Natural Product: NPC146728

Natural Product IDNPC146728
Common Name
?
The InCHIKey will be temporarily assigned as the "Common Name" if no IUPAC name or alternative short name is available.
SGNBVLSWZMBQTH-VFHDLKEOSA-N
IUPAC Name n.a.
Synonyms
Synthetic Gene Cluster n.a.
ChEMBL Identifier n.a.
PubChem CID n.a.
Chemical Classification
  • CHEMONTID:0000000 [Organic compounds]
    • [CHEMONTID:0000012] Lipids and lipid-like molecules
      • [CHEMONTID:0000258] Steroids and steroid derivatives
        • [CHEMONTID:0003567] Ergostane steroids
          • [CHEMONTID:0001403] Ergosterols and derivatives

The Chemical Classification was calculated by Classyfire, a software for chemical taxonomy calculation. Reference: DOI:10.1186/s13321-016-0174-y.

  Chemical Representations

Standard InCHIKey SGNBVLSWZMBQTH-VFHDLKEOSA-N
Standard InCHI InChI=1S/C28H48O/c1-18(2)19(3)7-8-20(4)24-11-12-25-23-10-9-21-17-22(29)13-15-27(21,5)26(23)14-16-28(24,25)6/h9,18-20,22-26,29H,7-8,10-17H2,1-6H3/t19-,20-,22+,23-,24-,25-,26-,27+,28-/m1/s1
SMILES CC(C)[C@H](C)CC[C@@H](C)[C@H]1CC[C@@H]2[C@H]3CC=C4C[C@H](CC[C@]4(C)[C@@H]3CC[C@]12C)O

  Calculated Properties

Physi-Chem Properties

MedChem Properties

ADMET Properties (ADMETlab3.0)

ADMET: Absorption

ADMET: Distribution

ADMET: Metabolism

ADMET: Excretion

ADMET: Toxicity

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO14602 Vitex negundo Species Lamiaceae Eukaryota leaves n.a. n.a. PMID[12828478]
NPO9965 Eurycoma longifolia Species Simaroubaceae Eukaryota Roots n.a. n.a. PMID[14575431]
NPO14602 Vitex negundo Species Lamiaceae Eukaryota n.a. root n.a. PMID[15520511]
NPO14602 Vitex negundo Species Lamiaceae Eukaryota seeds n.a. n.a. PMID[15620254]
NPO14602 Vitex negundo Species Lamiaceae Eukaryota seeds n.a. n.a. PMID[1624939]
NPO14602 Vitex negundo Species Lamiaceae Eukaryota n.a. n.a. n.a. PMID[17027268]
NPO9965 Eurycoma longifolia Species Simaroubaceae Eukaryota n.a. root n.a. PMID[1800638]
NPO9965 Eurycoma longifolia Species Simaroubaceae Eukaryota n.a. n.a. n.a. PMID[19299148]
NPO9965 Eurycoma longifolia Species Simaroubaceae Eukaryota roots n.a. n.a. PMID[19299148]
NPO12525 Eriosema chinense Species Fabaceae Eukaryota Roots n.a. n.a. PMID[19555123]
NPO28478 Magnolia ovata Species Magnoliaceae Eukaryota n.a. leaf n.a. PMID[19658431]
NPO11530 Heterosigma akashiwo Species Chattonellaceae Eukaryota n.a. n.a. n.a. PMID[19659728]
NPO14602 Vitex negundo Species Lamiaceae Eukaryota Seeds n.a. n.a. PMID[19715321]
NPO9965 Eurycoma longifolia Species Simaroubaceae Eukaryota n.a. n.a. n.a. PMID[19919052]
NPO14602 Vitex negundo Species Lamiaceae Eukaryota Seeds n.a. n.a. PMID[19931461]
NPO28478 Magnolia ovata Species Magnoliaceae Eukaryota n.a. fruit n.a. PMID[23157012]
NPO14602 Vitex negundo Species Lamiaceae Eukaryota n.a. n.a. n.a. PMID[23403897]
NPO9965 Eurycoma longifolia Species Simaroubaceae Eukaryota n.a. n.a. n.a. PMID[24467387]
NPO9965 Eurycoma longifolia Species Simaroubaceae Eukaryota roots n.a. n.a. PMID[25066952]
NPO26465 Coreopsis tinctoria Species Asteraceae Eukaryota n.a. n.a. n.a. PMID[25516207]
NPO9965 Eurycoma longifolia Species Simaroubaceae Eukaryota n.a. n.a. n.a. PMID[25905468]
NPO5401 Monanchora unguiculata Species Crambeidae Eukaryota n.a. n.a. n.a. PMID[28368118]
NPO9644 Euphorbia resinifera Species Euphorbiaceae Eukaryota n.a. n.a. n.a. PMID[29667820]
NPO26763 Rhododendron micranthum Species Ericaceae Eukaryota Leaves n.a. n.a. PMID[30452260]
NPO14602 Vitex negundo Species Lamiaceae Eukaryota n.a. n.a. n.a. PMID[38163555]
NPO7049 Trichocolea tomentella Species Trichocoleaceae Eukaryota n.a. n.a. n.a. PMID[8792619]
NPO12525 Eriosema chinense Species Fabaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO14602 Vitex negundo Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO12988 Blainvillea latifolia Species Asteraceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO9965 Eurycoma longifolia Species Simaroubaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO3924 Penicillium alutaceum Species Aspergillaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO26401 Andrographis neesiana Species Acanthaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO26465 Coreopsis tinctoria Species Asteraceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO893 Helichrysum sutherlandii Species Asteraceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO8133 Woodwardia orientalis Species Blechnaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO5401 Monanchora unguiculata Species Crambeidae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO13494 Prosopis kuntzei Species Fabaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO9644 Euphorbia resinifera Species Euphorbiaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO9024 Aralidium pinnatifidum Species Torricelliaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO26777 Pneumatopteris pennigera Species Thelypteridaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO20383 Stenocereus thurberi Species Cactaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO26763 Rhododendron micranthum Species Ericaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO8220 Russula sardonia Species Russulaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO20318 Acinetobacter baumannii Species Moraxellaceae Bacteria n.a. n.a. n.a. Database[COCONUT]
NPO11530 Heterosigma akashiwo Species Chattonellaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO13604 Dermocybe cardinalis Species Cortinariaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO7049 Trichocolea tomentella Species Trichocoleaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO26763 Rhododendron micranthum Species Ericaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO8133 Woodwardia orientalis Species Blechnaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO14602 Vitex negundo Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO24699 Phlogacanthus curviflorus Species Acanthaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO9965 Eurycoma longifolia Species Simaroubaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO9644 Euphorbia resinifera Species Euphorbiaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO9965 Eurycoma longifolia Species Simaroubaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO9644 Euphorbia resinifera Species Euphorbiaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO26763 Rhododendron micranthum Species Ericaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO14602 Vitex negundo Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO24699 Phlogacanthus curviflorus Species Acanthaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO8133 Woodwardia orientalis Species Blechnaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO26401 Andrographis neesiana Species Acanthaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO893 Helichrysum sutherlandii Species Asteraceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO8133 Woodwardia orientalis Species Blechnaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO14602 Vitex negundo Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO26763 Rhododendron micranthum Species Ericaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO14602 Vitex negundo Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO9024 Aralidium pinnatifidum Species Torricelliaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO13604 Dermocybe cardinalis Species Cortinariaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO1418 Boletinus paluster Species Gyrodontaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO2084 Acinetobacter calcoaceticus Species Moraxellaceae Bacteria n.a. n.a. n.a. Database[UNPD]
NPO6626 Pteris spinulosa Species Pteridaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20318 Acinetobacter baumannii Species Moraxellaceae Bacteria n.a. n.a. n.a. Database[UNPD]
NPO5401 Monanchora unguiculata Species Crambeidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO11072 Geigeria schinzii Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO6014 Goniothalamus undulatus Species Annonaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO14280 Helichrysum angustifolium Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO3576 Bersama swinnyi Species Melianthaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO3924 Penicillium alutaceum Species Aspergillaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO28478 Magnolia ovata Species Magnoliaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO11530 Heterosigma akashiwo Species Chattonellaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO9965 Eurycoma longifolia Species Simaroubaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO9644 Euphorbia resinifera Species Euphorbiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO8820 Lophocereus marginatus Species Cactaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO8220 Russula sardonia Species Russulaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO13692 Leontice kiangnanensis Species Berberidaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO14602 Vitex negundo Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO24989 Solanum cleistogamum Species Solanaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO12026 Papaver radicatum Species Papaveraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO2505 Pachycereus pringlei Species Cactaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20383 Stenocereus thurberi Species Cactaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO9375 Medium grandiflorum n.a. n.a. n.a. n.a. n.a. n.a. Database[UNPD]
NPO893 Helichrysum sutherlandii Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO13494 Prosopis kuntzei Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO13798 Cheilanthes marantae Species Pteridaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26465 Coreopsis tinctoria Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO22888 Lophiostoma vaginatispora Species Lophiostomataceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26777 Pneumatopteris pennigera Species Thelypteridaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO12890 Ophryosporus charua Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO8640 Nemuaron humboldtii Species Atherospermataceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO12577 Pinus glauca Species Pinaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO5287 Strychnos cathayensis Species Loganiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO12988 Blainvillea latifolia Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26401 Andrographis neesiana Species Acanthaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO7049 Trichocolea tomentella Species Trichocoleaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO12525 Eriosema chinense Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26763 Rhododendron micranthum Species Ericaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO8133 Woodwardia orientalis Species Blechnaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO9572 Myrtopsis sellingii Species Rutaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO23412 Uvaria afzelii Species Annonaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26202 Loranthus pentandrus Species Loranthaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO15746 Athelia rolfsii Species Atheliaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO24699 Phlogacanthus curviflorus Species Acanthaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25352 Pluchea odora Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]

Note for Reference:
In addition to directly collecting NP source organism data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated them from below databases:
UNPD: Universal Natural Products Database [PMID: 23638153].
StreptomeDB: a database of streptomycetes natural products [PMID: 33051671].
TM-MC: a database of medicinal materials and chemical compounds in Northeast Asian traditional medicine [PMID: 26156871].
TCM@Taiwan: a Traditional Chinese Medicine database [PMID: 21253603].
TCMID: a Traditional Chinese Medicine database [PMID: 29106634].
TCMSP: The traditional Chinese medicine systems pharmacology database and analysis platform [PMID: 24735618].
HerDing: a herb recommendation system to treat diseases using genes and chemicals [PMID: 26980517].
MetaboLights: a metabolomics database [PMID: 27010336].
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].



  NP Quantity Composition/Concentration

Organism ID Organism Name Organism Material Preparation Organism Part NP Quantity (Standard) NP Quantity (Minimum) NP Quantity (Maximum) Quantity Unit Reference

Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP quantitative records for specific NP domains (e.g., NPS from foods or herbs) from domain-specific databases. These databases include:
DUKE: Dr. Duke's Phytochemical and Ethnobotanical Databases.
PHENOL EXPLORER: is the first comprehensive database on polyphenol content in foods [PMID: 24103452], its homepage can be accessed at here.
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].



 Biological Activity

Molecular-level activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference

In vitro activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference

In vivo activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference





 Experimental ADME

Experiment Model Experiment Tissue ADME Type ADME Relation ADME Value ADME Unit Reference





 Experimental Toxicity

Quantitative toxicity

Experiment Model Experiment Organism Toxicity Type Toxicity Relation Toxicity Value Toxicity Unit Reference

Common Abbreviations:
LC: Lethal Concentration; LD: Lethal Dose; LT:Lethal Time; NOAEL: No-observed-adverse-effect Level; BMDL: Benchmark Dose Lower Confidence Limit; BMD: Benchmark Dose; BMC:Benchmark Concentration; LOAEL: Lowest Observed Adverse Effect Level; RfD:Reference Dose; RfC:Reference Concentration; MRL: Minimal Risk Level; MEG: Maximum Exposure Guideline; PAC: Protective Action Criteria

Categorical toxicity labels

Hepatotoxicity Carcinogenicity Mutagenicity Cardiotoxicity Respiratory Toxicity Eye Irritation Endocrine Disruption
Hepatotoxicity Carcinogenicity Mutagenicity Cardiotoxicity Respiratory Toxicity Eye Irritation Endocrine Disruption

Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP toxicity records from domain-specific databases. These databases include:
ToxValDB: a curated database that compiles quantitative toxicity values for chemicals from diverse public sources to support toxicological research and risk assessment.
TOXRIC: a comprehensive, free-to-access, online database providing toxicological/feature data. The toxicity labels are retrieved from this database. [PMID: 36400569]


  Chemically structural similarity

Similar Active Natural Products in NPASS

Top-200 similar NPs were calculated against the active-NP-set (includes approximately 50,000 NPs with experimentally-derived bioactivity available in NPASS)

Similarity is measured using the Tanimoto coefficient (Tc) , which compares the binary fingerprints of two molecules. Tc is calculated as the intersection divided by the union of '1' bits in the fingerprints, ranging from 0 to 1, with 1 indicating highest similarity.

●  The left chart: Distribution of similarity level between NPC146728 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.5 or Top200).

Similarity Score Similarity Level Natural Product ID
1.0 High Similarity NPC162742
1.0 High Similarity NPC304309
1.0 High Similarity NPC470228
0.8936 High Similarity NPC230301
0.8913 High Similarity NPC34019
0.8542 High Similarity NPC198968
0.8542 High Similarity NPC285893
0.8511 High Similarity NPC22105
0.8511 High Similarity NPC107059
0.8333 Intermediate Similarity NPC136188
0.8333 Intermediate Similarity NPC28657
0.8333 Intermediate Similarity NPC474216
0.8163 Intermediate Similarity NPC134847
0.8 Intermediate Similarity NPC241290
0.8 Intermediate Similarity NPC164840
0.8 Intermediate Similarity NPC484739
0.8 Intermediate Similarity NPC209944
0.8 Intermediate Similarity NPC155986
0.7843 Intermediate Similarity NPC321381
0.7692 Intermediate Similarity NPC59453
0.7647 Intermediate Similarity NPC264245
0.76 Intermediate Similarity NPC154330
0.7547 Intermediate Similarity NPC603646
0.7451 Intermediate Similarity NPC113733
0.7407 Intermediate Similarity NPC473943
0.74 Intermediate Similarity NPC600590
0.7358 Intermediate Similarity NPC472265
0.7273 Intermediate Similarity NPC488870
0.7091 Intermediate Similarity NPC155011
0.7059 Intermediate Similarity NPC221758
0.6981 Remote Similarity NPC51014
0.6964 Remote Similarity NPC47761
0.6727 Remote Similarity NPC33913
0.6604 Remote Similarity NPC328313
0.6545 Remote Similarity NPC328714
0.6538 Remote Similarity NPC81306
0.6491 Remote Similarity NPC243985
0.6491 Remote Similarity NPC280710
0.6491 Remote Similarity NPC240650
0.6429 Remote Similarity NPC318495
0.64 Remote Similarity NPC96319
0.6379 Remote Similarity NPC474164
0.6316 Remote Similarity NPC477522
0.625 Remote Similarity NPC87604
0.6066 Remote Similarity NPC601043
0.6066 Remote Similarity NPC605412
0.6034 Remote Similarity NPC474752
0.6034 Remote Similarity NPC474683
0.5965 Remote Similarity NPC145879
0.5893 Remote Similarity NPC28862
0.5862 Remote Similarity NPC1272
0.5862 Remote Similarity NPC470614
0.5818 Remote Similarity NPC151519
0.5714 Remote Similarity NPC20688
0.569 Remote Similarity NPC31564
0.5645 Remote Similarity NPC474970
0.5614 Remote Similarity NPC76879
0.5593 Remote Similarity NPC474778
0.5593 Remote Similarity NPC474733
0.55 Remote Similarity NPC474759
0.55 Remote Similarity NPC44083
0.5439 Remote Similarity NPC109546
0.5439 Remote Similarity NPC247325
0.5439 Remote Similarity NPC317458
0.5439 Remote Similarity NPC47982
0.5424 Remote Similarity NPC26959
0.5397 Remote Similarity NPC474189
0.5345 Remote Similarity NPC84694
0.5345 Remote Similarity NPC143182
0.5345 Remote Similarity NPC20610
0.5345 Remote Similarity NPC609126
0.5312 Remote Similarity NPC176012
0.5254 Remote Similarity NPC317927
0.5246 Remote Similarity NPC474732
0.5246 Remote Similarity NPC58063
0.5238 Remote Similarity NPC475032
0.5231 Remote Similarity NPC5985
0.5224 Remote Similarity NPC235126
0.5224 Remote Similarity NPC309493
0.5224 Remote Similarity NPC242419
0.5217 Remote Similarity NPC22140
0.5217 Remote Similarity NPC243728
0.5172 Remote Similarity NPC189972
0.5167 Remote Similarity NPC476082
0.5167 Remote Similarity NPC470383
0.5161 Remote Similarity NPC7505
0.5161 Remote Similarity NPC475789
0.5161 Remote Similarity NPC82986
0.5161 Remote Similarity NPC268406
0.5156 Remote Similarity NPC474349
0.5152 Remote Similarity NPC91604
0.5147 Remote Similarity NPC147835
0.5147 Remote Similarity NPC253645
0.5147 Remote Similarity NPC85001
0.5147 Remote Similarity NPC95920
0.5143 Remote Similarity NPC3715
0.5082 Remote Similarity NPC153987
0.5082 Remote Similarity NPC474634
0.5077 Remote Similarity NPC475033
0.5077 Remote Similarity NPC599942
0.5072 Remote Similarity NPC486119

Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC146728 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.5 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.8936 High Similarity NPD7339 Approved
0.8333 Intermediate Similarity NPD6942 Phase 4
0.7059 Intermediate Similarity NPD4786 Phase 1
0.64 Remote Similarity NPD3701 Pre-clinical
0.5818 Remote Similarity NPD3667 Phase 4

Bioactivity similarity

  Bioactivity similarity

Similar Natural Products in NPASS

Similarity level is defined by Bioactivity similarity was calculated based on bioactivity descriptors of compounds. The bioactivity descriptors were calculated by a recently developed AI algorithm Chemical Checker (CC) [Nature Biotechnology, 38:1087–1096, 2020; Nature Communications, 12:3932, 2021], which evaluated bioactivity similarities at five levels:
A: chemistry similarity;
B: biological targets similarity;
C: networks similarity;
D: cell-based bioactivity similarity;
E: similarity based on clinical data.
Those 5 categories of CC bioactivity descriptors were calculated and then subjected to manifold projection using UMAP algorithm, to project all NPs on a 2-Dimensional space. The current NP was highlighted with a small circle in the 2-D map. Below figures: left-to-right, A-to-E.

A: chemistry similarity
B: biological targets similarity
C: networks similarity
D: cell-based bioactivity similarity
E: similarity based on clinical data