Natural Product: NPC170333

Natural Product ID:  NPC170333
Common Name:   Glycocitrine-I
IUPAC Name:   1,3,5-trihydroxy-10-methyl-4-(3-methylbut-2-enyl)acridin-9-one
Synonyms:   Glycocitrine-I
Molecular Formula:   C19H19NO4
Standard InCHIKey:  OPPJKACRWCPJGU-UHFFFAOYSA-N
Standard InCHI:  InChI=1S/C19H19NO4/c1-10(2)7-8-11-14(22)9-15(23)16-18(11)20(3)17-12(19(16)24)5-4-6-13(17)21/h4-7,9,21-23H,8H2,1-3H3
Canonical SMILES:  CC(=CCc1c(O)cc(c2c1n(C)c1c(O)cccc1c2=O)O)C
First Find Year:  
Max Developmental Stage:  
Synthetic Gene Cluster:   ;

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO14038 Oriciopsis glaberrima NA NA NA UNPD*
NPO7221 Korolkowia sewerzowi NA NA NA UNPD*
NPO5476 Hortia arborea Species Rutaceae Eukaryota UNPD*
NPO2786 Clematis flammula Species Ranunculaceae Eukaryota UNPD*
NPO10647 Gentiana lactea Species Gentianaceae Eukaryota UNPD*
NPO14038 Oriciopsis glaberrima NA NA NA TCMID*

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT601 Individual Protein Cathepsin L2 Homo sapiens IC50 = 25000 nM 21277783
NPT601 Individual Protein Cathepsin L2 Homo sapiens Ki = 10000 nM 21277783

  Similar Natural Products in NPASS

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC170333 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
0.9454 High Similarity NPC212123
0.9451 High Similarity NPC133156
0.9202 High Similarity NPC305542
0.9053 High Similarity NPC30749
0.9029 High Similarity NPC298320
0.8995 High Similarity NPC474366
0.8848 High Similarity NPC218303
0.8827 High Similarity NPC7560
0.8808 High Similarity NPC176113
0.8808 High Similarity NPC148391
0.8711 High Similarity NPC2905
0.8673 High Similarity NPC182853
0.866 High Similarity NPC114468
0.8636 High Similarity NPC76478
0.8607 High Similarity NPC13249
0.8579 High Similarity NPC134702
0.8557 High Similarity NPC285254
0.8541 High Similarity NPC114039
0.8541 High Similarity NPC206109
0.8526 High Similarity NPC15987
0.845 Intermediate Similarity NPC118189
0.8446 Intermediate Similarity NPC198160
0.84 Intermediate Similarity NPC204867
0.8367 Intermediate Similarity NPC220241
0.8367 Intermediate Similarity NPC295479
0.8325 Intermediate Similarity NPC116178
0.8283 Intermediate Similarity NPC321166
0.8283 Intermediate Similarity NPC268223
0.8283 Intermediate Similarity NPC217903
0.822 Intermediate Similarity NPC234933
0.8144 Intermediate Similarity NPC288759
0.8119 Intermediate Similarity NPC87560
0.8119 Intermediate Similarity NPC195120
0.8095 Intermediate Similarity NPC1820
0.8061 Intermediate Similarity NPC313112
0.8061 Intermediate Similarity NPC301292
0.8 Intermediate Similarity NPC329830
0.7951 Intermediate Similarity NPC157983
0.7951 Intermediate Similarity NPC118154
0.7897 Intermediate Similarity NPC241263
0.766 Intermediate Similarity NPC474815
0.7627 Intermediate Similarity NPC144691
0.7487 Intermediate Similarity NPC327005
0.7371 Intermediate Similarity NPC132751
0.7366 Intermediate Similarity NPC299582
0.7333 Intermediate Similarity NPC288854
0.729 Intermediate Similarity NPC251071
0.7273 Intermediate Similarity NPC70340
0.7211 Intermediate Similarity NPC112336
0.7211 Intermediate Similarity NPC474814
0.7166 Intermediate Similarity NPC199737
0.7071 Intermediate Similarity NPC150308
0.7065 Intermediate Similarity NPC56170
0.7062 Intermediate Similarity NPC9475
0.7059 Intermediate Similarity NPC17677
0.7053 Intermediate Similarity NPC41216
0.7045 Intermediate Similarity NPC166480
0.7045 Intermediate Similarity NPC282780
0.7028 Intermediate Similarity NPC470481
0.7028 Intermediate Similarity NPC470482
0.7005 Intermediate Similarity NPC1464
0.699 Remote Similarity NPC166169
0.6976 Remote Similarity NPC218733
0.6976 Remote Similarity NPC265642
0.6976 Remote Similarity NPC138615
0.6976 Remote Similarity NPC132874
0.6976 Remote Similarity NPC112937
0.6959 Remote Similarity NPC469439
0.6954 Remote Similarity NPC474998
0.6944 Remote Similarity NPC242994
0.6944 Remote Similarity NPC138099
0.6942 Remote Similarity NPC317727
0.6936 Remote Similarity NPC162612
0.6936 Remote Similarity NPC103356
0.6936 Remote Similarity NPC169250
0.6936 Remote Similarity NPC30501
0.6936 Remote Similarity NPC98254
0.6936 Remote Similarity NPC105157
0.6936 Remote Similarity NPC266689
0.6936 Remote Similarity NPC72158
0.6936 Remote Similarity NPC100067
0.6936 Remote Similarity NPC190043
0.6936 Remote Similarity NPC23126
0.6931 Remote Similarity NPC93653
0.6927 Remote Similarity NPC33507
0.6923 Remote Similarity NPC129578
0.6906 Remote Similarity NPC181560
0.6906 Remote Similarity NPC169452
0.6904 Remote Similarity NPC98416
0.69 Remote Similarity NPC262725
0.6897 Remote Similarity NPC473017
0.6897 Remote Similarity NPC221777
0.6897 Remote Similarity NPC21305
0.6893 Remote Similarity NPC83019
0.6891 Remote Similarity NPC471778
0.6888 Remote Similarity NPC127082
0.6884 Remote Similarity NPC302235
0.6881 Remote Similarity NPC469437
0.6879 Remote Similarity NPC62952
0.6879 Remote Similarity NPC8745
0.6879 Remote Similarity NPC267846
0.6875 Remote Similarity NPC155792
0.6875 Remote Similarity NPC471489
0.6872 Remote Similarity NPC194764
0.6872 Remote Similarity NPC478075
0.6872 Remote Similarity NPC264112
0.6872 Remote Similarity NPC65005
0.6869 Remote Similarity NPC309692
0.6865 Remote Similarity NPC241392
0.6854 Remote Similarity NPC25961
0.6847 Remote Similarity NPC92803
0.6845 Remote Similarity NPC204580
0.6839 Remote Similarity NPC116513
0.6834 Remote Similarity NPC99723
0.6833 Remote Similarity NPC53414
0.6833 Remote Similarity NPC53206
0.6833 Remote Similarity NPC471905
0.6832 Remote Similarity NPC18890
0.6831 Remote Similarity NPC193555
0.6821 Remote Similarity NPC73280
0.6821 Remote Similarity NPC10926
0.6816 Remote Similarity NPC43218
0.6808 Remote Similarity NPC477825
0.6798 Remote Similarity NPC213485
0.6798 Remote Similarity NPC40524
0.6798 Remote Similarity NPC139074
0.6794 Remote Similarity NPC232600
0.6791 Remote Similarity NPC68967
0.6791 Remote Similarity NPC477826
0.6791 Remote Similarity NPC477827
0.6784 Remote Similarity NPC472163
0.678 Remote Similarity NPC470485
0.678 Remote Similarity NPC471825
0.678 Remote Similarity NPC78284
0.678 Remote Similarity NPC475042
0.6778 Remote Similarity NPC254847
0.6778 Remote Similarity NPC191976
0.6776 Remote Similarity NPC297322
0.6763 Remote Similarity NPC13238
0.6761 Remote Similarity NPC109123
0.6761 Remote Similarity NPC329567
0.6761 Remote Similarity NPC207873
0.6761 Remote Similarity NPC92624
0.6761 Remote Similarity NPC100573
0.6761 Remote Similarity NPC330683
0.676 Remote Similarity NPC44437
0.6757 Remote Similarity NPC477394
0.6756 Remote Similarity NPC227033
0.6752 Remote Similarity NPC317567
0.6749 Remote Similarity NPC329790
0.6744 Remote Similarity NPC220337
0.6742 Remote Similarity NPC175738
0.6739 Remote Similarity NPC135524
0.6734 Remote Similarity NPC85613
0.673 Remote Similarity NPC317572
0.6723 Remote Similarity NPC259942
0.6722 Remote Similarity NPC283590
0.6722 Remote Similarity NPC130899
0.6722 Remote Similarity NPC70859
0.6722 Remote Similarity NPC61153
0.6717 Remote Similarity NPC477187
0.6716 Remote Similarity NPC208890
0.6715 Remote Similarity NPC303214
0.6714 Remote Similarity NPC308943
0.6714 Remote Similarity NPC469732
0.6712 Remote Similarity NPC94842
0.6704 Remote Similarity NPC267205
0.6702 Remote Similarity NPC37135
0.6702 Remote Similarity NPC186397
0.6698 Remote Similarity NPC470484
0.6698 Remote Similarity NPC163829
0.6697 Remote Similarity NPC253314
0.6686 Remote Similarity NPC305717
0.6685 Remote Similarity NPC246638
0.6685 Remote Similarity NPC118919
0.6685 Remote Similarity NPC305845
0.6685 Remote Similarity NPC204045
0.6684 Remote Similarity NPC85393
0.6684 Remote Similarity NPC110882
0.6684 Remote Similarity NPC271944
0.6683 Remote Similarity NPC316282
0.6683 Remote Similarity NPC470483
0.6682 Remote Similarity NPC122886
0.6681 Remote Similarity NPC289905
0.6681 Remote Similarity NPC316065
0.6667 Remote Similarity NPC476119
0.6667 Remote Similarity NPC477828
0.6667 Remote Similarity NPC158551
0.6667 Remote Similarity NPC475088
0.6667 Remote Similarity NPC23294
0.6667 Remote Similarity NPC223988
0.6667 Remote Similarity NPC21599
0.6667 Remote Similarity NPC143438
0.6667 Remote Similarity NPC264938
0.6667 Remote Similarity NPC246140
0.6667 Remote Similarity NPC193703
0.6667 Remote Similarity NPC266499
0.6667 Remote Similarity NPC195787
0.6653 Remote Similarity NPC132385
0.6652 Remote Similarity NPC151171

  Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC170333 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.8535 High Similarity NPD2899 Discontinued
0.7868 Intermediate Similarity NPD7071 Clinical (unspecified phase)
0.759 Intermediate Similarity NPD5937 Approved
0.7421 Intermediate Similarity NPD6020 Phase 2
0.7228 Intermediate Similarity NPD5194 Approved
0.7228 Intermediate Similarity NPD5197 Approved
0.7228 Intermediate Similarity NPD5196 Approved
0.7184 Intermediate Similarity NPD3298 Approved
0.715 Intermediate Similarity NPD5496 Approved
0.7122 Intermediate Similarity NPD7566 Clinical (unspecified phase)
0.7095 Intermediate Similarity NPD5860 Discontinued
0.7092 Intermediate Similarity NPD3253 Clinical (unspecified phase)
0.7041 Intermediate Similarity NPD5637 Discontinued
0.7024 Intermediate Similarity NPD6874 Approved
0.7024 Intermediate Similarity NPD3297 Approved
0.701 Intermediate Similarity NPD5195 Discontinued
0.7009 Intermediate Similarity NPD8461 Discontinued
0.7005 Intermediate Similarity NPD4419 Clinical (unspecified phase)
0.6995 Remote Similarity NPD1220 Phase 1
0.6977 Remote Similarity NPD3949 Clinical (unspecified phase)
0.6974 Remote Similarity NPD1221 Approved
0.6971 Remote Similarity NPD7064 Clinical (unspecified phase)
0.697 Remote Similarity NPD6525 Clinical (unspecified phase)
0.6959 Remote Similarity NPD7449 Clinical (unspecified phase)
0.6959 Remote Similarity NPD5433 Clinical (unspecified phase)
0.6946 Remote Similarity NPD5610 Approved
0.6942 Remote Similarity NPD5608 Approved
0.6942 Remote Similarity NPD5609 Approved
0.692 Remote Similarity NPD6625 Approved
0.6908 Remote Similarity NPD7501 Clinical (unspecified phase)
0.6901 Remote Similarity NPD1945 Phase 1
0.6869 Remote Similarity NPD6104 Discontinued
0.6869 Remote Similarity NPD7301 Phase 3
0.6857 Remote Similarity NPD4456 Clinical (unspecified phase)
0.6845 Remote Similarity NPD3229 Phase 2
0.6842 Remote Similarity NPD956 Clinical (unspecified phase)
0.6842 Remote Similarity NPD6795 Clinical (unspecified phase)
0.684 Remote Similarity NPD4082 Approved
0.6812 Remote Similarity NPD4668 Phase 2
0.681 Remote Similarity NPD7597 Clinical (unspecified phase)
0.6804 Remote Similarity NPD3783 Clinical (unspecified phase)
0.6804 Remote Similarity NPD5183 Approved
0.6804 Remote Similarity NPD5186 Approved
0.6792 Remote Similarity NPD4596 Phase 1
0.6778 Remote Similarity NPD1509 Clinical (unspecified phase)
0.6777 Remote Similarity NPD4467 Phase 2
0.6777 Remote Similarity NPD4465 Phase 2
0.6761 Remote Similarity NPD7302 Phase 3
0.6761 Remote Similarity NPD4022 Approved
0.6761 Remote Similarity NPD7300 Phase 3
0.6761 Remote Similarity NPD2906 Approved
0.6761 Remote Similarity NPD2907 Approved
0.6761 Remote Similarity NPD3472 Approved
0.6756 Remote Similarity NPD8067 Phase 3
0.6752 Remote Similarity NPD8367 Approved
0.6752 Remote Similarity NPD3986 Discontinued
0.6741 Remote Similarity NPD7654 Discontinued
0.6728 Remote Similarity NPD4562 Clinical (unspecified phase)
0.6727 Remote Similarity NPD7858 Clinical (unspecified phase)
0.6716 Remote Similarity NPD5928 Phase 1
0.6714 Remote Similarity NPD6973 Clinical (unspecified phase)
0.6709 Remote Similarity NPD8492 Approved
0.6698 Remote Similarity NPD3372 Discontinued
0.6698 Remote Similarity NPD1294 Discontinued
0.6684 Remote Similarity NPD1913 Phase 1
0.6667 Remote Similarity NPD4363 Phase 3
0.6667 Remote Similarity NPD4360 Phase 2
0.665 Remote Similarity NPD5968 Phase 3
0.6648 Remote Similarity NPD943 Approved
0.6638 Remote Similarity NPD1483 Discontinued
0.6637 Remote Similarity NPD6199 Discontinued
0.6637 Remote Similarity NPD4981 Phase 2
0.6636 Remote Similarity NPD7293 Approved
0.6636 Remote Similarity NPD6198 Phase 1
0.6636 Remote Similarity NPD4494 Approved
0.6636 Remote Similarity NPD4492 Approved
0.6635 Remote Similarity NPD4361 Phase 2
0.6635 Remote Similarity NPD4362 Clinical (unspecified phase)
0.6633 Remote Similarity NPD3793 Phase 3
0.6623 Remote Similarity NPD7922 Phase 1
0.6617 Remote Similarity NPD5027 Approved
0.6617 Remote Similarity NPD5031 Approved
0.6617 Remote Similarity NPD5029 Approved
0.6616 Remote Similarity NPD3446 Phase 1
0.6615 Remote Similarity NPD5823 Approved
0.6613 Remote Similarity NPD6884 Clinical (unspecified phase)
0.6585 Remote Similarity NPD6608 Clinical (unspecified phase)
0.6561 Remote Similarity NPD7292 Approved
0.6558 Remote Similarity NPD7584 Approved
0.6537 Remote Similarity NPD4515 Suspended
0.6537 Remote Similarity NPD5037 Approved
0.6537 Remote Similarity NPD5038 Approved
0.6526 Remote Similarity NPD5005 Approved
0.6526 Remote Similarity NPD5006 Approved
0.6524 Remote Similarity NPD7238 Clinical (unspecified phase)
0.6524 Remote Similarity NPD4979 Clinical (unspecified phase)
0.6524 Remote Similarity NPD6621 Clinical (unspecified phase)
0.6522 Remote Similarity NPD6656 Clinical (unspecified phase)
0.6516 Remote Similarity NPD3940 Clinical (unspecified phase)
0.6515 Remote Similarity NPD5242 Approved
0.6514 Remote Similarity NPD4493 Discontinued
0.6489 Remote Similarity NPD7390 Discontinued
0.6488 Remote Similarity NPD5036 Approved
0.6486 Remote Similarity NPD9277 Approved
0.6486 Remote Similarity NPD75 Approved
0.6485 Remote Similarity NPD6293 Clinical (unspecified phase)
0.6473 Remote Similarity NPD6836 Approved
0.6468 Remote Similarity NPD4997 Clinical (unspecified phase)
0.6468 Remote Similarity NPD3893 Discontinued
0.6465 Remote Similarity NPD1839 Phase 1
0.6465 Remote Similarity NPD5711 Approved
0.6465 Remote Similarity NPD5710 Approved
0.646 Remote Similarity NPD3925 Approved
0.6459 Remote Similarity NPD4539 Phase 1
0.6455 Remote Similarity NPD4888 Discontinued
0.6452 Remote Similarity NPD6593 Clinical (unspecified phase)
0.645 Remote Similarity NPD5033 Approved
0.6438 Remote Similarity NPD683 Approved
0.6436 Remote Similarity NPD4956 Approved
0.6436 Remote Similarity NPD7479 Phase 2
0.6436 Remote Similarity NPD5190 Phase 2
0.6435 Remote Similarity NPD6807 Phase 3
0.6432 Remote Similarity NPD9275 Approved
0.6432 Remote Similarity NPD9278 Suspended
0.6432 Remote Similarity NPD9274 Approved
0.6432 Remote Similarity NPD9276 Approved
0.6425 Remote Similarity NPD2672 Discontinued
0.6425 Remote Similarity NPD1898 Discontinued
0.6418 Remote Similarity NPD2361 Approved
0.6418 Remote Similarity NPD5940 Clinical (unspecified phase)
0.6417 Remote Similarity NPD1196 Approved
0.6415 Remote Similarity NPD5071 Phase 2
0.6414 Remote Similarity NPD5488 Discontinued
0.6414 Remote Similarity NPD2821 Approved
0.6409 Remote Similarity NPD1527 Phase 2
0.6409 Remote Similarity NPD3888 Discontinued
0.6407 Remote Similarity NPD6741 Clinical (unspecified phase)
0.6404 Remote Similarity NPD6211 Clinical (unspecified phase)
0.6404 Remote Similarity NPD6654 Clinical (unspecified phase)
0.6404 Remote Similarity NPD3899 Clinical (unspecified phase)
0.6404 Remote Similarity NPD5445 Approved
0.6402 Remote Similarity NPD1543 Discontinued
0.6395 Remote Similarity NPD4846 Phase 2
0.6393 Remote Similarity NPD5726 Clinical (unspecified phase)
0.6389 Remote Similarity NPD5102 Clinical (unspecified phase)
0.6386 Remote Similarity NPD4603 Phase 2
0.6383 Remote Similarity NPD6790 Phase 1
0.638 Remote Similarity NPD4455 Discontinued
0.6376 Remote Similarity NPD7585 Approved
0.6373 Remote Similarity NPD3684 Discontinued
0.6373 Remote Similarity NPD5039 Approved
0.6368 Remote Similarity NPD3423 Phase 2
0.6368 Remote Similarity NPD2359 Approved
0.6368 Remote Similarity NPD6162 Approved
0.6368 Remote Similarity NPD3422 Phase 3
0.6368 Remote Similarity NPD6161 Approved
0.6368 Remote Similarity NPD4378 Clinical (unspecified phase)
0.6364 Remote Similarity NPD1195 Approved
0.6364 Remote Similarity NPD1625 Approved
0.6359 Remote Similarity NPD2393 Clinical (unspecified phase)
0.6356 Remote Similarity NPD3437 Discontinued
0.6355 Remote Similarity NPD2339 Phase 3
0.6345 Remote Similarity NPD955 Approved
0.6344 Remote Similarity NPD7279 Phase 2
0.6344 Remote Similarity NPD7278 Phase 2
0.6341 Remote Similarity NPD4955 Approved
0.6341 Remote Similarity NPD36 Approved
0.6341 Remote Similarity NPD5034 Approved
0.6341 Remote Similarity NPD5026 Approved
0.6341 Remote Similarity NPD5028 Approved
0.6341 Remote Similarity NPD4954 Approved
0.634 Remote Similarity NPD4561 Discontinued
0.6339 Remote Similarity NPD1926 Approved
0.6338 Remote Similarity NPD4420 Approved
0.6337 Remote Similarity NPD5603 Clinical (unspecified phase)
0.6335 Remote Similarity NPD9509 Clinical (unspecified phase)
0.633 Remote Similarity NPD7583 Approved
0.633 Remote Similarity NPD5143 Clinical (unspecified phase)
0.633 Remote Similarity NPD7263 Phase 2
0.633 Remote Similarity NPD7043 Discontinued
0.6326 Remote Similarity NPD6321 Discontinued
0.6325 Remote Similarity NPD2300 Clinical (unspecified phase)
0.6324 Remote Similarity NPD1510 Phase 2
0.6323 Remote Similarity NPD7475 Clinical (unspecified phase)
0.6318 Remote Similarity NPD2248 Approved
0.6318 Remote Similarity NPD648 Clinical (unspecified phase)
0.6318 Remote Similarity NPD3377 Discontinued
0.6318 Remote Similarity NPD2246 Approved
0.6316 Remote Similarity NPD2421 Approved
0.6316 Remote Similarity NPD2420 Approved
0.6314 Remote Similarity NPD7417 Discontinued
0.6313 Remote Similarity NPD1168 Approved
0.6308 Remote Similarity NPD6844 Discontinued
0.6305 Remote Similarity NPD5521 Clinical (unspecified phase)
0.6301 Remote Similarity NPD7701 Phase 2
0.6296 Remote Similarity NPD6017 Discontinued
0.6293 Remote Similarity NPD5151 Clinical (unspecified phase)
0.6293 Remote Similarity NPD5030 Phase 2
0.6289 Remote Similarity NPD4380 Phase 2
0.6289 Remote Similarity NPD6585 Discontinued

Structure

External Identifiers

PubChem CID   11580650
ChEMBL   CHEMBL1668598
ZINC  

Physicochemical Properties

Molecular Weight:  325.13
ALogP:  0.3482
MLogP:  3
XLogP:  2.127
# Rotatable Bonds:  8
Polar Surface Area:  81
# H-Bond Aceptor:  2
# H-Bond Donor:  3
# Rings:  3
# Heavy Atoms:  24

Download Data

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Structure MOL file  
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Biological Activities  
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