Natural Product: NPC471637

Natural Product ID:  NPC471637
Common Name:   Efomycin G
IUPAC Name:   (3E,5E,7S,8S,11E,13E,15S,16S)-8-[(2S,3R,4S)-4-[(2R,4R,5R,6R)-4-[(2R,4S,5S,6S)-4,5-dihydroxy-6-methyloxan-2-yl]oxy-5-ethyl-2-hydroxy-6-methyloxan-2-yl]-3-hydroxypentan-2-yl]-16-[(2S,3R,4S)-4-[(2R,4R,5R,6R)-4-[(2R,4S,5S,6S)-4,5-dihydroxy-6-methyloxan-2-yl]oxy-2-hydroxy-5,6-dimethyloxan-2-yl]-3-hydroxypentan-2-yl]-7,15-dimethyl-1,9-dioxacyclohexadeca-3,5,11,13-tetraene-2,10-dione
Synonyms:  
Molecular Formula:   C53H86O18
Standard InCHIKey:  SGWODLSBUBNJEQ-JGHNYVBJSA-N
Standard InCHI:  InChI=1S/C53H86O18/c1-13-37-34(10)71-53(63,25-41(37)67-45-23-39(55)49(61)36(12)65-45)32(8)47(59)30(6)51-27(3)19-15-17-20-42(56)68-50(26(2)18-14-16-21-43(57)69-51)29(5)46(58)31(7)52(62)24-40(28(4)33(9)70-52)66-44-22-38(54)48(60)35(11)64-44/h14-21,26-41,44-51,54-55,58-63H,13,22-25H2,1-12H3/b18-14+,19-15+,20-17+,21-16+/t26-,27-,28+,29-,30-,31-,32-,33+,34+,35-,36-,37+,38-,39-,40+,41+,44-,45-,46+,47+,48+,49+,50-,51-,52+,53+/m0/s1
Canonical SMILES:  CC[C@H]1[C@H](O[C@H]2C[C@H](O)[C@@H]([C@@H](O2)C)O)C[C@](O[C@@H]1C)(O)[C@H]([C@@H]([C@@H]([C@H]1OC(=O)/C=C/C=C/[C@H](C)[C@H](OC(=O)/C=C/C=C/[C@@H]1C)[C@H]([C@H]([C@@H]([C@@]1(O)C[C@@H](O[C@H]2C[C@H](O)[C@@H]([C@@H](O2)C)O)[C@@H]([C@H](O1)C)C)C)O)C)C)O)C
First Find Year:  
Max Developmental Stage:  
Synthetic Gene Cluster:   ;

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO32916 Streptomyces sp. 7-145 Species Streptomycetaceae Bacteria PMID[24164206]

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT16 Organism Staphylococcus aureus Staphylococcus aureus MIC = 2 ug/ml 8411013
NPT1204 Organism Enterococcus faecalis ATCC 29212 Enterococcus faecalis ATCC 29212 MIC = 2 ug/ml 8411013
NPT3495 Organism Morganella morganii Morganella morganii MIC > 64 ug/ml PubChem BioAssay data set
NPT19 Organism Escherichia coli Escherichia coli MIC > 64 ug/ml 10924160
NPT1531 Organism Enterococcus faecium Enterococcus faecium MIC > 64 ug/ml 10924160
NPT18 Organism Pseudomonas aeruginosa Pseudomonas aeruginosa MIC > 64 ug/ml 10924160
NPT2 Others Unspecified MIC > 64 ug/ml 10924160
NPT173 Organism Klebsiella pneumoniae Klebsiella pneumoniae MIC > 64 ug/ml 10924160
NPT175 Organism Enterococcus faecalis Enterococcus faecalis MIC = 16 ug/ml 19969457
NPT16 Organism Staphylococcus aureus Staphylococcus aureus MIC = 2 ug/ml 16499324
NPT729 Organism Micrococcus luteus Micrococcus luteus MIC = 2 ug/ml DrugMatrix in vitro pharmacology data
NPT1531 Organism Enterococcus faecium Enterococcus faecium MIC = 2 ug/ml 12662097
NPT175 Organism Enterococcus faecalis Enterococcus faecalis MIC = 2 ug/ml 11678661
NPT17 Organism Staphylococcus epidermidis Staphylococcus epidermidis MIC = 4 ug/ml 19805572
NPT1277 Organism Staphylococcus epidermidis ATCC 12228 Staphylococcus epidermidis ATCC 12228 MIC = 4 ug/ml 19805572
NPT175 Organism Enterococcus faecalis Enterococcus faecalis MIC = 4 ug/ml 19805572

  Similar Natural Products in NPASS

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC471637 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
1.0 High Similarity NPC57586
1.0 High Similarity NPC2313
1.0 High Similarity NPC475655
1.0 High Similarity NPC475157
1.0 High Similarity NPC154132
0.9588 High Similarity NPC315070
0.9583 High Similarity NPC197736
0.8866 High Similarity NPC475332
0.875 High Similarity NPC159698
0.8737 High Similarity NPC476075
0.8737 High Similarity NPC110072
0.8737 High Similarity NPC476084
0.8646 High Similarity NPC472196
0.8646 High Similarity NPC238090
0.8646 High Similarity NPC472195
0.8542 High Similarity NPC471324
0.8542 High Similarity NPC206679
0.8542 High Similarity NPC114172
0.8526 High Similarity NPC285588
0.8454 Intermediate Similarity NPC109406
0.8454 Intermediate Similarity NPC159092
0.8404 Intermediate Similarity NPC208473
0.8381 Intermediate Similarity NPC133625
0.8316 Intermediate Similarity NPC313658
0.8316 Intermediate Similarity NPC316138
0.8286 Intermediate Similarity NPC193765
0.82 Intermediate Similarity NPC288350
0.82 Intermediate Similarity NPC173329
0.82 Intermediate Similarity NPC255410
0.8191 Intermediate Similarity NPC473308
0.8191 Intermediate Similarity NPC266718
0.8182 Intermediate Similarity NPC477348
0.8182 Intermediate Similarity NPC256368
0.8182 Intermediate Similarity NPC238264
0.8182 Intermediate Similarity NPC477345
0.8172 Intermediate Similarity NPC251026
0.8155 Intermediate Similarity NPC201191
0.8125 Intermediate Similarity NPC475186
0.8125 Intermediate Similarity NPC199382
0.8125 Intermediate Similarity NPC118077
0.8119 Intermediate Similarity NPC120299
0.81 Intermediate Similarity NPC300710
0.8095 Intermediate Similarity NPC476740
0.8095 Intermediate Similarity NPC476738
0.8085 Intermediate Similarity NPC473315
0.8085 Intermediate Similarity NPC142111
0.8065 Intermediate Similarity NPC469469
0.8065 Intermediate Similarity NPC184208
0.8065 Intermediate Similarity NPC8538
0.8061 Intermediate Similarity NPC202886
0.8039 Intermediate Similarity NPC475653
0.8039 Intermediate Similarity NPC203627
0.802 Intermediate Similarity NPC476066
0.802 Intermediate Similarity NPC475525
0.802 Intermediate Similarity NPC475241
0.802 Intermediate Similarity NPC475375
0.802 Intermediate Similarity NPC473765
0.802 Intermediate Similarity NPC473605
0.802 Intermediate Similarity NPC475540
0.802 Intermediate Similarity NPC475164
0.802 Intermediate Similarity NPC475593
0.8 Intermediate Similarity NPC294293
0.798 Intermediate Similarity NPC477749
0.798 Intermediate Similarity NPC477349
0.7965 Intermediate Similarity NPC135369
0.7959 Intermediate Similarity NPC477748
0.7946 Intermediate Similarity NPC470515
0.7938 Intermediate Similarity NPC125142
0.7925 Intermediate Similarity NPC82251
0.7917 Intermediate Similarity NPC471494
0.7905 Intermediate Similarity NPC474581
0.7905 Intermediate Similarity NPC475367
0.7905 Intermediate Similarity NPC473816
0.7905 Intermediate Similarity NPC309398
0.79 Intermediate Similarity NPC320089
0.79 Intermediate Similarity NPC320552
0.7885 Intermediate Similarity NPC476611
0.7879 Intermediate Similarity NPC327253
0.7879 Intermediate Similarity NPC473311
0.7879 Intermediate Similarity NPC177668
0.7876 Intermediate Similarity NPC470517
0.7876 Intermediate Similarity NPC470911
0.7876 Intermediate Similarity NPC470915
0.7872 Intermediate Similarity NPC315731
0.7857 Intermediate Similarity NPC470137
0.7835 Intermediate Similarity NPC311163
0.783 Intermediate Similarity NPC469869
0.7822 Intermediate Similarity NPC44682
0.7822 Intermediate Similarity NPC163409
0.7822 Intermediate Similarity NPC472198
0.7818 Intermediate Similarity NPC321272
0.7818 Intermediate Similarity NPC328074
0.7818 Intermediate Similarity NPC317460
0.7818 Intermediate Similarity NPC470025
0.781 Intermediate Similarity NPC473596
0.78 Intermediate Similarity NPC472199
0.78 Intermediate Similarity NPC472197
0.7798 Intermediate Similarity NPC316708
0.7778 Intermediate Similarity NPC179261
0.7778 Intermediate Similarity NPC473807
0.7778 Intermediate Similarity NPC133450
0.7766 Intermediate Similarity NPC127295
0.7766 Intermediate Similarity NPC163362
0.7759 Intermediate Similarity NPC219804
0.7748 Intermediate Similarity NPC470027
0.7748 Intermediate Similarity NPC473159
0.7745 Intermediate Similarity NPC170204
0.7745 Intermediate Similarity NPC469543
0.7739 Intermediate Similarity NPC183353
0.7739 Intermediate Similarity NPC469812
0.7727 Intermediate Similarity NPC17791
0.7727 Intermediate Similarity NPC126897
0.7727 Intermediate Similarity NPC470026
0.7727 Intermediate Similarity NPC297945
0.7719 Intermediate Similarity NPC470914
0.7714 Intermediate Similarity NPC198992
0.7706 Intermediate Similarity NPC315836
0.7706 Intermediate Similarity NPC313668
0.77 Intermediate Similarity NPC3952
0.7692 Intermediate Similarity NPC471090
0.7685 Intermediate Similarity NPC109376
0.7677 Intermediate Similarity NPC248312
0.767 Intermediate Similarity NPC143446
0.7664 Intermediate Similarity NPC470768
0.7664 Intermediate Similarity NPC231271
0.7664 Intermediate Similarity NPC470519
0.766 Intermediate Similarity NPC139712
0.7629 Intermediate Similarity NPC475035
0.7627 Intermediate Similarity NPC297950
0.7615 Intermediate Similarity NPC392
0.7615 Intermediate Similarity NPC177524
0.7615 Intermediate Similarity NPC224660
0.7615 Intermediate Similarity NPC219900
0.7615 Intermediate Similarity NPC470024
0.7604 Intermediate Similarity NPC477390
0.7604 Intermediate Similarity NPC477385
0.7596 Intermediate Similarity NPC309503
0.7596 Intermediate Similarity NPC239547
0.7596 Intermediate Similarity NPC155319
0.7596 Intermediate Similarity NPC476612
0.7596 Intermediate Similarity NPC91197
0.7596 Intermediate Similarity NPC476613
0.7596 Intermediate Similarity NPC278506
0.7596 Intermediate Similarity NPC96597
0.7596 Intermediate Similarity NPC125551
0.7593 Intermediate Similarity NPC239961
0.7593 Intermediate Similarity NPC172867
0.7593 Intermediate Similarity NPC470763
0.7593 Intermediate Similarity NPC470767
0.7589 Intermediate Similarity NPC287075
0.7586 Intermediate Similarity NPC170880
0.7579 Intermediate Similarity NPC470147
0.7579 Intermediate Similarity NPC133226
0.7576 Intermediate Similarity NPC475037
0.7551 Intermediate Similarity NPC470124
0.7549 Intermediate Similarity NPC61201
0.7547 Intermediate Similarity NPC280991
0.7525 Intermediate Similarity NPC471569
0.7524 Intermediate Similarity NPC65700
0.7524 Intermediate Similarity NPC198422
0.7524 Intermediate Similarity NPC40182
0.7521 Intermediate Similarity NPC231888
0.7521 Intermediate Similarity NPC10121
0.7521 Intermediate Similarity NPC92283
0.7521 Intermediate Similarity NPC471082
0.7521 Intermediate Similarity NPC124878
0.7521 Intermediate Similarity NPC10883
0.7521 Intermediate Similarity NPC35338
0.7521 Intermediate Similarity NPC290276
0.7521 Intermediate Similarity NPC147032
0.7521 Intermediate Similarity NPC474423
0.7521 Intermediate Similarity NPC74259
0.7521 Intermediate Similarity NPC204214
0.7521 Intermediate Similarity NPC63404
0.7521 Intermediate Similarity NPC198918
0.75 Intermediate Similarity NPC220838
0.75 Intermediate Similarity NPC472268
0.75 Intermediate Similarity NPC476150
0.75 Intermediate Similarity NPC472269
0.75 Intermediate Similarity NPC87153
0.75 Intermediate Similarity NPC45606
0.75 Intermediate Similarity NPC472270
0.75 Intermediate Similarity NPC476127
0.75 Intermediate Similarity NPC23020
0.75 Intermediate Similarity NPC162925
0.75 Intermediate Similarity NPC112492
0.75 Intermediate Similarity NPC306041
0.7478 Intermediate Similarity NPC473828
0.7478 Intermediate Similarity NPC93688
0.7478 Intermediate Similarity NPC473617
0.7478 Intermediate Similarity NPC109603
0.7478 Intermediate Similarity NPC13710
0.7477 Intermediate Similarity NPC222062
0.7477 Intermediate Similarity NPC121423
0.7476 Intermediate Similarity NPC469491
0.7474 Intermediate Similarity NPC180725
0.7474 Intermediate Similarity NPC470148
0.7474 Intermediate Similarity NPC470149
0.7458 Intermediate Similarity NPC308262
0.7458 Intermediate Similarity NPC315783

  Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC471637 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.84 Intermediate Similarity NPD8029 Clinical (unspecified phase)
0.8061 Intermediate Similarity NPD7838 Discovery
0.7739 Intermediate Similarity NPD8516 Approved
0.7739 Intermediate Similarity NPD8515 Approved
0.7739 Intermediate Similarity NPD8517 Approved
0.7727 Intermediate Similarity NPD8413 Clinical (unspecified phase)
0.7615 Intermediate Similarity NPD6686 Approved
0.7586 Intermediate Similarity NPD8513 Phase 3
0.7525 Intermediate Similarity NPD46 Approved
0.7525 Intermediate Similarity NPD6698 Approved
0.7458 Intermediate Similarity NPD7829 Approved
0.7458 Intermediate Similarity NPD7830 Approved
0.7436 Intermediate Similarity NPD7503 Approved
0.735 Intermediate Similarity NPD8377 Approved
0.735 Intermediate Similarity NPD8294 Approved
0.7288 Intermediate Similarity NPD8296 Approved
0.7288 Intermediate Similarity NPD8033 Approved
0.7288 Intermediate Similarity NPD8335 Approved
0.7288 Intermediate Similarity NPD8380 Approved
0.7288 Intermediate Similarity NPD8378 Approved
0.7288 Intermediate Similarity NPD8379 Approved
0.7115 Intermediate Similarity NPD7983 Approved
0.7034 Intermediate Similarity NPD7327 Approved
0.7034 Intermediate Similarity NPD7328 Approved
0.7 Intermediate Similarity NPD8444 Approved
0.6992 Remote Similarity NPD8448 Approved
0.6975 Remote Similarity NPD7516 Approved
0.696 Remote Similarity NPD8390 Approved
0.696 Remote Similarity NPD8392 Approved
0.696 Remote Similarity NPD8391 Approved
0.6911 Remote Similarity NPD8451 Approved
0.6909 Remote Similarity NPD5344 Discontinued
0.6838 Remote Similarity NPD8133 Approved
0.6818 Remote Similarity NPD6648 Approved
0.6765 Remote Similarity NPD6400 Clinical (unspecified phase)
0.675 Remote Similarity NPD7641 Discontinued
0.672 Remote Similarity NPD8074 Phase 3
0.6697 Remote Similarity NPD7839 Suspended
0.6694 Remote Similarity NPD8299 Approved
0.6694 Remote Similarity NPD8340 Approved
0.6694 Remote Similarity NPD8341 Approved
0.6694 Remote Similarity NPD8342 Approved
0.664 Remote Similarity NPD7507 Approved
0.6613 Remote Similarity NPD8328 Phase 3
0.6613 Remote Similarity NPD7642 Approved
0.6609 Remote Similarity NPD6412 Phase 2
0.6484 Remote Similarity NPD7319 Approved
0.6466 Remote Similarity NPD7899 Clinical (unspecified phase)
0.6356 Remote Similarity NPD8132 Clinical (unspecified phase)
0.635 Remote Similarity NPD7266 Discontinued
0.6283 Remote Similarity NPD4225 Approved
0.6273 Remote Similarity NPD5778 Approved
0.6273 Remote Similarity NPD5779 Approved
0.6269 Remote Similarity NPD7966 Clinical (unspecified phase)
0.626 Remote Similarity NPD8295 Clinical (unspecified phase)
0.6239 Remote Similarity NPD8522 Clinical (unspecified phase)
0.6182 Remote Similarity NPD7637 Suspended
0.6167 Remote Similarity NPD6371 Approved
0.6147 Remote Similarity NPD6101 Approved
0.6147 Remote Similarity NPD5764 Clinical (unspecified phase)
0.614 Remote Similarity NPD7638 Approved
0.6129 Remote Similarity NPD7505 Discontinued
0.6111 Remote Similarity NPD4251 Approved
0.6111 Remote Similarity NPD4250 Approved
0.6087 Remote Similarity NPD7640 Approved
0.6087 Remote Similarity NPD7639 Approved
0.6058 Remote Similarity NPD5790 Clinical (unspecified phase)
0.6036 Remote Similarity NPD6411 Approved
0.6031 Remote Similarity NPD7736 Approved
0.6022 Remote Similarity NPD6123 Approved
0.6019 Remote Similarity NPD4249 Approved
0.6016 Remote Similarity NPD8080 Discontinued
0.6 Remote Similarity NPD7115 Discovery
0.6 Remote Similarity NPD8137 Clinical (unspecified phase)
0.6 Remote Similarity NPD7500 Approved
0.6 Remote Similarity NPD8273 Phase 1
0.5984 Remote Similarity NPD7116 Clinical (unspecified phase)
0.5963 Remote Similarity NPD7524 Approved
0.5946 Remote Similarity NPD5785 Approved
0.5935 Remote Similarity NPD6430 Approved
0.5935 Remote Similarity NPD6429 Approved
0.5935 Remote Similarity NPD6053 Discontinued
0.5931 Remote Similarity NPD8389 Clinical (unspecified phase)
0.5905 Remote Similarity NPD4820 Approved
0.5905 Remote Similarity NPD4819 Approved
0.5905 Remote Similarity NPD4822 Approved
0.5905 Remote Similarity NPD4821 Approved
0.5896 Remote Similarity NPD7260 Phase 2
0.5888 Remote Similarity NPD7154 Phase 3
0.5865 Remote Similarity NPD4268 Approved
0.5865 Remote Similarity NPD4271 Approved
0.5833 Remote Similarity NPD7338 Clinical (unspecified phase)
0.5826 Remote Similarity NPD4792 Clinical (unspecified phase)
0.582 Remote Similarity NPD4061 Clinical (unspecified phase)
0.5814 Remote Similarity NPD8274 Clinical (unspecified phase)
0.581 Remote Similarity NPD7329 Approved
0.5809 Remote Similarity NPD8450 Suspended
0.578 Remote Similarity NPD1733 Clinical (unspecified phase)
0.578 Remote Similarity NPD6082 Clinical (unspecified phase)
0.578 Remote Similarity NPD5363 Approved
0.5773 Remote Similarity NPD2685 Clinical (unspecified phase)
0.5769 Remote Similarity NPD5125 Phase 3
0.5769 Remote Similarity NPD6370 Approved
0.5769 Remote Similarity NPD5126 Approved
0.5766 Remote Similarity NPD8415 Approved
0.5764 Remote Similarity NPD7625 Phase 1
0.5741 Remote Similarity NPD6695 Phase 3
0.5739 Remote Similarity NPD1698 Clinical (unspecified phase)
0.5738 Remote Similarity NPD5345 Clinical (unspecified phase)
0.5735 Remote Similarity NPD8449 Approved
0.5728 Remote Similarity NPD8039 Approved
0.5725 Remote Similarity NPD8387 Clinical (unspecified phase)
0.5714 Remote Similarity NPD8293 Discontinued
0.5702 Remote Similarity NPD4211 Phase 1
0.5702 Remote Similarity NPD8171 Discontinued
0.5692 Remote Similarity NPD8267 Approved
0.5692 Remote Similarity NPD8268 Approved
0.5692 Remote Similarity NPD8266 Approved
0.5692 Remote Similarity NPD8269 Approved
0.5682 Remote Similarity NPD7492 Approved
0.568 Remote Similarity NPD8297 Approved
0.568 Remote Similarity NPD6882 Approved
0.568 Remote Similarity NPD969 Suspended
0.5676 Remote Similarity NPD7750 Discontinued
0.5672 Remote Similarity NPD8337 Approved
0.5672 Remote Similarity NPD8336 Approved
0.5667 Remote Similarity NPD1407 Approved
0.5648 Remote Similarity NPD6435 Approved
0.5648 Remote Similarity NPD5209 Approved
0.5645 Remote Similarity NPD6421 Discontinued
0.5645 Remote Similarity NPD5955 Clinical (unspecified phase)
0.5644 Remote Similarity NPD7532 Clinical (unspecified phase)
0.5639 Remote Similarity NPD6616 Approved
0.5625 Remote Similarity NPD6009 Approved
0.5621 Remote Similarity NPD8455 Phase 2
0.5615 Remote Similarity NPD6054 Approved
0.5615 Remote Similarity NPD6319 Approved
0.5615 Remote Similarity NPD7299 Clinical (unspecified phase)
0.5607 Remote Similarity NPD7332 Phase 2
0.5607 Remote Similarity NPD7514 Phase 3

Structure

External Identifiers

PubChem CID   76317050
ChEMBL   CHEMBL3086650
ZINC  

Physicochemical Properties

Molecular Weight:  1010.58
ALogP:  -4.0884
MLogP:  5.31
XLogP:  5.373
# Rotatable Bonds:  33
Polar Surface Area:  269.82
# H-Bond Aceptor:  18
# H-Bond Donor:  8
# Rings:  5
# Heavy Atoms:  71

Download Data

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General Info & Identifiers & Properties  
Structure MOL file  
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Biological Activities  
Similar NPs/Drugs