Natural Product: NPC146636

Natural Product ID:  NPC146636
Common Name:   Sophonorol C
IUPAC Name:   (3S)-3,5-dihydroxy-3-(5-methoxy-2,2-dimethyl-3,4-dihydrochromen-6-yl)-8,8-dimethyl-9,10-dihydro-2H-pyrano[2,3-h]chromen-4-one
Synonyms:   Sophonorol C
Molecular Formula:   C26H30O7
Standard InCHIKey:  VTNVBSWKRFKHFA-AREMUKBSSA-N
Standard InCHI:  InChI=1S/C26H30O7/c1-24(2)10-8-14-18(32-24)7-6-16(21(14)30-5)26(29)13-31-22-15-9-11-25(3,4)33-19(15)12-17(27)20(22)23(26)28/h6-7,12,27,29H,8-11,13H2,1-5H3/t26-/m1/s1
Canonical SMILES:  COc1c2CCC(Oc2ccc1[C@]1(O)COc2c(C1=O)c(O)cc1c2CCC(O1)(C)C)(C)C
First Find Year:  
Max Developmental Stage:  
Synthetic Gene Cluster:   ;

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO3544 Sophora mollis Species Fabaceae Eukaryota roots PMID[19572738]

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT6 Organism Plasmodium falciparum Plasmodium falciparum IC50 = 12900 nM 23454532

  Similar Natural Products in NPASS

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC146636 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
0.9667 High Similarity NPC476169
0.9664 High Similarity NPC210597
0.96 High Similarity NPC209760
0.96 High Similarity NPC100134
0.9536 High Similarity NPC471116
0.947 High Similarity NPC203080
0.9467 High Similarity NPC471229
0.9463 High Similarity NPC277032
0.9408 High Similarity NPC207809
0.9408 High Similarity NPC259710
0.9408 High Similarity NPC48579
0.9408 High Similarity NPC304207
0.9408 High Similarity NPC217706
0.9404 High Similarity NPC475790
0.94 High Similarity NPC267117
0.9342 High Similarity NPC248793
0.9342 High Similarity NPC180301
0.9342 High Similarity NPC236756
0.9342 High Similarity NPC311579
0.9338 High Similarity NPC319910
0.9338 High Similarity NPC254412
0.9338 High Similarity NPC474021
0.9338 High Similarity NPC262038
0.9338 High Similarity NPC474023
0.9338 High Similarity NPC278476
0.9338 High Similarity NPC262039
0.9329 High Similarity NPC472918
0.9299 High Similarity NPC62261
0.9281 High Similarity NPC477958
0.9281 High Similarity NPC111341
0.9281 High Similarity NPC304745
0.9276 High Similarity NPC217149
0.9276 High Similarity NPC171651
0.9276 High Similarity NPC216035
0.9276 High Similarity NPC35567
0.9276 High Similarity NPC243171
0.9276 High Similarity NPC138288
0.9272 High Similarity NPC105136
0.9272 High Similarity NPC471115
0.9272 High Similarity NPC29777
0.9267 High Similarity NPC296869
0.9245 High Similarity NPC326877
0.9245 High Similarity NPC177480
0.9236 High Similarity NPC63438
0.9221 High Similarity NPC215917
0.9221 High Similarity NPC10754
0.9221 High Similarity NPC20530
0.9216 High Similarity NPC472583
0.9216 High Similarity NPC469405
0.9216 High Similarity NPC20907
0.9216 High Similarity NPC268193
0.9216 High Similarity NPC223701
0.9216 High Similarity NPC112701
0.9216 High Similarity NPC244250
0.9216 High Similarity NPC109594
0.9216 High Similarity NPC326592
0.9216 High Similarity NPC7989
0.9216 High Similarity NPC88983
0.9216 High Similarity NPC293286
0.9211 High Similarity NPC263384
0.9211 High Similarity NPC244577
0.9211 High Similarity NPC471677
0.9211 High Similarity NPC471676
0.9211 High Similarity NPC472636
0.9211 High Similarity NPC472422
0.9211 High Similarity NPC472420
0.9205 High Similarity NPC473016
0.92 High Similarity NPC308200
0.9187 High Similarity NPC74559
0.9182 High Similarity NPC8965
0.9167 High Similarity NPC471976
0.9156 High Similarity NPC477530
0.915 High Similarity NPC150123
0.915 High Similarity NPC56232
0.915 High Similarity NPC244583
0.915 High Similarity NPC473996
0.915 High Similarity NPC161881
0.915 High Similarity NPC10807
0.9139 High Similarity NPC39195
0.9139 High Similarity NPC145467
0.9139 High Similarity NPC244407
0.9133 High Similarity NPC124729
0.9133 High Similarity NPC229190
0.9108 High Similarity NPC173137
0.9108 High Similarity NPC3629
0.9103 High Similarity NPC311574
0.9103 High Similarity NPC264932
0.9103 High Similarity NPC123544
0.9085 High Similarity NPC328740
0.9085 High Similarity NPC472580
0.9085 High Similarity NPC477897
0.9085 High Similarity NPC289774
0.9085 High Similarity NPC209846
0.9085 High Similarity NPC471675
0.9079 High Similarity NPC472628
0.9079 High Similarity NPC471114
0.9073 High Similarity NPC211466
0.9073 High Similarity NPC14001
0.9073 High Similarity NPC296998
0.9073 High Similarity NPC40086
0.9073 High Similarity NPC166757
0.9073 High Similarity NPC3779
0.9073 High Similarity NPC122828
0.9073 High Similarity NPC476182
0.9073 High Similarity NPC176869
0.9073 High Similarity NPC472627
0.9073 High Similarity NPC473077
0.9073 High Similarity NPC44721
0.9068 High Similarity NPC8704
0.9068 High Similarity NPC287884
0.9067 High Similarity NPC216538
0.9067 High Similarity NPC271288
0.9067 High Similarity NPC273538
0.9067 High Similarity NPC311144
0.9057 High Similarity NPC224280
0.9057 High Similarity NPC234052
0.9051 High Similarity NPC52204
0.9051 High Similarity NPC259834
0.9051 High Similarity NPC472402
0.9051 High Similarity NPC474150
0.9051 High Similarity NPC474162
0.9045 High Similarity NPC172687
0.9038 High Similarity NPC161650
0.9038 High Similarity NPC210048
0.9038 High Similarity NPC471209
0.9032 High Similarity NPC275575
0.9032 High Similarity NPC470681
0.9026 High Similarity NPC327269
0.9026 High Similarity NPC477957
0.9026 High Similarity NPC31627
0.9026 High Similarity NPC476238
0.902 High Similarity NPC472633
0.902 High Similarity NPC472421
0.902 High Similarity NPC61258
0.9013 High Similarity NPC266572
0.9013 High Similarity NPC161191
0.9007 High Similarity NPC306488
0.9007 High Similarity NPC20488
0.9007 High Similarity NPC477955
0.9007 High Similarity NPC246948
0.9007 High Similarity NPC5820
0.9007 High Similarity NPC83357
0.9007 High Similarity NPC88964
0.9007 High Similarity NPC299011
0.9007 High Similarity NPC267375
0.9007 High Similarity NPC214774
0.9007 High Similarity NPC54577
0.9007 High Similarity NPC111786
0.9007 High Similarity NPC301276
0.9007 High Similarity NPC470647
0.9007 High Similarity NPC195621
0.9007 High Similarity NPC312973
0.9007 High Similarity NPC472629
0.9007 High Similarity NPC67805
0.9007 High Similarity NPC176229
0.9007 High Similarity NPC475052
0.9007 High Similarity NPC142405
0.9007 High Similarity NPC220418
0.9007 High Similarity NPC178343
0.9006 High Similarity NPC152477
0.9006 High Similarity NPC242395
0.9 High Similarity NPC24821
0.9 High Similarity NPC113770
0.9 High Similarity NPC212932
0.9 High Similarity NPC219915
0.9 High Similarity NPC9117
0.9 High Similarity NPC316816
0.9 High Similarity NPC120593
0.9 High Similarity NPC106985
0.9 High Similarity NPC190637
0.9 High Similarity NPC478086
0.9 High Similarity NPC82330
0.9 High Similarity NPC166138
0.9 High Similarity NPC214166
0.9 High Similarity NPC471213
0.9 High Similarity NPC293053
0.9 High Similarity NPC18585
0.8994 High Similarity NPC146134
0.8994 High Similarity NPC183672
0.8994 High Similarity NPC41301
0.8994 High Similarity NPC472581
0.8994 High Similarity NPC472625
0.8987 High Similarity NPC472632
0.8987 High Similarity NPC134783
0.8987 High Similarity NPC471210
0.8981 High Similarity NPC152904
0.8981 High Similarity NPC125969
0.8981 High Similarity NPC55738
0.8981 High Similarity NPC295090
0.8981 High Similarity NPC22192
0.8981 High Similarity NPC473990
0.8974 High Similarity NPC208152
0.8974 High Similarity NPC470600
0.8974 High Similarity NPC69531
0.8974 High Similarity NPC78492
0.8961 High Similarity NPC474744
0.8961 High Similarity NPC474772
0.8961 High Similarity NPC472423
0.8961 High Similarity NPC325429
0.8954 High Similarity NPC470461

  Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC146636 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.9067 High Similarity NPD4378 Clinical (unspecified phase)
0.8917 High Similarity NPD7075 Discontinued
0.8896 High Similarity NPD4380 Phase 2
0.8889 High Similarity NPD7804 Clinical (unspecified phase)
0.8846 High Similarity NPD7096 Clinical (unspecified phase)
0.8846 High Similarity NPD2393 Clinical (unspecified phase)
0.882 High Similarity NPD6168 Clinical (unspecified phase)
0.882 High Similarity NPD6167 Clinical (unspecified phase)
0.882 High Similarity NPD6166 Phase 2
0.8671 High Similarity NPD8443 Clinical (unspecified phase)
0.8662 High Similarity NPD6801 Discontinued
0.8662 High Similarity NPD1934 Approved
0.8634 High Similarity NPD6959 Discontinued
0.86 High Similarity NPD1550 Clinical (unspecified phase)
0.86 High Similarity NPD1552 Clinical (unspecified phase)
0.8571 High Similarity NPD7410 Clinical (unspecified phase)
0.8562 High Similarity NPD4381 Clinical (unspecified phase)
0.8543 High Similarity NPD1549 Phase 2
0.8506 High Similarity NPD6799 Approved
0.85 High Similarity NPD3882 Suspended
0.8494 Intermediate Similarity NPD7074 Phase 3
0.8491 Intermediate Similarity NPD2801 Approved
0.8481 Intermediate Similarity NPD7411 Suspended
0.8457 Intermediate Similarity NPD5494 Approved
0.8443 Intermediate Similarity NPD6797 Phase 2
0.8418 Intermediate Similarity NPD6599 Discontinued
0.8397 Intermediate Similarity NPD1512 Approved
0.8393 Intermediate Similarity NPD7251 Discontinued
0.8375 Intermediate Similarity NPD7819 Suspended
0.8364 Intermediate Similarity NPD7852 Clinical (unspecified phase)
0.8344 Intermediate Similarity NPD1510 Phase 2
0.8343 Intermediate Similarity NPD7808 Phase 3
0.8323 Intermediate Similarity NPD7054 Approved
0.8323 Intermediate Similarity NPD3817 Phase 2
0.8289 Intermediate Similarity NPD2796 Approved
0.8274 Intermediate Similarity NPD7472 Approved
0.8269 Intermediate Similarity NPD1511 Approved
0.8247 Intermediate Similarity NPD2800 Approved
0.82 Intermediate Similarity NPD1240 Approved
0.816 Intermediate Similarity NPD7768 Phase 2
0.816 Intermediate Similarity NPD4868 Clinical (unspecified phase)
0.8129 Intermediate Similarity NPD4338 Clinical (unspecified phase)
0.8118 Intermediate Similarity NPD7993 Clinical (unspecified phase)
0.8113 Intermediate Similarity NPD5403 Approved
0.811 Intermediate Similarity NPD3749 Approved
0.8098 Intermediate Similarity NPD5402 Approved
0.8092 Intermediate Similarity NPD1607 Approved
0.8047 Intermediate Similarity NPD3818 Discontinued
0.8024 Intermediate Similarity NPD6232 Discontinued
0.7988 Intermediate Similarity NPD7473 Discontinued
0.7987 Intermediate Similarity NPD5401 Approved
0.7966 Intermediate Similarity NPD7879 Clinical (unspecified phase)
0.7965 Intermediate Similarity NPD6559 Discontinued
0.7962 Intermediate Similarity NPD3750 Approved
0.7927 Intermediate Similarity NPD1465 Phase 2
0.7898 Intermediate Similarity NPD7421 Clinical (unspecified phase)
0.7895 Intermediate Similarity NPD5844 Phase 1
0.7888 Intermediate Similarity NPD920 Approved
0.7875 Intermediate Similarity NPD2532 Approved
0.7875 Intermediate Similarity NPD2534 Approved
0.7875 Intermediate Similarity NPD2533 Approved
0.7836 Intermediate Similarity NPD3751 Discontinued
0.7829 Intermediate Similarity NPD4907 Clinical (unspecified phase)
0.7811 Intermediate Similarity NPD3787 Discontinued
0.7791 Intermediate Similarity NPD7286 Phase 2
0.7756 Intermediate Similarity NPD2799 Discontinued
0.7751 Intermediate Similarity NPD1247 Approved
0.7742 Intermediate Similarity NPD6651 Approved
0.7736 Intermediate Similarity NPD4628 Phase 3
0.7722 Intermediate Similarity NPD970 Clinical (unspecified phase)
0.7714 Intermediate Similarity NPD4419 Clinical (unspecified phase)
0.7712 Intermediate Similarity NPD6859 Clinical (unspecified phase)
0.7707 Intermediate Similarity NPD2935 Discontinued
0.7707 Intermediate Similarity NPD1551 Phase 2
0.7701 Intermediate Similarity NPD5953 Discontinued
0.7697 Intermediate Similarity NPD4908 Phase 1
0.767 Intermediate Similarity NPD8313 Approved
0.767 Intermediate Similarity NPD8312 Approved
0.7663 Intermediate Similarity NPD6779 Approved
0.7663 Intermediate Similarity NPD6780 Approved
0.7663 Intermediate Similarity NPD6782 Approved
0.7663 Intermediate Similarity NPD6777 Approved
0.7663 Intermediate Similarity NPD6781 Approved
0.7663 Intermediate Similarity NPD6776 Approved
0.7663 Intermediate Similarity NPD6778 Approved
0.7661 Intermediate Similarity NPD3926 Phase 2
0.7658 Intermediate Similarity NPD2344 Approved
0.7654 Intermediate Similarity NPD642 Clinical (unspecified phase)
0.7643 Intermediate Similarity NPD3748 Approved
0.7633 Intermediate Similarity NPD919 Approved
0.7597 Intermediate Similarity NPD2313 Discontinued
0.7596 Intermediate Similarity NPD8090 Clinical (unspecified phase)
0.7595 Intermediate Similarity NPD6099 Approved
0.7595 Intermediate Similarity NPD6100 Approved
0.7593 Intermediate Similarity NPD7390 Discontinued
0.7582 Intermediate Similarity NPD4360 Phase 2
0.7582 Intermediate Similarity NPD4363 Phase 3
0.7576 Intermediate Similarity NPD3226 Approved
0.7562 Intermediate Similarity NPD1243 Approved
0.7547 Intermediate Similarity NPD2346 Discontinued
0.7542 Intermediate Similarity NPD8150 Discontinued
0.754 Intermediate Similarity NPD7697 Approved
0.754 Intermediate Similarity NPD7696 Phase 3
0.754 Intermediate Similarity NPD7698 Approved
0.754 Intermediate Similarity NPD7435 Discontinued
0.7532 Intermediate Similarity NPD1509 Clinical (unspecified phase)
0.7531 Intermediate Similarity NPD643 Clinical (unspecified phase)
0.7516 Intermediate Similarity NPD1878 Clinical (unspecified phase)
0.7514 Intermediate Similarity NPD2403 Approved
0.75 Intermediate Similarity NPD943 Approved
0.75 Intermediate Similarity NPD8455 Phase 2
0.7474 Intermediate Similarity NPD7701 Phase 2
0.747 Intermediate Similarity NPD7458 Discontinued
0.7469 Intermediate Similarity NPD2309 Approved
0.7467 Intermediate Similarity NPD1610 Phase 2
0.7448 Intermediate Similarity NPD7782 Clinical (unspecified phase)
0.7448 Intermediate Similarity NPD7783 Phase 2
0.7444 Intermediate Similarity NPD8434 Phase 2
0.7421 Intermediate Similarity NPD7584 Approved
0.7407 Intermediate Similarity NPD7871 Phase 2
0.7407 Intermediate Similarity NPD6398 Clinical (unspecified phase)
0.7407 Intermediate Similarity NPD7870 Phase 2
0.7399 Intermediate Similarity NPD5711 Approved
0.7399 Intermediate Similarity NPD5710 Approved
0.7391 Intermediate Similarity NPD2424 Discontinued
0.7391 Intermediate Similarity NPD6535 Approved
0.7391 Intermediate Similarity NPD6534 Approved
0.7389 Intermediate Similarity NPD1612 Clinical (unspecified phase)
0.7389 Intermediate Similarity NPD1613 Approved
0.7389 Intermediate Similarity NPD8055 Clinical (unspecified phase)
0.7381 Intermediate Similarity NPD7615 Clinical (unspecified phase)
0.738 Intermediate Similarity NPD7501 Clinical (unspecified phase)
0.7372 Intermediate Similarity NPD6798 Discontinued
0.7366 Intermediate Similarity NPD7700 Phase 2
0.7366 Intermediate Similarity NPD7699 Phase 2
0.7363 Intermediate Similarity NPD8397 Clinical (unspecified phase)
0.7355 Intermediate Similarity NPD1529 Clinical (unspecified phase)
0.7351 Intermediate Similarity NPD1547 Clinical (unspecified phase)
0.7344 Intermediate Similarity NPD8151 Discontinued
0.7342 Intermediate Similarity NPD5123 Clinical (unspecified phase)
0.7342 Intermediate Similarity NPD6355 Discontinued
0.7342 Intermediate Similarity NPD5124 Phase 1
0.7316 Intermediate Similarity NPD8320 Phase 1
0.7316 Intermediate Similarity NPD8319 Approved
0.7312 Intermediate Similarity NPD7033 Discontinued
0.7312 Intermediate Similarity NPD651 Clinical (unspecified phase)
0.7308 Intermediate Similarity NPD4625 Phase 3
0.7306 Intermediate Similarity NPD7874 Approved
0.7306 Intermediate Similarity NPD7875 Clinical (unspecified phase)
0.729 Intermediate Similarity NPD1530 Clinical (unspecified phase)
0.7278 Intermediate Similarity NPD4060 Phase 1
0.7273 Intermediate Similarity NPD1203 Approved
0.7268 Intermediate Similarity NPD7801 Approved
0.7261 Intermediate Similarity NPD3268 Approved
0.7258 Intermediate Similarity NPD4362 Clinical (unspecified phase)
0.7258 Intermediate Similarity NPD4361 Phase 2
0.7257 Intermediate Similarity NPD7184 Clinical (unspecified phase)
0.7244 Intermediate Similarity NPD6832 Phase 2
0.7233 Intermediate Similarity NPD230 Phase 1
0.7232 Intermediate Similarity NPD7228 Approved
0.7229 Intermediate Similarity NPD7004 Clinical (unspecified phase)
0.7226 Intermediate Similarity NPD2798 Approved
0.7215 Intermediate Similarity NPD6233 Phase 2
0.7211 Intermediate Similarity NPD6823 Phase 2
0.72 Intermediate Similarity NPD7229 Phase 3
0.72 Intermediate Similarity NPD1548 Phase 1
0.7186 Intermediate Similarity NPD5049 Phase 3
0.7174 Intermediate Similarity NPD4287 Approved
0.7161 Intermediate Similarity NPD2797 Approved
0.716 Intermediate Similarity NPD5808 Clinical (unspecified phase)
0.7152 Intermediate Similarity NPD6190 Approved
0.7152 Intermediate Similarity NPD2354 Approved
0.7151 Intermediate Similarity NPD1729 Discontinued
0.7143 Intermediate Similarity NPD7199 Phase 2
0.7143 Intermediate Similarity NPD6980 Clinical (unspecified phase)
0.7126 Intermediate Similarity NPD6234 Discontinued
0.7125 Intermediate Similarity NPD1933 Approved
0.7125 Intermediate Similarity NPD447 Suspended
0.7119 Intermediate Similarity NPD7784 Clinical (unspecified phase)
0.7117 Intermediate Similarity NPD1471 Phase 3
0.7117 Intermediate Similarity NPD2343 Clinical (unspecified phase)
0.7111 Intermediate Similarity NPD3823 Discontinued
0.7099 Intermediate Similarity NPD4308 Phase 3
0.7091 Intermediate Similarity NPD7003 Approved
0.7089 Intermediate Similarity NPD3027 Phase 3
0.7078 Intermediate Similarity NPD9717 Approved
0.7052 Intermediate Similarity NPD4288 Approved
0.7048 Intermediate Similarity NPD3887 Approved
0.7044 Intermediate Similarity NPD6410 Clinical (unspecified phase)
0.7044 Intermediate Similarity NPD3764 Approved
0.7037 Intermediate Similarity NPD7097 Phase 1
0.7035 Intermediate Similarity NPD6844 Discontinued
0.7035 Intermediate Similarity NPD37 Approved
0.7032 Intermediate Similarity NPD4749 Approved
0.703 Intermediate Similarity NPD1652 Phase 2
0.703 Intermediate Similarity NPD2654 Approved
0.7026 Intermediate Similarity NPD7585 Approved
0.7024 Intermediate Similarity NPD7422 Clinical (unspecified phase)
0.7019 Intermediate Similarity NPD1899 Clinical (unspecified phase)
0.7013 Intermediate Similarity NPD422 Phase 1

Structure

External Identifiers

PubChem CID   44233680
ChEMBL   CHEMBL557703
ZINC  

Physicochemical Properties

Molecular Weight:  454.20
ALogP:  -0.1476
MLogP:  3.55
XLogP:  2.95
# Rotatable Bonds:  9
Polar Surface Area:  94.45
# H-Bond Aceptor:  2
# H-Bond Donor:  2
# Rings:  5
# Heavy Atoms:  33

Download Data

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General Info & Identifiers & Properties  
Structure MOL file  
Source Organisms  
Biological Activities  
Similar NPs/Drugs