Natural Product: NPC162656
Natural Product ID:   | NPC162656 |
Common Name*:   | VSJGJMKGNMDJCI-JCHAVLMJSA-N |
IUPAC Name:   | n.a. |
Synonyms:   | |
Standard InCHIKey:   | VSJGJMKGNMDJCI-JCHAVLMJSA-N |
Standard InCHI:   | InChI=1S/C16H22O9/c1-2-7-8-3-4-22-14(21)9(8)6-23-15(7)25-16-13(20)12(19)11(18)10(5-17)24-16/h2,6-8,10-13,15-20H,1,3-5H2/t7-,8+,10+,11+,12-,13+,15+,16-/m0/s1 |
SMILES:   | C=C[C@H]1[C@H]2CCOC(=O)C2=CO[C@@H]1O[C@H]1[C@@H]([C@H]([C@@H]([C@@H](CO)O1)O)O)O
|
Synthetic Gene Cluster:   |
n.a. |
ChEMBL Identifier:   |
n.a. |
PubChem CID:   |
9906781 |
Chemical Classification**:   |
-
CHEMONTID:0000000 [Organic compounds]
-
[CHEMONTID:0004603] Organic oxygen compounds
-
[CHEMONTID:0000323] Organooxygen compounds
[CHEMONTID:0000011] Carbohydrates and carbohydrate conjugates[CHEMONTID:0002105] Glycosyl compounds[CHEMONTID:0002207] O-glycosyl compounds
|
*Note: the InCHIKey will be temporarily assigned as the "Common Name" if no IUPAC name or alternative short name is available.
**Note: the Chemical Classification was calculated by NPClassifier Version 1.5. Reference: PMID:34662515.
  Species Source
Organism ID |
Organism Name |
Taxonomy Level |
Family |
SuperKingdom |
Isolation Part |
Collection Location |
Collection Time |
Reference |
NPO20502 |
Swertia cincta |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
DOI[10.1002/cbdv.200490123] |
NPO22457 |
Swertia calycina |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
DOI[10.1002/cbdv.200490123] |
NPO23023 |
Swertia pubescens |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
DOI[10.1002/cbdv.200490123] |
NPO14238 |
Swertia punicea |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
DOI[10.1002/cbdv.200490123] |
NPO14535 |
Swertia fasciculata |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
DOI[10.1002/cbdv.200490123] |
NPO26491 |
Swertia nervosa |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
DOI[10.1002/cbdv.200490123] |
NPO1515 |
Lonicera japonica |
Species |
Caprifoliaceae |
Eukaryota |
Flowers |
n.a. |
n.a. |
DOI[10.1002/elan.200403102] |
NPO2355 |
Swertia macrosperma |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
DOI[10.1016/0031-9422(89)80400-5] |
NPO14685 |
Swertia franchetiana |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
DOI[10.1016/j.bse.2004.02.008] |
NPO1515 |
Lonicera japonica |
Species |
Caprifoliaceae |
Eukaryota |
Flowers |
n.a. |
n.a. |
DOI[10.1016/j.foodchem.2012.02.124] |
NPO17774 |
Hemerocallis fulva |
Species |
Xanthorrhoeaceae |
Eukaryota |
Flowers |
n.a. |
n.a. |
DOI[10.1016/j.lwt.2014.11.023] |
NPO30223 |
Swertia chirata |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
DOI[10.1016/S0040-4039(00)72792-4] |
NPO30223 |
Swertia chirata |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
DOI[10.1016/S0040-4039(00)95355-3] |
NPO14238 |
Swertia punicea |
Species |
Gentianaceae |
Eukaryota |
n.a. |
whole plant |
n.a. |
DOI[10.1021/jo00025a032] |
NPO14238 |
Swertia punicea |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
DOI[10.1021/np50072a022] |
NPO30223 |
Swertia chirata |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
DOI[10.1248/cpb.30.4088] |
NPO1515 |
Lonicera japonica |
Species |
Caprifoliaceae |
Eukaryota |
Flowers |
n.a. |
n.a. |
PMID[11077184] |
NPO5881 |
Catharanthus roseus |
Species |
Apocynaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
PMID[12628396] |
NPO1515 |
Lonicera japonica |
Species |
Caprifoliaceae |
Eukaryota |
Flowers |
n.a. |
n.a. |
PMID[17328234] |
NPO10429 |
Gentiana scabra |
Species |
Gentianaceae |
Eukaryota |
n.a. |
rhizome |
n.a. |
PMID[17404979] |
NPO1515 |
Lonicera japonica |
Species |
Caprifoliaceae |
Eukaryota |
Flower buds |
n.a. |
n.a. |
PMID[18321056] |
NPO5881 |
Catharanthus roseus |
Species |
Apocynaceae |
Eukaryota |
Hairy roots |
n.a. |
n.a. |
PMID[19271765] |
NPO14238 |
Swertia punicea |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
PMID[20677781] |
NPO1515 |
Lonicera japonica |
Species |
Caprifoliaceae |
Eukaryota |
n.a. |
flower |
n.a. |
PMID[21804227] |
NPO31453 |
Swertia mileensis |
Species |
Gentianaceae |
Eukaryota |
n.a. |
whole plant |
n.a. |
PMID[21823575] |
NPO1515 |
Lonicera japonica |
Species |
Caprifoliaceae |
Eukaryota |
n.a. |
flower bud |
n.a. |
PMID[21942812] |
NPO1515 |
Lonicera japonica |
Species |
Caprifoliaceae |
Eukaryota |
flower buds |
Henan province, China |
2005-MAY |
PMID[21942812] |
NPO27 |
Gentiana dahurica |
Species |
Gentianaceae |
Eukaryota |
n.a. |
root |
n.a. |
PMID[22233034] |
NPO2355 |
Swertia macrosperma |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
PMID[2239318] |
NPO1515 |
Lonicera japonica |
Species |
Caprifoliaceae |
Eukaryota |
n.a. |
leaf |
n.a. |
PMID[23265495] |
NPO1515 |
Lonicera japonica |
Species |
Caprifoliaceae |
Eukaryota |
Flower buds |
n.a. |
n.a. |
PMID[24279769] |
NPO10429 |
Gentiana scabra |
Species |
Gentianaceae |
Eukaryota |
n.a. |
root |
n.a. |
PMID[26129938] |
NPO5881 |
Catharanthus roseus |
Species |
Apocynaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
PMID[26285573] |
NPO12588 |
Cornus officinalis |
Species |
Cornaceae |
Eukaryota |
Fruits |
n.a. |
n.a. |
PMID[29140705] |
NPO362 |
Gentiana crassicaulis |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
PMID[33052051] |
NPO26491 |
Swertia nervosa |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
PMID[4472648] |
NPO30223 |
Swertia chirata |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
PMID[4712626] |
NPO5881 |
Catharanthus roseus |
Species |
Apocynaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
PMID[6619887] |
NPO5881 |
Catharanthus roseus |
Species |
Apocynaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
PMID[6631435] |
NPO5881 |
Catharanthus roseus |
Species |
Apocynaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
PMID[7264679] |
NPO5881 |
Catharanthus roseus |
Species |
Apocynaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
PMID[7264682] |
NPO5881 |
Catharanthus roseus |
Species |
Apocynaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
PMID[7320741] |
NPO14685 |
Swertia franchetiana |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
PMID[7513747] |
NPO14685 |
Swertia franchetiana |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
PMID[7561895] |
NPO31453 |
Swertia mileensis |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
PMID[8720386] |
NPO17171 |
Tripterospermum taiwanense |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[Article] |
NPO30223 |
Swertia chirata |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[Article] |
NPO23835 |
Swertia angustifolia |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[Article] |
NPO31453 |
Swertia mileensis |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[Article] |
NPO26491 |
Swertia nervosa |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[Article] |
NPO8516 |
Dipsacus asperoides |
Species |
Caprifoliaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO1111 |
Swertia erythrosticta |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO1034 |
Ophiorrhiza liukiuensis |
Species |
Rubiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO17171 |
Tripterospermum taiwanense |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO17774 |
Hemerocallis fulva |
Species |
Xanthorrhoeaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO5881 |
Catharanthus roseus |
Species |
Apocynaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO27 |
Gentiana dahurica |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO22457 |
Swertia calycina |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO1515 |
Lonicera japonica |
Species |
Caprifoliaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO23835 |
Swertia angustifolia |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO10429 |
Gentiana scabra |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO10647 |
Gentiana lactea |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO29049 |
Sinoadina racemosa |
Species |
Rubiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO14381 |
Swertia pseudochinensis |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO18560 |
Tripterospermum japonicum |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO18896 |
Swertia chinensis |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO20502 |
Swertia cincta |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO26491 |
Swertia nervosa |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO23023 |
Swertia pubescens |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO31453 |
Swertia mileensis |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO362 |
Gentiana crassicaulis |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO2355 |
Swertia macrosperma |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO12588 |
Cornus officinalis |
Species |
Cornaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO14535 |
Swertia fasciculata |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO14685 |
Swertia franchetiana |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO30223 |
Swertia chirata |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO14238 |
Swertia punicea |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[HerDing] |
NPO14685 |
Swertia franchetiana |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO10429 |
Gentiana scabra |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO362 |
Gentiana crassicaulis |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO20502 |
Swertia cincta |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO2355 |
Swertia macrosperma |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO1111 |
Swertia erythrosticta |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO22457 |
Swertia calycina |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO14238 |
Swertia punicea |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO18896 |
Swertia chinensis |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO17774 |
Hemerocallis fulva |
Species |
Xanthorrhoeaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO14535 |
Swertia fasciculata |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO23835 |
Swertia angustifolia |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO8516 |
Dipsacus asperoides |
Species |
Caprifoliaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO23023 |
Swertia pubescens |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO12588 |
Cornus officinalis |
Species |
Cornaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO1515 |
Lonicera japonica |
Species |
Caprifoliaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO26632 |
Swertia chirayita |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO14381 |
Swertia pseudochinensis |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO29049 |
Sinoadina racemosa |
Species |
Rubiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO20828 |
Swertia leducii |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO18560 |
Tripterospermum japonicum |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO10647 |
Gentiana lactea |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO26491 |
Swertia nervosa |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO5881 |
Catharanthus roseus |
Species |
Apocynaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO17171 |
Tripterospermum taiwanense |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO1034 |
Ophiorrhiza liukiuensis |
Species |
Rubiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO27 |
Gentiana dahurica |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCMID] |
NPO31453 |
Swertia mileensis |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCM_Taiwan] |
NPO23835 |
Swertia angustifolia |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCM_Taiwan] |
NPO17774 |
Hemerocallis fulva |
Species |
Xanthorrhoeaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCM_Taiwan] |
NPO2355 |
Swertia macrosperma |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCM_Taiwan] |
NPO10429 |
Gentiana scabra |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCM_Taiwan] |
NPO362 |
Gentiana crassicaulis |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCM_Taiwan] |
NPO8516 |
Dipsacus asperoides |
Species |
Caprifoliaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCM_Taiwan] |
NPO1515 |
Lonicera japonica |
Species |
Caprifoliaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCM_Taiwan] |
NPO27 |
Gentiana dahurica |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCM_Taiwan] |
NPO12588 |
Cornus officinalis |
Species |
Cornaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCM_Taiwan] |
NPO14381 |
Swertia pseudochinensis |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCM_Taiwan] |
NPO30223 |
Swertia chirata |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCM_Taiwan] |
NPO5881 |
Catharanthus roseus |
Species |
Apocynaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCM_Taiwan] |
NPO14238 |
Swertia punicea |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCM_Taiwan] |
NPO22457 |
Swertia calycina |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCM_Taiwan] |
NPO10647 |
Gentiana lactea |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TCM_Taiwan] |
NPO1515 |
Lonicera japonica |
Species |
Caprifoliaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TM-MC] |
NPO14381 |
Swertia pseudochinensis |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TM-MC] |
NPO12588 |
Cornus officinalis |
Species |
Cornaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TM-MC] |
NPO20828 |
Swertia leducii |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TM-MC] |
NPO17774 |
Hemerocallis fulva |
Species |
Xanthorrhoeaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TM-MC] |
NPO27 |
Gentiana dahurica |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TM-MC] |
NPO8516 |
Dipsacus asperoides |
Species |
Caprifoliaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TM-MC] |
NPO362 |
Gentiana crassicaulis |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TM-MC] |
NPO10429 |
Gentiana scabra |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[TM-MC] |
NPO12588 |
Cornus officinalis |
Species |
Cornaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO10429 |
Gentiana scabra |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO20828 |
Swertia leducii |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO8516 |
Dipsacus asperoides |
Species |
Caprifoliaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO23835 |
Swertia angustifolia |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO22457 |
Swertia calycina |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO14381 |
Swertia pseudochinensis |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO14238 |
Swertia punicea |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO362 |
Gentiana crassicaulis |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO29049 |
Sinoadina racemosa |
Species |
Rubiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO5881 |
Catharanthus roseus |
Species |
Apocynaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO20502 |
Swertia cincta |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO18896 |
Swertia chinensis |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO17774 |
Hemerocallis fulva |
Species |
Xanthorrhoeaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO14685 |
Swertia franchetiana |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO1515 |
Lonicera japonica |
Species |
Caprifoliaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO1034 |
Ophiorrhiza liukiuensis |
Species |
Rubiaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO10647 |
Gentiana lactea |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO17171 |
Tripterospermum taiwanense |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO2355 |
Swertia macrosperma |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO18560 |
Tripterospermum japonicum |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO26632 |
Swertia chirayita |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
NPO27 |
Gentiana dahurica |
Species |
Gentianaceae |
Eukaryota |
n.a. |
n.a. |
n.a. |
Database[UNPD] |
☑ Note for Reference:
In addition to directly collecting NP source organism data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated them from below databases:
☉ UNPD: Universal Natural Products Database [PMID: 23638153].
☉ StreptomeDB: a database of streptomycetes natural products [PMID: 33051671].
☉ TM-MC: a database of medicinal materials and chemical compounds in Northeast Asian traditional medicine [PMID: 26156871].
☉ TCM@Taiwan: a Traditional Chinese Medicine database [PMID: 21253603].
☉ TCMID: a Traditional Chinese Medicine database [PMID: 29106634].
☉ TCMSP: The traditional Chinese medicine systems pharmacology database and analysis platform [PMID: 24735618].
☉ HerDing: a herb recommendation system to treat diseases using genes and chemicals [PMID: 26980517].
☉ MetaboLights: a metabolomics database [PMID: 27010336].
☉ FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].
  NP Quantity Composition/Concentration
Organism ID |
NP ID |
Organism Material Preparation |
Organism Part |
NP Quantity (Standard) |
NP Quantity (Minimum) |
NP Quantity (Maximum) |
Quantity Unit |
Reference |
☑ Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP quantitative records for specific NP domains (e.g., NPS from foods or herbs) from domain-specific databases. These databases include:
☉ DUKE: Dr. Duke's Phytochemical and Ethnobotanical Databases.
☉ PHENOL EXPLORER: is the first comprehensive database on polyphenol content in foods [PMID: 24103452], its homepage can be accessed at here.
☉ FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].
  Biological Activity
Target ID |
Target Type |
Target Name |
Target Organism |
Activity Type |
Activity Relation |
Value |
Unit |
Reference |
☑ Note for Activity Records:
☉ The quantitative biological activities were primarily integrated from ChEMBL (Version-30) database and were also directly collected from PubMed literature. PubMed PMID was provided as the reference link for each activity record.
  Chemically structural similarity: I. Similar Active Natural Products in NPASS
Top-200 similar NPs were calculated against the active-NP-set (includes 4,3285 NPs with experimentally-derived bioactivity available in NPASS)
Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient
●  The left chart: Distribution of similarity level between NPC162656 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).
range |
Tanimoto Coefficient |
0-0.1 | 229 |
0.1-0.2 | 1670 |
0.2-0.3 | 5477 |
0.3-0.4 | 12321 |
0.4-0.5 | 12171 |
0.5-0.6 | 8299 |
0.6-0.7 | 2249 |
0.7-0.8 | 225 |
0.8-0.85 | 30 |
0.85-0.9 | 10 |
0.9-0.95 | 11 |
0.95-1 | 5 |
Similarity Score |
Similarity Level |
Natural Product ID |
  Chemically structural similarity: II. Similar Clinical/Approved Drugs
Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.
●  The left chart: Distribution of similarity level between NPC162656 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).
range |
Tanimoto Coefficient |
0-0.1 | 206 |
0.1-0.2 | 1974 |
0.2-0.3 | 4095 |
0.3-0.4 | 1940 |
0.4-0.5 | 663 |
0.5-0.6 | 233 |
0.6-0.7 | 37 |
0.7-0.8 | 2 |
0.8-0.85 | 0 |
0.85-0.9 | 0 |
0.9-0.95 | 0 |
0.95-1 | 0 |
Similarity Score |
Similarity Level |
Drug ID |
Developmental Stage |