Natural Product: NPC260521

Natural Product ID:  NPC260521
Common Name:   Nilotinin M4
IUPAC Name:  
Synonyms:   Nilotinin M4
Molecular Formula:   C48H32O31
Standard InCHIKey:  YIECMEYDMBZCPR-AAUHFVRHSA-N
Standard InCHI:  InChI=1S/C48H32O31/c49-16-1-10(2-17(50)27(16)55)43(67)77-40-39-24(9-72-45(69)12-5-19(52)29(57)33(61)25(12)26-13(46(70)76-39)6-20(53)30(58)34(26)62)75-48-41(40)78-47(71)15-8-23(74-37-14(42(65)66)7-21(54)31(59)35(37)63)32(60)36(64)38(15)73-22-4-11(44(68)79-48)3-18(51)28(22)56/h1-8,24,39-41,48-64H,9H2,(H,65,66)/t24-,39-,40+,41-,48+/m1/s1
Canonical SMILES:  O=C1O[C@@H]2O[C@@H]3COC(=O)c4cc(O)c(c(c4c4c(C(=O)O[C@H]3[C@@H]([C@H]2OC(=O)c2c(Oc3cc1cc(O)c3O)c(O)c(c(c2)Oc1c(cc(c(c1O)O)O)C(=O)O)O)OC(=O)c1cc(O)c(c(c1)O)O)cc(O)c(c4O)O)O)O
First Find Year:  
Max Developmental Stage:  
Synthetic Gene Cluster:   ;

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO20417 Tamarix nilotica Species Tamaricaceae Eukaryota PMID[20405847]
NPO33012 myricaria bracteata Species Tamaricaceae Eukaryota PMID[25918997]

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT1 Others Radical scavenging activity IC50 = 3160 nM 12828466
NPT116 Cell Line HL-60 Homo sapiens CC50 = 30600 nM 9213587
NPT2385 Cell Line HSC-3 Homo sapiens CC50 = 57000 nM DrugMatrix in vitro pharmacology data
NPT2394 Cell Line HSC-4 Homo sapiens CC50 = 62000 nM 17845002
NPT924 Cell Line HSC-2 Homo sapiens CC50 = 35000 nM 7506311
NPT2 Others Unspecified IC50 = 37960 nM 24856903

  Similar Natural Products in NPASS

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC260521 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
1.0 High Similarity NPC469649
0.9942 High Similarity NPC240200
0.9942 High Similarity NPC223534
0.9942 High Similarity NPC290289
0.9942 High Similarity NPC158214
0.9884 High Similarity NPC31208
0.9884 High Similarity NPC472721
0.9884 High Similarity NPC93065
0.9884 High Similarity NPC469652
0.9884 High Similarity NPC160543
0.9884 High Similarity NPC187632
0.9884 High Similarity NPC472724
0.9884 High Similarity NPC472720
0.9827 High Similarity NPC40078
0.9827 High Similarity NPC97924
0.9827 High Similarity NPC471091
0.9825 High Similarity NPC261623
0.9825 High Similarity NPC111490
0.9825 High Similarity NPC469650
0.9653 High Similarity NPC65489
0.9649 High Similarity NPC8940
0.9605 High Similarity NPC189312
0.9605 High Similarity NPC3474
0.9598 High Similarity NPC477083
0.9598 High Similarity NPC477081
0.9538 High Similarity NPC231254
0.9497 High Similarity NPC174140
0.9492 High Similarity NPC477082
0.9477 High Similarity NPC472725
0.9477 High Similarity NPC80956
0.9477 High Similarity NPC472726
0.9379 High Similarity NPC264302
0.936 High Similarity NPC472723
0.9322 High Similarity NPC201814
0.9318 High Similarity NPC269625
0.9249 High Similarity NPC297574
0.9235 High Similarity NPC43918
0.9235 High Similarity NPC190204
0.9235 High Similarity NPC261411
0.9209 High Similarity NPC179947
0.9195 High Similarity NPC476618
0.9195 High Similarity NPC476619
0.9195 High Similarity NPC476622
0.9195 High Similarity NPC476620
0.9195 High Similarity NPC476621
0.9195 High Similarity NPC476623
0.9181 High Similarity NPC149300
0.9167 High Similarity NPC476358
0.9157 High Similarity NPC269046
0.9157 High Similarity NPC173872
0.9157 High Similarity NPC7839
0.9157 High Similarity NPC473618
0.9157 High Similarity NPC142291
0.9157 High Similarity NPC119094
0.9148 High Similarity NPC129533
0.9148 High Similarity NPC123259
0.9143 High Similarity NPC471030
0.9138 High Similarity NPC472991
0.9138 High Similarity NPC472992
0.9128 High Similarity NPC47521
0.9123 High Similarity NPC470271
0.9123 High Similarity NPC311389
0.9101 High Similarity NPC237202
0.9101 High Similarity NPC475179
0.9096 High Similarity NPC49690
0.9086 High Similarity NPC472387
0.907 High Similarity NPC198125
0.907 High Similarity NPC95421
0.9064 High Similarity NPC175793
0.9045 High Similarity NPC104910
0.9045 High Similarity NPC112380
0.9045 High Similarity NPC474093
0.904 High Similarity NPC297503
0.904 High Similarity NPC135831
0.904 High Similarity NPC97119
0.904 High Similarity NPC476203
0.9029 High Similarity NPC67629
0.9029 High Similarity NPC79736
0.9023 High Similarity NPC172033
0.9023 High Similarity NPC473550
0.9023 High Similarity NPC88560
0.9023 High Similarity NPC175230
0.9022 High Similarity NPC470450
0.9017 High Similarity NPC149011
0.9017 High Similarity NPC476365
0.9017 High Similarity NPC204937
0.9017 High Similarity NPC470272
0.9012 High Similarity NPC473818
0.8994 High Similarity NPC105591
0.8989 High Similarity NPC470416
0.8989 High Similarity NPC472722
0.8983 High Similarity NPC469371
0.8977 High Similarity NPC265380
0.8977 High Similarity NPC267549
0.8966 High Similarity NPC67134
0.8966 High Similarity NPC47140
0.8966 High Similarity NPC100251
0.8966 High Similarity NPC102851
0.8966 High Similarity NPC5786
0.8939 High Similarity NPC221140
0.8939 High Similarity NPC229817
0.8939 High Similarity NPC475220
0.8939 High Similarity NPC473686
0.8939 High Similarity NPC475352
0.8933 High Similarity NPC132111
0.8933 High Similarity NPC36138
0.8933 High Similarity NPC470718
0.8933 High Similarity NPC35924
0.8933 High Similarity NPC473631
0.8933 High Similarity NPC473717
0.8933 High Similarity NPC293227
0.8933 High Similarity NPC475662
0.8933 High Similarity NPC199172
0.8927 High Similarity NPC185275
0.8914 High Similarity NPC34436
0.8914 High Similarity NPC263119
0.8914 High Similarity NPC472993
0.8914 High Similarity NPC219600
0.8914 High Similarity NPC166674
0.8914 High Similarity NPC98583
0.8914 High Similarity NPC46640
0.8908 High Similarity NPC471416
0.8908 High Similarity NPC181778
0.8908 High Similarity NPC224462
0.8908 High Similarity NPC34287
0.8902 High Similarity NPC31034
0.8889 High Similarity NPC14030
0.8889 High Similarity NPC30011
0.8889 High Similarity NPC72554
0.8889 High Similarity NPC97817
0.8889 High Similarity NPC291957
0.8883 High Similarity NPC21359
0.8883 High Similarity NPC25946
0.8883 High Similarity NPC318119
0.8883 High Similarity NPC470717
0.8883 High Similarity NPC470455
0.8883 High Similarity NPC470451
0.8883 High Similarity NPC470713
0.8883 High Similarity NPC470720
0.8883 High Similarity NPC460984
0.8876 High Similarity NPC53680
0.8876 High Similarity NPC470452
0.8876 High Similarity NPC125352
0.8876 High Similarity NPC470453
0.8876 High Similarity NPC208797
0.8876 High Similarity NPC170203
0.8876 High Similarity NPC164047
0.8876 High Similarity NPC117668
0.8876 High Similarity NPC470448
0.887 High Similarity NPC113836
0.887 High Similarity NPC196127
0.887 High Similarity NPC471789
0.887 High Similarity NPC37668
0.887 High Similarity NPC253521
0.887 High Similarity NPC258044
0.887 High Similarity NPC267680
0.887 High Similarity NPC217387
0.887 High Similarity NPC293626
0.8864 High Similarity NPC142996
0.8864 High Similarity NPC102028
0.8857 High Similarity NPC48773
0.8857 High Similarity NPC205076
0.8857 High Similarity NPC211594
0.8857 High Similarity NPC472386
0.8857 High Similarity NPC65333
0.8857 High Similarity NPC307518
0.8857 High Similarity NPC259152
0.8857 High Similarity NPC172807
0.8857 High Similarity NPC3583
0.8857 High Similarity NPC254540
0.8851 High Similarity NPC183036
0.8851 High Similarity NPC658
0.8851 High Similarity NPC471457
0.8851 High Similarity NPC170675
0.8851 High Similarity NPC197708
0.8851 High Similarity NPC112755
0.884 High Similarity NPC41845
0.8837 High Similarity NPC470898
0.8833 High Similarity NPC470719
0.8833 High Similarity NPC87583
0.8833 High Similarity NPC295625
0.8833 High Similarity NPC473554
0.8827 High Similarity NPC470449
0.8827 High Similarity NPC156785
0.8827 High Similarity NPC321916
0.8827 High Similarity NPC241781
0.8827 High Similarity NPC150977
0.8827 High Similarity NPC470447
0.8827 High Similarity NPC470446
0.8827 High Similarity NPC470445
0.8827 High Similarity NPC162394
0.8824 High Similarity NPC104222
0.8824 High Similarity NPC114791
0.8824 High Similarity NPC318826
0.8824 High Similarity NPC210501
0.8824 High Similarity NPC141331
0.882 High Similarity NPC245059
0.882 High Similarity NPC212290
0.882 High Similarity NPC324742
0.882 High Similarity NPC84494

  Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC260521 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.8778 High Similarity NPD8397 Clinical (unspecified phase)
0.8757 High Similarity NPD4338 Clinical (unspecified phase)
0.8706 High Similarity NPD4868 Clinical (unspecified phase)
0.8693 High Similarity NPD7472 Approved
0.8693 High Similarity NPD7074 Phase 3
0.8644 High Similarity NPD7993 Clinical (unspecified phase)
0.8636 High Similarity NPD7054 Approved
0.8603 High Similarity NPD8312 Approved
0.8603 High Similarity NPD8313 Approved
0.858 High Similarity NPD3818 Discontinued
0.8547 High Similarity NPD7808 Phase 3
0.8492 Intermediate Similarity NPD7251 Discontinued
0.8436 Intermediate Similarity NPD6797 Phase 2
0.8427 Intermediate Similarity NPD5844 Phase 1
0.8378 Intermediate Similarity NPD7879 Clinical (unspecified phase)
0.8372 Intermediate Similarity NPD1465 Phase 2
0.8362 Intermediate Similarity NPD6168 Clinical (unspecified phase)
0.8362 Intermediate Similarity NPD6167 Clinical (unspecified phase)
0.8362 Intermediate Similarity NPD6166 Phase 2
0.8333 Intermediate Similarity NPD4381 Clinical (unspecified phase)
0.8299 Intermediate Similarity NPD8151 Discontinued
0.8249 Intermediate Similarity NPD6232 Discontinued
0.8212 Intermediate Similarity NPD7473 Discontinued
0.8208 Intermediate Similarity NPD1934 Approved
0.8192 Intermediate Similarity NPD6959 Discontinued
0.8167 Intermediate Similarity NPD7228 Approved
0.8161 Intermediate Similarity NPD2801 Approved
0.8122 Intermediate Similarity NPD7804 Clinical (unspecified phase)
0.8057 Intermediate Similarity NPD2393 Clinical (unspecified phase)
0.8057 Intermediate Similarity NPD7819 Suspended
0.8057 Intermediate Similarity NPD8455 Phase 2
0.8056 Intermediate Similarity NPD7852 Clinical (unspecified phase)
0.7989 Intermediate Similarity NPD6559 Discontinued
0.7978 Intermediate Similarity NPD6234 Discontinued
0.7966 Intermediate Similarity NPD7768 Phase 2
0.794 Intermediate Similarity NPD7783 Phase 2
0.794 Intermediate Similarity NPD7782 Clinical (unspecified phase)
0.7933 Intermediate Similarity NPD5494 Approved
0.7921 Intermediate Similarity NPD7075 Discontinued
0.7921 Intermediate Similarity NPD3749 Approved
0.7914 Intermediate Similarity NPD8055 Clinical (unspecified phase)
0.791 Intermediate Similarity NPD3817 Phase 2
0.7889 Intermediate Similarity NPD7199 Phase 2
0.7874 Intermediate Similarity NPD1653 Approved
0.7869 Intermediate Similarity NPD3751 Discontinued
0.7865 Intermediate Similarity NPD3882 Suspended
0.7857 Intermediate Similarity NPD7435 Discontinued
0.7845 Intermediate Similarity NPD3787 Discontinued
0.7817 Intermediate Similarity NPD7870 Phase 2
0.7817 Intermediate Similarity NPD7871 Phase 2
0.7809 Intermediate Similarity NPD8443 Clinical (unspecified phase)
0.7809 Intermediate Similarity NPD5402 Approved
0.7802 Intermediate Similarity NPD7184 Clinical (unspecified phase)
0.7797 Intermediate Similarity NPD37 Approved
0.7796 Intermediate Similarity NPD7240 Approved
0.7796 Intermediate Similarity NPD7685 Pre-registration
0.7784 Intermediate Similarity NPD4380 Phase 2
0.7765 Intermediate Similarity NPD4965 Approved
0.7765 Intermediate Similarity NPD4967 Phase 2
0.7765 Intermediate Similarity NPD4966 Approved
0.7753 Intermediate Similarity NPD7096 Clinical (unspecified phase)
0.7746 Intermediate Similarity NPD1511 Approved
0.774 Intermediate Similarity NPD7411 Suspended
0.7714 Intermediate Similarity NPD6980 Clinical (unspecified phase)
0.7711 Intermediate Similarity NPD7875 Clinical (unspecified phase)
0.7711 Intermediate Similarity NPD7874 Approved
0.7704 Intermediate Similarity NPD6778 Approved
0.7704 Intermediate Similarity NPD6777 Approved
0.7704 Intermediate Similarity NPD6781 Approved
0.7704 Intermediate Similarity NPD6782 Approved
0.7704 Intermediate Similarity NPD6776 Approved
0.7704 Intermediate Similarity NPD6779 Approved
0.7704 Intermediate Similarity NPD6780 Approved
0.7677 Intermediate Similarity NPD7696 Phase 3
0.7677 Intermediate Similarity NPD7698 Approved
0.7677 Intermediate Similarity NPD7697 Approved
0.7657 Intermediate Similarity NPD1512 Approved
0.7612 Intermediate Similarity NPD7701 Phase 2
0.7558 Intermediate Similarity NPD1549 Phase 2
0.7538 Intermediate Similarity NPD6823 Phase 2
0.7513 Intermediate Similarity NPD7699 Phase 2
0.7513 Intermediate Similarity NPD7700 Phase 2
0.7512 Intermediate Similarity NPD8155 Clinical (unspecified phase)
0.75 Intermediate Similarity NPD1550 Clinical (unspecified phase)
0.75 Intermediate Similarity NPD1552 Clinical (unspecified phase)
0.75 Intermediate Similarity NPD6801 Discontinued
0.75 Intermediate Similarity NPD7801 Approved
0.7471 Intermediate Similarity NPD3750 Approved
0.7457 Intermediate Similarity NPD970 Clinical (unspecified phase)
0.7449 Intermediate Similarity NPD6534 Approved
0.7449 Intermediate Similarity NPD6535 Approved
0.7443 Intermediate Similarity NPD6143 Clinical (unspecified phase)
0.7443 Intermediate Similarity NPD7390 Discontinued
0.7443 Intermediate Similarity NPD6799 Approved
0.7416 Intermediate Similarity NPD5403 Approved
0.7413 Intermediate Similarity NPD7680 Approved
0.7409 Intermediate Similarity NPD8150 Discontinued
0.7401 Intermediate Similarity NPD2533 Approved
0.7401 Intermediate Similarity NPD7410 Clinical (unspecified phase)
0.7401 Intermediate Similarity NPD2534 Approved
0.7401 Intermediate Similarity NPD2532 Approved
0.7389 Intermediate Similarity NPD6599 Discontinued
0.7387 Intermediate Similarity NPD7237 Clinical (unspecified phase)
0.7376 Intermediate Similarity NPD8320 Phase 1
0.7376 Intermediate Similarity NPD8319 Approved
0.7333 Intermediate Similarity NPD7458 Discontinued
0.733 Intermediate Similarity NPD6190 Approved
0.7326 Intermediate Similarity NPD3926 Phase 2
0.731 Intermediate Similarity NPD230 Phase 1
0.7303 Intermediate Similarity NPD5401 Approved
0.7303 Intermediate Similarity NPD4378 Clinical (unspecified phase)
0.7303 Intermediate Similarity NPD7422 Clinical (unspecified phase)
0.7299 Intermediate Similarity NPD7266 Discontinued
0.7283 Intermediate Similarity NPD1510 Phase 2
0.7241 Intermediate Similarity NPD2935 Discontinued
0.7241 Intermediate Similarity NPD2796 Approved
0.7238 Intermediate Similarity NPD3226 Approved
0.7238 Intermediate Similarity NPD5808 Clinical (unspecified phase)
0.7231 Intermediate Similarity NPD8434 Phase 2
0.7222 Intermediate Similarity NPD6212 Phase 3
0.7222 Intermediate Similarity NPD6213 Phase 3
0.7222 Intermediate Similarity NPD6214 Clinical (unspecified phase)
0.7219 Intermediate Similarity NPD1247 Approved
0.7209 Intermediate Similarity NPD1933 Approved
0.7207 Intermediate Similarity NPD7004 Clinical (unspecified phase)
0.7204 Intermediate Similarity NPD919 Approved
0.7184 Intermediate Similarity NPD3748 Approved
0.7178 Intermediate Similarity NPD7501 Clinical (unspecified phase)
0.7175 Intermediate Similarity NPD4628 Phase 3
0.7151 Intermediate Similarity NPD1612 Clinical (unspecified phase)
0.7151 Intermediate Similarity NPD1613 Approved
0.7151 Intermediate Similarity NPD943 Approved
0.7143 Intermediate Similarity NPD5406 Approved
0.7143 Intermediate Similarity NPD5405 Approved
0.7143 Intermediate Similarity NPD1551 Phase 2
0.7143 Intermediate Similarity NPD5408 Approved
0.7143 Intermediate Similarity NPD5404 Approved
0.7128 Intermediate Similarity NPD7090 Clinical (unspecified phase)
0.7128 Intermediate Similarity NPD8127 Discontinued
0.7119 Intermediate Similarity NPD7421 Clinical (unspecified phase)
0.7119 Intermediate Similarity NPD6674 Discontinued
0.7114 Intermediate Similarity NPD8090 Clinical (unspecified phase)
0.711 Intermediate Similarity NPD447 Suspended
0.709 Intermediate Similarity NPD7229 Phase 3
0.7079 Intermediate Similarity NPD1878 Clinical (unspecified phase)
0.7071 Intermediate Similarity NPD4287 Approved
0.7059 Intermediate Similarity NPD1530 Clinical (unspecified phase)
0.7053 Intermediate Similarity NPD7584 Approved
0.7052 Intermediate Similarity NPD1240 Approved
0.7035 Intermediate Similarity NPD6859 Clinical (unspecified phase)
0.7026 Intermediate Similarity NPD7549 Discontinued
0.7018 Intermediate Similarity NPD8059 Phase 3
0.7018 Intermediate Similarity NPD8058 Clinical (unspecified phase)
0.7018 Intermediate Similarity NPD1529 Clinical (unspecified phase)
0.7006 Intermediate Similarity NPD2346 Discontinued
0.7005 Intermediate Similarity NPD7211 Clinical (unspecified phase)
0.7 Intermediate Similarity NPD5710 Approved
0.7 Intermediate Similarity NPD5711 Approved
0.6989 Remote Similarity NPD651 Clinical (unspecified phase)
0.6983 Remote Similarity NPD6398 Clinical (unspecified phase)
0.6983 Remote Similarity NPD8166 Discontinued
0.6983 Remote Similarity NPD7003 Approved
0.6981 Remote Similarity NPD7930 Approved
0.6971 Remote Similarity NPD1607 Approved
0.6959 Remote Similarity NPD5619 Clinical (unspecified phase)
0.6952 Remote Similarity NPD5353 Approved
0.6943 Remote Similarity NPD7177 Discontinued
0.6942 Remote Similarity NPD5005 Approved
0.6942 Remote Similarity NPD5006 Approved
0.694 Remote Similarity NPD920 Approved
0.6938 Remote Similarity NPD7585 Approved
0.6923 Remote Similarity NPD642 Clinical (unspecified phase)
0.6923 Remote Similarity NPD5953 Discontinued
0.6907 Remote Similarity NPD7286 Phase 2
0.6893 Remote Similarity NPD1509 Clinical (unspecified phase)
0.689 Remote Similarity NPD7583 Approved
0.6879 Remote Similarity NPD3027 Phase 3
0.6875 Remote Similarity NPD5242 Approved
0.6854 Remote Similarity NPD6100 Approved
0.6854 Remote Similarity NPD6099 Approved
0.6839 Remote Similarity NPD3764 Approved
0.6836 Remote Similarity NPD7097 Phase 1
0.6833 Remote Similarity NPD2800 Approved
0.6833 Remote Similarity NPD1243 Approved
0.6829 Remote Similarity NPD4420 Approved
0.6821 Remote Similarity NPD6832 Phase 2
0.6821 Remote Similarity NPD4908 Phase 1
0.6816 Remote Similarity NPD2344 Approved
0.6813 Remote Similarity NPD643 Clinical (unspecified phase)
0.68 Remote Similarity NPD6233 Phase 2
0.6798 Remote Similarity NPD2799 Discontinued
0.6796 Remote Similarity NPD8285 Discontinued
0.6793 Remote Similarity NPD6273 Approved
0.6789 Remote Similarity NPD7907 Approved
0.6772 Remote Similarity NPD4288 Approved
0.6766 Remote Similarity NPD6842 Approved
0.6766 Remote Similarity NPD6841 Approved
0.6766 Remote Similarity NPD6843 Phase 3
0.6765 Remote Similarity NPD9269 Phase 2
0.6744 Remote Similarity NPD1203 Approved

Structure

External Identifiers

PubChem CID   46833715
ChEMBL   CHEMBL1096301
ZINC  

Physicochemical Properties

Molecular Weight:  1104.09
ALogP:  -8.5802
MLogP:  3.33
XLogP:  -0.327
# Rotatable Bonds:  23
Polar Surface Area:  520.17
# H-Bond Aceptor:  13
# H-Bond Donor:  17
# Rings:  9
# Heavy Atoms:  79

Download Data

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General Info & Identifiers & Properties  
Structure MOL file  
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Biological Activities  
Similar NPs/Drugs