Natural Product: NPC184045
Natural Product ID:   | NPC184045 |
Common Name*:   | MFPAGFFHWQHANG-XVOGWUIDSA-N |
IUPAC Name:   | n.a. |
Synonyms:   | |
Standard InCHIKey:   | MFPAGFFHWQHANG-XVOGWUIDSA-N |
Standard InCHI:   | InChI=1S/C38H42O11/c1-21-17-18-28(42)38(45)29(46-22(2)39)20-27-36(4,5)32(48-34(43)24-13-9-7-10-14-24)30(47-23(3)40)33(37(27,6)31(38)26(41)19-21)49-35(44)25-15-11-8-12-16-25/h7-17,27,29-33,45H,18-20H2,1-6H3/b21-17-/t27-,29+,30-,31+,32+,33-,37-,38-/m1/s1 |
SMILES:   | CC1=CCC(=O)[C@]2([C@H](C[C@@H]3C(C)(C)[C@H]([C@H]([C@H]([C@@]3(C)[C@@H]2C(=O)C1)OC(=O)c1ccccc1)OC(=O)C)OC(=O)c1ccccc1)OC(=O)C)O
|
Synthetic Gene Cluster:   |
n.a. |
ChEMBL Identifier:   |
n.a. |
PubChem CID:   |
n.a. |
Chemical Classification**:   |
-
CHEMONTID:0000000 [Organic compounds]
-
[CHEMONTID:0000264] Organic acids and derivatives
-
[CHEMONTID:0000265] Carboxylic acids and derivatives
[CHEMONTID:0002966] Tetracarboxylic acids and derivatives
|
*Note: the InCHIKey will be temporarily assigned as the "Common Name" if no IUPAC name or alternative short name is available.
**Note: the Chemical Classification was calculated by NPClassifier Version 1.5. Reference: PMID:34662515.
  Species Source
Organism ID |
Organism Name |
Taxonomy Level |
Family |
SuperKingdom |
Isolation Part |
Collection Location |
Collection Time |
Reference |
NPO22900 |
Orthosiphon stamineus |
Species |
Lamiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
PMID[11374950] |
NPO19451 |
Salvia prionitis |
Species |
Lamiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
PMID[11473439] |
NPO19451 |
Salvia prionitis |
Species |
Lamiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
PMID[12141863] |
NPO22900 |
Orthosiphon stamineus |
Species |
Lamiaceae |
Eukaryota |
n.a. |
Indonesia |
n.a. |
PMID[12467611] |
NPO22900 |
Orthosiphon stamineus |
Species |
Lamiaceae |
Eukaryota |
aerial parts |
Bangdung, Indonesia |
2000-Aug |
PMID[12608860] |
NPO22900 |
Orthosiphon stamineus |
Species |
Lamiaceae |
Eukaryota |
n.a. |
Taiwan |
n.a. |
PMID[15104497] |
NPO21944 |
Laurencia mariannensis |
Species |
Rhodomelaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
PMID[18076141] |
NPO5877 |
Morus yunnanensis |
Species |
Moraceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
PMID[22165973] |
NPO19152 |
Empetrum nigrum |
Species |
Ericaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
PMID[26473275] |
NPO23000 |
Zephyranthes carinata |
Species |
Amaryllidaceae |
Eukaryota |
Whole Plants |
n.a. |
n.a. |
PMID[28898076] |
NPO3549 |
Euonymus maackii |
Species |
Celastraceae |
Eukaryota |
Seeds |
n.a. |
n.a. |
PMID[31713425] |
NPO23226 |
Satureja montana |
Species |
Lamiaceae |
Eukaryota |
Plant |
n.a. |
n.a. |
Database[FooDB] |
NPO19152 |
Empetrum nigrum |
Species |
Ericaceae |
Eukaryota |
|
n.a. |
n.a. |
Database[FooDB] |
NPO19451 |
Salvia prionitis |
Species |
Lamiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO21807 |
Lindera umbellata |
Species |
Lauraceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO23141 |
Angelica ursina |
Species |
Apiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO22900 |
Orthosiphon stamineus |
Species |
Lamiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO19929 |
Jateorhiza palmata |
Species |
Menispermaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO19152 |
Empetrum nigrum |
Species |
Ericaceae |
Eukaryota |
n.a. |
n.a. |
|
Database[Phenol-Explorer] |
NPO19152 |
Empetrum nigrum |
Species |
Ericaceae |
Eukaryota |
Fruits |
n.a. |
|
Database[Phenol-Explorer] |
NPO23226 |
Satureja montana |
Species |
Lamiaceae |
Eukaryota |
n.a. |
n.a. |
|
Database[Phenol-Explorer] |
NPO19451 |
Salvia prionitis |
Species |
Lamiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO22071 |
Gentiana olivieri |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO22462 |
Chlorophytum malayense |
Species |
Asparagaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO3549 |
Euonymus maackii |
Species |
Celastraceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO19929 |
Jateorhiza palmata |
Species |
Menispermaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO22900 |
Orthosiphon stamineus |
Species |
Lamiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO21807 |
Lindera umbellata |
Species |
Lauraceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO21881 |
Stephania succifera |
Species |
Menispermaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO23141 |
Angelica ursina |
Species |
Apiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO19929 |
Jateorhiza palmata |
Species |
Menispermaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCM_Taiwan] |
NPO21807 |
Lindera umbellata |
Species |
Lauraceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCM_Taiwan] |
NPO22900 |
Orthosiphon stamineus |
Species |
Lamiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCM_Taiwan] |
NPO19451 |
Salvia prionitis |
Species |
Lamiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCM_Taiwan] |
NPO22518 |
Gnetum cleistostachyum |
Species |
Gnetaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO23062 |
Melibe leonina |
Species |
Dendronotidae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO7320 |
Nicotiana gossei |
Species |
Solanaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO22952 |
Senecio grandiflorus |
Species |
Asteraceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO21745 |
Phleum africanum |
Species |
Poaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO22717 |
Pinus thunbergii |
Species |
Pinaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO19929 |
Jateorhiza palmata |
Species |
Menispermaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO23000 |
Zephyranthes carinata |
Species |
Amaryllidaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO22197 |
Eriogaster lanestris |
Species |
Lasiocampidae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO5877 |
Morus yunnanensis |
Species |
Moraceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO21545 |
Maytenus guianensis |
Species |
Celastraceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO23183 |
Pinus halepensis |
Species |
Pinaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO16275 |
Pterocaulon rugosum |
Species |
Asteraceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO19152 |
Empetrum nigrum |
Species |
Ericaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO22911 |
Enterococcus faecalis |
Species |
Enterococcaceae |
Bacteria |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO19451 |
Salvia prionitis |
Species |
Lamiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO20726 |
Ophioplocus japonicus |
Species |
Ophiolepididae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO10353 |
Rauvolfia tetraphylla |
Species |
Apocynaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO21807 |
Lindera umbellata |
Species |
Lauraceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO22137 |
Vernonia serratuloides |
Species |
Asteraceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO21384 |
Tetraria capillaris |
Species |
Cyperaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO23141 |
Angelica ursina |
Species |
Apiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO22462 |
Chlorophytum malayense |
Species |
Asparagaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO22015 |
Clausena indica |
Species |
Rutaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO22395 |
Ardisia macrocarpa |
Species |
Primulaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO23101 |
Ircinia aruensis |
Species |
Irciniidae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO21881 |
Stephania succifera |
Species |
Menispermaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO3549 |
Euonymus maackii |
Species |
Celastraceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO14664 |
Stevia salicifolia |
Species |
Asteraceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO22900 |
Orthosiphon stamineus |
Species |
Lamiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO14529 |
Asterias rubens |
Species |
Asteriidae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO20100 |
Ephedra lomatolepis |
Species |
Ephedraceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO21140 |
Igernella notabilis |
Species |
Dictyodendrillidae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO22773 |
Teucrium alyssifolium |
Species |
Lamiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO22071 |
Gentiana olivieri |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO20964 |
Picradeniopsis oppositifolia |
Species |
Asteraceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO23226 |
Satureja montana |
Species |
Lamiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO21944 |
Laurencia mariannensis |
Species |
Rhodomelaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO21680 |
Saussurea triangulata |
Species |
Asteraceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
☑ Note for Reference:
In addition to directly collecting NP source organism data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated them from below databases:
☉ UNPD: Universal Natural Products Database [PMID: 23638153].
☉ StreptomeDB: a database of streptomycetes natural products [PMID: 33051671].
☉ TM-MC: a database of medicinal materials and chemical compounds in Northeast Asian traditional medicine [PMID: 26156871].
☉ TCM@Taiwan: a Traditional Chinese Medicine database [PMID: 21253603].
☉ TCMID: a Traditional Chinese Medicine database [PMID: 29106634].
☉ TCMSP: The traditional Chinese medicine systems pharmacology database and analysis platform [PMID: 24735618].
☉ HerDing: a herb recommendation system to treat diseases using genes and chemicals [PMID: 26980517].
☉ MetaboLights: a metabolomics database [PMID: 27010336].
☉ FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].
  NP Quantity Composition/Concentration
Organism ID |
NP ID |
Organism Material Preparation |
Organism Part |
NP Quantity (Standard) |
NP Quantity (Minimum) |
NP Quantity (Maximum) |
Quantity Unit |
Reference |
☑ Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP quantitative records for specific NP domains (e.g., NPS from foods or herbs) from domain-specific databases. These databases include:
☉ DUKE: Dr. Duke's Phytochemical and Ethnobotanical Databases.
☉ PHENOL EXPLORER: is the first comprehensive database on polyphenol content in foods [PMID: 24103452], its homepage can be accessed at here.
☉ FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].
  Biological Activity
Target ID |
Target Type |
Target Name |
Target Organism |
Activity Type |
Activity Relation |
Value |
Unit |
Reference |
☑ Note for Activity Records:
☉ The quantitative biological activities were primarily integrated from ChEMBL (Version-30) database and were also directly collected from PubMed literature. PubMed PMID was provided as the reference link for each activity record.
  Chemically structural similarity: I. Similar Active Natural Products in NPASS
Top-200 similar NPs were calculated against the active-NP-set (includes 4,3285 NPs with experimentally-derived bioactivity available in NPASS)
Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient
●  The left chart: Distribution of similarity level between NPC184045 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).
range |
Tanimoto Coefficient |
0-0.1 | 348 |
0.1-0.2 | 1181 |
0.2-0.3 | 2482 |
0.3-0.4 | 4967 |
0.4-0.5 | 9518 |
0.5-0.6 | 10542 |
0.6-0.7 | 10292 |
0.7-0.8 | 2968 |
0.8-0.85 | 182 |
0.85-0.9 | 172 |
0.9-0.95 | 32 |
0.95-1 | 13 |
Similarity Score |
Similarity Level |
Natural Product ID |
  Chemically structural similarity: II. Similar Clinical/Approved Drugs
Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.
●  The left chart: Distribution of similarity level between NPC184045 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).
range |
Tanimoto Coefficient |
0-0.1 | 291 |
0.1-0.2 | 784 |
0.2-0.3 | 1525 |
0.3-0.4 | 2829 |
0.4-0.5 | 2238 |
0.5-0.6 | 1084 |
0.6-0.7 | 331 |
0.7-0.8 | 67 |
0.8-0.85 | 1 |
0.85-0.9 | 0 |
0.9-0.95 | 0 |
0.95-1 | 0 |
Similarity Score |
Similarity Level |
Drug ID |
Developmental Stage |