Natural Product: NPC478005

Natural Product ID:  NPC478005
Common Name:   n.a.
IUPAC Name:  
Synonyms:  
Molecular Formula:   C38H48N8O12S
Standard InCHIKey:  IBKGYXSLNPEYQW-IHDBKHCHSA-N
Standard InCHI:  InChI=1S/C38H48N8O12S/c1-20(45(2)34(53)26(39)16-22-5-4-6-24(48)15-22)31(33(52)40-19-25-18-29(49)35(58-25)46-13-11-30(50)43-38(46)57)44-32(51)27(12-14-59-3)41-37(56)42-28(36(54)55)17-21-7-9-23(47)10-8-21/h4-11,13,15,19-20,26-29,31,35,47-49H,12,14,16-18,39H2,1-3H3,(H,40,52)(H,44,51)(H,54,55)(H2,41,42,56)(H,43,50,57)/b25-19-/t20-,26-,27-,28-,29+,31-,35+/m0/s1
Canonical SMILES:  CSCC[C@@H](C(=N[C@@H]([C@@H](N(C(=O)[C@H](Cc1cccc(c1)O)N)C)C)C(=N/C=C/1O[C@H]([C@@H](C1)O)n1ccc(nc1=O)O)O)O)N=C(N[C@H](C(=O)O)Cc1ccc(cc1)O)O
First Find Year:  
Max Developmental Stage:  
Synthetic Gene Cluster:   ;

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO30376 Streptomyces sp. Species Streptomycetaceae Bacteria PMID[24964393]

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT18 Organism Pseudomonas aeruginosa Pseudomonas aeruginosa MIC = 8 ug/ml 24964393
NPT790 Organism Mycobacterium tuberculosis H37Rv Mycobacterium tuberculosis H37Rv MIC = 8 ug/ml 24964393

  Similar Natural Products in NPASS

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC478005 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
0.9436 High Similarity NPC478007
0.934 High Similarity NPC478008
0.8396 Intermediate Similarity NPC153554
0.8229 Intermediate Similarity NPC94862
0.8112 Intermediate Similarity NPC302715
0.8051 Intermediate Similarity NPC61332
0.8051 Intermediate Similarity NPC240130
0.8032 Intermediate Similarity NPC248670
0.798 Intermediate Similarity NPC477638
0.798 Intermediate Similarity NPC477632
0.7947 Intermediate Similarity NPC196243
0.7926 Intermediate Similarity NPC198254
0.7926 Intermediate Similarity NPC274198
0.7926 Intermediate Similarity NPC276506
0.7865 Intermediate Similarity NPC97526
0.7865 Intermediate Similarity NPC119652
0.7861 Intermediate Similarity NPC471771
0.7861 Intermediate Similarity NPC304074
0.7861 Intermediate Similarity NPC290755
0.7838 Intermediate Similarity NPC469243
0.7838 Intermediate Similarity NPC475544
0.7817 Intermediate Similarity NPC102959
0.7811 Intermediate Similarity NPC314056
0.7807 Intermediate Similarity NPC223207
0.7801 Intermediate Similarity NPC26108
0.7784 Intermediate Similarity NPC473404
0.7778 Intermediate Similarity NPC280022
0.7778 Intermediate Similarity NPC60516
0.7772 Intermediate Similarity NPC269750
0.7772 Intermediate Similarity NPC194671
0.7761 Intermediate Similarity NPC477639
0.7731 Intermediate Similarity NPC478011
0.7713 Intermediate Similarity NPC63931
0.7712 Intermediate Similarity NPC478013
0.7708 Intermediate Similarity NPC471165
0.7708 Intermediate Similarity NPC279871
0.7704 Intermediate Similarity NPC294951
0.77 Intermediate Similarity NPC477631
0.7699 Intermediate Similarity NPC314176
0.7696 Intermediate Similarity NPC89831
0.7688 Intermediate Similarity NPC477636
0.7685 Intermediate Similarity NPC477550
0.7685 Intermediate Similarity NPC477552
0.7673 Intermediate Similarity NPC329295
0.7668 Intermediate Similarity NPC50016
0.7656 Intermediate Similarity NPC306804
0.7656 Intermediate Similarity NPC137627
0.7622 Intermediate Similarity NPC473580
0.7617 Intermediate Similarity NPC17698
0.7614 Intermediate Similarity NPC471049
0.7614 Intermediate Similarity NPC471050
0.7614 Intermediate Similarity NPC471048
0.761 Intermediate Similarity NPC477551
0.76 Intermediate Similarity NPC473305
0.76 Intermediate Similarity NPC163961
0.7583 Intermediate Similarity NPC478012
0.7565 Intermediate Similarity NPC475532
0.7565 Intermediate Similarity NPC273755
0.7552 Intermediate Similarity NPC475204
0.7552 Intermediate Similarity NPC475123
0.7526 Intermediate Similarity NPC473354
0.7526 Intermediate Similarity NPC165285
0.7526 Intermediate Similarity NPC476227
0.7513 Intermediate Similarity NPC477637
0.75 Intermediate Similarity NPC45037
0.7461 Intermediate Similarity NPC46009
0.7436 Intermediate Similarity NPC158277
0.7424 Intermediate Similarity NPC476321
0.7409 Intermediate Similarity NPC129486
0.7387 Intermediate Similarity NPC471526
0.7374 Intermediate Similarity NPC170302
0.7374 Intermediate Similarity NPC475564
0.7374 Intermediate Similarity NPC475409
0.7373 Intermediate Similarity NPC478006
0.7371 Intermediate Similarity NPC40234
0.7358 Intermediate Similarity NPC469444
0.7358 Intermediate Similarity NPC107938
0.7358 Intermediate Similarity NPC294516
0.7356 Intermediate Similarity NPC469443
0.735 Intermediate Similarity NPC314882
0.7347 Intermediate Similarity NPC155506
0.7347 Intermediate Similarity NPC159767
0.7333 Intermediate Similarity NPC230611
0.7333 Intermediate Similarity NPC315467
0.7313 Intermediate Similarity NPC138083
0.7303 Intermediate Similarity NPC478009
0.7277 Intermediate Similarity NPC276120
0.7273 Intermediate Similarity NPC473546
0.7268 Intermediate Similarity NPC328649
0.7263 Intermediate Similarity NPC323336
0.7263 Intermediate Similarity NPC326349
0.726 Intermediate Similarity NPC323662
0.7259 Intermediate Similarity NPC473402
0.7256 Intermediate Similarity NPC469445
0.7255 Intermediate Similarity NPC64140
0.7255 Intermediate Similarity NPC174122
0.7241 Intermediate Similarity NPC4910
0.7233 Intermediate Similarity NPC328763
0.723 Intermediate Similarity NPC220060
0.7228 Intermediate Similarity NPC299806
0.722 Intermediate Similarity NPC477526
0.722 Intermediate Similarity NPC473407
0.722 Intermediate Similarity NPC473378
0.7216 Intermediate Similarity NPC61004
0.7206 Intermediate Similarity NPC234069
0.72 Intermediate Similarity NPC32064
0.7198 Intermediate Similarity NPC59827
0.7198 Intermediate Similarity NPC184933
0.7179 Intermediate Similarity NPC209463
0.716 Intermediate Similarity NPC478010
0.7158 Intermediate Similarity NPC476268
0.7157 Intermediate Similarity NPC329731
0.7157 Intermediate Similarity NPC96275
0.715 Intermediate Similarity NPC314083
0.7143 Intermediate Similarity NPC315388
0.7143 Intermediate Similarity NPC315542
0.7135 Intermediate Similarity NPC244336
0.7109 Intermediate Similarity NPC242728
0.7103 Intermediate Similarity NPC246303
0.7095 Intermediate Similarity NPC50548
0.7095 Intermediate Similarity NPC477527
0.709 Intermediate Similarity NPC233702
0.7087 Intermediate Similarity NPC51047
0.7085 Intermediate Similarity NPC477462
0.7085 Intermediate Similarity NPC164608
0.7071 Intermediate Similarity NPC328494
0.707 Intermediate Similarity NPC194699
0.707 Intermediate Similarity NPC219350
0.7062 Intermediate Similarity NPC241794
0.7059 Intermediate Similarity NPC16188
0.7053 Intermediate Similarity NPC202198
0.7048 Intermediate Similarity NPC144314
0.7047 Intermediate Similarity NPC62104
0.7047 Intermediate Similarity NPC1390
0.7041 Intermediate Similarity NPC254700
0.7037 Intermediate Similarity NPC473491
0.7028 Intermediate Similarity NPC473450
0.702 Intermediate Similarity NPC471568
0.702 Intermediate Similarity NPC473693
0.702 Intermediate Similarity NPC196091
0.7018 Intermediate Similarity NPC326333
0.7018 Intermediate Similarity NPC277306
0.7018 Intermediate Similarity NPC469442
0.7005 Intermediate Similarity NPC29531
0.7005 Intermediate Similarity NPC302597
0.7 Intermediate Similarity NPC136797
0.7 Intermediate Similarity NPC149962
0.699 Remote Similarity NPC210377
0.699 Remote Similarity NPC217804
0.699 Remote Similarity NPC5719
0.699 Remote Similarity NPC22883
0.6986 Remote Similarity NPC65714
0.6981 Remote Similarity NPC123859
0.698 Remote Similarity NPC475421
0.6979 Remote Similarity NPC244509
0.697 Remote Similarity NPC186617
0.6963 Remote Similarity NPC262166
0.6963 Remote Similarity NPC56685
0.6957 Remote Similarity NPC246591
0.6955 Remote Similarity NPC25539
0.6955 Remote Similarity NPC326027
0.6952 Remote Similarity NPC80514
0.6947 Remote Similarity NPC7817
0.6947 Remote Similarity NPC475168
0.6939 Remote Similarity NPC471052
0.6939 Remote Similarity NPC471051
0.6939 Remote Similarity NPC471053
0.6923 Remote Similarity NPC471527
0.6919 Remote Similarity NPC473371
0.6919 Remote Similarity NPC63040
0.6909 Remote Similarity NPC251036
0.6904 Remote Similarity NPC472923
0.689 Remote Similarity NPC470728
0.6887 Remote Similarity NPC471592
0.6878 Remote Similarity NPC470112
0.6878 Remote Similarity NPC167763
0.6878 Remote Similarity NPC470903
0.6875 Remote Similarity NPC122590
0.6872 Remote Similarity NPC471563
0.6869 Remote Similarity NPC15068
0.6865 Remote Similarity NPC132636
0.6852 Remote Similarity NPC473460
0.6849 Remote Similarity NPC14877
0.6849 Remote Similarity NPC145178
0.6849 Remote Similarity NPC475350
0.6845 Remote Similarity NPC168861
0.6842 Remote Similarity NPC105717
0.6839 Remote Similarity NPC470902
0.6837 Remote Similarity NPC114806
0.6837 Remote Similarity NPC476662
0.6834 Remote Similarity NPC141957
0.6832 Remote Similarity NPC317362
0.6832 Remote Similarity NPC318930
0.6828 Remote Similarity NPC214988
0.6825 Remote Similarity NPC81026
0.681 Remote Similarity NPC248822
0.6791 Remote Similarity NPC476661
0.6791 Remote Similarity NPC476989
0.6789 Remote Similarity NPC311658
0.6786 Remote Similarity NPC24617

  Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC478005 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.7487 Intermediate Similarity NPD8303 Discontinued
0.7407 Intermediate Similarity NPD7495 Discontinued
0.7407 Intermediate Similarity NPD8019 Approved
0.7352 Intermediate Similarity NPD6796 Discontinued
0.7282 Intermediate Similarity NPD4652 Approved
0.7209 Intermediate Similarity NPD3803 Clinical (unspecified phase)
0.7189 Intermediate Similarity NPD6188 Approved
0.7189 Intermediate Similarity NPD6189 Approved
0.7181 Intermediate Similarity NPD7303 Discontinued
0.7173 Intermediate Similarity NPD7118 Clinical (unspecified phase)
0.7165 Intermediate Similarity NPD2098 Approved
0.7143 Intermediate Similarity NPD2889 Approved
0.7143 Intermediate Similarity NPD6187 Approved
0.7143 Intermediate Similarity NPD2888 Approved
0.7143 Intermediate Similarity NPD2890 Approved
0.7143 Intermediate Similarity NPD3879 Approved
0.7143 Intermediate Similarity NPD2017 Approved
0.7097 Intermediate Similarity NPD3878 Approved
0.7075 Intermediate Similarity NPD6254 Approved
0.7075 Intermediate Similarity NPD6255 Approved
0.7075 Intermediate Similarity NPD6256 Approved
0.7071 Intermediate Similarity NPD5137 Approved
0.7062 Intermediate Similarity NPD2097 Approved
0.7059 Intermediate Similarity NPD6237 Clinical (unspecified phase)
0.7059 Intermediate Similarity NPD5946 Clinical (unspecified phase)
0.7053 Intermediate Similarity NPD7523 Phase 3
0.7028 Intermediate Similarity NPD6253 Approved
0.7011 Intermediate Similarity NPD6866 Clinical (unspecified phase)
0.7011 Intermediate Similarity NPD6867 Clinical (unspecified phase)
0.7005 Intermediate Similarity NPD7617 Discontinued
0.699 Remote Similarity NPD5218 Approved
0.699 Remote Similarity NPD5219 Approved
0.698 Remote Similarity NPD7695 Clinical (unspecified phase)
0.6976 Remote Similarity NPD6853 Approved
0.6976 Remote Similarity NPD6851 Approved
0.6935 Remote Similarity NPD7608 Discontinued
0.6915 Remote Similarity NPD5200 Clinical (unspecified phase)
0.6907 Remote Similarity NPD7749 Clinical (unspecified phase)
0.6884 Remote Similarity NPD6863 Phase 2
0.6863 Remote Similarity NPD6297 Approved
0.6818 Remote Similarity NPD4521 Clinical (unspecified phase)
0.6794 Remote Similarity NPD4435 Approved
0.6794 Remote Similarity NPD4157 Discontinued
0.6779 Remote Similarity NPD6967 Phase 2
0.6755 Remote Similarity NPD7978 Discontinued
0.6746 Remote Similarity NPD4434 Approved
0.6746 Remote Similarity NPD6089 Clinical (unspecified phase)
0.673 Remote Similarity NPD6505 Approved
0.673 Remote Similarity NPD6504 Approved
0.6728 Remote Similarity NPD8162 Phase 2
0.6728 Remote Similarity NPD8163 Clinical (unspecified phase)
0.6719 Remote Similarity NPD6682 Clinical (unspecified phase)
0.6716 Remote Similarity NPD7485 Phase 3
0.6716 Remote Similarity NPD7484 Phase 3
0.6701 Remote Similarity NPD7131 Phase 3
0.6697 Remote Similarity NPD5152 Clinical (unspecified phase)
0.6667 Remote Similarity NPD7565 Approved
0.665 Remote Similarity NPD5484 Approved
0.665 Remote Similarity NPD5485 Approved
0.665 Remote Similarity NPD2541 Clinical (unspecified phase)
0.6614 Remote Similarity NPD7450 Phase 2
0.6598 Remote Similarity NPD5348 Clinical (unspecified phase)
0.6587 Remote Similarity NPD2852 Approved
0.6571 Remote Similarity NPD6557 Phase 2
0.6564 Remote Similarity NPD6390 Discontinued
0.6564 Remote Similarity NPD6078 Clinical (unspecified phase)
0.6555 Remote Similarity NPD7132 Clinical (unspecified phase)
0.6541 Remote Similarity NPD3136 Phase 2
0.6533 Remote Similarity NPD7827 Phase 1
0.6528 Remote Similarity NPD3659 Discontinued
0.6524 Remote Similarity NPD5323 Approved
0.6518 Remote Similarity NPD2853 Approved
0.6515 Remote Similarity NPD2891 Approved
0.6514 Remote Similarity NPD7811 Phase 3
0.6514 Remote Similarity NPD7810 Phase 3
0.6512 Remote Similarity NPD6751 Clinical (unspecified phase)
0.6508 Remote Similarity NPD6852 Discontinued
0.65 Remote Similarity NPD4557 Approved
0.6497 Remote Similarity NPD6670 Clinical (unspecified phase)
0.6492 Remote Similarity NPD8076 Discontinued
0.6485 Remote Similarity NPD8031 Discontinued
0.6481 Remote Similarity NPD3473 Clinical (unspecified phase)
0.6479 Remote Similarity NPD3335 Approved
0.6471 Remote Similarity NPD3802 Phase 3
0.6468 Remote Similarity NPD5967 Approved
0.6465 Remote Similarity NPD3455 Phase 2
0.645 Remote Similarity NPD5356 Approved
0.645 Remote Similarity NPD2515 Approved
0.645 Remote Similarity NPD5355 Approved
0.645 Remote Similarity NPD3007 Approved
0.6445 Remote Similarity NPD7281 Phase 3
0.6445 Remote Similarity NPD7280 Phase 3
0.6435 Remote Similarity NPD8318 Clinical (unspecified phase)
0.6425 Remote Similarity NPD5265 Approved
0.6425 Remote Similarity NPD5264 Approved
0.6422 Remote Similarity NPD7133 Discontinued
0.6421 Remote Similarity NPD6901 Phase 3
0.6419 Remote Similarity NPD5076 Approved
0.6419 Remote Similarity NPD5077 Approved
0.6417 Remote Similarity NPD5299 Approved
0.6413 Remote Similarity NPD7607 Clinical (unspecified phase)
0.6404 Remote Similarity NPD8070 Approved
0.6402 Remote Similarity NPD2856 Approved
0.6402 Remote Similarity NPD2854 Approved
0.6402 Remote Similarity NPD555 Phase 2
0.6402 Remote Similarity NPD2855 Approved
0.64 Remote Similarity NPD2513 Approved
0.64 Remote Similarity NPD3591 Approved
0.64 Remote Similarity NPD3592 Approved
0.6396 Remote Similarity NPD7613 Discontinued
0.6392 Remote Similarity NPD7066 Clinical (unspecified phase)
0.6386 Remote Similarity NPD7494 Clinical (unspecified phase)
0.6386 Remote Similarity NPD8255 Phase 2
0.6385 Remote Similarity NPD3334 Approved
0.6383 Remote Similarity NPD8292 Phase 2
0.6383 Remote Similarity NPD4086 Phase 1
0.6378 Remote Similarity NPD5613 Approved
0.6378 Remote Similarity NPD7892 Clinical (unspecified phase)
0.6378 Remote Similarity NPD2014 Approved
0.6378 Remote Similarity NPD2016 Approved
0.6378 Remote Similarity NPD5614 Approved
0.6378 Remote Similarity NPD2013 Approved
0.6373 Remote Similarity NPD6119 Clinical (unspecified phase)
0.6368 Remote Similarity NPD4782 Clinical (unspecified phase)
0.6359 Remote Similarity NPD2517 Approved
0.6357 Remote Similarity NPD7655 Discontinued
0.6355 Remote Similarity NPD3919 Approved
0.6355 Remote Similarity NPD4951 Discontinued
0.6354 Remote Similarity NPD3175 Clinical (unspecified phase)
0.6354 Remote Similarity NPD2239 Approved
0.6354 Remote Similarity NPD2240 Approved
0.635 Remote Similarity NPD22 Approved
0.635 Remote Similarity NPD2053 Approved
0.6347 Remote Similarity NPD7282 Approved
0.6345 Remote Similarity NPD3536 Discontinued
0.6345 Remote Similarity NPD6419 Discontinued
0.6343 Remote Similarity NPD5525 Clinical (unspecified phase)
0.634 Remote Similarity NPD2976 Clinical (unspecified phase)
0.634 Remote Similarity NPD6860 Clinical (unspecified phase)
0.6338 Remote Similarity NPD6556 Clinical (unspecified phase)
0.6337 Remote Similarity NPD5563 Clinical (unspecified phase)
0.6337 Remote Similarity NPD5773 Approved
0.6337 Remote Similarity NPD5772 Approved
0.6337 Remote Similarity NPD7089 Clinical (unspecified phase)
0.6335 Remote Similarity NPD6612 Phase 2
0.6332 Remote Similarity NPD7836 Clinical (unspecified phase)
0.6332 Remote Similarity NPD5267 Discontinued
0.633 Remote Similarity NPD7669 Phase 3
0.6327 Remote Similarity NPD8290 Clinical (unspecified phase)
0.6318 Remote Similarity NPD6677 Suspended
0.6316 Remote Similarity NPD8022 Clinical (unspecified phase)
0.6316 Remote Similarity NPD8153 Approved
0.6316 Remote Similarity NPD8152 Approved
0.6313 Remote Similarity NPD3479 Discontinued
0.6311 Remote Similarity NPD2516 Approved
0.6308 Remote Similarity NPD5298 Clinical (unspecified phase)
0.6305 Remote Similarity NPD7738 Approved
0.6305 Remote Similarity NPD7737 Approved
0.63 Remote Similarity NPD2052 Approved
0.6296 Remote Similarity NPD259 Phase 1
0.6296 Remote Similarity NPD6377 Clinical (unspecified phase)
0.6294 Remote Similarity NPD3988 Approved
0.6294 Remote Similarity NPD3987 Approved
0.6293 Remote Similarity NPD6315 Phase 2
0.6292 Remote Similarity NPD7807 Clinical (unspecified phase)
0.6289 Remote Similarity NPD5341 Clinical (unspecified phase)
0.6283 Remote Similarity NPD6073 Approved
0.6276 Remote Similarity NPD8323 Discontinued
0.6269 Remote Similarity NPD9570 Approved
0.6267 Remote Similarity NPD5042 Phase 1
0.6263 Remote Similarity NPD4153 Approved
0.6263 Remote Similarity NPD4791 Clinical (unspecified phase)
0.6263 Remote Similarity NPD4739 Approved
0.626 Remote Similarity NPD7486 Phase 1
0.6256 Remote Similarity NPD2977 Approved
0.6256 Remote Similarity NPD4566 Approved
0.6256 Remote Similarity NPD4413 Clinical (unspecified phase)
0.6256 Remote Similarity NPD2978 Approved
0.6256 Remote Similarity NPD4567 Approved
0.625 Remote Similarity NPD5852 Approved
0.625 Remote Similarity NPD4648 Approved
0.625 Remote Similarity NPD5851 Approved
0.625 Remote Similarity NPD4126 Approved
0.625 Remote Similarity NPD4646 Approved
0.625 Remote Similarity NPD4647 Approved
0.6238 Remote Similarity NPD6620 Discovery
0.6237 Remote Similarity NPD2087 Approved
0.6237 Remote Similarity NPD2088 Approved
0.6237 Remote Similarity NPD6809 Clinical (unspecified phase)
0.6234 Remote Similarity NPD5561 Approved
0.6234 Remote Similarity NPD5562 Approved
0.6234 Remote Similarity NPD8149 Discontinued
0.6231 Remote Similarity NPD5638 Approved
0.6226 Remote Similarity NPD5445 Approved
0.6223 Remote Similarity NPD4125 Approved
0.6218 Remote Similarity NPD6865 Phase 2
0.6218 Remote Similarity NPD6864 Phase 2
0.6213 Remote Similarity NPD8356 Approved
0.6212 Remote Similarity NPD6088 Approved
0.6211 Remote Similarity NPD5729 Clinical (unspecified phase)

Structure

External Identifiers

PubChem CID  
ChEMBL   CHEMBL3314798
ZINC  

Physicochemical Properties

Molecular Weight:  840.31
ALogP:  -5.1029
MLogP:  3.33
XLogP:  -0.935
# Rotatable Bonds:  32
Polar Surface Area:  341.55
# H-Bond Aceptor:  18
# H-Bond Donor:  10
# Rings:  4
# Heavy Atoms:  59

Download Data

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General Info & Identifiers & Properties  
Structure MOL file  
Source Organisms  
Biological Activities  
Similar NPs/Drugs