Structure

Physi-Chem Properties

Molecular Weight:  873.27
Volume:  818.88
LogP:  1.322
LogD:  1.271
LogS:  -3.971
# Rotatable Bonds:  14
TPSA:  286.12
# H-Bond Aceptor:  21
# H-Bond Donor:  2
# Rings:  6
# Heavy Atoms:  21

MedChem Properties

QED Drug-Likeness Score:  0.277
Synthetic Accessibility Score:  7.818
Fsp3:  0.585
Lipinski Rule-of-5:  Rejected
Pfizer Rule:  Accepted
GSK Rule:  Rejected
BMS Rule:  0
Golden Triangle Rule:  Rejected
Chelating Alert:  0
PAINS Alert:  0

ADMET Properties (ADMETlab2.0)

ADMET: Absorption

Caco-2 Permeability:  -5.346
MDCK Permeability:  0.00018678676860872656
Pgp-inhibitor:  0.999
Pgp-substrate:  0.222
Human Intestinal Absorption (HIA):  0.974
20% Bioavailability (F20%):  0.999
30% Bioavailability (F30%):  0.99

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB):  0.042
Plasma Protein Binding (PPB):  38.913482666015625%
Volume Distribution (VD):  1.568
Pgp-substrate:  18.254161834716797%

ADMET: Metabolism

CYP1A2-inhibitor:  0.185
CYP1A2-substrate:  0.016
CYP2C19-inhibitor:  0.044
CYP2C19-substrate:  0.057
CYP2C9-inhibitor:  0.011
CYP2C9-substrate:  0.003
CYP2D6-inhibitor:  0.868
CYP2D6-substrate:  0.013
CYP3A4-inhibitor:  0.933
CYP3A4-substrate:  0.261

ADMET: Excretion

Clearance (CL):  2.078
Half-life (T1/2):  0.55

ADMET: Toxicity

hERG Blockers:  0.11
Human Hepatotoxicity (H-HT):  0.965
Drug-inuced Liver Injury (DILI):  0.979
AMES Toxicity:  0.058
Rat Oral Acute Toxicity:  0.073
Maximum Recommended Daily Dose:  0.015
Skin Sensitization:  0.119
Carcinogencity:  0.045
Eye Corrosion:  0.003
Eye Irritation:  0.021
Respiratory Toxicity:  0.046

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  Natural Product: NPC475315

Natural Product ID:  NPC475315
Common Name*:   Hypoglaunine A
IUPAC Name:   n.a.
Synonyms:  
Standard InCHIKey:  ZWMDSFIGEYLEIP-PEWXIWONSA-N
Standard InCHI:  InChI=1S/C41H47NO20/c1-18-24-12-13-42-15-25(24)34(48)54-16-37(7)27-28(56-19(2)43)32(59-22(5)46)40(17-55-35(49)26-11-10-14-53-26)33(60-23(6)47)29(57-20(3)44)31(61-36(50)38(18,8)51)39(9,52)41(40,62-37)30(27)58-21(4)45/h10-15,18,27-33,51-52H,16-17H2,1-9H3/t18?,27-,28-,29+,30-,31+,32-,33+,37+,38?,39+,40-,41+/m1/s1
SMILES:  CC(=O)O[C@H]1[C@@H]2OC(=O)C(C)(O)C(C)c3ccncc3C(=O)OC[C@@]3(O[C@@]4([C@@]2(C)O)[C@]([C@H]1OC(=O)C)(COC(=O)c1ccco1)[C@H](OC(=O)C)[C@@H]([C@@H]3[C@H]4OC(=O)C)OC(=O)C)C
Synthetic Gene Cluster:   n.a.
ChEMBL Identifier:   CHEMBL503359
PubChem CID:   44583768
Chemical Classification**:  
  • CHEMONTID:0000000 [Organic compounds]
    • [CHEMONTID:0000012] Lipids and lipid-like molecules
      • [CHEMONTID:0000259] Prenol lipids
        • [CHEMONTID:0001283] Terpene lactones

*Note: the InCHIKey will be temporarily assigned as the "Common Name" if no IUPAC name or alternative short name is available.
**Note: the Chemical Classification was calculated by NPClassifier Version 1.5. Reference: PMID:34662515.

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO13661 Tripterygium wilfordii Species Celastraceae Eukaryota n.a. n.a. n.a. DOI[10.1016/0031-9422(90)85349-K]
NPO1152 Tripterygium hypoglaucum Species Celastraceae Eukaryota n.a. root n.a. DOI[10.1016/S0040-4039(99)00339-1]
NPO13661 Tripterygium wilfordii Species Celastraceae Eukaryota n.a. root n.a. DOI[10.1186/1471-2202-6-1]
NPO13661 Tripterygium wilfordii Species Celastraceae Eukaryota n.a. n.a. n.a. PMID[10579865]
NPO13661 Tripterygium wilfordii Species Celastraceae Eukaryota n.a. leaf n.a. PMID[10716597]
NPO1152 Tripterygium hypoglaucum Species Celastraceae Eukaryota n.a. root n.a. PMID[10746886]
NPO13661 Tripterygium wilfordii Species Celastraceae Eukaryota n.a. n.a. n.a. PMID[10757718]
NPO1152 Tripterygium hypoglaucum Species Celastraceae Eukaryota root bark Kunming, Yunnan, China n.a. PMID[10757718]
NPO1152 Tripterygium hypoglaucum Species Celastraceae Eukaryota n.a. root n.a. PMID[10757718]
NPO1152 Tripterygium hypoglaucum Species Celastraceae Eukaryota n.a. n.a. n.a. PMID[10757718]
NPO13661 Tripterygium wilfordii Species Celastraceae Eukaryota n.a. n.a. n.a. PMID[11374948]
NPO13661 Tripterygium wilfordii Species Celastraceae Eukaryota n.a. n.a. n.a. PMID[11561442]
NPO13661 Tripterygium wilfordii Species Celastraceae Eukaryota n.a. n.a. n.a. PMID[12579877]
NPO13661 Tripterygium wilfordii Species Celastraceae Eukaryota n.a. n.a. n.a. PMID[1375626]
NPO13661 Tripterygium wilfordii Species Celastraceae Eukaryota n.a. root n.a. PMID[1375626]
NPO13661 Tripterygium wilfordii Species Celastraceae Eukaryota n.a. n.a. n.a. PMID[1602302]
NPO13661 Tripterygium wilfordii Species Celastraceae Eukaryota n.a. root n.a. PMID[1602302]
NPO13661 Tripterygium wilfordii Species Celastraceae Eukaryota n.a. root n.a. PMID[16864458]
NPO13661 Tripterygium wilfordii Species Celastraceae Eukaryota roots n.a. n.a. PMID[16989518]
NPO13661 Tripterygium wilfordii Species Celastraceae Eukaryota n.a. root n.a. PMID[17250858]
NPO13661 Tripterygium wilfordii Species Celastraceae Eukaryota n.a. n.a. n.a. PMID[17265278]
NPO13661 Tripterygium wilfordii Species Celastraceae Eukaryota n.a. root n.a. PMID[1823717]
NPO13661 Tripterygium wilfordii Species Celastraceae Eukaryota n.a. leaf n.a. PMID[1823717]
NPO13661 Tripterygium wilfordii Species Celastraceae Eukaryota n.a. n.a. n.a. PMID[18554602]
NPO13661 Tripterygium wilfordii Species Celastraceae Eukaryota n.a. bark n.a. PMID[18996177]
NPO13661 Tripterygium wilfordii Species Celastraceae Eukaryota root n.a. n.a. PMID[21486005]
NPO13661 Tripterygium wilfordii Species Celastraceae Eukaryota n.a. root n.a. PMID[21486005]
NPO13661 Tripterygium wilfordii Species Celastraceae Eukaryota n.a. n.a. n.a. PMID[21514608]
NPO13661 Tripterygium wilfordii Species Celastraceae Eukaryota dried roots purchased from Sichuan Neautus Traditional Chinese Medicine Co. Ltd. (Chengdu, P.R. China) n.a. PMID[22148431]
NPO1152 Tripterygium hypoglaucum Species Celastraceae Eukaryota n.a. root n.a. PMID[22256754]
NPO1152 Tripterygium hypoglaucum Species Celastraceae Eukaryota n.a. n.a. n.a. PMID[22256754]
NPO1152 Tripterygium hypoglaucum Species Celastraceae Eukaryota n.a. root n.a. PMID[23252270]
NPO13661 Tripterygium wilfordii Species Celastraceae Eukaryota leaves n.a. n.a. PMID[23268606]
NPO13661 Tripterygium wilfordii Species Celastraceae Eukaryota n.a. n.a. n.a. PMID[23852638]
NPO13661 Tripterygium wilfordii Species Celastraceae Eukaryota n.a. n.a. n.a. PMID[24549173]
NPO13661 Tripterygium wilfordii Species Celastraceae Eukaryota n.a. n.a. n.a. PMID[24963543]
NPO13661 Tripterygium wilfordii Species Celastraceae Eukaryota n.a. n.a. n.a. PMID[25237706]
NPO13661 Tripterygium wilfordii Species Celastraceae Eukaryota n.a. bark n.a. PMID[2534610]
NPO1152 Tripterygium hypoglaucum Species Celastraceae Eukaryota n.a. n.a. n.a. PMID[2534610]
NPO13661 Tripterygium wilfordii Species Celastraceae Eukaryota n.a. root n.a. PMID[2816380]
NPO13661 Tripterygium wilfordii Species Celastraceae Eukaryota Leaves n.a. n.a. PMID[29355322]
NPO13661 Tripterygium wilfordii Species Celastraceae Eukaryota Leaves n.a. n.a. PMID[31556299]
NPO1152 Tripterygium hypoglaucum Species Celastraceae Eukaryota n.a. n.a. n.a. Europe PMC[535601]
NPO13661 Tripterygium wilfordii Species Celastraceae Eukaryota n.a. n.a. n.a. PMID[7102323]
NPO13661 Tripterygium wilfordii Species Celastraceae Eukaryota n.a. n.a. n.a. PMID[7304185]
NPO1152 Tripterygium hypoglaucum Species Celastraceae Eukaryota n.a. n.a. n.a. PMID[8328267]
NPO13661 Tripterygium wilfordii Species Celastraceae Eukaryota n.a. n.a. n.a. PMID[8699928]
NPO13661 Tripterygium wilfordii Species Celastraceae Eukaryota n.a. n.a. n.a. PMID[8722541]
NPO1152 Tripterygium hypoglaucum Species Celastraceae Eukaryota n.a. n.a. n.a. Database[Article]
NPO1152 Tripterygium hypoglaucum Species Celastraceae Eukaryota n.a. root n.a. Database[Article]
NPO13661 Tripterygium wilfordii Species Celastraceae Eukaryota n.a. n.a. n.a. Database[Article]
NPO13661 Tripterygium wilfordii Species Celastraceae Eukaryota n.a. root n.a. Database[Article]
NPO1152 Tripterygium hypoglaucum Species Celastraceae Eukaryota n.a. leaf n.a. Database[Article]
NPO1152 Tripterygium hypoglaucum Species Celastraceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO13661 Tripterygium wilfordii Species Celastraceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO1152 Tripterygium hypoglaucum Species Celastraceae Eukaryota n.a. n.a. n.a. PMID[Phytochemistry, 2000, 53, 715-722.]
NPO1152 Tripterygium hypoglaucum Species Celastraceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO13661 Tripterygium wilfordii Species Celastraceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO1152 Tripterygium hypoglaucum Species Celastraceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO1152 Tripterygium hypoglaucum Species Celastraceae Eukaryota n.a. n.a. n.a. Database[Title]
NPO1152 Tripterygium hypoglaucum Species Celastraceae Eukaryota root bark n.a. n.a. Database[Title]
NPO1152 Tripterygium hypoglaucum Species Celastraceae Eukaryota root bark Kunming, Yunnan, China n.a. Database[Title]
NPO1152 Tripterygium hypoglaucum Species Celastraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO13661 Tripterygium wilfordii Species Celastraceae Eukaryota n.a. n.a. n.a. Database[UNPD]

☑ Note for Reference:
In addition to directly collecting NP source organism data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated them from below databases:
UNPD: Universal Natural Products Database [PMID: 23638153].
StreptomeDB: a database of streptomycetes natural products [PMID: 33051671].
TM-MC: a database of medicinal materials and chemical compounds in Northeast Asian traditional medicine [PMID: 26156871].
TCM@Taiwan: a Traditional Chinese Medicine database [PMID: 21253603].
TCMID: a Traditional Chinese Medicine database [PMID: 29106634].
TCMSP: The traditional Chinese medicine systems pharmacology database and analysis platform [PMID: 24735618].
HerDing: a herb recommendation system to treat diseases using genes and chemicals [PMID: 26980517].
MetaboLights: a metabolomics database [PMID: 27010336].
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  NP Quantity Composition/Concentration

Organism ID NP ID Organism Material Preparation Organism Part NP Quantity (Standard) NP Quantity (Minimum) NP Quantity (Maximum) Quantity Unit Reference

☑ Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP quantitative records for specific NP domains (e.g., NPS from foods or herbs) from domain-specific databases. These databases include:
DUKE: Dr. Duke's Phytochemical and Ethnobotanical Databases.
PHENOL EXPLORER: is the first comprehensive database on polyphenol content in foods [PMID: 24103452], its homepage can be accessed at here.
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT759 Cell Line H9 Homo sapiens IC50 > 100.0 ug.mL-1 PMID[505324]
NPT759 Cell Line H9 Homo sapiens IC50 > 100.0 ug.mL-1 PMID[505325]
NPT179 Cell Line A2780 Homo sapiens IC50 > 1000.0 nM PMID[505326]
NPT180 Cell Line HCT-8 Homo sapiens IC50 > 1000.0 nM PMID[505326]
NPT547 Cell Line BGC-823 Homo sapiens IC50 > 1000.0 nM PMID[505326]
NPT181 Cell Line Bel-7402 Homo sapiens IC50 > 1000.0 nM PMID[505326]
NPT81 Cell Line A549 Homo sapiens IC50 > 1000.0 nM PMID[505326]
NPT24 Organism Human immunodeficiency virus 1 Human immunodeficiency virus 1 EC50 = 0.13 ug.mL-1 PMID[505324]
NPT27 Others Unspecified Ratio IC50/EC50 > 769.0 n.a. PMID[505324]
NPT24 Organism Human immunodeficiency virus 1 Human immunodeficiency virus 1 EC50 = 0.13 ug.mL-1 PMID[505325]
NPT27 Others Unspecified Ratio IC50/EC50 > 769.0 n.a. PMID[505325]

☑ Note for Activity Records:
☉ The quantitative biological activities were primarily integrated from ChEMBL (Version-30) database and were also directly collected from PubMed literature. PubMed PMID was provided as the reference link for each activity record.

  Chemically structural similarity: I. Similar Active Natural Products in NPASS

Top-200 similar NPs were calculated against the active-NP-set (includes 4,3285 NPs with experimentally-derived bioactivity available in NPASS)

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC475315 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
1.0 High Similarity NPC324619
0.9954 High Similarity NPC475533
0.9643 High Similarity NPC85879
0.9643 High Similarity NPC326930
0.9643 High Similarity NPC475301
0.9643 High Similarity NPC53255
0.96 High Similarity NPC13603
0.9559 High Similarity NPC473833
0.9511 High Similarity NPC471015
0.9391 High Similarity NPC328928
0.9286 High Similarity NPC180668
0.9286 High Similarity NPC148896
0.9286 High Similarity NPC471013
0.9142 High Similarity NPC471978
0.9123 High Similarity NPC10904
0.9025 High Similarity NPC471979
0.8914 High Similarity NPC475601
0.8909 High Similarity NPC328154
0.8802 High Similarity NPC470306
0.8795 High Similarity NPC96801
0.8795 High Similarity NPC150698
0.8784 High Similarity NPC148860
0.8761 High Similarity NPC475408
0.8761 High Similarity NPC471014
0.8761 High Similarity NPC471016
0.8756 High Similarity NPC469748
0.8688 High Similarity NPC477912
0.8682 High Similarity NPC84815
0.8682 High Similarity NPC301368
0.8678 High Similarity NPC35208
0.8676 High Similarity NPC6981
0.8636 High Similarity NPC144779
0.8636 High Similarity NPC294579
0.8609 High Similarity NPC253482
0.859 High Similarity NPC320324
0.859 High Similarity NPC319880
0.859 High Similarity NPC471004
0.859 High Similarity NPC244839
0.8584 High Similarity NPC228331
0.8584 High Similarity NPC319128
0.8578 High Similarity NPC146824
0.8565 High Similarity NPC477911
0.8565 High Similarity NPC127720
0.8565 High Similarity NPC127026
0.8553 High Similarity NPC237702
0.8552 High Similarity NPC62367
0.8546 High Similarity NPC473689
0.8546 High Similarity NPC292416
0.8545 High Similarity NPC477910
0.854 High Similarity NPC475362
0.8527 High Similarity NPC57797
0.8527 High Similarity NPC250807
0.8527 High Similarity NPC471980
0.8527 High Similarity NPC76565
0.8514 High Similarity NPC216428
0.85 High Similarity NPC4421
0.8498 Intermediate Similarity NPC475648
0.8496 Intermediate Similarity NPC476110
0.8496 Intermediate Similarity NPC475631
0.8496 Intermediate Similarity NPC328186
0.8496 Intermediate Similarity NPC228377
0.8496 Intermediate Similarity NPC122968
0.8496 Intermediate Similarity NPC477787
0.8496 Intermediate Similarity NPC87152
0.8496 Intermediate Similarity NPC124029
0.8496 Intermediate Similarity NPC475600
0.8496 Intermediate Similarity NPC211920
0.8493 Intermediate Similarity NPC472553
0.8489 Intermediate Similarity NPC475137
0.8489 Intermediate Similarity NPC475498
0.8489 Intermediate Similarity NPC473850
0.8478 Intermediate Similarity NPC327904
0.8478 Intermediate Similarity NPC38959
0.8462 Intermediate Similarity NPC42678
0.8462 Intermediate Similarity NPC477907
0.8462 Intermediate Similarity NPC477909
0.8458 Intermediate Similarity NPC471190
0.8458 Intermediate Similarity NPC471977
0.8458 Intermediate Similarity NPC475644
0.8458 Intermediate Similarity NPC470486
0.8435 Intermediate Similarity NPC475406
0.8435 Intermediate Similarity NPC475426
0.843 Intermediate Similarity NPC472555
0.8407 Intermediate Similarity NPC477902
0.8386 Intermediate Similarity NPC473115
0.8386 Intermediate Similarity NPC158020
0.8386 Intermediate Similarity NPC6576
0.8386 Intermediate Similarity NPC473089
0.8386 Intermediate Similarity NPC212768
0.8386 Intermediate Similarity NPC75600
0.8384 Intermediate Similarity NPC316841
0.8384 Intermediate Similarity NPC475596
0.8384 Intermediate Similarity NPC477906
0.8384 Intermediate Similarity NPC475303
0.837 Intermediate Similarity NPC473506
0.8356 Intermediate Similarity NPC472550
0.8356 Intermediate Similarity NPC48042
0.8356 Intermediate Similarity NPC304179
0.8355 Intermediate Similarity NPC327769
0.8348 Intermediate Similarity NPC30456
0.8341 Intermediate Similarity NPC206343
0.8341 Intermediate Similarity NPC477908
0.8319 Intermediate Similarity NPC477788
0.8312 Intermediate Similarity NPC238278
0.8297 Intermediate Similarity NPC134384
0.8297 Intermediate Similarity NPC311196
0.8268 Intermediate Similarity NPC213143
0.8253 Intermediate Similarity NPC285411
0.8253 Intermediate Similarity NPC14116
0.8246 Intermediate Similarity NPC26881
0.8227 Intermediate Similarity NPC63041
0.8197 Intermediate Similarity NPC170751
0.8194 Intermediate Similarity NPC477903
0.817 Intermediate Similarity NPC264674
0.8166 Intermediate Similarity NPC477900
0.8166 Intermediate Similarity NPC233727
0.8166 Intermediate Similarity NPC477899
0.8158 Intermediate Similarity NPC235364
0.8108 Intermediate Similarity NPC472752
0.8103 Intermediate Similarity NPC91125
0.807 Intermediate Similarity NPC477901
0.7928 Intermediate Similarity NPC289086
0.792 Intermediate Similarity NPC476467
0.7904 Intermediate Similarity NPC187494
0.7904 Intermediate Similarity NPC319556
0.7876 Intermediate Similarity NPC40919
0.7876 Intermediate Similarity NPC470189
0.7841 Intermediate Similarity NPC323551
0.7841 Intermediate Similarity NPC280473
0.7822 Intermediate Similarity NPC470190
0.7817 Intermediate Similarity NPC30570
0.7817 Intermediate Similarity NPC207531
0.7807 Intermediate Similarity NPC41724
0.7807 Intermediate Similarity NPC51008
0.7739 Intermediate Similarity NPC193361
0.7739 Intermediate Similarity NPC62844
0.7729 Intermediate Similarity NPC165837
0.7686 Intermediate Similarity NPC292517
0.7673 Intermediate Similarity NPC107123
0.765 Intermediate Similarity NPC253314
0.7629 Intermediate Similarity NPC162812
0.7544 Intermediate Similarity NPC475835
0.7434 Intermediate Similarity NPC470279
0.7419 Intermediate Similarity NPC476090
0.7321 Intermediate Similarity NPC103230
0.7298 Intermediate Similarity NPC119134
0.7273 Intermediate Similarity NPC309498
0.7273 Intermediate Similarity NPC183537
0.7269 Intermediate Similarity NPC324245
0.7269 Intermediate Similarity NPC320748
0.7255 Intermediate Similarity NPC478045
0.7249 Intermediate Similarity NPC155792
0.7249 Intermediate Similarity NPC328559
0.7249 Intermediate Similarity NPC32451
0.7244 Intermediate Similarity NPC289786
0.724 Intermediate Similarity NPC75179
0.724 Intermediate Similarity NPC15406
0.7233 Intermediate Similarity NPC134637
0.7229 Intermediate Similarity NPC210296
0.722 Intermediate Similarity NPC44354
0.7213 Intermediate Similarity NPC24019
0.7211 Intermediate Similarity NPC124313
0.7206 Intermediate Similarity NPC108342
0.7205 Intermediate Similarity NPC79223
0.7205 Intermediate Similarity NPC77878
0.7203 Intermediate Similarity NPC236668
0.7177 Intermediate Similarity NPC182907
0.7177 Intermediate Similarity NPC189903
0.7173 Intermediate Similarity NPC146976
0.7167 Intermediate Similarity NPC54066
0.7166 Intermediate Similarity NPC90875
0.7161 Intermediate Similarity NPC111732
0.7154 Intermediate Similarity NPC233334
0.7149 Intermediate Similarity NPC329024
0.7131 Intermediate Similarity NPC84164
0.7131 Intermediate Similarity NPC207283
0.7105 Intermediate Similarity NPC473053
0.7102 Intermediate Similarity NPC246381
0.7094 Intermediate Similarity NPC193238
0.7094 Intermediate Similarity NPC156044
0.708 Intermediate Similarity NPC166722
0.7066 Intermediate Similarity NPC258048
0.7056 Intermediate Similarity NPC22481
0.7043 Intermediate Similarity NPC317672
0.7043 Intermediate Similarity NPC59033
0.7038 Intermediate Similarity NPC472436
0.7037 Intermediate Similarity NPC210434
0.7024 Intermediate Similarity NPC37473
0.7012 Intermediate Similarity NPC141385
0.7011 Intermediate Similarity NPC191489
0.7009 Intermediate Similarity NPC25442
0.7009 Intermediate Similarity NPC12944
0.7004 Intermediate Similarity NPC278525
0.6987 Remote Similarity NPC146724
0.6973 Remote Similarity NPC129897
0.697 Remote Similarity NPC315634
0.697 Remote Similarity NPC100734
0.697 Remote Similarity NPC88923
0.6957 Remote Similarity NPC109922
0.6943 Remote Similarity NPC470042

  Chemically structural similarity: II. Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC475315 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.7623 Intermediate Similarity NPD1483 Discontinued
0.753 Intermediate Similarity NPD8468 Phase 2
0.7404 Intermediate Similarity NPD4989 Phase 2
0.7382 Intermediate Similarity NPD7069 Discontinued
0.738 Intermediate Similarity NPD2831 Approved
0.7328 Intermediate Similarity NPD7886 Phase 2
0.7328 Intermediate Similarity NPD7885 Phase 2
0.7302 Intermediate Similarity NPD6525 Clinical (unspecified phase)
0.7293 Intermediate Similarity NPD6477 Clinical (unspecified phase)
0.7248 Intermediate Similarity NPD8304 Clinical (unspecified phase)
0.7185 Intermediate Similarity NPD8404 Phase 2
0.7184 Intermediate Similarity NPD6962 Phase 2
0.7155 Intermediate Similarity NPD7396 Approved
0.7126 Intermediate Similarity NPD4373 Phase 2
0.7093 Intermediate Similarity NPD6361 Phase 2
0.7076 Intermediate Similarity NPD6262 Clinical (unspecified phase)
0.7073 Intermediate Similarity NPD5801 Clinical (unspecified phase)
0.705 Intermediate Similarity NPD7862 Clinical (unspecified phase)
0.7042 Intermediate Similarity NPD3326 Clinical (unspecified phase)
0.7022 Intermediate Similarity NPD6257 Clinical (unspecified phase)
0.7012 Intermediate Similarity NPD6825 Phase 1
0.7011 Intermediate Similarity NPD7708 Approved
0.7004 Intermediate Similarity NPD4952 Phase 3
0.698 Remote Similarity NPD3925 Approved
0.697 Remote Similarity NPD7803 Approved
0.6955 Remote Similarity NPD8479 Phase 2
0.6951 Remote Similarity NPD5640 Discontinued
0.6946 Remote Similarity NPD5866 Approved
0.6942 Remote Similarity NPD1926 Approved
0.6935 Remote Similarity NPD8052 Clinical (unspecified phase)
0.6933 Remote Similarity NPD4889 Approved
0.6932 Remote Similarity NPD3006 Discontinued
0.6913 Remote Similarity NPD5975 Clinical (unspecified phase)
0.691 Remote Similarity NPD4396 Clinical (unspecified phase)
0.6904 Remote Similarity NPD7927 Clinical (unspecified phase)
0.6892 Remote Similarity NPD7807 Clinical (unspecified phase)
0.6882 Remote Similarity NPD6530 Approved
0.6882 Remote Similarity NPD6531 Approved
0.6875 Remote Similarity NPD7967 Discontinued
0.6867 Remote Similarity NPD5022 Discontinued
0.6863 Remote Similarity NPD3217 Phase 2
0.6857 Remote Similarity NPD4923 Phase 1
0.6857 Remote Similarity NPD6298 Discontinued
0.6834 Remote Similarity NPD5482 Discontinued
0.6824 Remote Similarity NPD7417 Discontinued
0.6818 Remote Similarity NPD4667 Clinical (unspecified phase)
0.6816 Remote Similarity NPD5751 Clinical (unspecified phase)
0.6795 Remote Similarity NPD8350 Clinical (unspecified phase)
0.6793 Remote Similarity NPD3946 Clinical (unspecified phase)
0.678 Remote Similarity NPD7955 Approved
0.678 Remote Similarity NPD7956 Approved
0.6777 Remote Similarity NPD3794 Approved
0.6777 Remote Similarity NPD3795 Approved
0.6776 Remote Similarity NPD6955 Clinical (unspecified phase)
0.6766 Remote Similarity NPD5228 Phase 3
0.6758 Remote Similarity NPD6790 Phase 1
0.6744 Remote Similarity NPD5483 Clinical (unspecified phase)
0.6742 Remote Similarity NPD8091 Phase 3
0.674 Remote Similarity NPD8465 Approved
0.674 Remote Similarity NPD8467 Approved
0.674 Remote Similarity NPD8466 Approved
0.6735 Remote Similarity NPD7395 Discontinued
0.6732 Remote Similarity NPD6716 Phase 1
0.6732 Remote Similarity NPD5891 Approved
0.6725 Remote Similarity NPD8434 Phase 2
0.6724 Remote Similarity NPD4551 Phase 2
0.672 Remote Similarity NPD6553 Clinical (unspecified phase)
0.6716 Remote Similarity NPD5922 Phase 3
0.6708 Remote Similarity NPD7571 Clinical (unspecified phase)
0.6708 Remote Similarity NPD7467 Discontinued
0.6703 Remote Similarity NPD8460 Approved
0.6703 Remote Similarity NPD8459 Approved
0.6695 Remote Similarity NPD6219 Discontinued
0.6691 Remote Similarity NPD7053 Clinical (unspecified phase)
0.6682 Remote Similarity NPD820 Phase 3
0.6681 Remote Similarity NPD3923 Approved
0.6681 Remote Similarity NPD3922 Approved
0.6681 Remote Similarity NPD3924 Approved
0.6681 Remote Similarity NPD4375 Approved
0.6681 Remote Similarity NPD3921 Approved
0.6654 Remote Similarity NPD2921 Clinical (unspecified phase)
0.6653 Remote Similarity NPD5147 Discontinued
0.6653 Remote Similarity NPD6874 Approved
0.6653 Remote Similarity NPD7268 Clinical (unspecified phase)
0.6653 Remote Similarity NPD5726 Clinical (unspecified phase)
0.6652 Remote Similarity NPD7414 Clinical (unspecified phase)
0.6643 Remote Similarity NPD8425 Approved
0.6643 Remote Similarity NPD8426 Approved
0.6641 Remote Similarity NPD8101 Phase 3
0.6641 Remote Similarity NPD5805 Approved
0.6636 Remote Similarity NPD5088 Discontinued
0.6628 Remote Similarity NPD6276 Discontinued
0.6626 Remote Similarity NPD8327 Clinical (unspecified phase)
0.6626 Remote Similarity NPD7703 Clinical (unspecified phase)
0.6626 Remote Similarity NPD8325 Phase 3
0.6626 Remote Similarity NPD8326 Phase 3
0.6623 Remote Similarity NPD4021 Phase 2
0.6618 Remote Similarity NPD8427 Approved
0.6618 Remote Similarity NPD8428 Approved
0.6618 Remote Similarity NPD8429 Approved
0.6614 Remote Similarity NPD7426 Phase 1
0.6612 Remote Similarity NPD6529 Discontinued
0.6609 Remote Similarity NPD6569 Phase 2
0.6605 Remote Similarity NPD7393 Clinical (unspecified phase)
0.6603 Remote Similarity NPD4369 Phase 2
0.6602 Remote Similarity NPD7853 Phase 2
0.6601 Remote Similarity NPD7589 Clinical (unspecified phase)
0.6598 Remote Similarity NPD5429 Discontinued
0.6596 Remote Similarity NPD5512 Phase 3
0.6593 Remote Similarity NPD5450 Discontinued
0.6588 Remote Similarity NPD6741 Clinical (unspecified phase)
0.6588 Remote Similarity NPD6494 Phase 2
0.6588 Remote Similarity NPD7558 Phase 2
0.6581 Remote Similarity NPD8363 Approved
0.6581 Remote Similarity NPD8364 Approved
0.6579 Remote Similarity NPD3386 Phase 2
0.657 Remote Similarity NPD2510 Approved
0.657 Remote Similarity NPD2509 Approved
0.6569 Remote Similarity NPD5721 Clinical (unspecified phase)
0.6568 Remote Similarity NPD8485 Approved
0.6564 Remote Similarity NPD1620 Clinical (unspecified phase)
0.6555 Remote Similarity NPD4491 Clinical (unspecified phase)
0.6554 Remote Similarity NPD8461 Discontinued
0.6554 Remote Similarity NPD7169 Suspended
0.6547 Remote Similarity NPD6872 Clinical (unspecified phase)
0.6546 Remote Similarity NPD7180 Phase 3
0.6545 Remote Similarity NPD5417 Clinical (unspecified phase)
0.6545 Remote Similarity NPD7707 Approved
0.6538 Remote Similarity NPD7022 Phase 2
0.6538 Remote Similarity NPD3322 Phase 1
0.6534 Remote Similarity NPD7547 Clinical (unspecified phase)
0.6533 Remote Similarity NPD8365 Clinical (unspecified phase)
0.6532 Remote Similarity NPD3354 Phase 2
0.6532 Remote Similarity NPD4429 Discontinued
0.6531 Remote Similarity NPD3816 Phase 1
0.6531 Remote Similarity NPD8279 Clinical (unspecified phase)
0.6531 Remote Similarity NPD3815 Phase 1
0.6527 Remote Similarity NPD8100 Phase 3
0.6522 Remote Similarity NPD3259 Approved
0.6522 Remote Similarity NPD4328 Approved
0.652 Remote Similarity NPD7907 Approved
0.6515 Remote Similarity NPD6987 Phase 1
0.6515 Remote Similarity NPD3947 Discontinued
0.6506 Remote Similarity NPD5867 Clinical (unspecified phase)
0.6506 Remote Similarity NPD6974 Phase 3
0.6506 Remote Similarity NPD6228 Discontinued
0.65 Remote Similarity NPD7123 Suspended
0.6498 Remote Similarity NPD7238 Clinical (unspecified phase)
0.6491 Remote Similarity NPD6503 Clinical (unspecified phase)
0.649 Remote Similarity NPD5416 Discontinued
0.649 Remote Similarity NPD4417 Approved
0.6489 Remote Similarity NPD485 Clinical (unspecified phase)
0.6488 Remote Similarity NPD7010 Phase 3
0.6487 Remote Similarity NPD7416 Clinical (unspecified phase)
0.6486 Remote Similarity NPD6635 Approved
0.6485 Remote Similarity NPD8486 Clinical (unspecified phase)
0.6484 Remote Similarity NPD7924 Phase 2
0.6484 Remote Similarity NPD7925 Phase 2
0.6483 Remote Similarity NPD3395 Approved
0.6483 Remote Similarity NPD3396 Approved
0.648 Remote Similarity NPD6242 Discontinued
0.648 Remote Similarity NPD3280 Approved
0.6475 Remote Similarity NPD4506 Discontinued
0.6475 Remote Similarity NPD4437 Phase 3
0.6473 Remote Similarity NPD7497 Discontinued
0.6473 Remote Similarity NPD5513 Phase 2
0.6471 Remote Similarity NPD1659 Phase 1
0.6466 Remote Similarity NPD2011 Clinical (unspecified phase)
0.6466 Remote Similarity NPD5857 Phase 3
0.6466 Remote Similarity NPD5632 Approved
0.6464 Remote Similarity NPD6460 Clinical (unspecified phase)
0.6457 Remote Similarity NPD7994 Phase 2
0.6453 Remote Similarity NPD4081 Clinical (unspecified phase)
0.6453 Remote Similarity NPD8435 Approved
0.6452 Remote Similarity NPD3393 Approved
0.6452 Remote Similarity NPD2433 Clinical (unspecified phase)
0.6452 Remote Similarity NPD3394 Approved
0.6452 Remote Similarity NPD3389 Approved
0.645 Remote Similarity NPD6495 Clinical (unspecified phase)
0.6449 Remote Similarity NPD5914 Approved
0.6447 Remote Similarity NPD1032 Phase 2
0.6442 Remote Similarity NPD4926 Clinical (unspecified phase)
0.6442 Remote Similarity NPD8370 Discontinued
0.6442 Remote Similarity NPD8463 Approved
0.644 Remote Similarity NPD6770 Approved
0.6434 Remote Similarity NPD6964 Approved
0.6434 Remote Similarity NPD6963 Approved
0.6429 Remote Similarity NPD8356 Approved
0.642 Remote Similarity NPD7797 Approved
0.642 Remote Similarity NPD7796 Approved
0.642 Remote Similarity NPD5015 Clinical (unspecified phase)
0.642 Remote Similarity NPD7031 Phase 1
0.6418 Remote Similarity NPD8442 Discontinued
0.6417 Remote Similarity NPD4107 Approved
0.6417 Remote Similarity NPD3263 Phase 3
0.6416 Remote Similarity NPD1078 Clinical (unspecified phase)
0.6415 Remote Similarity NPD8102 Discontinued
0.6412 Remote Similarity NPD6517 Phase 3
0.6411 Remote Similarity NPD7538 Clinical (unspecified phase)
0.6406 Remote Similarity NPD5479 Discontinued

  Bioactivity similarity: Similar Natural Products in NPASS

Bioactivity similarity was calculated based on bioactivity descriptors of compounds. The bioactivity descriptors were calculated by a recently developed AI algorithm Chemical Checker (CC) [Nature Biotechnology, 38:1087–1096, 2020; Nature Communications, 12:3932, 2021], which evaluated bioactivity similarities at five levels:
A: chemistry similarity;
B: biological targets similarity;
C: networks similarity;
D: cell-based bioactivity similarity;
E: similarity based on clinical data.

Those 5 categories of CC bioactivity descriptors were calculated and then subjected to manifold projection using UMAP algorithm, to project all NPs on a 2-Dimensional space. The current NP was highlighted with a small circle in the 2-D map. Below figures: left-to-right, A-to-E.

A: chemistry similarity
B: biological targets similarity
C: networks similarity
D: cell-based bioactivity similarity
E: similarity based on clinical data