Natural Product: NPC475619

Natural Product ID:  NPC475619
Common Name:   n.a.
IUPAC Name:  
Synonyms:   (10S)-Hydroxypheophytin A
Molecular Formula:   C55H74N4O6
Standard InCHIKey:  FXEQZWHMONOEMA-NHQODRBHSA-N
Standard InCHI:  InChI=1S/C55H74N4O6/c1-13-39-35(8)42-28-44-37(10)41(24-25-48(60)65-27-26-34(7)23-17-22-33(6)21-16-20-32(5)19-15-18-31(3)4)51(58-44)50-52-49(53(61)55(50,63)54(62)64-12)38(11)45(59-52)30-47-40(14-2)36(9)43(57-47)29-46(39)56-42/h13,26,28-33,37,41,56,59,63H,1,14-25,27H2,2-12H3/b34-26+,42-28-,43-29-,44-28-,45-30-,46-29-,47-30-,51-50+/t32?,33?,37-,41-,55-/m0/s1
Canonical SMILES:  CCC1=C(C)C2=N/C/1=Cc1[nH]c3c(c1C)C(=O)[C@](/C/3=C1/N=C(/C=c/3[nH]/c(=C2)/c(C=C)c3C)[C@H]([C@@H]1CCC(=O)OC/C=C(/CCCC(CCCC(CCCC(C)C)C)C)C)C)(O)C(=O)OC
First Find Year:  
Max Developmental Stage:  
Synthetic Gene Cluster:   ;

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO8063 Clerodendrum calamitosum Species Lamiaceae Eukaryota PMID[11473423]
NPO14864 Clerodendrum cyrtophyllum Species Lamiaceae Eukaryota PMID[11473423]

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT2 Others Unspecified ED50 = 19 ug/ml 23999046
NPT91 Cell Line KB Homo sapiens ED50 = 12 ug/ml 23999046
NPT180 Cell Line HCT-8 Homo sapiens ED50 = 14 ug/ml 23999046
NPT916 Cell Line SK-MEL Homo sapiens ED50 = 14 ug/ml 23999046
NPT81 Cell Line A549 Homo sapiens ED50 = 15 ug/ml 23999046
NPT83 Cell Line MCF7 Homo sapiens ED50 = 8.8 ug/ml 23999046
NPT309 Cell Line 1A9 Homo sapiens ED50 = 22 ug/ml 10395514

  Similar Natural Products in NPASS

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC475619 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
0.9807 High Similarity NPC268676
0.9807 High Similarity NPC27324
0.8986 High Similarity NPC187255
0.8863 High Similarity NPC85702
0.8841 High Similarity NPC257175
0.872 High Similarity NPC473493
0.8454 Intermediate Similarity NPC195457
0.7373 Intermediate Similarity NPC67551
0.7348 Intermediate Similarity NPC249428
0.7273 Intermediate Similarity NPC287795
0.7198 Intermediate Similarity NPC312645
0.7174 Intermediate Similarity NPC12344
0.7069 Intermediate Similarity NPC89508
0.7043 Intermediate Similarity NPC469743
0.6987 Remote Similarity NPC233727
0.6972 Remote Similarity NPC165964
0.6957 Remote Similarity NPC244741
0.6936 Remote Similarity NPC36405
0.6935 Remote Similarity NPC470843
0.6935 Remote Similarity NPC94541
0.693 Remote Similarity NPC123019
0.6917 Remote Similarity NPC476818
0.691 Remote Similarity NPC82370
0.69 Remote Similarity NPC134848
0.6894 Remote Similarity NPC474412
0.689 Remote Similarity NPC131273
0.689 Remote Similarity NPC473441
0.6883 Remote Similarity NPC314297
0.6883 Remote Similarity NPC315545
0.688 Remote Similarity NPC235900
0.6877 Remote Similarity NPC14812
0.687 Remote Similarity NPC132539
0.687 Remote Similarity NPC314648
0.6867 Remote Similarity NPC314834
0.6862 Remote Similarity NPC2395
0.6846 Remote Similarity NPC235885
0.6842 Remote Similarity NPC214428
0.6842 Remote Similarity NPC15801
0.684 Remote Similarity NPC313796
0.684 Remote Similarity NPC313345
0.684 Remote Similarity NPC315638
0.684 Remote Similarity NPC314855
0.6835 Remote Similarity NPC96131
0.6833 Remote Similarity NPC160381
0.6831 Remote Similarity NPC33949
0.6828 Remote Similarity NPC67288
0.6826 Remote Similarity NPC165599
0.6825 Remote Similarity NPC26491
0.6824 Remote Similarity NPC284102
0.6822 Remote Similarity NPC471284
0.6803 Remote Similarity NPC471634
0.6803 Remote Similarity NPC473806
0.6802 Remote Similarity NPC57453
0.6798 Remote Similarity NPC241024
0.6793 Remote Similarity NPC207531
0.6789 Remote Similarity NPC70155
0.6787 Remote Similarity NPC471583
0.6787 Remote Similarity NPC471782
0.6786 Remote Similarity NPC178858
0.6776 Remote Similarity NPC46359
0.6771 Remote Similarity NPC221873
0.6767 Remote Similarity NPC18661
0.6767 Remote Similarity NPC277350
0.6765 Remote Similarity NPC472285
0.6756 Remote Similarity NPC55493
0.675 Remote Similarity NPC276657
0.6747 Remote Similarity NPC278540
0.6746 Remote Similarity NPC311451
0.6736 Remote Similarity NPC187494
0.6736 Remote Similarity NPC319556
0.6736 Remote Similarity NPC229893
0.6734 Remote Similarity NPC473187
0.6729 Remote Similarity NPC326479
0.6723 Remote Similarity NPC193361
0.6723 Remote Similarity NPC62844
0.6721 Remote Similarity NPC238278
0.672 Remote Similarity NPC253482
0.6711 Remote Similarity NPC141454
0.6709 Remote Similarity NPC39679
0.6708 Remote Similarity NPC141428
0.6706 Remote Similarity NPC475648
0.6695 Remote Similarity NPC470189
0.6695 Remote Similarity NPC40919
0.6694 Remote Similarity NPC35208
0.6682 Remote Similarity NPC191310
0.6681 Remote Similarity NPC131887
0.668 Remote Similarity NPC475424
0.668 Remote Similarity NPC79107
0.668 Remote Similarity NPC61813
0.6679 Remote Similarity NPC237901
0.6679 Remote Similarity NPC195788
0.6667 Remote Similarity NPC476467
0.6653 Remote Similarity NPC3207
0.6653 Remote Similarity NPC57690
0.6653 Remote Similarity NPC74969
0.6652 Remote Similarity NPC267343
0.664 Remote Similarity NPC282033
0.6639 Remote Similarity NPC74360
0.6639 Remote Similarity NPC31700
0.6638 Remote Similarity NPC127677
0.6638 Remote Similarity NPC258062
0.6638 Remote Similarity NPC470190
0.6638 Remote Similarity NPC137589
0.6637 Remote Similarity NPC138370
0.6628 Remote Similarity NPC329982
0.6627 Remote Similarity NPC107836
0.6624 Remote Similarity NPC87413
0.6614 Remote Similarity NPC473565
0.6612 Remote Similarity NPC174760
0.6611 Remote Similarity NPC477979
0.6611 Remote Similarity NPC473650
0.6611 Remote Similarity NPC160527
0.661 Remote Similarity NPC472752
0.6609 Remote Similarity NPC317572
0.6609 Remote Similarity NPC102008
0.6598 Remote Similarity NPC147446
0.6597 Remote Similarity NPC219087
0.6597 Remote Similarity NPC151976
0.6597 Remote Similarity NPC87856
0.6596 Remote Similarity NPC46225
0.6596 Remote Similarity NPC225821
0.6593 Remote Similarity NPC154339
0.6585 Remote Similarity NPC146824
0.6583 Remote Similarity NPC132211
0.6583 Remote Similarity NPC203614
0.6583 Remote Similarity NPC204491
0.6582 Remote Similarity NPC303951
0.6581 Remote Similarity NPC260909
0.6579 Remote Similarity NPC269886
0.6579 Remote Similarity NPC472295
0.6579 Remote Similarity NPC81802
0.6579 Remote Similarity NPC472210
0.6579 Remote Similarity NPC247735
0.6578 Remote Similarity NPC278434
0.6573 Remote Similarity NPC292416
0.6573 Remote Similarity NPC473689
0.6573 Remote Similarity NPC267853
0.6573 Remote Similarity NPC290529
0.657 Remote Similarity NPC242446
0.657 Remote Similarity NPC475476
0.6569 Remote Similarity NPC317752
0.6569 Remote Similarity NPC229348
0.6569 Remote Similarity NPC472291
0.6567 Remote Similarity NPC314254
0.6567 Remote Similarity NPC313966
0.6565 Remote Similarity NPC227582
0.6561 Remote Similarity NPC475844
0.656 Remote Similarity NPC94428
0.656 Remote Similarity NPC475406
0.656 Remote Similarity NPC475426
0.656 Remote Similarity NPC263937
0.6559 Remote Similarity NPC475362
0.6555 Remote Similarity NPC23294
0.6555 Remote Similarity NPC250129
0.6552 Remote Similarity NPC252338
0.6552 Remote Similarity NPC258048
0.655 Remote Similarity NPC473800
0.655 Remote Similarity NPC474121
0.655 Remote Similarity NPC181081
0.655 Remote Similarity NPC202812
0.6546 Remote Similarity NPC319880
0.6546 Remote Similarity NPC244839
0.6546 Remote Similarity NPC320324
0.6546 Remote Similarity NPC244897
0.6546 Remote Similarity NPC213143
0.6545 Remote Similarity NPC84347
0.6543 Remote Similarity NPC150239
0.6542 Remote Similarity NPC97388
0.654 Remote Similarity NPC271862
0.6534 Remote Similarity NPC38959
0.6534 Remote Similarity NPC327904
0.6533 Remote Similarity NPC99428
0.6529 Remote Similarity NPC264285
0.6527 Remote Similarity NPC323551
0.6527 Remote Similarity NPC475778
0.6527 Remote Similarity NPC318299
0.6527 Remote Similarity NPC280473
0.6525 Remote Similarity NPC321428
0.6524 Remote Similarity NPC471944
0.6522 Remote Similarity NPC472293
0.652 Remote Similarity NPC323752
0.652 Remote Similarity NPC323198
0.652 Remote Similarity NPC237702
0.6518 Remote Similarity NPC478078
0.6513 Remote Similarity NPC475165
0.6513 Remote Similarity NPC234999
0.6513 Remote Similarity NPC478083
0.6509 Remote Similarity NPC472296
0.6509 Remote Similarity NPC74413
0.6509 Remote Similarity NPC472297
0.6507 Remote Similarity NPC192306
0.6504 Remote Similarity NPC471979
0.65 Remote Similarity NPC51008
0.65 Remote Similarity NPC165837
0.65 Remote Similarity NPC473547
0.65 Remote Similarity NPC41724
0.6496 Remote Similarity NPC474116
0.6496 Remote Similarity NPC260900
0.6496 Remote Similarity NPC162730
0.6496 Remote Similarity NPC193761

  Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC475619 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.9043 High Similarity NPD8160 Phase 2
0.8756 High Similarity NPD7941 Phase 3
0.8287 Intermediate Similarity NPD8097 Phase 3
0.8287 Intermediate Similarity NPD8096 Phase 3
0.8104 Intermediate Similarity NPD7946 Pre-registration
0.7963 Intermediate Similarity NPD8098 Approved
0.7963 Intermediate Similarity NPD56 Approved
0.7963 Intermediate Similarity NPD8283 Approved
0.7963 Intermediate Similarity NPD8282 Approved
0.7854 Intermediate Similarity NPD8399 Phase 1
0.7854 Intermediate Similarity NPD8423 Phase 2
0.7464 Intermediate Similarity NPD7865 Approved
0.7085 Intermediate Similarity NPD5003 Discontinued
0.7043 Intermediate Similarity NPD4506 Discontinued
0.7021 Intermediate Similarity NPD7878 Phase 2
0.7014 Intermediate Similarity NPD2844 Phase 3
0.6977 Remote Similarity NPD7869 Discontinued
0.6953 Remote Similarity NPD6657 Clinical (unspecified phase)
0.6857 Remote Similarity NPD4373 Phase 2
0.6854 Remote Similarity NPD7866 Approved
0.6853 Remote Similarity NPD2509 Approved
0.6853 Remote Similarity NPD2510 Approved
0.6816 Remote Similarity NPD2564 Approved
0.6816 Remote Similarity NPD2565 Phase 2
0.6798 Remote Similarity NPD8395 Approved
0.6798 Remote Similarity NPD8396 Approved
0.6778 Remote Similarity NPD6770 Approved
0.6767 Remote Similarity NPD6732 Clinical (unspecified phase)
0.6735 Remote Similarity NPD4952 Phase 3
0.6729 Remote Similarity NPD7864 Approved
0.6724 Remote Similarity NPD3947 Discontinued
0.6707 Remote Similarity NPD7688 Phase 1
0.6695 Remote Similarity NPD7470 Discontinued
0.6694 Remote Similarity NPD6995 Phase 1
0.6679 Remote Similarity NPD8465 Approved
0.6679 Remote Similarity NPD8429 Approved
0.6679 Remote Similarity NPD8467 Approved
0.6679 Remote Similarity NPD8428 Approved
0.6679 Remote Similarity NPD8427 Approved
0.6679 Remote Similarity NPD8466 Approved
0.6653 Remote Similarity NPD6292 Clinical (unspecified phase)
0.6651 Remote Similarity NPD7863 Approved
0.664 Remote Similarity NPD6962 Phase 2
0.6626 Remote Similarity NPD6160 Clinical (unspecified phase)
0.6624 Remote Similarity NPD7001 Phase 3
0.6624 Remote Similarity NPD4901 Clinical (unspecified phase)
0.6609 Remote Similarity NPD7778 Approved
0.6609 Remote Similarity NPD2121 Clinical (unspecified phase)
0.6609 Remote Similarity NPD7777 Approved
0.6609 Remote Similarity NPD53 Approved
0.6583 Remote Similarity NPD3394 Approved
0.6583 Remote Similarity NPD3393 Approved
0.6583 Remote Similarity NPD3389 Approved
0.6581 Remote Similarity NPD8426 Approved
0.6581 Remote Similarity NPD8460 Approved
0.6581 Remote Similarity NPD8425 Approved
0.6581 Remote Similarity NPD8459 Approved
0.6569 Remote Similarity NPD3795 Approved
0.6569 Remote Similarity NPD3794 Approved
0.6564 Remote Similarity NPD5592 Clinical (unspecified phase)
0.6538 Remote Similarity NPD2920 Discontinued
0.6537 Remote Similarity NPD4987 Clinical (unspecified phase)
0.6511 Remote Similarity NPD5901 Discontinued
0.6504 Remote Similarity NPD4948 Discontinued
0.6483 Remote Similarity NPD8403 Phase 1
0.6468 Remote Similarity NPD6176 Phase 1
0.6441 Remote Similarity NPD6641 Approved
0.6441 Remote Similarity NPD6642 Approved
0.6438 Remote Similarity NPD7000 Clinical (unspecified phase)
0.6438 Remote Similarity NPD6248 Phase 2
0.6438 Remote Similarity NPD3800 Clinical (unspecified phase)
0.6438 Remote Similarity NPD6999 Discontinued
0.6438 Remote Similarity NPD6249 Phase 2
0.6432 Remote Similarity NPD7571 Clinical (unspecified phase)
0.6394 Remote Similarity NPD8364 Approved
0.6394 Remote Similarity NPD8363 Approved
0.6393 Remote Similarity NPD5632 Approved
0.6386 Remote Similarity NPD4328 Approved
0.6385 Remote Similarity NPD7769 Phase 3
0.6384 Remote Similarity NPD8464 Clinical (unspecified phase)
0.6375 Remote Similarity NPD4900 Clinical (unspecified phase)
0.6371 Remote Similarity NPD5426 Phase 3
0.6371 Remote Similarity NPD3925 Approved
0.6364 Remote Similarity NPD1573 Approved
0.6364 Remote Similarity NPD1575 Approved
0.636 Remote Similarity NPD7666 Phase 3
0.636 Remote Similarity NPD7665 Phase 2
0.6349 Remote Similarity NPD7070 Clinical (unspecified phase)
0.6347 Remote Similarity NPD8365 Clinical (unspecified phase)
0.6345 Remote Similarity NPD4862 Clinical (unspecified phase)
0.6341 Remote Similarity NPD3280 Approved
0.634 Remote Similarity NPD4501 Approved
0.634 Remote Similarity NPD4500 Approved
0.6338 Remote Similarity NPD7882 Clinical (unspecified phase)
0.6337 Remote Similarity NPD5417 Clinical (unspecified phase)
0.6337 Remote Similarity NPD4897 Phase 2
0.6329 Remote Similarity NPD5487 Phase 1
0.6327 Remote Similarity NPD5596 Phase 2
0.6325 Remote Similarity NPD8489 Phase 1
0.6322 Remote Similarity NPD7605 Discovery
0.6322 Remote Similarity NPD4852 Phase 2
0.6316 Remote Similarity NPD7708 Approved
0.6311 Remote Similarity NPD6733 Discontinued
0.6304 Remote Similarity NPD4499 Approved
0.6303 Remote Similarity NPD2721 Clinical (unspecified phase)
0.6285 Remote Similarity NPD6263 Clinical (unspecified phase)
0.6283 Remote Similarity NPD7803 Approved
0.6283 Remote Similarity NPD3178 Discontinued
0.6281 Remote Similarity NPD5475 Discontinued
0.6281 Remote Similarity NPD5416 Discontinued
0.6277 Remote Similarity NPD3785 Clinical (unspecified phase)
0.6276 Remote Similarity NPD2715 Clinical (unspecified phase)
0.6271 Remote Similarity NPD4600 Approved
0.6271 Remote Similarity NPD4601 Approved
0.627 Remote Similarity NPD5293 Phase 2
0.627 Remote Similarity NPD7589 Clinical (unspecified phase)
0.627 Remote Similarity NPD7707 Approved
0.6267 Remote Similarity NPD8304 Clinical (unspecified phase)
0.6255 Remote Similarity NPD6531 Approved
0.6255 Remote Similarity NPD6530 Approved
0.6245 Remote Similarity NPD8358 Approved
0.6239 Remote Similarity NPD1643 Phase 3
0.6234 Remote Similarity NPD6323 Clinical (unspecified phase)
0.6234 Remote Similarity NPD6987 Phase 1
0.6231 Remote Similarity NPD7921 Approved
0.6228 Remote Similarity NPD2096 Phase 2
0.6228 Remote Similarity NPD2091 Phase 2
0.622 Remote Similarity NPD8325 Phase 3
0.622 Remote Similarity NPD8327 Clinical (unspecified phase)
0.622 Remote Similarity NPD8326 Phase 3
0.6216 Remote Similarity NPD7770 Phase 3
0.6213 Remote Similarity NPD6206 Phase 1
0.6211 Remote Similarity NPD3006 Discontinued
0.621 Remote Similarity NPD1996 Discontinued
0.6208 Remote Similarity NPD3507 Phase 2
0.6206 Remote Similarity NPD5801 Clinical (unspecified phase)
0.6205 Remote Similarity NPD4736 Clinical (unspecified phase)
0.6202 Remote Similarity NPD2921 Clinical (unspecified phase)
0.619 Remote Similarity NPD6165 Phase 2
0.619 Remote Similarity NPD8279 Clinical (unspecified phase)
0.619 Remote Similarity NPD6164 Phase 2
0.6186 Remote Similarity NPD6261 Phase 3
0.6185 Remote Similarity NPD5506 Approved
0.6185 Remote Similarity NPD5507 Approved
0.6184 Remote Similarity NPD2092 Phase 2
0.6184 Remote Similarity NPD2095 Phase 2
0.6184 Remote Similarity NPD2094 Phase 2
0.6182 Remote Similarity NPD5140 Approved
0.6182 Remote Similarity NPD5138 Approved
0.618 Remote Similarity NPD4950 Approved
0.6176 Remote Similarity NPD7393 Clinical (unspecified phase)
0.6173 Remote Similarity NPD648 Clinical (unspecified phase)
0.6169 Remote Similarity NPD5483 Clinical (unspecified phase)
0.6169 Remote Similarity NPD3258 Approved
0.616 Remote Similarity NPD7621 Clinical (unspecified phase)
0.6157 Remote Similarity NPD7797 Approved
0.6157 Remote Similarity NPD7796 Approved
0.6154 Remote Similarity NPD6716 Phase 1
0.6148 Remote Similarity NPD6567 Clinical (unspecified phase)
0.6148 Remote Similarity NPD8013 Clinical (unspecified phase)
0.6142 Remote Similarity NPD5022 Discontinued
0.6142 Remote Similarity NPD8512 Phase 3
0.6132 Remote Similarity NPD6529 Discontinued
0.6123 Remote Similarity NPD5398 Clinical (unspecified phase)
0.6122 Remote Similarity NPD5866 Approved
0.6121 Remote Similarity NPD4334 Discontinued
0.6121 Remote Similarity NPD1534 Approved
0.6116 Remote Similarity NPD6739 Clinical (unspecified phase)
0.6109 Remote Similarity NPD1631 Approved
0.6097 Remote Similarity NPD7955 Approved
0.6097 Remote Similarity NPD7956 Approved
0.6096 Remote Similarity NPD6824 Clinical (unspecified phase)
0.6094 Remote Similarity NPD5151 Clinical (unspecified phase)
0.6094 Remote Similarity NPD3746 Discontinued
0.6093 Remote Similarity NPD7181 Phase 3
0.6091 Remote Similarity NPD7947 Clinical (unspecified phase)
0.609 Remote Similarity NPD7690 Clinical (unspecified phase)
0.6083 Remote Similarity NPD5721 Clinical (unspecified phase)
0.608 Remote Similarity NPD6242 Discontinued
0.6078 Remote Similarity NPD3390 Phase 2
0.6075 Remote Similarity NPD5482 Discontinued
0.6073 Remote Similarity NPD3757 Clinical (unspecified phase)
0.6073 Remote Similarity NPD8112 Clinical (unspecified phase)
0.6067 Remote Similarity NPD484 Approved
0.6067 Remote Similarity NPD8248 Clinical (unspecified phase)
0.6067 Remote Similarity NPD8463 Approved
0.6066 Remote Similarity NPD6456 Discontinued
0.6063 Remote Similarity NPD3259 Approved
0.6063 Remote Similarity NPD7268 Clinical (unspecified phase)
0.6059 Remote Similarity NPD5975 Clinical (unspecified phase)
0.6058 Remote Similarity NPD3777 Phase 3
0.6058 Remote Similarity NPD8072 Approved
0.6049 Remote Similarity NPD8322 Phase 2
0.6047 Remote Similarity NPD6142 Phase 3
0.6043 Remote Similarity NPD5728 Clinical (unspecified phase)
0.6041 Remote Similarity NPD7998 Clinical (unspecified phase)
0.604 Remote Similarity NPD6455 Phase 3
0.6038 Remote Similarity NPD1592 Phase 3
0.6035 Remote Similarity NPD749 Clinical (unspecified phase)
0.6034 Remote Similarity NPD5444 Phase 1

Structure

External Identifiers

PubChem CID  
ChEMBL   CHEMBL509432
ZINC  

Physicochemical Properties

Molecular Weight:  886.56
ALogP:  3.4469
MLogP:  6.41
XLogP:  13.859
# Rotatable Bonds:  34
Polar Surface Area:  147.26
# H-Bond Aceptor:  10
# H-Bond Donor:  3
# Rings:  6
# Heavy Atoms:  65

Download Data

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General Info & Identifiers & Properties  
Structure MOL file  
Source Organisms  
Biological Activities  
Similar NPs/Drugs