remote Similarity NPC161887
0.5845 Remote Similarity NPC219963
0.5845 Remote Similarity NPC266551
0.5841 Remote Similarity NPC326634
0.5841 Remote Similarity NPC74969
0.5837 Remote Similarity NPC153400
0.5833 Remote Similarity NPC151489
0.5833 Remote Similarity NPC76327
0.583 Remote Similarity NPC309845
0.5829 Remote Similarity NPC128751
0.5829 Remote Similarity NPC124542
0.5829 Remote Similarity NPC246700
0.5829 Remote Similarity NPC471177
0.5829 Remote Similarity NPC59779
0.5829 Remote Similarity NPC32771
0.5825 Remote Similarity NPC42979
0.582 Remote Similarity NPC318935
0.5817 Remote Similarity NPC176127
0.5813 Remote Similarity NPC252590
0.5812 Remote Similarity NPC470824
0.5806 Remote Similarity NPC220408
0.5805 Remote Similarity NPC224764
0.5805 Remote Similarity NPC220852
0.5802 Remote Similarity NPC469497
0.5802 Remote Similarity NPC106833
0.5799 Remote Similarity NPC470678
0.5794 Remote Similarity NPC307963
0.5794 Remote Similarity NPC473821
0.5787 Remote Similarity NPC300114
0.5784 Remote Similarity NPC471294
0.5783 Remote Similarity NPC473317
0.5779 Remote Similarity NPC131718
0.5778 Remote Similarity NPC472098
0.5776 Remote Similarity NPC245348
0.5773 Remote Similarity NPC200836
0.5771 Remote Similarity NPC471178
0.5771 Remote Similarity NPC473886
0.5771 Remote Similarity NPC330009
0.5769 Remote Similarity NPC477891
0.5767 Remote Similarity NPC93390
0.5766 Remote Similarity NPC193238
0.5764 Remote Similarity NPC313804
0.5764 Remote Similarity NPC315804
0.5764 Remote Similarity NPC74360
0.5755 Remote Similarity NPC183805
0.5751 Remote Similarity NPC60006
0.5748 Remote Similarity NPC324149
0.5747 Remote Similarity NPC475070
0.5744 Remote Similarity NPC148592
0.5742 Remote Similarity NPC212535
0.5741 Remote Similarity NPC242209
0.5741 Remote Similarity NPC251090
0.5741 Remote Similarity NPC222018
0.574 Remote Similarity NPC171787
0.5735 Remote Similarity NPC258773
0.5735 Remote Similarity NPC121658
0.5735 Remote Similarity NPC14651
0.5732 Remote Similarity NPC315893
0.5732 Remote Similarity NPC313587
0.5732 Remote Similarity NPC28945
0.5732 Remote Similarity NPC316110
0.5732 Remote Similarity NPC285343
0.5722 Remote Similarity NPC122542
0.5721 Remote Similarity NPC472286
0.5721 Remote Similarity NPC478032
0.5721 Remote Similarity NPC264285

  Chemically structural similarity: II. Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC188104 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.8162 Intermediate Similarity NPD954 Phase 1
0.7853 Intermediate Similarity NPD1218 Approved
0.7853 Intermediate Similarity NPD1219 Approved
0.766 Intermediate Similarity NPD9542 Approved
0.7449 Intermediate Similarity NPD1788 Approved
0.7449 Intermediate Similarity NPD1789 Approved
0.7366 Intermediate Similarity NPD158 Discontinued
0.7172 Intermediate Similarity NPD3127 Clinical (unspecified phase)
0.7129 Intermediate Similarity NPD1897 Discontinued
0.7048 Intermediate Similarity NPD5191 Clinical (unspecified phase)
0.701 Intermediate Similarity NPD5144 Discontinued
0.6893 Remote Similarity NPD5628 Clinical (unspecified phase)
0.6872 Remote Similarity NPD5502 Approved
0.6872 Remote Similarity NPD5503 Approved
0.6825 Remote Similarity NPD5452 Phase 2
0.6823 Remote Similarity NPD924 Discontinued
0.6808 Remote Similarity NPD5101 Discontinued
0.6806 Remote Similarity NPD647 Approved
0.68 Remote Similarity NPD4949 Discontinued
0.6784 Remote Similarity NPD2015 Discontinued
0.6776 Remote Similarity NPD5059 Clinical (unspecified phase)
0.6703 Remote Similarity NPD5189 Clinical (unspecified phase)
0.6698 Remote Similarity NPD5453 Phase 2
0.6697 Remote Similarity NPD3611 Phase 3
0.6636 Remote Similarity NPD4331 Approved
0.6635 Remote Similarity NPD4134 Clinical (unspecified phase)
0.6631 Remote Similarity NPD5634 Approved
0.6616 Remote Similarity NPD1745 Approved
0.6601 Remote Similarity NPD3288 Approved
0.659 Remote Similarity NPD3759 Clinical (unspecified phase)
0.6574 Remote Similarity NPD7496 Phase 2
0.6567 Remote Similarity NPD2749 Discontinued
0.6549 Remote Similarity NPD3074 Discontinued
0.6546 Remote Similarity NPD754 Clinical (unspecified phase)
0.6544 Remote Similarity NPD1976 Approved
0.6538 Remote Similarity NPD484 Approved
0.65 Remote Similarity NPD2306 Approved
0.6488 Remote Similarity NPD2717 Phase 2
0.6481 Remote Similarity NPD3328 Phase 2
0.6381 Remote Similarity NPD6389 Clinical (unspecified phase)
0.6368 Remote Similarity NPD6324 Phase 1
0.6368 Remote Similarity NPD952 Approved
0.6356 Remote Similarity NPD7873 Clinical (unspecified phase)
0.634 Remote Similarity NPD6205 Discontinued
0.634 Remote Similarity NPD6276 Discontinued
0.6333 Remote Similarity NPD5828 Phase 2
0.6316 Remote Similarity NPD1597 Phase 1
0.6313 Remote Similarity NPD3223 Clinical (unspecified phase)
0.6305 Remote Similarity NPD6344 Clinical (unspecified phase)
0.6286 Remote Similarity NPD2718 Clinical (unspecified phase)
0.627 Remote Similarity NPD4884 Discovery
0.6267 Remote Similarity NPD6246 Approved
0.622 Remote Similarity NPD3396 Approved
0.622 Remote Similarity NPD3395 Approved
0.6218 Remote Similarity NPD704 Clinical (unspecified phase)
0.6217 Remote Similarity NPD4460 Clinical (unspecified phase)
0.6216 Remote Similarity NPD2021 Discontinued
0.6202 Remote Similarity NPD981 Phase 2
0.6162 Remote Similarity NPD7135 Phase 2
0.6161 Remote Similarity NPD6988 Phase 1
0.6151 Remote Similarity NPD6155 Phase 1
0.6147 Remote Similarity NPD4850 Phase 1
0.6146 Remote Similarity NPD4436 Clinical (unspecified phase)
0.6141 Remote Similarity NPD2058 Phase 2
0.6141 Remote Similarity NPD2059 Approved
0.6141 Remote Similarity NPD2057 Approved
0.614 Remote Similarity NPD4044 Discontinued
0.6134 Remote Similarity NPD604 Clinical (unspecified phase)
0.6114 Remote Similarity NPD6508 Approved
0.6096 Remote Similarity NPD7540 Clinical (unspecified phase)
0.6092 Remote Similarity NPD5817 Discontinued
0.6089 Remote Similarity NPD6159 Phase 2
0.6085 Remote Similarity NPD7241 Phase 3
0.6085 Remote Similarity NPD7242 Phase 3
0.6085 Remote Similarity NPD2959 Phase 3
0.6071 Remote Similarity NPD3487 Phase 1
0.6071 Remote Similarity NPD3354 Phase 2
0.6067 Remote Similarity NPD7214 Phase 3
0.6067 Remote Similarity NPD6450 Phase 2
0.6065 Remote Similarity NPD6888 Discontinued
0.6064 Remote Similarity NPD649 Clinical (unspecified phase)
0.6062 Remote Similarity NPD4439 Discontinued
0.605 Remote Similarity NPD3756 Phase 1
0.6049 Remote Similarity NPD4438 Approved
0.6048 Remote Similarity NPD8284 Discontinued
0.6045 Remote Similarity NPD5420 Discontinued
0.6043 Remote Similarity NPD1592 Phase 3
0.6042 Remote Similarity NPD5663 Discontinued
0.6041 Remote Similarity NPD862 Approved
0.6041 Remote Similarity NPD863 Approved
0.6041 Remote Similarity NPD861 Approved
0.6034 Remote Similarity NPD4930 Approved
0.6034 Remote Similarity NPD4928 Approved
0.6034 Remote Similarity NPD4929 Approved
0.6028 Remote Similarity NPD1315 Clinical (unspecified phase)
0.6026 Remote Similarity NPD7711 Discontinued
0.6018 Remote Similarity NPD7468 Clinical (unspecified phase)
0.6017 Remote Similarity NPD7215 Phase 2
0.6017 Remote Similarity NPD3292 Discontinued
0.601 Remote Similarity NPD2383 Phase 1
0.601 Remote Similarity NPD5755 Clinical (unspecified phase)
0.6008 Remote Similarity NPD6495 Clinical (unspecified phase)
0.6 Remote Similarity NPD4856 Approved
0.6 Remote Similarity NPD938 Approved
0.6 Remote Similarity NPD4855 Phase 1
0.5992 Remote Similarity NPD7226 Phase 3
0.5992 Remote Similarity NPD7227 Phase 3
0.5983 Remote Similarity NPD5047 Clinical (unspecified phase)
0.5982 Remote Similarity NPD8015 Phase 3
0.5979 Remote Similarity NPD9469 Approved
0.5963 Remote Similarity NPD6138 Clinical (unspecified phase)
0.5953 Remote Similarity NPD6137 Clinical (unspecified phase)
0.5952 Remote Similarity NPD4081 Clinical (unspecified phase)
0.5951 Remote Similarity NPD6452 Discontinued
0.595 Remote Similarity NPD6475 Phase 2
0.595 Remote Similarity NPD2844 Phase 3
0.5946 Remote Similarity NPD7703 Clinical (unspecified phase)
0.5943 Remote Similarity NPD5575 Clinical (unspecified phase)
0.5938 Remote Similarity NPD4897 Phase 2
0.5934 Remote Similarity NPD7868 Clinical (unspecified phase)
0.5928 Remote Similarity NPD5639 Clinical (unspecified phase)
0.5915 Remote Similarity NPD4418 Discontinued
0.5913 Remote Similarity NPD3279 Phase 2
0.5909 Remote Similarity NPD8071 Approved
0.5907 Remote Similarity NPD772 Phase 3
0.5899 Remote Similarity NPD5259 Phase 3
0.5895 Remote Similarity NPD2321 Approved
0.589 Remote Similarity NPD4906 Approved
0.589 Remote Similarity NPD4903 Approved
0.589 Remote Similarity NPD4905 Approved
0.5885 Remote Similarity NPD5523 Approved
0.5885 Remote Similarity NPD8101 Phase 3
0.5885 Remote Similarity NPD5524 Approved
0.5885 Remote Similarity NPD3326 Clinical (unspecified phase)
0.5885 Remote Similarity NPD1744 Approved
0.5879 Remote Similarity NPD5138 Approved
0.5879 Remote Similarity NPD5140 Approved
0.5877 Remote Similarity NPD1213 Phase 3
0.5871 Remote Similarity NPD3858 Discontinued
0.587 Remote Similarity NPD5046 Discontinued
0.5864 Remote Similarity NPD4904 Approved
0.586 Remote Similarity NPD7948 Phase 1
0.5858 Remote Similarity NPD7816 Clinical (unspecified phase)
0.5852 Remote Similarity NPD7399 Clinical (unspecified phase)
0.5847 Remote Similarity NPD3838 Phase 3
0.5844 Remote Similarity NPD7719 Discontinued
0.5843 Remote Similarity NPD522 Approved
0.5841 Remote Similarity NPD5904 Clinical (unspecified phase)
0.5838 Remote Similarity NPD4669 Clinical (unspecified phase)
0.5838 Remote Similarity NPD4671 Clinical (unspecified phase)
0.5838 Remote Similarity NPD4670 Clinical (unspecified phase)
0.5837 Remote Similarity NPD8108 Approved
0.5837 Remote Similarity NPD5857 Phase 3
0.5833 Remote Similarity NPD9507 Approved
0.5833 Remote Similarity NPD2114 Discontinued
0.5829 Remote Similarity NPD6349 Phase 1
0.5824 Remote Similarity NPD9376 Approved
0.582 Remote Similarity NPD7691 Clinical (unspecified phase)
0.5816 Remote Similarity NPD6134 Phase 2
0.5813 Remote Similarity NPD2123 Phase 3
0.5811 Remote Similarity NPD2916 Discontinued
0.5811 Remote Similarity NPD3351 Approved
0.581 Remote Similarity NPD3039 Clinical (unspecified phase)
0.5806 Remote Similarity NPD5050 Approved
0.5802 Remote Similarity NPD5316 Approved
0.5802 Remote Similarity NPD6348 Clinical (unspecified phase)
0.5798 Remote Similarity NPD203 Clinical (unspecified phase)
0.5795 Remote Similarity NPD6158 Phase 2
0.5795 Remote Similarity NPD6476 Clinical (unspecified phase)
0.5794 Remote Similarity NPD4910 Phase 1
0.5794 Remote Similarity NPD9695 Approved
0.5794 Remote Similarity NPD1038 Approved
0.5794 Remote Similarity NPD6170 Phase 2
0.5792 Remote Similarity NPD8107 Approved
0.5789 Remote Similarity NPD5020 Approved
0.5789 Remote Similarity NPD2417 Approved
0.5789 Remote Similarity NPD2416 Approved
0.5789 Remote Similarity NPD2011 Clinical (unspecified phase)
0.5789 Remote Similarity NPD4127 Clinical (unspecified phase)
0.5787 Remote Similarity NPD1504 Discontinued
0.5783 Remote Similarity NPD5506 Approved
0.5783 Remote Similarity NPD5507 Approved
0.5782 Remote Similarity NPD6393 Clinical (unspecified phase)
0.5775 Remote Similarity NPD4918 Discontinued
0.5773 Remote Similarity NPD6139 Clinical (unspecified phase)
0.5766 Remote Similarity NPD8255 Phase 2
0.5766 Remote Similarity NPD7452 Approved
0.5766 Remote Similarity NPD7222 Phase 2
0.5766 Remote Similarity NPD3350 Approved
0.5766 Remote Similarity NPD7453 Approved
0.5764 Remote Similarity NPD1575 Approved
0.5764 Remote Similarity NPD1573 Approved
0.5761 Remote Similarity NPD8100 Phase 3
0.576 Remote Similarity NPD3469 Phase 3
0.576 Remote Similarity NPD6846 Clinical (unspecified phase)
0.5759 Remote Similarity NPD8061 Clinical (unspecified phase)
0.5756 Remote Similarity NPD9690 Approved
0.5756 Remote Similarity NPD1260 Approved
0.5746 Remote Similarity NPD5818 Discontinued
0.5746 Remote Similarity NPD5443 Clinical (unspecified phase)

  Bioactivity similarity: Similar Natural Products in NPASS

Bioactivity similarity was calculated based on bioactivity descriptors of compounds. The bioactivity descriptors were calculated by a recently developed AI algorithm Chemical Checker (CC) [Nature Biotechnology, 38:1087–1096, 2020; Nature Communications, 12:3932, 2021], which evaluated bioactivity similarities at five levels:
A: chemistry similarity;
B: biological targets similarity;
C: networks similarity;
D: cell-based bioactivity similarity;
E: similarity based on clinical data.

Those 5 categories of CC bioactivity descriptors were calculated and then subjected to manifold projection using UMAP algorithm, to project all NPs on a 2-Dimensional space. The current NP was highlighted with a small circle in the 2-D map. Below figures: left-to-right, A-to-E.

A: chemistry similarity
B: biological targets similarity
C: networks similarity
D: cell-based bioactivity similarity
E: similarity based on clinical data