Structure

Physi-Chem Properties

Molecular Weight:  445.2
Volume:  445.416
LogP:  4.21
LogD:  4.113
LogS:  -4.613
# Rotatable Bonds:  0
TPSA:  91.5
# H-Bond Aceptor:  7
# H-Bond Donor:  2
# Rings:  8
# Heavy Atoms:  7

MedChem Properties

QED Drug-Likeness Score:  0.61
Synthetic Accessibility Score:  6.188
Fsp3:  0.5
Lipinski Rule-of-5:  Accepted
Pfizer Rule:  Accepted
GSK Rule:  Rejected
BMS Rule:  0
Golden Triangle Rule:  Accepted
Chelating Alert:  0
PAINS Alert:  0

ADMET Properties (ADMETlab2.0)

ADMET: Absorption

Caco-2 Permeability:  -5.01
MDCK Permeability:  1.9799826986854896e-05
Pgp-inhibitor:  0.993
Pgp-substrate:  0.0
Human Intestinal Absorption (HIA):  0.377
20% Bioavailability (F20%):  0.494
30% Bioavailability (F30%):  0.951

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB):  0.254
Plasma Protein Binding (PPB):  91.39913177490234%
Volume Distribution (VD):  1.036
Pgp-substrate:  3.7706315517425537%

ADMET: Metabolism

CYP1A2-inhibitor:  0.198
CYP1A2-substrate:  0.748
CYP2C19-inhibitor:  0.85
CYP2C19-substrate:  0.848
CYP2C9-inhibitor:  0.923
CYP2C9-substrate:  0.649
CYP2D6-inhibitor:  0.787
CYP2D6-substrate:  0.139
CYP3A4-inhibitor:  0.961
CYP3A4-substrate:  0.932

ADMET: Excretion

Clearance (CL):  3.85
Half-life (T1/2):  0.126

ADMET: Toxicity

hERG Blockers:  0.019
Human Hepatotoxicity (H-HT):  0.967
Drug-inuced Liver Injury (DILI):  0.967
AMES Toxicity:  0.081
Rat Oral Acute Toxicity:  0.979
Maximum Recommended Daily Dose:  0.954
Skin Sensitization:  0.67
Carcinogencity:  0.939
Eye Corrosion:  0.003
Eye Irritation:  0.007
Respiratory Toxicity:  0.942

Download Data

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General Info & Identifiers & Properties  
Structure MOL file  
Source Organisms  
Biological Activities  
Similar NPs/Drugs  

  Natural Product: NPC244543

Natural Product ID:  NPC244543
Common Name*:   Notoamide I
IUPAC Name:   n.a.
Synonyms:   Notoamide I
Standard InCHIKey:  CDJZXTFDGOKTOT-MEMLUFBQSA-N
Standard InCHI:  InChI=1S/C26H27N3O4/c1-23(2)10-8-13-15(33-23)7-6-14-17-19(27-18(13)14)24(3,4)16-12-25-9-5-11-29(25)22(32)26(16,20(17)30)28-21(25)31/h6-8,10,16,27H,5,9,11-12H2,1-4H3,(H,28,31)/t16-,25-,26+/m0/s1
SMILES:  O=C1N2CCC[C@]32C[C@@H]2[C@@]1(N=C3O)C(=O)c1c3ccc4c(c3[nH]c1C2(C)C)C=CC(O4)(C)C
Synthetic Gene Cluster:   n.a.
ChEMBL Identifier:   CHEMBL518633
PubChem CID:   25180708
Chemical Classification**:  
  • CHEMONTID:0000000 [Organic compounds]
    • [CHEMONTID:0000002] Organoheterocyclic compounds
      • [CHEMONTID:0001253] Quinolines and derivatives
        • [CHEMONTID:0001734] Pyrroloquinolines

*Note: the InCHIKey will be temporarily assigned as the "Common Name" if no IUPAC name or alternative short name is available.
**Note: the Chemical Classification was calculated by NPClassifier Version 1.5. Reference: PMID:34662515.

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO21005 Baphia nitida Species Fabaceae Eukaryota n.a. n.a. n.a. DOI[10.1016/0031-9422(92)80059-N]
NPO20931 Simaba multiflora Species Simaroubaceae Eukaryota n.a. xylem n.a. DOI[10.1016/S0040-4039(00)86970-1]
NPO4343 Guanomyces polythrix Species n.a. Eukaryota n.a. n.a. n.a. PMID[10869195]
NPO31572 Aspergillus sp. Species Aspergillaceae Eukaryota rhizosphere Sonoran desert n.a. PMID[15620238]
NPO17256 Kobresia nepalensis Species Cyperaceae Eukaryota n.a. stem n.a. PMID[16508191]
NPO20931 Simaba multiflora Species Simaroubaceae Eukaryota n.a. n.a. n.a. PMID[17340534]
NPO31572 Aspergillus sp. Species Aspergillaceae Eukaryota n.a. n.a. n.a. PMID[17542490]
NPO31572 Aspergillus sp. Species Aspergillaceae Eukaryota n.a. n.a. n.a. PMID[17564467]
NPO31572 Aspergillus sp. Species Aspergillaceae Eukaryota n.a. n.a. n.a. PMID[19053517]
NPO31572 Aspergillus sp. Species Aspergillaceae Eukaryota n.a. n.a. n.a. PMID[21366228]
NPO19192 Sinocalamus affinis Species n.a. n.a. skin-removed stems Pingle Town, Sichuang Province, China 2008-AUG PMID[21469695]
NPO19192 Sinocalamus affinis Species n.a. n.a. n.a. stem n.a. PMID[21469695]
NPO31572 Aspergillus sp. Species Aspergillaceae Eukaryota n.a. n.a. n.a. PMID[21718031]
NPO31572 Aspergillus sp. Species Aspergillaceae Eukaryota n.a. n.a. n.a. PMID[21854017]
NPO31572 Aspergillus sp. Species Aspergillaceae Eukaryota healthy leaf of Ginkgo biloba campus of Nanjing University, Nanjing, China 2008-OCT PMID[22196792]
NPO31572 Aspergillus sp. Species Aspergillaceae Eukaryota isolated from the sponge Xestospongia testudinaria n.a. n.a. PMID[22225637]
NPO31572 Aspergillus sp. Species Aspergillaceae Eukaryota Isolated from a sandy-loam soil sample 50 m inland from Waikiki Beach, Honolulu, Hawaii 2010-JUL PMID[22400916]
NPO19192 Sinocalamus affinis Species n.a. n.a. n.a. n.a. n.a. PMID[22690646]
NPO31572 Aspergillus sp. Species Aspergillaceae Eukaryota n.a. n.a. n.a. PMID[22703109]
NPO19901 Emilia sonchifolia Species Asteraceae Eukaryota n.a. aerial part n.a. PMID[23397723]
NPO31572 Aspergillus sp. Species Aspergillaceae Eukaryota n.a. n.a. n.a. PMID[23527875]
NPO31572 Aspergillus sp. Species Aspergillaceae Eukaryota n.a. n.a. n.a. PMID[24050204]
NPO31572 Aspergillus sp. Species Aspergillaceae Eukaryota n.a. n.a. n.a. PMID[25001296]
NPO31572 Aspergillus sp. Species Aspergillaceae Eukaryota n.a. n.a. n.a. PMID[25581396]
NPO20739 Jungermannia hyalina Species Jungermanniaceae Eukaryota n.a. Guangxi Zhuang Autonomous Region, China n.a. PMID[25856683]
NPO31572 Aspergillus sp. Species Aspergillaceae Eukaryota n.a. n.a. n.a. PMID[26273902]
NPO21618 Ircinia oros Species Irciniidae Eukaryota n.a. n.a. n.a. PMID[28840725]
NPO31572 Aspergillus sp. Species Aspergillaceae Eukaryota n.a. n.a. n.a. PMID[31012585]
NPO21679 Nuphar lutea Species Nymphaeaceae Eukaryota n.a. n.a. n.a. PMID[31182315]
NPO20212 Callistemon viminalis Species Myrtaceae Eukaryota n.a. n.a. n.a. PMID[31276403]
NPO31572 Aspergillus sp. Species Aspergillaceae Eukaryota n.a. n.a. n.a. PMID[33305943]
NPO20931 Simaba multiflora Species Simaroubaceae Eukaryota Fruits n.a. n.a. PMID[3760884]
NPO20931 Simaba multiflora Species Simaroubaceae Eukaryota n.a. n.a. n.a. PMID[6736970]
NPO20931 Simaba multiflora Species Simaroubaceae Eukaryota n.a. n.a. n.a. PMID[6875576]
NPO20931 Simaba multiflora Species Simaroubaceae Eukaryota n.a. n.a. n.a. PMID[6875577]
NPO20931 Simaba multiflora Species Simaroubaceae Eukaryota n.a. xylem n.a. PMID[6875577]
NPO20671 Selliguea feei Species Polypodiaceae Eukaryota Rhizomes n.a. n.a. PMID[8254348]
NPO21679 Nuphar lutea Species Nymphaeaceae Eukaryota n.a. n.a. Database[FooDB]
NPO19488 Trifolium subterraneum Species Fabaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO19017 Prangos pabularia Species Apiaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO19901 Emilia sonchifolia Species Asteraceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO8650.1 Perilla frutescens var. arguta Varieties Lamiaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO17256 Kobresia nepalensis Species Cyperaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO21679 Nuphar lutea Species Nymphaeaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO8650.1 Perilla frutescens var. arguta Varieties Lamiaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO19488 Trifolium subterraneum Species Fabaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO19901 Emilia sonchifolia Species Asteraceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO19017 Prangos pabularia Species Apiaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO11966 Euphorbia kamerunica Species Euphorbiaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO8678 Trillium camschatcense Species Melanthiaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO19017 Prangos pabularia Species Apiaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO19901 Emilia sonchifolia Species Asteraceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO16044 Cupressus lawsoniana Species Cupressaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20408 Ajuga spectabilis Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20612 Ursinia abrotanifolia Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO14330 Agave aurea Species Asparagaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO11966 Euphorbia kamerunica Species Euphorbiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19488 Trifolium subterraneum Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19773 Xenorhabdus bovienii Species Morganellaceae Bacteria n.a. n.a. n.a. Database[UNPD]
NPO13260 Eria foetida Species Orchidaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO21550 Achillea macrophylla Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO21005 Baphia nitida Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20340 Pausinystalia mayumbensis Species Rubiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO8678 Trillium camschatcense Species Melanthiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20739 Jungermannia hyalina Species Jungermanniaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO21426 Alstroemeria revoluta Species Alstroemeriaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO14466 Penicillium olsonii Species Aspergillaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20872 Melampodium heterophyllum Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO17256 Kobresia nepalensis Species Cyperaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO21231 Astragalus tragacantha Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18096 Excoecaria oppositifolia Species Euphorbiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO21486 Marrubium alysson Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20546 Cissus pallidiflorus Species Vitaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO22510 Eupatorium havanense Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26840 Litsea aciculata Species Lauraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19622 Euphorbia marginata Species Euphorbiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO21289 Teucrium oxylepis Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19901 Emilia sonchifolia Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20931 Simaba multiflora Species Simaroubaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO8650.1 Perilla frutescens var. arguta Varieties Lamiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO21088 Litsea pulchella Species Lauraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19192 Sinocalamus affinis Species n.a. n.a. n.a. n.a. n.a. Database[UNPD]
NPO20671 Selliguea feei Species Polypodiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20051 Gardenia collinsae Species Rubiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20813 Myrmica sabuleti Species Formicidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO2854 Gymnosporia senegalensis Species Celastraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO21365 Ligularia muliensis Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO21679 Nuphar lutea Species Nymphaeaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO17515 Pronephrium triphyllum Species Thelypteridaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO3777 Stevia chamaedrys Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20212 Callistemon viminalis Species Myrtaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO11622.1 Shuteria involucrata var. vestita Varieties Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19986 Crataegus davisii Species Rosaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO16907 Pentzia incana Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19017 Prangos pabularia Species Apiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO21618 Ircinia oros Species Irciniidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO14136 Acherontia atropus Species Sphingidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO3237 Mytilus edulis Species Mytilidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO4343 Guanomyces polythrix Species n.a. Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO16454 Crinum erubescens Species Amaryllidaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18620 Grindelia acutifolia Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO15216 Encephalartos altensteinii Species Zamiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]

☑ Note for Reference:
In addition to directly collecting NP source organism data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated them from below databases:
UNPD: Universal Natural Products Database [PMID: 23638153].
StreptomeDB: a database of streptomycetes natural products [PMID: 33051671].
TM-MC: a database of medicinal materials and chemical compounds in Northeast Asian traditional medicine [PMID: 26156871].
TCM@Taiwan: a Traditional Chinese Medicine database [PMID: 21253603].
TCMID: a Traditional Chinese Medicine database [PMID: 29106634].
TCMSP: The traditional Chinese medicine systems pharmacology database and analysis platform [PMID: 24735618].
HerDing: a herb recommendation system to treat diseases using genes and chemicals [PMID: 26980517].
MetaboLights: a metabolomics database [PMID: 27010336].
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  NP Quantity Composition/Concentration

Organism ID NP ID Organism Material Preparation Organism Part NP Quantity (Standard) NP Quantity (Minimum) NP Quantity (Maximum) Quantity Unit Reference

☑ Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP quantitative records for specific NP domains (e.g., NPS from foods or herbs) from domain-specific databases. These databases include:
DUKE: Dr. Duke's Phytochemical and Ethnobotanical Databases.
PHENOL EXPLORER: is the first comprehensive database on polyphenol content in foods [PMID: 24103452], its homepage can be accessed at here.
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT165 Cell Line HeLa Homo sapiens IC50 = 21.0 ug.mL-1 PMID[496687]

☑ Note for Activity Records:
☉ The quantitative biological activities were primarily integrated from ChEMBL (Version-30) database and were also directly collected from PubMed literature. PubMed PMID was provided as the reference link for each activity record.

  Chemically structural similarity: I. Similar Active Natural Products in NPASS

Top-200 similar NPs were calculated against the active-NP-set (includes 4,3285 NPs with experimentally-derived bioactivity available in NPASS)

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC244543 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
0.9286 High Similarity NPC131486
0.9134 High Similarity NPC133609
0.9095 High Similarity NPC189079
0.8355 Intermediate Similarity NPC194740
0.8122 Intermediate Similarity NPC303658
0.789 Intermediate Similarity NPC471762
0.7845 Intermediate Similarity NPC305984
0.7778 Intermediate Similarity NPC470785
0.7778 Intermediate Similarity NPC470784
0.7741 Intermediate Similarity NPC66777
0.7739 Intermediate Similarity NPC476651
0.7737 Intermediate Similarity NPC184680
0.7637 Intermediate Similarity NPC198503
0.7623 Intermediate Similarity NPC473187
0.761 Intermediate Similarity NPC67401
0.7585 Intermediate Similarity NPC260909
0.7585 Intermediate Similarity NPC473041
0.7561 Intermediate Similarity NPC101350
0.7559 Intermediate Similarity NPC478083
0.755 Intermediate Similarity NPC81939
0.7521 Intermediate Similarity NPC323969
0.752 Intermediate Similarity NPC475666
0.752 Intermediate Similarity NPC235685
0.752 Intermediate Similarity NPC6786
0.75 Intermediate Similarity NPC237901
0.75 Intermediate Similarity NPC195788
0.7479 Intermediate Similarity NPC157931
0.7469 Intermediate Similarity NPC473449
0.746 Intermediate Similarity NPC91868
0.746 Intermediate Similarity NPC63971
0.7458 Intermediate Similarity NPC220851
0.7451 Intermediate Similarity NPC303374
0.745 Intermediate Similarity NPC469734
0.7448 Intermediate Similarity NPC477533
0.7448 Intermediate Similarity NPC150239
0.7426 Intermediate Similarity NPC152768
0.7426 Intermediate Similarity NPC148183
0.7417 Intermediate Similarity NPC477532
0.7407 Intermediate Similarity NPC478078
0.7406 Intermediate Similarity NPC288987
0.7404 Intermediate Similarity NPC87413
0.7402 Intermediate Similarity NPC473188
0.7398 Intermediate Similarity NPC329631
0.7398 Intermediate Similarity NPC473105
0.7397 Intermediate Similarity NPC21638
0.7375 Intermediate Similarity NPC128115
0.7375 Intermediate Similarity NPC174760
0.7373 Intermediate Similarity NPC264176
0.7364 Intermediate Similarity NPC247803
0.7359 Intermediate Similarity NPC295898
0.7359 Intermediate Similarity NPC475085
0.7359 Intermediate Similarity NPC291535
0.7359 Intermediate Similarity NPC475112
0.7355 Intermediate Similarity NPC122436
0.7353 Intermediate Similarity NPC330009
0.735 Intermediate Similarity NPC470931
0.735 Intermediate Similarity NPC205926
0.7349 Intermediate Similarity NPC474183
0.7347 Intermediate Similarity NPC209174
0.7344 Intermediate Similarity NPC280799
0.7341 Intermediate Similarity NPC78609
0.7322 Intermediate Similarity NPC169402
0.732 Intermediate Similarity NPC475816
0.7319 Intermediate Similarity NPC209769
0.7317 Intermediate Similarity NPC477531
0.7316 Intermediate Similarity NPC267423
0.7308 Intermediate Similarity NPC4687
0.7308 Intermediate Similarity NPC249583
0.7306 Intermediate Similarity NPC252251
0.7306 Intermediate Similarity NPC311906
0.73 Intermediate Similarity NPC308137
0.73 Intermediate Similarity NPC310211
0.7292 Intermediate Similarity NPC469594
0.7287 Intermediate Similarity NPC132329
0.728 Intermediate Similarity NPC322064
0.7273 Intermediate Similarity NPC208522
0.7269 Intermediate Similarity NPC471080
0.7269 Intermediate Similarity NPC469592
0.7265 Intermediate Similarity NPC257851
0.7261 Intermediate Similarity NPC72211
0.7253 Intermediate Similarity NPC134848
0.7252 Intermediate Similarity NPC132385
0.7249 Intermediate Similarity NPC70259
0.7247 Intermediate Similarity NPC475253
0.7247 Intermediate Similarity NPC260434
0.7246 Intermediate Similarity NPC201697
0.7238 Intermediate Similarity NPC116238
0.7227 Intermediate Similarity NPC48353
0.7222 Intermediate Similarity NPC470930
0.722 Intermediate Similarity NPC96321
0.7218 Intermediate Similarity NPC49547
0.7218 Intermediate Similarity NPC196718
0.7218 Intermediate Similarity NPC102593
0.7216 Intermediate Similarity NPC17437
0.7209 Intermediate Similarity NPC329982
0.7205 Intermediate Similarity NPC43787
0.7205 Intermediate Similarity NPC205934
0.7204 Intermediate Similarity NPC207620
0.7203 Intermediate Similarity NPC39679
0.7198 Intermediate Similarity NPC11017
0.7194 Intermediate Similarity NPC473540
0.7191 Intermediate Similarity NPC476106
0.719 Intermediate Similarity NPC219397
0.719 Intermediate Similarity NPC269270
0.719 Intermediate Similarity NPC37957
0.7188 Intermediate Similarity NPC270515
0.7184 Intermediate Similarity NPC115588
0.7184 Intermediate Similarity NPC179287
0.7181 Intermediate Similarity NPC478080
0.7179 Intermediate Similarity NPC169716
0.7167 Intermediate Similarity NPC476044
0.7166 Intermediate Similarity NPC274640
0.7164 Intermediate Similarity NPC471303
0.716 Intermediate Similarity NPC165964
0.716 Intermediate Similarity NPC14686
0.716 Intermediate Similarity NPC39370
0.7154 Intermediate Similarity NPC53534
0.7154 Intermediate Similarity NPC202503
0.7154 Intermediate Similarity NPC475844
0.7149 Intermediate Similarity NPC475720
0.7149 Intermediate Similarity NPC473186
0.7149 Intermediate Similarity NPC474192
0.7149 Intermediate Similarity NPC46561
0.7143 Intermediate Similarity NPC472588
0.7143 Intermediate Similarity NPC471304
0.7137 Intermediate Similarity NPC3207
0.7137 Intermediate Similarity NPC89549
0.7131 Intermediate Similarity NPC475910
0.7131 Intermediate Similarity NPC60621
0.7126 Intermediate Similarity NPC473185
0.7126 Intermediate Similarity NPC258048
0.7126 Intermediate Similarity NPC74575
0.7124 Intermediate Similarity NPC329747
0.7119 Intermediate Similarity NPC208084
0.7113 Intermediate Similarity NPC23294
0.7106 Intermediate Similarity NPC162484
0.7094 Intermediate Similarity NPC315634
0.7094 Intermediate Similarity NPC88923
0.7094 Intermediate Similarity NPC100734
0.7093 Intermediate Similarity NPC26543
0.7092 Intermediate Similarity NPC277351
0.7089 Intermediate Similarity NPC270918
0.7088 Intermediate Similarity NPC472589
0.7087 Intermediate Similarity NPC477066
0.7085 Intermediate Similarity NPC470018
0.7075 Intermediate Similarity NPC151171
0.7072 Intermediate Similarity NPC185197
0.7071 Intermediate Similarity NPC303951
0.7069 Intermediate Similarity NPC70956
0.7069 Intermediate Similarity NPC243834
0.7059 Intermediate Similarity NPC478081
0.7059 Intermediate Similarity NPC478082
0.7059 Intermediate Similarity NPC477067
0.7057 Intermediate Similarity NPC152620
0.7049 Intermediate Similarity NPC473179
0.7049 Intermediate Similarity NPC153923
0.7043 Intermediate Similarity NPC178858
0.704 Intermediate Similarity NPC474688
0.7039 Intermediate Similarity NPC306376
0.7039 Intermediate Similarity NPC100863
0.7034 Intermediate Similarity NPC284685
0.7033 Intermediate Similarity NPC144452
0.702 Intermediate Similarity NPC225279
0.7016 Intermediate Similarity NPC24370
0.7016 Intermediate Similarity NPC319232
0.7012 Intermediate Similarity NPC110182
0.7008 Intermediate Similarity NPC264285
0.7004 Intermediate Similarity NPC160898
0.7 Intermediate Similarity NPC326363
0.7 Intermediate Similarity NPC11464
0.6996 Remote Similarity NPC469928
0.6996 Remote Similarity NPC470001
0.6996 Remote Similarity NPC470002
0.6996 Remote Similarity NPC477549
0.6996 Remote Similarity NPC183407
0.6988 Remote Similarity NPC304307
0.6988 Remote Similarity NPC118559
0.6988 Remote Similarity NPC124920
0.6988 Remote Similarity NPC34580
0.6987 Remote Similarity NPC210828
0.6987 Remote Similarity NPC86834
0.6984 Remote Similarity NPC284888
0.6983 Remote Similarity NPC478074
0.698 Remote Similarity NPC41501
0.6964 Remote Similarity NPC16352
0.696 Remote Similarity NPC100547
0.6958 Remote Similarity NPC469589
0.6958 Remote Similarity NPC61038
0.6953 Remote Similarity NPC148889
0.6951 Remote Similarity NPC472099
0.6949 Remote Similarity NPC471944
0.6946 Remote Similarity NPC193777
0.6943 Remote Similarity NPC191489
0.6942 Remote Similarity NPC472098
0.6939 Remote Similarity NPC184408
0.6935 Remote Similarity NPC51388
0.6933 Remote Similarity NPC285558
0.6932 Remote Similarity NPC322135
0.6932 Remote Similarity NPC223409
0.6932 Remote Similarity NPC95240

  Chemically structural similarity: II. Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC244543 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.7714 Intermediate Similarity NPD6790 Phase 1
0.7679 Intermediate Similarity NPD6824 Clinical (unspecified phase)
0.7585 Intermediate Similarity NPD8459 Approved
0.7585 Intermediate Similarity NPD8460 Approved
0.7541 Intermediate Similarity NPD4373 Phase 2
0.7538 Intermediate Similarity NPD8363 Approved
0.7538 Intermediate Similarity NPD8364 Approved
0.75 Intermediate Similarity NPD8465 Approved
0.75 Intermediate Similarity NPD6376 Discontinued
0.75 Intermediate Similarity NPD8467 Approved
0.75 Intermediate Similarity NPD8466 Approved
0.749 Intermediate Similarity NPD4952 Phase 3
0.7489 Intermediate Similarity NPD3507 Phase 2
0.7481 Intermediate Similarity NPD8365 Clinical (unspecified phase)
0.7434 Intermediate Similarity NPD8428 Approved
0.7434 Intermediate Similarity NPD8429 Approved
0.7434 Intermediate Similarity NPD8427 Approved
0.7404 Intermediate Similarity NPD6567 Clinical (unspecified phase)
0.7398 Intermediate Similarity NPD6741 Clinical (unspecified phase)
0.7388 Intermediate Similarity NPD8425 Approved
0.7388 Intermediate Similarity NPD8426 Approved
0.7366 Intermediate Similarity NPD7393 Clinical (unspecified phase)
0.735 Intermediate Similarity NPD2916 Discontinued
0.7347 Intermediate Similarity NPD5479 Discontinued
0.7325 Intermediate Similarity NPD6247 Clinical (unspecified phase)
0.732 Intermediate Similarity NPD2921 Clinical (unspecified phase)
0.7309 Intermediate Similarity NPD4368 Phase 2
0.7294 Intermediate Similarity NPD5482 Discontinued
0.7292 Intermediate Similarity NPD5632 Approved
0.7289 Intermediate Similarity NPD8279 Clinical (unspecified phase)
0.7287 Intermediate Similarity NPD4885 Approved
0.7262 Intermediate Similarity NPD6716 Phase 1
0.7251 Intermediate Similarity NPD8016 Phase 3
0.7251 Intermediate Similarity NPD8017 Clinical (unspecified phase)
0.7238 Intermediate Similarity NPD5417 Clinical (unspecified phase)
0.7224 Intermediate Similarity NPD7426 Phase 1
0.7216 Intermediate Similarity NPD8358 Approved
0.7203 Intermediate Similarity NPD6530 Approved
0.7203 Intermediate Similarity NPD6531 Approved
0.7195 Intermediate Similarity NPD3259 Approved
0.7195 Intermediate Similarity NPD7268 Clinical (unspecified phase)
0.7183 Intermediate Similarity NPD7025 Clinical (unspecified phase)
0.7176 Intermediate Similarity NPD5488 Discontinued
0.7172 Intermediate Similarity NPD6995 Phase 1
0.7171 Intermediate Similarity NPD4958 Clinical (unspecified phase)
0.7167 Intermediate Similarity NPD5293 Phase 2
0.7131 Intermediate Similarity NPD7853 Phase 2
0.7114 Intermediate Similarity NPD3925 Approved
0.7105 Intermediate Similarity NPD7925 Phase 2
0.7105 Intermediate Similarity NPD7924 Phase 2
0.7097 Intermediate Similarity NPD8489 Phase 1
0.7094 Intermediate Similarity NPD7803 Approved
0.7087 Intermediate Similarity NPD7417 Discontinued
0.7085 Intermediate Similarity NPD3263 Phase 3
0.7078 Intermediate Similarity NPD7395 Discontinued
0.707 Intermediate Similarity NPD5483 Clinical (unspecified phase)
0.7068 Intermediate Similarity NPD5801 Clinical (unspecified phase)
0.7068 Intermediate Similarity NPD7589 Clinical (unspecified phase)
0.7059 Intermediate Similarity NPD7181 Phase 3
0.7056 Intermediate Similarity NPD7994 Phase 2
0.7043 Intermediate Similarity NPD8359 Phase 2
0.704 Intermediate Similarity NPD6962 Phase 2
0.704 Intermediate Similarity NPD7688 Phase 1
0.7034 Intermediate Similarity NPD7955 Approved
0.7034 Intermediate Similarity NPD7956 Approved
0.7033 Intermediate Similarity NPD6160 Clinical (unspecified phase)
0.7027 Intermediate Similarity NPD6525 Clinical (unspecified phase)
0.7024 Intermediate Similarity NPD2951 Discontinued
0.7021 Intermediate Similarity NPD7690 Clinical (unspecified phase)
0.7012 Intermediate Similarity NPD3746 Discontinued
0.7011 Intermediate Similarity NPD8463 Approved
0.7004 Intermediate Similarity NPD3946 Clinical (unspecified phase)
0.7 Intermediate Similarity NPD6503 Clinical (unspecified phase)
0.6996 Remote Similarity NPD3006 Discontinued
0.6996 Remote Similarity NPD8091 Phase 3
0.6992 Remote Similarity NPD6456 Discontinued
0.698 Remote Similarity NPD7194 Discontinued
0.6975 Remote Similarity NPD3003 Approved
0.6967 Remote Similarity NPD7823 Clinical (unspecified phase)
0.6966 Remote Similarity NPD5450 Discontinued
0.6965 Remote Similarity NPD4946 Phase 2
0.6951 Remote Similarity NPD6242 Discontinued
0.6947 Remote Similarity NPD4926 Clinical (unspecified phase)
0.6944 Remote Similarity NPD7031 Phase 1
0.6943 Remote Similarity NPD7708 Approved
0.6939 Remote Similarity NPD8405 Clinical (unspecified phase)
0.6935 Remote Similarity NPD7547 Clinical (unspecified phase)
0.6932 Remote Similarity NPD4981 Phase 2
0.6923 Remote Similarity NPD4923 Phase 1
0.6917 Remote Similarity NPD5040 Clinical (unspecified phase)
0.6917 Remote Similarity NPD7558 Phase 2
0.6917 Remote Similarity NPD5658 Approved
0.6901 Remote Similarity NPD5416 Discontinued
0.6894 Remote Similarity NPD8255 Phase 2
0.6892 Remote Similarity NPD7710 Clinical (unspecified phase)
0.6885 Remote Similarity NPD5903 Approved
0.6885 Remote Similarity NPD5902 Approved
0.6883 Remote Similarity NPD7180 Phase 3
0.688 Remote Similarity NPD5867 Clinical (unspecified phase)
0.6875 Remote Similarity NPD5429 Discontinued
0.686 Remote Similarity NPD4900 Clinical (unspecified phase)
0.686 Remote Similarity NPD6517 Phase 3
0.6855 Remote Similarity NPD5506 Approved
0.6855 Remote Similarity NPD5507 Approved
0.6832 Remote Similarity NPD3986 Discontinued
0.6831 Remote Similarity NPD8524 Approved
0.6809 Remote Similarity NPD5512 Phase 3
0.6798 Remote Similarity NPD5022 Discontinued
0.6797 Remote Similarity NPD5861 Clinical (unspecified phase)
0.6794 Remote Similarity NPD8102 Discontinued
0.6793 Remote Similarity NPD1768 Approved
0.6789 Remote Similarity NPD2433 Clinical (unspecified phase)
0.6772 Remote Similarity NPD1867 Approved
0.6766 Remote Similarity NPD6861 Clinical (unspecified phase)
0.6763 Remote Similarity NPD7174 Clinical (unspecified phase)
0.676 Remote Similarity NPD6209 Approved
0.6753 Remote Similarity NPD6773 Clinical (unspecified phase)
0.6752 Remote Similarity NPD5937 Approved
0.6748 Remote Similarity NPD4897 Phase 2
0.6748 Remote Similarity NPD7538 Clinical (unspecified phase)
0.6746 Remote Similarity NPD7603 Discontinued
0.6745 Remote Similarity NPD7797 Approved
0.6745 Remote Similarity NPD7796 Approved
0.6736 Remote Similarity NPD7222 Phase 2
0.6736 Remote Similarity NPD6321 Discontinued
0.6735 Remote Similarity NPD5866 Approved
0.6735 Remote Similarity NPD7069 Discontinued
0.6734 Remote Similarity NPD6568 Discontinued
0.6734 Remote Similarity NPD1926 Approved
0.6734 Remote Similarity NPD4429 Discontinued
0.6723 Remote Similarity NPD4118 Clinical (unspecified phase)
0.6721 Remote Similarity NPD8149 Discontinued
0.6707 Remote Similarity NPD6770 Approved
0.6707 Remote Similarity NPD3258 Approved
0.6706 Remote Similarity NPD7284 Clinical (unspecified phase)
0.6694 Remote Similarity NPD6220 Phase 3
0.6694 Remote Similarity NPD7470 Discontinued
0.6693 Remote Similarity NPD2285 Clinical (unspecified phase)
0.6693 Remote Similarity NPD5559 Phase 2
0.6667 Remote Similarity NPD7824 Approved
0.6667 Remote Similarity NPD2564 Approved
0.6667 Remote Similarity NPD4558 Phase 2
0.6667 Remote Similarity NPD6985 Discontinued
0.6667 Remote Similarity NPD2565 Phase 2
0.6655 Remote Similarity NPD7689 Approved
0.6655 Remote Similarity NPD8349 Phase 1
0.6654 Remote Similarity NPD7789 Approved
0.6654 Remote Similarity NPD7790 Approved
0.6654 Remote Similarity NPD4561 Discontinued
0.6654 Remote Similarity NPD7953 Approved
0.6654 Remote Similarity NPD7951 Approved
0.6654 Remote Similarity NPD7791 Approved
0.6654 Remote Similarity NPD7952 Approved
0.6654 Remote Similarity NPD4845 Discontinued
0.6654 Remote Similarity NPD7950 Approved
0.6653 Remote Similarity NPD7556 Discontinued
0.6653 Remote Similarity NPD5901 Discontinued
0.6641 Remote Similarity NPD1505 Phase 2
0.664 Remote Similarity NPD3945 Discontinued
0.6639 Remote Similarity NPD2510 Approved
0.6639 Remote Similarity NPD2509 Approved
0.6632 Remote Similarity NPD6745 Discontinued
0.6631 Remote Similarity NPD8107 Approved
0.663 Remote Similarity NPD6228 Discontinued
0.6627 Remote Similarity NPD7780 Approved
0.6627 Remote Similarity NPD7781 Approved
0.6627 Remote Similarity NPD5164 Discontinued
0.6626 Remote Similarity NPD4901 Clinical (unspecified phase)
0.6619 Remote Similarity NPD6153 Approved
0.6616 Remote Similarity NPD7921 Approved
0.6615 Remote Similarity NPD6263 Clinical (unspecified phase)
0.6615 Remote Similarity NPD5151 Clinical (unspecified phase)
0.6614 Remote Similarity NPD5850 Phase 3
0.6614 Remote Similarity NPD5433 Clinical (unspecified phase)
0.6612 Remote Similarity NPD2920 Discontinued
0.6611 Remote Similarity NPD4987 Clinical (unspecified phase)
0.6607 Remote Similarity NPD7416 Clinical (unspecified phase)
0.6604 Remote Similarity NPD8246 Approved
0.6604 Remote Similarity NPD8247 Approved
0.6598 Remote Similarity NPD1392 Approved
0.6593 Remote Similarity NPD8284 Discontinued
0.6588 Remote Similarity NPD7730 Approved
0.6588 Remote Similarity NPD7731 Approved
0.6586 Remote Similarity NPD8310 Clinical (unspecified phase)
0.6586 Remote Similarity NPD3389 Approved
0.6586 Remote Similarity NPD3393 Approved
0.6586 Remote Similarity NPD3394 Approved
0.6584 Remote Similarity NPD3947 Discontinued
0.6584 Remote Similarity NPD3298 Approved
0.6581 Remote Similarity NPD4948 Discontinued
0.6575 Remote Similarity NPD7271 Approved
0.6574 Remote Similarity NPD6974 Phase 3
0.657 Remote Similarity NPD2779 Approved
0.6569 Remote Similarity NPD5003 Discontinued
0.6568 Remote Similarity NPD5592 Clinical (unspecified phase)
0.6568 Remote Similarity NPD5116 Phase 1
0.6564 Remote Similarity NPD6963 Approved
0.6564 Remote Similarity NPD6964 Approved
0.6561 Remote Similarity NPD8311 Discontinued
0.6559 Remote Similarity NPD8108 Approved

  Bioactivity similarity: Similar Natural Products in NPASS

Bioactivity similarity was calculated based on bioactivity descriptors of compounds. The bioactivity descriptors were calculated by a recently developed AI algorithm Chemical Checker (CC) [Nature Biotechnology, 38:1087–1096, 2020; Nature Communications, 12:3932, 2021], which evaluated bioactivity similarities at five levels:
A: chemistry similarity;
B: biological targets similarity;
C: networks similarity;
D: cell-based bioactivity similarity;
E: similarity based on clinical data.

Those 5 categories of CC bioactivity descriptors were calculated and then subjected to manifold projection using UMAP algorithm, to project all NPs on a 2-Dimensional space. The current NP was highlighted with a small circle in the 2-D map. Below figures: left-to-right, A-to-E.

A: chemistry similarity
B: biological targets similarity
C: networks similarity
D: cell-based bioactivity similarity
E: similarity based on clinical data