Natural Product: NPC123229| Natural Product ID | NPC123229 |
|
Common Name
The InCHIKey will be temporarily assigned as the "Common Name" if no IUPAC name or alternative short name is available.
| AYXPYQRXGNDJFU-UJJIHBOXSA-N |
| IUPAC Name | n.a. |
| Synonyms | |
| Synthetic Gene Cluster | n.a. |
| ChEMBL Identifier | n.a. |
| PubChem CID |
6432543 |
| Chemical Classification |
|
The Chemical Classification was calculated by Classyfire, a software for chemical taxonomy calculation. Reference: DOI:10.1186/s13321-016-0174-y.
Chemical Representations
| Standard InCHIKey | AYXPYQRXGNDJFU-UJJIHBOXSA-N |
| Standard InCHI | InChI=1S/C15H26O/c1-9-5-6-10-12(9)13-11(14(13,2)3)7-8-15(10,4)16/h9-13,16H,5-8H2,1-4H3/t9-,10?,11?,12?,13?,15+/m0/s1 |
| SMILES | C[C@H]1CCC2C1C1C(CC[C@@]2(C)O)C1(C)C |
  Calculated Properties| Molecular Weight:   | 222.2 | Volume:   | 251.117 Van der Waals volume.
|
| Dense:   | 0.885 | LogP:   | 4.032 The logarithm of the n-octanol/water distribution coefficients.
|
| logD7.4:   | 3.751 The logarithm of the n-octanol/water distribution coefficient at pH=7.4.
|
LogS:   | -3.842 The logarithm of aqueous solubility value.
|
| Rotatable Bonds:   | 0.0 | Rigid Bonds:   | 13.0 |
| TPSA:   | 20.23 Topological Polar Surface Area.
|
H-Bond Acceptor:   | 1.0 |
| H-Bond Donor:   | 1.0 | Rings:   | 3.0 |
| Heavy Atoms:   | 1.0 |
| QED Drug-Likeness Score:   | 0.665 | GASA:   | 1.0 GASA represents the probability of being difficult to synthesize, ranging from 0 to 1.
|
| Synthetic Accessibility Score:   | 4.218 | Fsp3:   | 1.0 |
| MCE-18:   | 54.667 MCE-18 stands for medicinal chemistry evolution.MCE-18≥45 is considered a suitable value.
|
Lipinski Rule-of-5:   | Rejected |
| Pfizer Rule:   | Accepted | GSK Rule:   | Accepted |
| Golden Triangle Rule:   | Rejected | BMS Rule:   | 0 |
| Chelating Alert:   | 0 | PAINS Alert:   | 0 |
| Colloidal aggregators:   | 0.017 | Fluc inhibitor:   | 0.007 The fluc inhibitor value is the probability of being fLuc inhibitors, within the range of 0 to 1.
|
| Blue fluorescence:   | 0.031 The blue fluorescence value is the probability of being blue fluorescence, within the range of 0 to 1
|
Green fluorescence:   | 0.003 The green fluorescence value is the probability of being green fluorescence, within the range of 0 to 1
|
| Reactive compounds:   | 0.625 | Promiscuous compounds:   | 0.515 |
| Caco-2 Permeability:   | -4.947 | MDCK Permeability:   | -4.955 |
| Pgp-inhibitor:   | 0.943 | Pgp-substrate:   | 0.015 |
| PAMPA:   |
0.103 The experimental data for Peff was logarithmically transformed (logPeff). Molecules with log Peff values below 2.0 were classified as low-permeability (Category 0), while those with log Peff values exceeding 2.5 were classified as high-permeability (Category 1).
|
Human Intestinal Absorption (HIA):   | 0.001 |
| 20% Bioavailability (F20%):   | 0.123 | 30% Bioavailability (F30%):   | 0.088 |
| 50% Bioavailability (F50%):   | 0.657 |
| Blood-Brain-Barrier Penetration (BBB):   | 0.123 | MRP1:   | 0.67 |
| Plasma Protein Binding (PPB):   | 92.73% | Volume Distribution (VD):   | 0.144 |
| Fu: |
9.213% The fraction unbound in plasms.
|
OATP1B1 inhibitor:   | 1.0 |
| OATP1B3 inhibitor:   | 0.991 | BCRP inhibitor:   | 0.124 |
| BSEP inhibitor:   | 0.992 |
| CYP1A2-inhibitor:   | 0.077 | CYP1A2-substrate:   | 0.034 |
| CYP2C19-inhibitor:   | 0.385 | CYP2C19-substrate:   | 0.275 |
| CYP2C9-inhibitor:   | 0.058 | CYP2C9-substrate:   | 0.0 |
| CYP2D6-inhibitor:   | 0.042 | CYP2D6-substrate:   | 0.0 |
| CYP3A4-inhibitor:   | 0.192 | CYP3A4-substrate:   | 0.959 |
| CYP2B6-substrate:   | 0.204 | CYP2C8-inhibitor:   | 0.936 |
| HLM stability:   |
0.117 Human liver microsomal (HLM) stability. Category 0: stable+ (HLM > 30 min); Category 1: unstable- (HLM ≤ 30 min). The output value is the probability of human liver microsomal instability, where a value closer to 1 indicates a higher likelihood of instability.
|
| Clearance (CL):   | 14.059 | Half-life (T1/2):   | 1.433 |
| hERG Blockers:   | 0.057 | hERG Blockers (10um):   | 0.321 |
| Human Hepatotoxicity (H-HT):   | 0.55 | Drug-induced Liver Injury (DILI):   | 0.075 |
| AMES Toxicity:   | 0.249 | Rat Oral Acute Toxicity:   | 0.114 |
| Maximum Recommended Daily Dose:   | 0.439 | Skin Sensitization:   | 0.395 |
| Carcinogencity:   | 0.73 | Eye Corrosion:   | 0.56 |
| Eye Irritation:   | 0.976 | Respiratory Toxicity:   | 0.448 |
| Drug-induced Neurotoxicity:   | 0.078 | Ototoxicity:   | 0.542 |
| Hematotoxicity:   | 0.179 | Drug-induced Nephrotoxicity:   | 0.284 |
| Genotoxicity:   | 0.001 | RPMI-8226 Immunitoxicity:   | 0.033 |
| A549 Cytotoxicity:   | 0.153 | Hek293 Cytotoxicity:   | 0.251 |
| BCF:   |
2.411 Bioconcentration factors are used for considering secondary poisoning potential and assessing risks to human health via the food chain. The unit is -log10[(mg/L)/(1000*MW)].
|
IGC50:   |
4.052 48 hour Tetrahymena pyriformis IGC50. The unit of IGC50 is -log10[(mg/L)/(1000*MW)].
|
| LC50DM:   |
5.055 48 hour Daphnia magna LC50. The unit of LC50DM is -log10[(mg/L)/(1000*MW)].
|
LC50FM:   |
4.71 96 hour fathead minnow LC50. The unit of LC50FM is -log10[(mg/L)/(1000*MW)].
|
  Species Source| Organism ID | Organism Name | Taxonomy Level | Family | SuperKingdom | Isolation Part | Collection Location | Collection Time | Reference |
|---|---|---|---|---|---|---|---|---|
| NPO26589 | Artemisia annua L. | Strain | Asteraceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[ 21030913] |
| NPO15810 | Zea mays | Species | Poaceae | Eukaryota | n.a. | n.a. | n.a. | DOI[10.1007/BF00714468] |
| NPO4391 | Hypericum perforatum | Species | Hypericaceae | Eukaryota | n.a. | n.a. | n.a. | DOI[10.1007/s11240-015-0798-z] |
| NPO26589 | Artemisia annua L. | Strain | Asteraceae | Eukaryota | n.a. | leaf | n.a. | DOI[10.1007/s11418-006-0112-9] |
| NPO26589 | Artemisia annua L. | Strain | Asteraceae | Eukaryota | n.a. | stem | n.a. | DOI[10.1007/s11418-006-0112-9] |
| NPO26589 | Artemisia annua L. | Strain | Asteraceae | Eukaryota | n.a. | flower | n.a. | DOI[10.1007/s11418-006-0112-9] |
| NPO4391 | Hypericum perforatum | Species | Hypericaceae | Eukaryota | n.a. | n.a. | n.a. | DOI[10.1016/j.fitote.2006.01.011] |
| NPO29401 | Bupleurum chinense | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | DOI[10.1016/j.indcrop.2008.08.002] |
| NPO4391 | Hypericum perforatum | Species | Hypericaceae | Eukaryota | n.a. | n.a. | n.a. | DOI[10.1016/j.jarmap.2018.11.004] |
| NPO29141 | Panax ginseng | Species | Araliaceae | Eukaryota | n.a. | n.a. | n.a. | DOI[10.1016/j.jarmap.2018.11.004] |
| NPO4391 | Hypericum perforatum | Species | Hypericaceae | Eukaryota | n.a. | n.a. | n.a. | DOI[10.1016/j.plaphy.2005.07.013] |
| NPO28295 | Foeniculum vulgare | Species | Apiaceae | Eukaryota | n.a. | leaf | n.a. | DOI[10.1016/S0031-9422(00)94055-X] |
| NPO27288 | Citrus maxima | Species | Rutaceae | Eukaryota | n.a. | n.a. | n.a. | DOI[10.1016/S0031-9422(99)00119-3] |
| NPO15810 | Zea mays | Species | Poaceae | Eukaryota | n.a. | n.a. | DOI[10.1021/jf00055a023] | |
| NPO22741 | Curcuma kwangsiensis | Species | Zingiberaceae | Eukaryota | n.a. | rhizome | n.a. | DOI[10.1021/np100392m] |
| NPO4391 | Hypericum perforatum | Species | Hypericaceae | Eukaryota | n.a. | n.a. | n.a. | DOI[10.1078/0176-1617-00195] |
| NPO4391 | Hypericum perforatum | Species | Hypericaceae | Eukaryota | n.a. | n.a. | n.a. | DOI[10.1155/2014/609649] |
| NPO28295 | Foeniculum vulgare | Species | Apiaceae | Eukaryota | n.a. | flower | n.a. | DOI[10.3390/70200245] |
| NPO4391 | Hypericum perforatum | Species | Hypericaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[10757735] |
| NPO11438 | Angelica gigas | Species | Apiaceae | Eukaryota | n.a. | root | n.a. |
PMID[11374978] |
| NPO15810 | Zea mays | Species | Poaceae | Eukaryota | n.a. | seed | n.a. |
PMID[11539687] |
| NPO26351 | Agastache rugosa | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[11908994] |
| NPO15810 | Zea mays | Species | Poaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[12713418] |
| NPO14602 | Vitex negundo | Species | Lamiaceae | Eukaryota | leaves | n.a. | n.a. |
PMID[12828478] |
| NPO25825 | Saussurea lappa | Species | Asteraceae | Eukaryota | Roots | n.a. | n.a. |
PMID[14510592] |
| NPO4391 | Hypericum perforatum | Species | Hypericaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[14735439] |
| NPO14602 | Vitex negundo | Species | Lamiaceae | Eukaryota | n.a. | root | n.a. |
PMID[15520511] |
| NPO14602 | Vitex negundo | Species | Lamiaceae | Eukaryota | seeds | n.a. | n.a. |
PMID[15620254] |
| NPO11438 | Angelica gigas | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[15679317] |
| NPO4391 | Hypericum perforatum | Species | Hypericaceae | Eukaryota | n.a. | callus | n.a. |
PMID[15715262] |
| NPO14602 | Vitex negundo | Species | Lamiaceae | Eukaryota | seeds | n.a. | n.a. |
PMID[1624939] |
| NPO15462 | Angelica sinensis | Species | Apiaceae | Eukaryota | roots | purchased from Kiu Shun Trading Ltd., Vancouver, Canada | 2000 |
PMID[16643021] |
| NPO14602 | Vitex negundo | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[17027268] |
| NPO11438 | Angelica gigas | Species | Apiaceae | Eukaryota | n.a. | root | n.a. |
PMID[17997069] |
| NPO4682 | Lindera aggregata | Species | Lauraceae | Eukaryota | n.a. | leaf | n.a. |
PMID[17999353] |
| NPO4391 | Hypericum perforatum | Species | Hypericaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[18220354] |
| NPO26351 | Agastache rugosa | Species | Lamiaceae | Eukaryota | n.a. | root | n.a. |
PMID[1823989] |
| NPO29141 | Panax ginseng | Species | Araliaceae | Eukaryota | n.a. | leaf | n.a. |
PMID[18409045] |
| NPO29016 | Valeriana jatamansi | Species | Caprifoliaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[19245261] |
| NPO4682 | Lindera aggregata | Species | Lauraceae | Eukaryota | Roots; Tubers | n.a. | n.a. |
PMID[19639966] |
| NPO14602 | Vitex negundo | Species | Lamiaceae | Eukaryota | Seeds | n.a. | n.a. |
PMID[19715321] |
| NPO29141 | Panax ginseng | Species | Araliaceae | Eukaryota | flower buds | n.a. | n.a. |
PMID[19926279] |
| NPO14602 | Vitex negundo | Species | Lamiaceae | Eukaryota | Seeds | n.a. | n.a. |
PMID[19931461] |
| NPO29016 | Valeriana jatamansi | Species | Caprifoliaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[20151678] |
| NPO8666 | Acorus tatarinowii | Species | Acoraceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[20476749] |
| NPO29016 | Valeriana jatamansi | Species | Caprifoliaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[20853876] |
| NPO22741 | Curcuma kwangsiensis | Species | Zingiberaceae | Eukaryota | Rhizomes | n.a. | n.a. |
PMID[20879743] |
| NPO29141 | Panax ginseng | Species | Araliaceae | Eukaryota | n.a. | root | n.a. |
PMID[2092947] |
| NPO15810 | Zea mays | Species | Poaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[21080643] |
| NPO29141 | Panax ginseng | Species | Araliaceae | Eukaryota | berry | n.a. | n.a. |
PMID[21216145] |
| NPO11100 | Artemisia capillaris | Species | Asteraceae | Eukaryota | n.a. | whole plant | n.a. |
PMID[21428416] |
| NPO15810 | Zea mays | Species | Poaceae | Eukaryota | n.a. | husk | n.a. |
PMID[21574561] |
| NPO15810 | Zea mays | Species | Poaceae | Eukaryota | n.a. | leaf | n.a. |
PMID[21574561] |
| NPO22741 | Curcuma kwangsiensis | Species | Zingiberaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[21807513] |
| NPO11100 | Artemisia capillaris | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[22870812] |
| NPO15810 | Zea mays | Species | Poaceae | Eukaryota | n.a. | seed | n.a. |
PMID[23292602] |
| NPO14602 | Vitex negundo | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[23403897] |
| NPO11100 | Artemisia capillaris | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[23435948] |
| NPO8666 | Acorus tatarinowii | Species | Acoraceae | Eukaryota | n.a. | rhizome | n.a. |
PMID[23713285] |
| NPO2618 | Curcuma wenyujin | Species | Zingiberaceae | Eukaryota | n.a. | root | n.a. |
PMID[23738470] |
| NPO2618 | Curcuma wenyujin | Species | Zingiberaceae | Eukaryota | n.a. | rhizome | n.a. |
PMID[23738470] |
| NPO18068 | Curcuma phaeocaulis | Species | Zingiberaceae | Eukaryota | rhizomes | n.a. | n.a. |
PMID[23755850] |
| NPO29141 | Panax ginseng | Species | Araliaceae | Eukaryota | leaves | n.a. | n.a. |
PMID[24290061] |
| NPO28295 | Foeniculum vulgare | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[24617303] |
| NPO29141 | Panax ginseng | Species | Araliaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[24968750] |
| NPO29141 | Panax ginseng | Species | Araliaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[25152999] |
| NPO2618 | Curcuma wenyujin | Species | Zingiberaceae | Eukaryota | Rhizomes | n.a. | n.a. |
PMID[25275213] |
| NPO15462 | Angelica sinensis | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[25538068] |
| NPO11100 | Artemisia capillaris | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[25737008] |
| NPO29401 | Bupleurum chinense | Species | Apiaceae | Eukaryota | roots | n.a. | n.a. |
PMID[26259802] |
| NPO8666 | Acorus tatarinowii | Species | Acoraceae | Eukaryota | rhizomes | n.a. | n.a. |
PMID[26296476] |
| NPO8666 | Acorus tatarinowii | Species | Acoraceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[26305406] |
| NPO29141 | Panax ginseng | Species | Araliaceae | Eukaryota | stems-leaves | n.a. | n.a. |
PMID[26420067] |
| NPO15462 | Angelica sinensis | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[27400088] |
| NPO29141 | Panax ginseng | Species | Araliaceae | Eukaryota | n.a. | stem | n.a. |
PMID[27914541] |
| NPO29141 | Panax ginseng | Species | Araliaceae | Eukaryota | Flower Buds | n.a. | n.a. |
PMID[28345906] |
| NPO4391 | Hypericum perforatum | Species | Hypericaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[28445039] |
| NPO8666 | Acorus tatarinowii | Species | Acoraceae | Eukaryota | Rhizomes | n.a. | n.a. |
PMID[29116780] |
| NPO15810 | Zea mays | Species | Poaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[29762032] |
| NPO4391 | Hypericum perforatum | Species | Hypericaceae | Eukaryota | Roots | n.a. | n.a. |
PMID[30024167] |
| NPO26351 | Agastache rugosa | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[31747281] |
| NPO29141 | Panax ginseng | Species | Araliaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[32129622] |
| NPO4391 | Hypericum perforatum | Species | Hypericaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[32560389] |
| NPO8666 | Acorus tatarinowii | Species | Acoraceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[32807141] |
| NPO21355 | Elsholtzia ciliata | Species | Lamiaceae | Eukaryota | Aerial Parts | n.a. | n.a. |
PMID[32991171] |
| NPO29016 | Valeriana jatamansi | Species | Caprifoliaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[35481430] |
| NPO25825 | Saussurea lappa | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[3572418] |
| NPO4391 | Hypericum perforatum | Species | Hypericaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[36336219] |
| NPO15462 | Angelica sinensis | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[36838931] |
| NPO27288 | Citrus maxima | Species | Rutaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[37049761] |
| NPO15462 | Angelica sinensis | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[37480748] |
| NPO14602 | Vitex negundo | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[38163555] |
| NPO4391 | Hypericum perforatum | Species | Hypericaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[38217369] |
| NPO26351 | Agastache rugosa | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[38791403] |
| NPO8666 | Acorus tatarinowii | Species | Acoraceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[38821245] |
| NPO26589 | Artemisia annua L. | Strain | Asteraceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[6387056] |
| NPO26351 | Agastache rugosa | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[8594148] |
| NPO15810 | Zea mays | Species | Poaceae | Eukaryota | n.a. | pollen | n.a. |
PMID[8987503] |
| NPO7929 | Curcuma zedoaria | Species | Zingiberaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[9868158] |
| NPO29401 | Bupleurum chinense | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[Article] |
| NPO4391 | Hypericum perforatum | Species | Hypericaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO8650.1 | Perilla frutescens var. arguta | Varieties | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO15810 | Zea mays | Species | Poaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO4682 | Lindera aggregata | Species | Lauraceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO11100 | Artemisia capillaris | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO29401 | Bupleurum chinense | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO27288 | Citrus maxima | Species | Rutaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO22741 | Curcuma kwangsiensis | Species | Zingiberaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO18068 | Curcuma phaeocaulis | Species | Zingiberaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO2618 | Curcuma wenyujin | Species | Zingiberaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO21355 | Elsholtzia ciliata | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO13346 | Lindera strichnifolia | Species | Tineidae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO18046 | Mosla chinensis | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO2921 | Angelica acutiloba | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO11438 | Angelica gigas | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO15462 | Angelica sinensis | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO3107 | Bupleurum falcatum | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO1484 | Bupleurum scorzonerifolium | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO8666 | Acorus tatarinowii | Species | Acoraceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO7929 | Curcuma zedoaria | Species | Zingiberaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO26589 | Artemisia annua L. | Strain | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO10506 | Artemisia apiacea | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO8367 | Fructus schiandrae | n.a. | n.a. | n.a. | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO29141 | Panax ginseng | Species | Araliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO14602 | Vitex negundo | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO29016 | Valeriana jatamansi | Species | Caprifoliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO26351 | Agastache rugosa | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO15810 | Zea mays | Species | Poaceae | Eukaryota | n.a. | n.a. | Database[FooDB] | |
| NPO15810 | Zea mays | Species | Poaceae | Eukaryota | Cob | n.a. | n.a. | Database[FooDB] |
| NPO15810 | Zea mays | Species | Poaceae | Eukaryota | Fruit | n.a. | n.a. | Database[FooDB] |
| NPO15810 | Zea mays | Species | Poaceae | Eukaryota | Husk Essent. Oil | n.a. | n.a. | Database[FooDB] |
| NPO15810 | Zea mays | Species | Poaceae | Eukaryota | Oil | n.a. | n.a. | Database[FooDB] |
| NPO15810 | Zea mays | Species | Poaceae | Eukaryota | Plant | n.a. | n.a. | Database[FooDB] |
| NPO15810 | Zea mays | Species | Poaceae | Eukaryota | Pollen Or Spore | n.a. | n.a. | Database[FooDB] |
| NPO15810 | Zea mays | Species | Poaceae | Eukaryota | Root | n.a. | n.a. | Database[FooDB] |
| NPO15810 | Zea mays | Species | Poaceae | Eukaryota | Seed | n.a. | n.a. | Database[FooDB] |
| NPO15810 | Zea mays | Species | Poaceae | Eukaryota | Seed Essent. Oil | n.a. | n.a. | Database[FooDB] |
| NPO15810 | Zea mays | Species | Poaceae | Eukaryota | Shoot | n.a. | n.a. | Database[FooDB] |
| NPO15810 | Zea mays | Species | Poaceae | Eukaryota | Silk Essent. Oil | n.a. | n.a. | Database[FooDB] |
| NPO15810 | Zea mays | Species | Poaceae | Eukaryota | Silk Stigma Style | n.a. | n.a. | Database[FooDB] |
| NPO15810 | Zea mays | Species | Poaceae | Eukaryota | Stem | n.a. | n.a. | Database[FooDB] |
| NPO27288 | Citrus maxima | Species | Rutaceae | Eukaryota | n.a. | n.a. | Database[FooDB] | |
| NPO15462 | Angelica sinensis | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO11100 | Artemisia capillaris | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO29141 | Panax ginseng | Species | Araliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO4391 | Hypericum perforatum | Species | Hypericaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO11438 | Angelica gigas | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO8666 | Acorus tatarinowii | Species | Acoraceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO26589 | Artemisia annua L. | Strain | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO1484 | Bupleurum scorzonerifolium | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO29401 | Bupleurum chinense | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO28295 | Foeniculum vulgare | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO8367 | Fructus schiandrae | n.a. | n.a. | n.a. | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO3107 | Bupleurum falcatum | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO21355 | Elsholtzia ciliata | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO10506 | Artemisia apiacea | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO8650.1 | Perilla frutescens var. arguta | Varieties | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO14602 | Vitex negundo | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO7929 | Curcuma zedoaria | Species | Zingiberaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO15810 | Zea mays | Species | Poaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO18046 | Mosla chinensis | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO2921 | Angelica acutiloba | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO22741 | Curcuma kwangsiensis | Species | Zingiberaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO29141 | Panax ginseng | Species | Araliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[MetaboLights] |
| NPO27288 | Citrus maxima | Species | Rutaceae | Eukaryota | n.a. | n.a. | Database[Phenol-Explorer] | |
| NPO29141 | Panax ginseng | Species | Araliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO26589 | Artemisia annua L. | Strain | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO11100 | Artemisia capillaris | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO3107 | Bupleurum falcatum | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO4682 | Lindera aggregata | Species | Lauraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO15462 | Angelica sinensis | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO25825 | Saussurea lappa | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO8666 | Acorus tatarinowii | Species | Acoraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO1484 | Bupleurum scorzonerifolium | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO29401 | Bupleurum chinense | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO7929 | Curcuma zedoaria | Species | Zingiberaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO2921 | Angelica acutiloba | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO11438 | Angelica gigas | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO4391 | Hypericum perforatum | Species | Hypericaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO8650.1 | Perilla frutescens var. arguta | Varieties | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO18046 | Mosla chinensis | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO28295 | Foeniculum vulgare | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO15810 | Zea mays | Species | Poaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO8367 | Fructus schiandrae | n.a. | n.a. | n.a. | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO27288 | Citrus maxima | Species | Rutaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO21355 | Elsholtzia ciliata | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO14602 | Vitex negundo | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO10506 | Artemisia apiacea | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO22741 | Curcuma kwangsiensis | Species | Zingiberaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO26589 | Artemisia annua L. | Strain | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO15462 | Angelica sinensis | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO29141 | Panax ginseng | Species | Araliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO29401 | Bupleurum chinense | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO7929 | Curcuma zedoaria | Species | Zingiberaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO18046 | Mosla chinensis | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO15810 | Zea mays | Species | Poaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO8666 | Acorus tatarinowii | Species | Acoraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO2618 | Curcuma wenyujin | Species | Zingiberaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO11438 | Angelica gigas | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO28295 | Foeniculum vulgare | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO14602 | Vitex negundo | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO22741 | Curcuma kwangsiensis | Species | Zingiberaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO26351 | Agastache rugosa | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO3107 | Bupleurum falcatum | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO1484 | Bupleurum scorzonerifolium | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO11100 | Artemisia capillaris | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO4391 | Hypericum perforatum | Species | Hypericaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO21355 | Elsholtzia ciliata | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO2921 | Angelica acutiloba | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO10506 | Artemisia apiacea | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO2618 | Curcuma wenyujin | Species | Zingiberaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO7929 | Curcuma zedoaria | Species | Zingiberaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO22741 | Curcuma kwangsiensis | Species | Zingiberaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO26589 | Artemisia annua L. | Strain | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO8666 | Acorus tatarinowii | Species | Acoraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO4391 | Hypericum perforatum | Species | Hypericaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO18046 | Mosla chinensis | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO2921 | Angelica acutiloba | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO18068 | Curcuma phaeocaulis | Species | Zingiberaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO11100 | Artemisia capillaris | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO15462 | Angelica sinensis | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO11438 | Angelica gigas | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO28295 | Foeniculum vulgare | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO14602 | Vitex negundo | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO25825 | Saussurea lappa | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO27288 | Citrus maxima | Species | Rutaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO29141 | Panax ginseng | Species | Araliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO4682 | Lindera aggregata | Species | Lauraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO29401 | Bupleurum chinense | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO10506 | Artemisia apiacea | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO3107 | Bupleurum falcatum | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO21355 | Elsholtzia ciliata | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO13346 | Lindera strichnifolia | Species | Tineidae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO26351 | Agastache rugosa | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO29016 | Valeriana jatamansi | Species | Caprifoliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO1484 | Bupleurum scorzonerifolium | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO15810 | Zea mays | Species | Poaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO1484 | Bupleurum scorzonerifolium | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO26351 | Agastache rugosa | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO11438 | Angelica gigas | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO14602 | Vitex negundo | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO29016 | Valeriana jatamansi | Species | Caprifoliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO4391 | Hypericum perforatum | Species | Hypericaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO28295 | Foeniculum vulgare | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO27288 | Citrus maxima | Species | Rutaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO2921 | Angelica acutiloba | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO4682 | Lindera aggregata | Species | Lauraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO15462 | Angelica sinensis | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO7929 | Curcuma zedoaria | Species | Zingiberaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO29141 | Panax ginseng | Species | Araliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO15810 | Zea mays | Species | Poaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO8650.1 | Perilla frutescens var. arguta | Varieties | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO2618 | Curcuma wenyujin | Species | Zingiberaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO25825 | Saussurea lappa | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO29401 | Bupleurum chinense | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO3107 | Bupleurum falcatum | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO11100 | Artemisia capillaris | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO22741 | Curcuma kwangsiensis | Species | Zingiberaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO18068 | Curcuma phaeocaulis | Species | Zingiberaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO10506 | Artemisia apiacea | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO26589 | Artemisia annua L. | Strain | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO18046 | Mosla chinensis | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO21355 | Elsholtzia ciliata | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO8666 | Acorus tatarinowii | Species | Acoraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
Note for Reference:
In addition to directly collecting NP source organism data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated them from below databases:
☉ UNPD: Universal Natural Products Database [PMID: 23638153].
☉ StreptomeDB: a database of streptomycetes natural products [PMID: 33051671].
☉ TM-MC: a database of medicinal materials and chemical compounds in Northeast Asian traditional medicine [PMID: 26156871].
☉ TCM@Taiwan: a Traditional Chinese Medicine database [PMID: 21253603].
☉ TCMID: a Traditional Chinese Medicine database [PMID: 29106634].
☉ TCMSP: The traditional Chinese medicine systems pharmacology database and analysis platform [PMID: 24735618].
☉ HerDing: a herb recommendation system to treat diseases using genes and chemicals [PMID: 26980517].
☉ MetaboLights: a metabolomics database [PMID: 27010336].
☉ FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].
  NP Quantity Composition/Concentration| Organism ID | Organism Name | Organism Material Preparation | Organism Part | NP Quantity (Standard) | NP Quantity (Minimum) | NP Quantity (Maximum) | Quantity Unit | Reference |
|---|
Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP quantitative records for specific NP domains (e.g., NPS from foods or herbs) from domain-specific databases. These databases include:
☉ DUKE: Dr. Duke's Phytochemical and Ethnobotanical Databases.
☉ PHENOL EXPLORER: is the first comprehensive database on polyphenol content in foods [PMID: 24103452], its homepage can be accessed at here.
☉ FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].
Biological Activity
| Target ID | Target Type | Target Name | Target Organism | Activity Type | Activity Relation | Value | Unit | Reference |
|---|
| Target ID | Target Type | Target Name | Target Organism | Activity Type | Activity Relation | Value | Unit | Reference |
|---|
| Target ID | Target Type | Target Name | Target Organism | Activity Type | Activity Relation | Value | Unit | Reference |
|---|
Experimental ADME
| Experiment Model | Experiment Tissue | ADME Type | ADME Relation | ADME Value | ADME Unit | Reference |
|---|
Experimental Toxicity
| Experiment Model | Experiment Organism | Toxicity Type | Toxicity Relation | Toxicity Value | Toxicity Unit | Reference |
|---|
Common Abbreviations:
LC: Lethal Concentration; LD: Lethal Dose; LT:Lethal Time; NOAEL: No-observed-adverse-effect Level; BMDL: Benchmark Dose Lower Confidence Limit; BMD: Benchmark Dose; BMC:Benchmark Concentration; LOAEL: Lowest Observed Adverse Effect Level; RfD:Reference Dose; RfC:Reference Concentration; MRL: Minimal Risk Level; MEG: Maximum Exposure Guideline; PAC: Protective Action Criteria
| Hepatotoxicity | Carcinogenicity | Mutagenicity | Cardiotoxicity | Respiratory Toxicity | Eye Irritation | Endocrine Disruption |
|---|---|---|---|---|---|---|
|
|
|
|
|
|
|
Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP toxicity records from domain-specific databases. These databases include:
☉ ToxValDB: a curated database that compiles quantitative toxicity values for chemicals from diverse public sources to support toxicological research and risk assessment.
☉ TOXRIC: a comprehensive, free-to-access, online database providing toxicological/feature data. The toxicity labels are retrieved from this database. [PMID: 36400569]
  Chemically structural similarityTop-200 similar NPs were calculated against the active-NP-set (includes approximately 50,000 NPs with experimentally-derived bioactivity available in NPASS)
Similarity is measured using the Tanimoto coefficient (Tc) , which compares the binary fingerprints of two molecules. Tc is calculated as the intersection divided by the union of '1' bits in the fingerprints, ranging from 0 to 1, with 1 indicating highest similarity.
●  The left chart: Distribution of similarity level between NPC123229 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.5 or Top200).
Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.
●  The left chart: Distribution of similarity level between NPC123229 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.5 or Top200).
| Similarity Score | Similarity Level | Drug ID | Developmental Stage |
|---|---|---|---|
| NPD |
  Bioactivity similaritySimilarity level is defined by Bioactivity similarity was calculated based on bioactivity descriptors of compounds. The bioactivity descriptors were calculated by a recently developed AI algorithm Chemical Checker (CC) [Nature Biotechnology, 38:1087–1096, 2020; Nature Communications, 12:3932, 2021], which evaluated bioactivity similarities at five levels:
☉ A: chemistry similarity;
☉ B: biological targets similarity;
☉ C: networks similarity;
☉ D: cell-based bioactivity similarity;
☉ E: similarity based on clinical data.
Those 5 categories of CC bioactivity descriptors were calculated and then subjected to manifold projection using UMAP algorithm, to project all NPs on a 2-Dimensional space. The current NP was highlighted with a small circle in the 2-D map. Below figures: left-to-right, A-to-E.
