Structure

Physi-Chem Properties

Molecular Weight:  377.2
Volume:  399.79
LogP:  5.346
LogD:  3.843
LogS:  -6.297
# Rotatable Bonds:  3
TPSA:  30.93
# H-Bond Aceptor:  4
# H-Bond Donor:  0
# Rings:  5
# Heavy Atoms:  4

MedChem Properties

QED Drug-Likeness Score:  0.606
Synthetic Accessibility Score:  2.873
Fsp3:  0.417
Lipinski Rule-of-5:  Accepted
Pfizer Rule:  Rejected
GSK Rule:  Rejected
BMS Rule:  0
Golden Triangle Rule:  Accepted
Chelating Alert:  0
PAINS Alert:  0

ADMET Properties (ADMETlab2.0)

ADMET: Absorption

Caco-2 Permeability:  -5.123
MDCK Permeability:  2.471024708938785e-05
Pgp-inhibitor:  0.988
Pgp-substrate:  0.977
Human Intestinal Absorption (HIA):  0.002
20% Bioavailability (F20%):  0.305
30% Bioavailability (F30%):  0.312

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB):  0.919
Plasma Protein Binding (PPB):  82.66683197021484%
Volume Distribution (VD):  1.748
Pgp-substrate:  3.9023373126983643%

ADMET: Metabolism

CYP1A2-inhibitor:  0.539
CYP1A2-substrate:  0.977
CYP2C19-inhibitor:  0.209
CYP2C19-substrate:  0.927
CYP2C9-inhibitor:  0.015
CYP2C9-substrate:  0.789
CYP2D6-inhibitor:  0.976
CYP2D6-substrate:  0.941
CYP3A4-inhibitor:  0.077
CYP3A4-substrate:  0.828

ADMET: Excretion

Clearance (CL):  9.31
Half-life (T1/2):  0.149

ADMET: Toxicity

hERG Blockers:  0.571
Human Hepatotoxicity (H-HT):  0.617
Drug-inuced Liver Injury (DILI):  0.956
AMES Toxicity:  0.855
Rat Oral Acute Toxicity:  0.663
Maximum Recommended Daily Dose:  0.903
Skin Sensitization:  0.953
Carcinogencity:  0.232
Eye Corrosion:  0.003
Eye Irritation:  0.02
Respiratory Toxicity:  0.936

Download Data

Data Type Select
General Info & Identifiers & Properties  
Structure MOL file  
Source Organisms  
Biological Activities  
Similar NPs/Drugs  

  Natural Product: NPC144863

Natural Product ID:  NPC144863
Common Name*:   Cryptopleurine
IUPAC Name:   (14aR)-2,3,6-trimethoxy-11,12,13,14,14a,15-hexahydro-9H-phenanthro[9,10-b]quinolizine
Synonyms:   (-)-Cryptopleurine; Cryptopleurine; R-Cryptopleurine
Standard InCHIKey:  RSHYSOGXGSUUIJ-OAHLLOKOSA-N
Standard InCHI:  InChI=1S/C24H27NO3/c1-26-16-7-8-17-19(11-16)21-13-24(28-3)23(27-2)12-20(21)18-10-15-6-4-5-9-25(15)14-22(17)18/h7-8,11-13,15H,4-6,9-10,14H2,1-3H3/p+1/t15-/m1/s1
SMILES:  COc1ccc2c(c1)c1cc(c(cc1c1C[C@H]3CCCC[NH+]3Cc21)OC)OC
Synthetic Gene Cluster:   n.a.
ChEMBL Identifier:   CHEMBL198075
PubChem CID:   92765
Chemical Classification**:  
  • CHEMONTID:0000000 [Organic compounds]
    • [CHEMONTID:0002448] Benzenoids
      • [CHEMONTID:0000025] Phenanthrenes and derivatives
        • [CHEMONTID:0001907] Phenanthroquinolizidines

*Note: the InCHIKey will be temporarily assigned as the "Common Name" if no IUPAC name or alternative short name is available.
**Note: the Chemical Classification was calculated by NPClassifier Version 1.5. Reference: PMID:34662515.

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO13539 Thuja occidentalis Species Cupressaceae Eukaryota n.a. n.a. n.a. PMID[11000026]
NPO24232 Boehmeria pannosa Species Urticaceae Eukaryota roots n.a. n.a. PMID[16872154]
NPO9055 Aspergillus novofumigatus Species Aspergillaceae Eukaryota n.a. n.a. n.a. PMID[27626956]
NPO13539 Thuja occidentalis Species Cupressaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO17443 Phleum pratense Species Poaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO13539 Thuja occidentalis Species Cupressaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO11350 Lissodendoryx topsenti Species Coelosphaeridae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO14513 Lupinus laxus Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO17443 Phleum pratense Species Poaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO13539 Thuja occidentalis Species Cupressaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO12997 Callicarpa purpurea Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO24232 Boehmeria pannosa Species Urticaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO9055 Aspergillus novofumigatus Species Aspergillaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO3217 Cryptocarya massoy Species Lauraceae Eukaryota n.a. n.a. n.a. Database[UNPD]

☑ Note for Reference:
In addition to directly collecting NP source organism data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated them from below databases:
UNPD: Universal Natural Products Database [PMID: 23638153].
StreptomeDB: a database of streptomycetes natural products [PMID: 33051671].
TM-MC: a database of medicinal materials and chemical compounds in Northeast Asian traditional medicine [PMID: 26156871].
TCM@Taiwan: a Traditional Chinese Medicine database [PMID: 21253603].
TCMID: a Traditional Chinese Medicine database [PMID: 29106634].
TCMSP: The traditional Chinese medicine systems pharmacology database and analysis platform [PMID: 24735618].
HerDing: a herb recommendation system to treat diseases using genes and chemicals [PMID: 26980517].
MetaboLights: a metabolomics database [PMID: 27010336].
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  NP Quantity Composition/Concentration

Organism ID NP ID Organism Material Preparation Organism Part NP Quantity (Standard) NP Quantity (Minimum) NP Quantity (Maximum) Quantity Unit Reference

☑ Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP quantitative records for specific NP domains (e.g., NPS from foods or herbs) from domain-specific databases. These databases include:
DUKE: Dr. Duke's Phytochemical and Ethnobotanical Databases.
PHENOL EXPLORER: is the first comprehensive database on polyphenol content in foods [PMID: 24103452], its homepage can be accessed at here.
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT2326 Cell Line BT-20 Homo sapiens IC50 = 3.0 nM PMID[507132]
NPT4648 Cell Line MAT-Ly-Lu Rattus norvegicus IC50 = 3.0 nM PMID[507132]
NPT4649 Cell Line KHOS/NP Homo sapiens IC50 = 10.0 nM PMID[507132]
NPT762 Cell Line A-431 Homo sapiens IC50 = 3.0 nM PMID[507132]
NPT1083 Cell Line A-375 Homo sapiens IC50 = 3.0 nM PMID[507132]
NPT81 Cell Line A549 Homo sapiens IC50 = 3.0 nM PMID[507132]
NPT148 Cell Line HCT-15 Homo sapiens IC50 = 3.0 nM PMID[507132]
NPT2419 Cell Line HT-1376 Homo sapiens IC50 = 4.0 nM PMID[507132]
NPT2400 Cell Line PA-1 Homo sapiens IC50 = 2.0 nM PMID[507132]
NPT4650 Cell Line BUD-8 Homo sapiens IC50 = 6.0 nM PMID[507132]
NPT4651 Cell Line Ramos Homo sapiens IC50 = 3.0 nM PMID[507132]
NPT464 Cell Line Daudi Homo sapiens IC50 = 2.0 nM PMID[507132]
NPT2844 Cell Line MES-SA Homo sapiens IC50 = 3.0 nM PMID[507132]
NPT2829 Cell Line MES-SA/DxS Homo sapiens IC50 = 3.0 nM PMID[507132]
NPT83 Cell Line MCF7 Homo sapiens IC50 = 3.0 nM PMID[507132]
NPT81 Cell Line A549 Homo sapiens GI50 = 1.38 nM PMID[507134]
NPT90 Cell Line DU-145 Homo sapiens GI50 = 1.59 nM PMID[507134]
NPT91 Cell Line KB Homo sapiens GI50 = 1.51 nM PMID[507134]
NPT180 Cell Line HCT-8 Homo sapiens GI50 = 1.09 nM PMID[507134]
NPT737 Cell Line HUVEC Homo sapiens GI50 = 11.0 nM PMID[507134]
NPT81 Cell Line A549 Homo sapiens GI50 < 1.0 nM PMID[507135]
NPT116 Cell Line HL-60 Homo sapiens GI50 < 1.0 nM PMID[507135]
NPT368 Cell Line SN12C Homo sapiens GI50 n.a. 50.0 nM PMID[507136]
NPT370 Cell Line NCI-H23 Homo sapiens GI50 n.a. 1.637 nM PMID[507136]
NPT371 Cell Line UO-31 Homo sapiens GI50 n.a. 5.0 nM PMID[507136]
NPT116 Cell Line HL-60 Homo sapiens GI50 n.a. 5.0 nM PMID[507136]
NPT372 Cell Line HOP-92 Homo sapiens GI50 n.a. 5.0 nM PMID[507136]
NPT374 Cell Line SF-539 Homo sapiens GI50 n.a. 5.0 nM PMID[507136]
NPT373 Cell Line SK-MEL-5 Homo sapiens GI50 n.a. 5.0 nM PMID[507136]
NPT375 Cell Line Malme-3M Homo sapiens GI50 n.a. 5.0 nM PMID[507136]
NPT376 Cell Line A498 Homo sapiens GI50 n.a. 5.0 nM PMID[507136]
NPT111 Cell Line K562 Homo sapiens GI50 n.a. 5.0 nM PMID[507136]
NPT112 Cell Line MOLT-4 Homo sapiens GI50 n.a. 5.0 nM PMID[507136]
NPT377 Cell Line OVCAR-3 Homo sapiens GI50 n.a. 5.0 nM PMID[507136]
NPT379 Cell Line HOP-62 Homo sapiens GI50 n.a. 5.0 nM PMID[507136]
NPT378 Cell Line NCI/ADR-RES Homo sapiens GI50 n.a. 5.0 nM PMID[507136]
NPT380 Cell Line U-251 Homo sapiens GI50 n.a. 5.0 nM PMID[507136]
NPT381 Cell Line OVCAR-8 Homo sapiens GI50 n.a. 5.0 nM PMID[507136]
NPT382 Cell Line OVCAR-5 Homo sapiens GI50 n.a. 23.23 nM PMID[507136]
NPT383 Cell Line SNB-19 Homo sapiens GI50 n.a. 5.0 nM PMID[507136]
NPT572 Cell Line DMS-273 Homo sapiens GI50 n.a. 5.0 nM PMID[507136]
NPT573 Cell Line M19-MEL Homo sapiens GI50 n.a. 5.0 nM PMID[507136]
NPT323 Cell Line SW-620 Homo sapiens GI50 n.a. 7.345 nM PMID[507136]
NPT455 Cell Line NCI-H522 Homo sapiens GI50 n.a. 1.718 nM PMID[507136]
NPT386 Cell Line KM12 Homo sapiens GI50 n.a. 5.0 nM PMID[507136]
NPT574 Cell Line XF498 Homo sapiens GI50 n.a. 23.23 nM PMID[507136]
NPT388 Cell Line NCI-H322M Homo sapiens GI50 n.a. 5.0 nM PMID[507136]
NPT389 Cell Line RPMI-8226 Homo sapiens GI50 n.a. 5.0 nM PMID[507136]
NPT456 Cell Line OVCAR-4 Homo sapiens GI50 n.a. 5.0 nM PMID[507136]
NPT390 Cell Line LOX IMVI Homo sapiens GI50 n.a. 5.0 nM PMID[507136]
NPT168 Cell Line P388 Mus musculus GI50 n.a. 5.0 nM PMID[507136]
NPT147 Cell Line SK-MEL-2 Homo sapiens GI50 n.a. 5.0 nM PMID[507136]
NPT81 Cell Line A549 Homo sapiens GI50 n.a. 5.0 nM PMID[507136]
NPT575 Cell Line KM-20L2 Homo sapiens GI50 n.a. 5.0 nM PMID[507136]
NPT391 Cell Line HCC 2998 Homo sapiens GI50 n.a. 5.0 nM PMID[507136]
NPT392 Cell Line SNB-75 Homo sapiens GI50 n.a. 1.607 nM PMID[507136]
NPT393 Cell Line HCT-116 Homo sapiens GI50 n.a. 5.0 nM PMID[507136]
NPT148 Cell Line HCT-15 Homo sapiens GI50 n.a. 18.62 nM PMID[507136]
NPT395 Cell Line SF-268 Homo sapiens GI50 n.a. 1.671 nM PMID[507136]
NPT83 Cell Line MCF7 Homo sapiens GI50 n.a. 5.0 nM PMID[507136]
NPT394 Cell Line EKVX Homo sapiens GI50 n.a. 5.0 nM PMID[507136]
NPT576 Cell Line DMS-114 Homo sapiens GI50 n.a. 5.0 nM PMID[507136]
NPT397 Cell Line NCI-H460 Homo sapiens GI50 n.a. 5.0 nM PMID[507136]
NPT146 Cell Line SK-OV-3 Homo sapiens GI50 n.a. 5.0 nM PMID[507136]
NPT398 Cell Line UACC-62 Homo sapiens GI50 n.a. 5.0 nM PMID[507136]
NPT552 Cell Line P388/ADR Mus musculus GI50 n.a. 5.0 nM PMID[507136]
NPT308 Cell Line CAKI-1 Homo sapiens GI50 n.a. 5.0 nM PMID[507136]
NPT458 Cell Line IGROV-1 Homo sapiens GI50 n.a. 5.0 nM PMID[507136]
NPT399 Cell Line SF-295 Homo sapiens GI50 n.a. 5.0 nM PMID[507136]
NPT578 Cell Line SNB-78 Homo sapiens GI50 n.a. 5.0 nM PMID[507136]
NPT403 Cell Line UACC-257 Homo sapiens GI50 n.a. 16.14 nM PMID[507136]
NPT579 Cell Line DLD-1 Homo sapiens GI50 n.a. 5.0 nM PMID[507136]
NPT404 Cell Line CCRF-CEM Homo sapiens GI50 n.a. 5.0 nM PMID[507136]
NPT405 Cell Line NCI-H226 Homo sapiens GI50 n.a. 5.0 nM PMID[507136]
NPT139 Cell Line HT-29 Homo sapiens GI50 n.a. 5.0 nM PMID[507136]
NPT170 Cell Line SK-MEL-28 Homo sapiens GI50 n.a. 1.69 nM PMID[507136]
NPT407 Cell Line COLO 205 Homo sapiens GI50 n.a. 5.0 nM PMID[507136]
NPT406 Cell Line RXF 393 Homo sapiens GI50 n.a. 1.472 nM PMID[507136]
NPT732 Cell Line HOP-18 Homo sapiens GI50 n.a. 5.0 nM PMID[507136]
NPT738 Cell Line SN12K1 Homo sapiens GI50 n.a. 5.0 nM PMID[507136]
NPT180 Cell Line HCT-8 Homo sapiens IC50 = 1.91 nM PMID[507137]
NPT171 Cell Line MRC5 Homo sapiens IC50 = 14.0 nM PMID[507137]
NPT3377 Cell Line PC-9 IC50 = 5.5 nM PMID[507137]
NPT81 Cell Line A549 Homo sapiens IC50 = 1.9 nM PMID[507137]
NPT91 Cell Line KB Homo sapiens IC50 = 1.51 nM PMID[507137]
NPT90 Cell Line DU-145 Homo sapiens IC50 = 1.59 nM PMID[507137]
NPT81 Cell Line A549 Homo sapiens IC50 = 1.38 nM PMID[507137]
NPT81 Cell Line A549 Homo sapiens IC50 = 1.9 nM PMID[507139]
NPT1083 Cell Line A-375 Homo sapiens IC50 = 1.2 nM PMID[507139]
NPT82 Cell Line MDA-MB-231 Homo sapiens IC50 = 0.89 nM PMID[507140]
NPT306 Cell Line PC-3 Homo sapiens IC50 = 2.55 nM PMID[507140]
NPT308 Cell Line CAKI-1 Homo sapiens IC50 = 0.86 nM PMID[507140]
NPT393 Cell Line HCT-116 Homo sapiens IC50 = 1.04 nM PMID[507140]
NPT81 Cell Line A549 Homo sapiens IC50 = 0.94 nM PMID[507140]
NPT308 Cell Line CAKI-1 Homo sapiens Activity = 66.5 % PMID[507140]
NPT308 Cell Line CAKI-1 Homo sapiens Activity = 8.1 % PMID[507140]
NPT308 Cell Line CAKI-1 Homo sapiens Activity = 24.3 % PMID[507140]
NPT308 Cell Line CAKI-1 Homo sapiens Activity = 1.1 % PMID[507140]
NPT21802 PROTEIN FAMILY Hypoxia inducible factors; HIF-1-alpha, HIF-2-alpha Homo sapiens IC50 = 8.7 nM PMID[507133]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. IC50 = 6.8 nM PMID[507137]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. IC50 = 1.8 nM PMID[507137]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. IC50 = 5.0 nM PMID[507137]
NPT992 Organism Entamoeba histolytica Entamoeba histolytica IC50 = 0.031 ug.mL-1 PMID[507138]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. IC50 = 0.7 nM PMID[507139]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. IC50 = 2.6 nM PMID[507139]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. IC50 = 0.83 nM PMID[507140]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. IC50 = 1.26 nM PMID[507140]
NPT32 Organism Mus musculus Mus musculus Cmax = 0.0758 ug.mL-1 PMID[507140]
NPT32 Organism Mus musculus Mus musculus AUC = 53.2 ng.hr.mL-1 PMID[507140]
NPT32 Organism Mus musculus Mus musculus Vdss = 16.3 L.kg-1 PMID[507140]
NPT32 Organism Mus musculus Mus musculus T1/2 = 0.9 hr PMID[507140]
NPT32 Organism Mus musculus Mus musculus CL = 316.67 mL.min-1.kg-1 PMID[507140]
NPT32 Organism Mus musculus Mus musculus F = 9.9 % PMID[507140]
NPT32 Organism Mus musculus Mus musculus AUC = 52.7 ng.hr.mL-1 PMID[507140]
NPT35 Others n.a. Solubility < 1.0 ug.mL-1 PMID[507140]
NPT35 Others n.a. Solubility = 160.0 ug.mL-1 PMID[507140]
NPT191 Organism Hepatitis C virus Hepatitis C virus EC50 = 0.6 nM PMID[507141]
NPT2 Others Unspecified IC50 = 2.0 nM PMID[507141]
NPT27 Others Unspecified Ratio IC50/EC50 = 3.33 n.a. PMID[507141]
NPT963 Organism Hepatitis B virus Hepatitis B virus EC10 > 30.0 nM PMID[507141]
NPT24647 CELL-LINE HepG2 2.2.15 Homo sapiens IC50 = 6.3 nM PMID[507141]

☑ Note for Activity Records:
☉ The quantitative biological activities were primarily integrated from ChEMBL (Version-30) database and were also directly collected from PubMed literature. PubMed PMID was provided as the reference link for each activity record.

  Chemically structural similarity: I. Similar Active Natural Products in NPASS

Top-200 similar NPs were calculated against the active-NP-set (includes 4,3285 NPs with experimentally-derived bioactivity available in NPASS)

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC144863 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
0.9857 High Similarity NPC92541
0.9574 High Similarity NPC253883
0.9574 High Similarity NPC90844
0.9574 High Similarity NPC95075
0.9441 High Similarity NPC219162
0.9247 High Similarity NPC26601
0.9236 High Similarity NPC130941
0.9122 High Similarity NPC76079
0.9079 High Similarity NPC169743
0.9048 High Similarity NPC326316
0.9048 High Similarity NPC81733
0.9021 High Similarity NPC136860
0.9021 High Similarity NPC128019
0.9021 High Similarity NPC476567
0.8993 High Similarity NPC244112
0.8944 High Similarity NPC314682
0.8904 High Similarity NPC16107
0.8904 High Similarity NPC476144
0.8904 High Similarity NPC51957
0.8904 High Similarity NPC106295
0.8904 High Similarity NPC210437
0.8881 High Similarity NPC213206
0.8881 High Similarity NPC474915
0.8881 High Similarity NPC328750
0.8881 High Similarity NPC188163
0.8844 High Similarity NPC7467
0.8808 High Similarity NPC186063
0.8808 High Similarity NPC247639
0.8808 High Similarity NPC25084
0.8766 High Similarity NPC233650
0.875 High Similarity NPC470925
0.875 High Similarity NPC476572
0.8742 High Similarity NPC99659
0.8742 High Similarity NPC325871
0.871 High Similarity NPC134858
0.8693 High Similarity NPC477080
0.8684 High Similarity NPC126519
0.8684 High Similarity NPC170503
0.8684 High Similarity NPC203784
0.8639 High Similarity NPC185838
0.8636 High Similarity NPC306902
0.8636 High Similarity NPC232924
0.8636 High Similarity NPC166014
0.8636 High Similarity NPC160298
0.8636 High Similarity NPC27410
0.8636 High Similarity NPC477559
0.8636 High Similarity NPC266753
0.86 High Similarity NPC220858
0.86 High Similarity NPC151895
0.86 High Similarity NPC192768
0.86 High Similarity NPC88249
0.86 High Similarity NPC97221
0.8599 High Similarity NPC210140
0.8599 High Similarity NPC150879
0.8581 High Similarity NPC60186
0.8526 High Similarity NPC475393
0.8523 High Similarity NPC321505
0.8523 High Similarity NPC179825
0.8523 High Similarity NPC476151
0.8523 High Similarity NPC191376
0.8497 Intermediate Similarity NPC189266
0.8497 Intermediate Similarity NPC276588
0.8497 Intermediate Similarity NPC2413
0.8497 Intermediate Similarity NPC138487
0.8497 Intermediate Similarity NPC278799
0.8497 Intermediate Similarity NPC249797
0.8497 Intermediate Similarity NPC5238
0.8497 Intermediate Similarity NPC127674
0.8497 Intermediate Similarity NPC469817
0.8497 Intermediate Similarity NPC204828
0.8497 Intermediate Similarity NPC80129
0.8497 Intermediate Similarity NPC187022
0.8497 Intermediate Similarity NPC54379
0.8497 Intermediate Similarity NPC184026
0.8497 Intermediate Similarity NPC193949
0.8497 Intermediate Similarity NPC172765
0.8497 Intermediate Similarity NPC41178
0.8497 Intermediate Similarity NPC216459
0.8497 Intermediate Similarity NPC207757
0.8497 Intermediate Similarity NPC295691
0.8497 Intermediate Similarity NPC110416
0.8497 Intermediate Similarity NPC39701
0.8487 Intermediate Similarity NPC233029
0.8487 Intermediate Similarity NPC210148
0.8471 Intermediate Similarity NPC225774
0.8467 Intermediate Similarity NPC246587
0.8467 Intermediate Similarity NPC135538
0.8467 Intermediate Similarity NPC475959
0.8467 Intermediate Similarity NPC147390
0.8467 Intermediate Similarity NPC428
0.8467 Intermediate Similarity NPC476571
0.8467 Intermediate Similarity NPC24233
0.8442 Intermediate Similarity NPC146288
0.844 Intermediate Similarity NPC160193
0.8418 Intermediate Similarity NPC317272
0.8418 Intermediate Similarity NPC268503
0.8418 Intermediate Similarity NPC42549
0.8418 Intermediate Similarity NPC240841
0.8418 Intermediate Similarity NPC24264
0.8418 Intermediate Similarity NPC219341
0.8418 Intermediate Similarity NPC256012
0.8418 Intermediate Similarity NPC250846
0.8418 Intermediate Similarity NPC476432
0.8411 Intermediate Similarity NPC44869
0.8411 Intermediate Similarity NPC103379
0.8411 Intermediate Similarity NPC477565
0.8408 Intermediate Similarity NPC324144
0.8389 Intermediate Similarity NPC145304
0.8377 Intermediate Similarity NPC123323
0.8365 Intermediate Similarity NPC298979
0.8365 Intermediate Similarity NPC158376
0.8365 Intermediate Similarity NPC12053
0.8365 Intermediate Similarity NPC117188
0.8365 Intermediate Similarity NPC81218
0.8365 Intermediate Similarity NPC205421
0.8365 Intermediate Similarity NPC247389
0.8365 Intermediate Similarity NPC306555
0.8365 Intermediate Similarity NPC145832
0.8365 Intermediate Similarity NPC474931
0.8354 Intermediate Similarity NPC302527
0.8354 Intermediate Similarity NPC306843
0.8354 Intermediate Similarity NPC196447
0.8354 Intermediate Similarity NPC253043
0.8354 Intermediate Similarity NPC96603
0.8354 Intermediate Similarity NPC16805
0.8354 Intermediate Similarity NPC477563
0.8354 Intermediate Similarity NPC167546
0.8354 Intermediate Similarity NPC13504
0.8354 Intermediate Similarity NPC212794
0.8354 Intermediate Similarity NPC136508
0.8354 Intermediate Similarity NPC78222
0.8333 Intermediate Similarity NPC216816
0.8323 Intermediate Similarity NPC31311
0.8323 Intermediate Similarity NPC234392
0.8322 Intermediate Similarity NPC118419
0.8313 Intermediate Similarity NPC241055
0.8302 Intermediate Similarity NPC476573
0.8302 Intermediate Similarity NPC35627
0.8302 Intermediate Similarity NPC304659
0.8302 Intermediate Similarity NPC81247
0.8302 Intermediate Similarity NPC86144
0.8301 Intermediate Similarity NPC476579
0.8301 Intermediate Similarity NPC476568
0.8298 Intermediate Similarity NPC172403
0.8291 Intermediate Similarity NPC1229
0.8289 Intermediate Similarity NPC60538
0.8289 Intermediate Similarity NPC207824
0.8272 Intermediate Similarity NPC285941
0.8267 Intermediate Similarity NPC130926
0.8264 Intermediate Similarity NPC325568
0.8253 Intermediate Similarity NPC302275
0.825 Intermediate Similarity NPC210918
0.8247 Intermediate Similarity NPC470924
0.8239 Intermediate Similarity NPC168409
0.8217 Intermediate Similarity NPC221864
0.8217 Intermediate Similarity NPC111485
0.821 Intermediate Similarity NPC227060
0.821 Intermediate Similarity NPC10908
0.821 Intermediate Similarity NPC317145
0.821 Intermediate Similarity NPC198498
0.821 Intermediate Similarity NPC76682
0.821 Intermediate Similarity NPC317439
0.821 Intermediate Similarity NPC276890
0.821 Intermediate Similarity NPC115284
0.821 Intermediate Similarity NPC63646
0.8182 Intermediate Similarity NPC76213
0.8182 Intermediate Similarity NPC277669
0.8176 Intermediate Similarity NPC189470
0.8171 Intermediate Similarity NPC287588
0.817 Intermediate Similarity NPC211296
0.8165 Intermediate Similarity NPC119649
0.8165 Intermediate Similarity NPC235143
0.8165 Intermediate Similarity NPC230956
0.8165 Intermediate Similarity NPC205255
0.8165 Intermediate Similarity NPC271388
0.8163 Intermediate Similarity NPC253429
0.816 Intermediate Similarity NPC12424
0.816 Intermediate Similarity NPC129518
0.816 Intermediate Similarity NPC251580
0.816 Intermediate Similarity NPC41376
0.8153 Intermediate Similarity NPC79328
0.8151 Intermediate Similarity NPC11147
0.8148 Intermediate Similarity NPC168753
0.8148 Intermediate Similarity NPC118274
0.8137 Intermediate Similarity NPC204947
0.8125 Intermediate Similarity NPC4138
0.8125 Intermediate Similarity NPC121275
0.8125 Intermediate Similarity NPC276944
0.8125 Intermediate Similarity NPC284183
0.8125 Intermediate Similarity NPC238530
0.8125 Intermediate Similarity NPC232514
0.8113 Intermediate Similarity NPC80759
0.8113 Intermediate Similarity NPC79402
0.8101 Intermediate Similarity NPC7393
0.8098 Intermediate Similarity NPC475215
0.8098 Intermediate Similarity NPC239775
0.8098 Intermediate Similarity NPC108434
0.8098 Intermediate Similarity NPC149090
0.8098 Intermediate Similarity NPC19520
0.8095 Intermediate Similarity NPC16357

  Chemically structural similarity: II. Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC144863 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.8904 High Similarity NPD4584 Approved
0.8881 High Similarity NPD4664 Clinical (unspecified phase)
0.8497 Intermediate Similarity NPD7298 Approved
0.8408 Intermediate Similarity NPD7201 Clinical (unspecified phase)
0.8301 Intermediate Similarity NPD4017 Approved
0.8289 Intermediate Similarity NPD3641 Approved
0.8289 Intermediate Similarity NPD3639 Approved
0.8289 Intermediate Similarity NPD3640 Phase 3
0.8264 Intermediate Similarity NPD3109 Approved
0.8264 Intermediate Similarity NPD3110 Approved
0.8212 Intermediate Similarity NPD7598 Phase 2
0.821 Intermediate Similarity NPD8252 Approved
0.821 Intermediate Similarity NPD8099 Discontinued
0.821 Intermediate Similarity NPD8251 Approved
0.8163 Intermediate Similarity NPD6028 Clinical (unspecified phase)
0.8163 Intermediate Similarity NPD6029 Clinical (unspecified phase)
0.816 Intermediate Similarity NPD8156 Discontinued
0.8125 Intermediate Similarity NPD6812 Clinical (unspecified phase)
0.8125 Intermediate Similarity NPD5718 Phase 2
0.8089 Intermediate Similarity NPD6818 Clinical (unspecified phase)
0.8077 Intermediate Similarity NPD4773 Phase 2
0.8077 Intermediate Similarity NPD4772 Phase 2
0.8069 Intermediate Similarity NPD4474 Approved
0.8069 Intermediate Similarity NPD4475 Approved
0.8052 Intermediate Similarity NPD6031 Approved
0.8052 Intermediate Similarity NPD6030 Approved
0.7987 Intermediate Similarity NPD6788 Approved
0.7974 Intermediate Similarity NPD2420 Approved
0.7974 Intermediate Similarity NPD2421 Approved
0.7974 Intermediate Similarity NPD3124 Discontinued
0.7961 Intermediate Similarity NPD5241 Discontinued
0.7937 Intermediate Similarity NPD7831 Phase 2
0.7937 Intermediate Similarity NPD7833 Phase 2
0.7937 Intermediate Similarity NPD7832 Clinical (unspecified phase)
0.7931 Intermediate Similarity NPD2669 Clinical (unspecified phase)
0.7901 Intermediate Similarity NPD7802 Discontinued
0.7881 Intermediate Similarity NPD7045 Clinical (unspecified phase)
0.787 Intermediate Similarity NPD8053 Approved
0.787 Intermediate Similarity NPD8054 Approved
0.7862 Intermediate Similarity NPD5752 Clinical (unspecified phase)
0.7843 Intermediate Similarity NPD5084 Clinical (unspecified phase)
0.7812 Intermediate Similarity NPD5978 Approved
0.7812 Intermediate Similarity NPD5977 Approved
0.7792 Intermediate Similarity NPD6783 Clinical (unspecified phase)
0.7792 Intermediate Similarity NPD3845 Phase 1
0.7764 Intermediate Similarity NPD4581 Clinical (unspecified phase)
0.7733 Intermediate Similarity NPD6896 Approved
0.7733 Intermediate Similarity NPD6895 Approved
0.7727 Intermediate Similarity NPD5307 Clinical (unspecified phase)
0.7722 Intermediate Similarity NPD7261 Clinical (unspecified phase)
0.7708 Intermediate Similarity NPD7258 Clinical (unspecified phase)
0.7683 Intermediate Similarity NPD6107 Approved
0.7667 Intermediate Similarity NPD4579 Clinical (unspecified phase)
0.7662 Intermediate Similarity NPD6748 Discontinued
0.7651 Intermediate Similarity NPD2898 Approved
0.7647 Intermediate Similarity NPD8453 Clinical (unspecified phase)
0.7639 Intermediate Similarity NPD1669 Approved
0.7636 Intermediate Similarity NPD3051 Approved
0.7636 Intermediate Similarity NPD4010 Discontinued
0.7636 Intermediate Similarity NPD4166 Phase 2
0.7635 Intermediate Similarity NPD7294 Phase 1
0.7633 Intermediate Similarity NPD6996 Clinical (unspecified phase)
0.7605 Intermediate Similarity NPD5602 Clinical (unspecified phase)
0.7561 Intermediate Similarity NPD7400 Phase 3
0.7485 Intermediate Similarity NPD2970 Approved
0.7485 Intermediate Similarity NPD2969 Approved
0.7484 Intermediate Similarity NPD4727 Phase 1
0.7484 Intermediate Similarity NPD5177 Phase 3
0.7452 Intermediate Similarity NPD2422 Clinical (unspecified phase)
0.745 Intermediate Similarity NPD5156 Approved
0.745 Intermediate Similarity NPD5155 Approved
0.744 Intermediate Similarity NPD4481 Phase 3
0.744 Intermediate Similarity NPD2489 Approved
0.744 Intermediate Similarity NPD27 Approved
0.7436 Intermediate Similarity NPD6658 Clinical (unspecified phase)
0.7429 Intermediate Similarity NPD7291 Discontinued
0.7419 Intermediate Similarity NPD7037 Approved
0.7412 Intermediate Similarity NPD5313 Approved
0.7412 Intermediate Similarity NPD5312 Approved
0.7407 Intermediate Similarity NPD7109 Clinical (unspecified phase)
0.7407 Intermediate Similarity NPD7110 Phase 1
0.7399 Intermediate Similarity NPD5917 Clinical (unspecified phase)
0.7389 Intermediate Similarity NPD3301 Approved
0.7383 Intermediate Similarity NPD3595 Approved
0.7383 Intermediate Similarity NPD2606 Approved
0.7383 Intermediate Similarity NPD3594 Approved
0.7383 Intermediate Similarity NPD2605 Approved
0.7381 Intermediate Similarity NPD6688 Approved
0.7381 Intermediate Similarity NPD6687 Approved
0.7375 Intermediate Similarity NPD1914 Approved
0.7375 Intermediate Similarity NPD5976 Discontinued
0.7362 Intermediate Similarity NPD7945 Clinical (unspecified phase)
0.7361 Intermediate Similarity NPD2667 Approved
0.7361 Intermediate Similarity NPD2668 Approved
0.7358 Intermediate Similarity NPD1754 Clinical (unspecified phase)
0.7357 Intermediate Similarity NPD5283 Phase 1
0.7348 Intermediate Similarity NPD8095 Phase 1
0.7342 Intermediate Similarity NPD7124 Phase 2
0.7337 Intermediate Similarity NPD6607 Clinical (unspecified phase)
0.7326 Intermediate Similarity NPD6297 Approved
0.7325 Intermediate Similarity NPD3977 Clinical (unspecified phase)
0.7325 Intermediate Similarity NPD6331 Phase 2
0.7321 Intermediate Similarity NPD6071 Discontinued
0.7315 Intermediate Similarity NPD3637 Approved
0.7315 Intermediate Similarity NPD3636 Approved
0.7315 Intermediate Similarity NPD3635 Approved
0.7312 Intermediate Similarity NPD5261 Clinical (unspecified phase)
0.7312 Intermediate Similarity NPD6090 Discontinued
0.7301 Intermediate Similarity NPD7438 Suspended
0.7292 Intermediate Similarity NPD4093 Discontinued
0.7278 Intermediate Similarity NPD7667 Clinical (unspecified phase)
0.7273 Intermediate Similarity NPD2560 Approved
0.7273 Intermediate Similarity NPD2563 Approved
0.7273 Intermediate Similarity NPD7718 Clinical (unspecified phase)
0.7267 Intermediate Similarity NPD6662 Clinical (unspecified phase)
0.7267 Intermediate Similarity NPD7427 Discontinued
0.7267 Intermediate Similarity NPD2122 Discontinued
0.7261 Intermediate Similarity NPD4237 Approved
0.7261 Intermediate Similarity NPD4236 Phase 3
0.7257 Intermediate Similarity NPD6618 Phase 2
0.7256 Intermediate Similarity NPD5720 Discontinued
0.725 Intermediate Similarity NPD1424 Approved
0.7248 Intermediate Similarity NPD7905 Discontinued
0.7237 Intermediate Similarity NPD3530 Approved
0.7237 Intermediate Similarity NPD3531 Approved
0.7237 Intermediate Similarity NPD3532 Approved
0.7237 Intermediate Similarity NPD2674 Phase 3
0.7219 Intermediate Similarity NPD6747 Phase 1
0.7211 Intermediate Similarity NPD2230 Approved
0.7211 Intermediate Similarity NPD2232 Approved
0.7211 Intermediate Similarity NPD2233 Approved
0.7208 Intermediate Similarity NPD2492 Phase 1
0.72 Intermediate Similarity NPD2971 Approved
0.72 Intermediate Similarity NPD2968 Approved
0.7195 Intermediate Similarity NPD6873 Phase 2
0.7193 Intermediate Similarity NPD5938 Phase 3
0.7186 Intermediate Similarity NPD4055 Discovery
0.7181 Intermediate Similarity NPD4098 Discontinued
0.7172 Intermediate Similarity NPD2594 Approved
0.7172 Intermediate Similarity NPD2595 Approved
0.7171 Intermediate Similarity NPD5110 Phase 2
0.7171 Intermediate Similarity NPD5111 Phase 2
0.7171 Intermediate Similarity NPD5109 Approved
0.717 Intermediate Similarity NPD5160 Discontinued
0.7168 Intermediate Similarity NPD7479 Phase 2
0.7168 Intermediate Similarity NPD3920 Phase 2
0.7162 Intermediate Similarity NPD1421 Approved
0.7162 Intermediate Similarity NPD1420 Approved
0.7161 Intermediate Similarity NPD6111 Discontinued
0.7159 Intermediate Similarity NPD6851 Approved
0.7159 Intermediate Similarity NPD6853 Approved
0.7152 Intermediate Similarity NPD3060 Approved
0.7152 Intermediate Similarity NPD4162 Approved
0.7143 Intermediate Similarity NPD7034 Discontinued
0.7135 Intermediate Similarity NPD7906 Approved
0.7134 Intermediate Similarity NPD6876 Approved
0.7134 Intermediate Similarity NPD6875 Approved
0.7133 Intermediate Similarity NPD6584 Phase 3
0.7125 Intermediate Similarity NPD6066 Clinical (unspecified phase)
0.7124 Intermediate Similarity NPD554 Clinical (unspecified phase)
0.7115 Intermediate Similarity NPD4108 Discontinued
0.7107 Intermediate Similarity NPD5754 Discontinued
0.7103 Intermediate Similarity NPD6581 Approved
0.7103 Intermediate Similarity NPD6580 Approved
0.7102 Intermediate Similarity NPD7310 Approved
0.7102 Intermediate Similarity NPD3534 Clinical (unspecified phase)
0.7102 Intermediate Similarity NPD7313 Approved
0.7102 Intermediate Similarity NPD4577 Approved
0.7102 Intermediate Similarity NPD4578 Approved
0.7102 Intermediate Similarity NPD7311 Approved
0.7102 Intermediate Similarity NPD7312 Approved
0.7099 Intermediate Similarity NPD3647 Clinical (unspecified phase)
0.7097 Intermediate Similarity NPD2986 Phase 2
0.7097 Intermediate Similarity NPD2989 Phase 2
0.7083 Intermediate Similarity NPD5604 Discontinued
0.7073 Intermediate Similarity NPD6523 Clinical (unspecified phase)
0.7073 Intermediate Similarity NPD4005 Discontinued
0.7062 Intermediate Similarity NPD7309 Approved
0.7059 Intermediate Similarity NPD1039 Discontinued
0.7059 Intermediate Similarity NPD3145 Approved
0.7059 Intermediate Similarity NPD3144 Approved
0.7055 Intermediate Similarity NPD3445 Approved
0.7055 Intermediate Similarity NPD1651 Approved
0.7055 Intermediate Similarity NPD6382 Discontinued
0.7055 Intermediate Similarity NPD6830 Clinical (unspecified phase)
0.7055 Intermediate Similarity NPD3444 Approved
0.7055 Intermediate Similarity NPD3443 Approved
0.7045 Intermediate Similarity NPD7132 Clinical (unspecified phase)
0.7044 Intermediate Similarity NPD44 Approved
0.7044 Intermediate Similarity NPD6364 Approved
0.7041 Intermediate Similarity NPD5709 Phase 3
0.7037 Intermediate Similarity NPD4123 Phase 3
0.703 Intermediate Similarity NPD1337 Clinical (unspecified phase)
0.7025 Intermediate Similarity NPD5865 Clinical (unspecified phase)
0.7025 Intermediate Similarity NPD7030 Discontinued
0.7022 Intermediate Similarity NPD5087 Clinical (unspecified phase)
0.702 Intermediate Similarity NPD7018 Phase 2
0.702 Intermediate Similarity NPD2990 Approved
0.702 Intermediate Similarity NPD2987 Approved
0.702 Intermediate Similarity NPD7247 Discontinued

  Bioactivity similarity: Similar Natural Products in NPASS

Bioactivity similarity was calculated based on bioactivity descriptors of compounds. The bioactivity descriptors were calculated by a recently developed AI algorithm Chemical Checker (CC) [Nature Biotechnology, 38:1087–1096, 2020; Nature Communications, 12:3932, 2021], which evaluated bioactivity similarities at five levels:
A: chemistry similarity;
B: biological targets similarity;
C: networks similarity;
D: cell-based bioactivity similarity;
E: similarity based on clinical data.

Those 5 categories of CC bioactivity descriptors were calculated and then subjected to manifold projection using UMAP algorithm, to project all NPs on a 2-Dimensional space. The current NP was highlighted with a small circle in the 2-D map. Below figures: left-to-right, A-to-E.

A: chemistry similarity
B: biological targets similarity
C: networks similarity
D: cell-based bioactivity similarity
E: similarity based on clinical data