Natural Product: NPC64141| Natural Product ID | NPC64141 |
|
Common Name
The InCHIKey will be temporarily assigned as the "Common Name" if no IUPAC name or alternative short name is available.
| Isoacteoside |
| IUPAC Name | [(2R,3R,4S,5R,6R)-6-[2-(3,4-dihydroxyphenyl)ethoxy]-3,5-dihydroxy-4-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]methyl (E)-3-(3,4-dihydroxyphenyl)prop-2-enoate |
| Synonyms | Isoacetoside; Isoacteoside; Isoverbascoside |
| Synthetic Gene Cluster | n.a. |
| ChEMBL Identifier | CHEMBL504873 |
| PubChem CID |
6476333 |
| Chemical Classification |
|
The Chemical Classification was calculated by Classyfire, a software for chemical taxonomy calculation. Reference: DOI:10.1186/s13321-016-0174-y.
Chemical Representations
| Standard InCHIKey | FNMHEHXNBNCPCI-QEOJJFGVSA-N |
| Standard InCHI | InChI=1S/C29H36O15/c1-13-22(35)24(37)25(38)29(42-13)44-27-23(36)20(12-41-21(34)7-4-14-2-5-16(30)18(32)10-14)43-28(26(27)39)40-9-8-15-3-6-17(31)19(33)11-15/h2-7,10-11,13,20,22-33,35-39H,8-9,12H2,1H3/b7-4+/t13-,20+,22-,23+,24+,25+,26+,27-,28+,29-/m0/s1 |
| SMILES | O=C(OC[C@H]1O[C@@H](OCCc2ccc(c(c2)O)O)[C@@H]([C@H]([C@@H]1O)O[C@@H]1O[C@@H](C)[C@@H]([C@H]([C@H]1O)O)O)O)/C=C/c1ccc(c(c1)O)O |
  Calculated Properties| Molecular Weight:   | 624.21 | Volume:   | 586.676 Van der Waals volume.
|
| Dense:   | 1.064 | LogP:   | 1.049 The logarithm of the n-octanol/water distribution coefficients.
|
| logD7.4:   | 1.588 The logarithm of the n-octanol/water distribution coefficient at pH=7.4.
|
LogS:   | -2.167 The logarithm of aqueous solubility value.
|
| Rotatable Bonds:   | 11.0 | Rigid Bonds:   | 26.0 |
| TPSA:   | 245.29 Topological Polar Surface Area.
|
H-Bond Acceptor:   | 15.0 |
| H-Bond Donor:   | 9.0 | Rings:   | 4.0 |
| Heavy Atoms:   | 15.0 |
| QED Drug-Likeness Score:   | 0.087 | GASA:   | 1.0 GASA represents the probability of being difficult to synthesize, ranging from 0 to 1.
|
| Synthetic Accessibility Score:   | 4.708 | Fsp3:   | 0.483 |
| MCE-18:   | 100.488 MCE-18 stands for medicinal chemistry evolution.MCE-18≥45 is considered a suitable value.
|
Lipinski Rule-of-5:   | Accepted |
| Pfizer Rule:   | Rejected | GSK Rule:   | Accepted |
| Golden Triangle Rule:   | Accepted | BMS Rule:   | 0 |
| Chelating Alert:   | 1 | PAINS Alert:   | 1 |
| Colloidal aggregators:   | 0.667 | Fluc inhibitor:   | 0.693 The fluc inhibitor value is the probability of being fLuc inhibitors, within the range of 0 to 1.
|
| Blue fluorescence:   | 0.111 The blue fluorescence value is the probability of being blue fluorescence, within the range of 0 to 1
|
Green fluorescence:   | 0.6 The green fluorescence value is the probability of being green fluorescence, within the range of 0 to 1
|
| Reactive compounds:   | 0.173 | Promiscuous compounds:   | 0.432 |
| Caco-2 Permeability:   | -6.53 | MDCK Permeability:   | -5.206 |
| Pgp-inhibitor:   | 0.0 | Pgp-substrate:   | 0.022 |
| PAMPA:   |
0.996 The experimental data for Peff was logarithmically transformed (logPeff). Molecules with log Peff values below 2.0 were classified as low-permeability (Category 0), while those with log Peff values exceeding 2.5 were classified as high-permeability (Category 1).
|
Human Intestinal Absorption (HIA):   | 0.958 |
| 20% Bioavailability (F20%):   | 0.999 | 30% Bioavailability (F30%):   | 1.0 |
| 50% Bioavailability (F50%):   | 1.0 |
| Blood-Brain-Barrier Penetration (BBB):   | 0.003 | MRP1:   | 0.006 |
| Plasma Protein Binding (PPB):   | 72.138% | Volume Distribution (VD):   | -0.41 |
| Fu: |
23.829% The fraction unbound in plasms.
|
OATP1B1 inhibitor:   | 1.0 |
| OATP1B3 inhibitor:   | 1.0 | BCRP inhibitor:   | 0.006 |
| BSEP inhibitor:   | 0.002 |
| CYP1A2-inhibitor:   | 0.0 | CYP1A2-substrate:   | 0.0 |
| CYP2C19-inhibitor:   | 0.0 | CYP2C19-substrate:   | 0.008 |
| CYP2C9-inhibitor:   | 0.0 | CYP2C9-substrate:   | 0.0 |
| CYP2D6-inhibitor:   | 0.0 | CYP2D6-substrate:   | 0.759 |
| CYP3A4-inhibitor:   | 0.0 | CYP3A4-substrate:   | 0.997 |
| CYP2B6-substrate:   | 0.0 | CYP2C8-inhibitor:   | 1.0 |
| HLM stability:   |
0.998 Human liver microsomal (HLM) stability. Category 0: stable+ (HLM > 30 min); Category 1: unstable- (HLM ≤ 30 min). The output value is the probability of human liver microsomal instability, where a value closer to 1 indicates a higher likelihood of instability.
|
| Clearance (CL):   | 3.107 | Half-life (T1/2):   | 4.511 |
| hERG Blockers:   | 0.052 | hERG Blockers (10um):   | 0.581 |
| Human Hepatotoxicity (H-HT):   | 0.285 | Drug-induced Liver Injury (DILI):   | 0.892 |
| AMES Toxicity:   | 0.935 | Rat Oral Acute Toxicity:   | 0.01 |
| Maximum Recommended Daily Dose:   | 0.081 | Skin Sensitization:   | 1.0 |
| Carcinogencity:   | 0.029 | Eye Corrosion:   | 0.0 |
| Eye Irritation:   | 0.088 | Respiratory Toxicity:   | 0.003 |
| Drug-induced Neurotoxicity:   | 0.0 | Ototoxicity:   | 0.996 |
| Hematotoxicity:   | 0.051 | Drug-induced Nephrotoxicity:   | 0.248 |
| Genotoxicity:   | 0.73 | RPMI-8226 Immunitoxicity:   | 0.031 |
| A549 Cytotoxicity:   | 0.983 | Hek293 Cytotoxicity:   | 0.603 |
| BCF:   |
0.688 Bioconcentration factors are used for considering secondary poisoning potential and assessing risks to human health via the food chain. The unit is -log10[(mg/L)/(1000*MW)].
|
IGC50:   |
3.394 48 hour Tetrahymena pyriformis IGC50. The unit of IGC50 is -log10[(mg/L)/(1000*MW)].
|
| LC50DM:   |
4.956 48 hour Daphnia magna LC50. The unit of LC50DM is -log10[(mg/L)/(1000*MW)].
|
LC50FM:   |
4.453 96 hour fathead minnow LC50. The unit of LC50FM is -log10[(mg/L)/(1000*MW)].
|
  Species Source| Organism ID | Organism Name | Taxonomy Level | Family | SuperKingdom | Isolation Part | Collection Location | Collection Time | Reference |
|---|---|---|---|---|---|---|---|---|
| NPO12110 | Bauhinia tarapotensis | Species | Fabaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[11473417] |
| NPO10031 | Euphorbia antiquorum | Species | Euphorbiaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[11858748] |
| NPO29463 | Pogostemon cablin | Species | Lamiaceae | Eukaryota | n.a. | leaf | n.a. |
PMID[12575075] |
| NPO29463 | Pogostemon cablin | Species | Lamiaceae | Eukaryota | n.a. | stem | n.a. |
PMID[12575075] |
| NPO16076 | Penicillium chrysogenum | Species | Aspergillaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[1367520] |
| NPO14242 | Maytenus laevis | Species | Celastraceae | Eukaryota | bark | Leticia, Colombia | n.a. |
PMID[15568791] |
| NPO29463 | Pogostemon cablin | Species | Lamiaceae | Eukaryota | n.a. | whole plant | n.a. |
PMID[15577255] |
| NPO21591 | Psorothamnus polydenius | Species | Fabaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[15679330] |
| NPO21591 | Psorothamnus polydenius | Species | Fabaceae | Eukaryota | n.a. | leaf | n.a. |
PMID[15679330] |
| NPO21591 | Psorothamnus polydenius | Species | Fabaceae | Eukaryota | n.a. | twig | n.a. |
PMID[15679330] |
| NPO21591 | Psorothamnus polydenius | Species | Fabaceae | Eukaryota | n.a. | flower | n.a. |
PMID[15679330] |
| NPO16076 | Penicillium chrysogenum | Species | Aspergillaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[15974609] |
| NPO1939 | Swartzia langsdorffii | Species | Fabaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[16124782] |
| NPO5912 | Globularia alypum | Species | Plantaginaceae | Eukaryota | n.a. | aerial part | n.a. |
PMID[16124783] |
| NPO5912 | Globularia alypum | Species | Plantaginaceae | Eukaryota | aerial parts | Morocco | n.a. |
PMID[16124783] |
| NPO13010 | Allium stipitatum | Species | Amaryllidaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[19093848] |
| NPO13010 | Allium stipitatum | Species | Amaryllidaceae | Eukaryota | n.a. | bulb | n.a. |
PMID[19093848] |
| NPO982 | Phlomis brunneogaleata | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[19299148] |
| NPO28152 | Jacaranda caucana | Species | Bignoniaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[19361168] |
| NPO6964 | Cistanche tubulosa | Species | Orobanchaceae | Eukaryota | fresh stems | n.a. | n.a. |
PMID[20159656] |
| NPO21509 | Laurencia similis | Species | Rhodomelaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[20961755] |
| NPO16076 | Penicillium chrysogenum | Species | Aspergillaceae | Eukaryota | n.a. | mycelium | n.a. |
PMID[21381678] |
| NPO25682 | Acorus calamus | Species | Acoraceae | Eukaryota | n.a. | rhizome | n.a. |
PMID[21563811] |
| NPO16076 | Penicillium chrysogenum | Species | Aspergillaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[21667925] |
| NPO16076 | Penicillium chrysogenum | Species | Aspergillaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[22118684] |
| NPO20240 | Discodermia calyx | Species | Theonellidae | Eukaryota | n.a. | n.a. | n.a. |
PMID[22276742] |
| NPO25682 | Acorus calamus | Species | Acoraceae | Eukaryota | rhizomes | n.a. | n.a. |
PMID[22671987] |
| NPO8101 | Rehmannia glutinosa | Species | Orobanchaceae | Eukaryota | Roots | n.a. | n.a. |
PMID[22916954] |
| NPO25682 | Acorus calamus | Species | Acoraceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[23373216] |
| NPO40812 | Castilleja linariaefolia | Species | n.a. | n.a. | n.a. | n.a. | n.a. |
PMID[2380718] |
| NPO27031 | Methanosarcina barkeri | Species | Methanosarcinaceae | Archaea | n.a. | n.a. | n.a. |
PMID[24669201] |
| NPO10031 | Euphorbia antiquorum | Species | Euphorbiaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[24840014] |
| NPO3477 | Plantago asiatica | Species | Plantaginaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[2488968] |
| NPO10680 | Cistanche deserticola | Species | Orobanchaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[25900014] |
| NPO3477 | Plantago asiatica | Species | Plantaginaceae | Eukaryota | n.a. | seed | n.a. |
PMID[2610694] |
| NPO13153 | Callicarpa macrophylla | Species | Lamiaceae | Eukaryota | Leaves | n.a. | n.a. |
PMID[26110519] |
| NPO8918 | Plantago depressa | Species | Plantaginaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[26562611] |
| NPO16076 | Penicillium chrysogenum | Species | Aspergillaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[26692349] |
| NPO20240 | Discodermia calyx | Species | Theonellidae | Eukaryota | n.a. | n.a. | n.a. |
PMID[28290701] |
| NPO29463 | Pogostemon cablin | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[30188125] |
| NPO40190 | Lippia rubella | Species | Verbenaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[30817148] |
| NPO10031 | Euphorbia antiquorum | Species | Euphorbiaceae | Eukaryota | Stems | n.a. | n.a. |
PMID[31180680] |
| NPO16076 | Penicillium chrysogenum | Species | Aspergillaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[33089690] |
| NPO25682 | Acorus calamus | Species | Acoraceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[35872238] |
| NPO48361 | Clerodendrum glandulosum | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[39621736] |
| NPO16076 | Penicillium chrysogenum | Species | Aspergillaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[8626236] |
| NPO6610 | Markhamia lutea | Species | Bignoniaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[9599250] |
| NPO13153 | Callicarpa macrophylla | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO5995 | Spartium junceum | Species | Fabaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO12103 | Salvia ballotiflora | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO14327 | Scabiosa comosa | Species | Caprifoliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO10031 | Euphorbia antiquorum | Species | Euphorbiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO29463 | Pogostemon cablin | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO4129 | Veronica persica | Species | Plantaginaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO3734 | Vigna umbellata | Species | Fabaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO10680 | Cistanche deserticola | Species | Orobanchaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO6964 | Cistanche tubulosa | Species | Orobanchaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO16365 | Ageratum tomentosum | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO25682 | Acorus calamus | Species | Acoraceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO8101 | Rehmannia glutinosa | Species | Orobanchaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO22203 | Tapinella panuoides | Species | Tapinellaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO15404 | Streptomyces erythrochromogenes | Species | Streptomycetaceae | Bacteria | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO15898 | Streptomyces noursei | Species | Streptomycetaceae | Bacteria | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO19048 | Pinellia ternata | Species | Araceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO28152 | Jacaranda caucana | Species | Bignoniaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO15108 | Angiopteris evecta | Species | Marattiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO14454 | Plectranthus lanuginosus | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO3477 | Plantago asiatica | Species | Plantaginaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO13914 | Fraxinus ornus | Species | Oleaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO21591 | Psorothamnus polydenius | Species | Fabaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO27031 | Methanosarcina barkeri | Species | Methanosarcinaceae | Archaea | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO20856 | Pyrethrum santolinoides | n.a. | n.a. | n.a. | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO8918 | Plantago depressa | Species | Plantaginaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO21509 | Laurencia similis | Species | Rhodomelaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO5565 | Harpagophytum procumbens | Species | Pedaliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO6610 | Markhamia lutea | Species | Bignoniaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO23170 | Orobanche coerulescens | Species | Orobanchaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO982 | Phlomis brunneogaleata | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO14965 | Lepidophorum repandum | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO15621 | Lethasterias fusca | Species | Asteriidae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO14242 | Maytenus laevis | Species | Celastraceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO11584 | Artemisia argentea | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO12480 | Brodiaea californica | Species | Asparagaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO9917 | Plagiomnium cuspidatum | Species | Mniaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO28240 | Notholaena lemmonii | Species | Pteridaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO12110 | Bauhinia tarapotensis | Species | Fabaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO5912 | Globularia alypum | Species | Plantaginaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO20240 | Discodermia calyx | Species | Theonellidae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO14614 | Kopsia longiflora | Species | Apocynaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO17830 | Adonis aleppica | Species | Ranunculaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO5137 | Myristica malabarica | Species | Myristicaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO4838 | Phlomis umbrosa | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO13743 | Populus yunnanensis | Species | Salicaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO15087 | Alstonia pittieri | Species | Apocynaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO16161 | Stephania aculeata | Species | Menispermaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO12777 | Laurencia pacifica | Species | Rhodomelaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO1124 | Scapania aequiloba | Species | Scapaniaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO4039 | Verbascum pseudonobile | Species | Scrophulariaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO8101 | Rehmannia glutinosa | Species | Orobanchaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO6964 | Cistanche tubulosa | Species | Orobanchaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO3477 | Plantago asiatica | Species | Plantaginaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO982 | Phlomis brunneogaleata | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO10680 | Cistanche deserticola | Species | Orobanchaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO5995 | Spartium junceum | Species | Fabaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO4129 | Veronica persica | Species | Plantaginaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO14327 | Scabiosa comosa | Species | Caprifoliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO23170 | Orobanche coerulescens | Species | Orobanchaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO10031 | Euphorbia antiquorum | Species | Euphorbiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO19048 | Pinellia ternata | Species | Araceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO8918 | Plantago depressa | Species | Plantaginaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO29463 | Pogostemon cablin | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO25682 | Acorus calamus | Species | Acoraceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO13914 | Fraxinus ornus | Species | Oleaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO18558 | Abies alba | Species | Pinaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO5565 | Harpagophytum procumbens | Species | Pedaliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO151 | Pedicularis striata | Species | Orobanchaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO4838 | Phlomis umbrosa | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO20106 | Polygala sabulosa | Species | Polygalaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO30076 | Lippia dulcis | Species | Verbenaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO5137 | Myristica malabarica | Species | Myristicaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO14614 | Kopsia longiflora | Species | Apocynaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO8101 | Rehmannia glutinosa | Species | Orobanchaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO18558 | Abies alba | Species | Pinaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO10680 | Cistanche deserticola | Species | Orobanchaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO29463 | Pogostemon cablin | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO18120 | Radix rehmanniae | Species | Lymnaeidae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO982 | Phlomis brunneogaleata | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO13914 | Fraxinus ornus | Species | Oleaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO25682 | Acorus calamus | Species | Acoraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO10031 | Euphorbia antiquorum | Species | Euphorbiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO4129 | Veronica persica | Species | Plantaginaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO8918 | Plantago depressa | Species | Plantaginaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO3477 | Plantago asiatica | Species | Plantaginaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO4203 | Phlomoides rotata | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO14614 | Kopsia longiflora | Species | Apocynaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO19048 | Pinellia ternata | Species | Araceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO23388 | Phyla dulcis | Species | Verbenaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO14327 | Scabiosa comosa | Species | Caprifoliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO5565 | Harpagophytum procumbens | Species | Pedaliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO5995 | Spartium junceum | Species | Fabaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO6964 | Cistanche tubulosa | Species | Orobanchaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO23170 | Orobanche coerulescens | Species | Orobanchaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO77 | Brandisia hancei | Species | Orobanchaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO151 | Pedicularis striata | Species | Orobanchaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO13153 | Callicarpa macrophylla | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO4838 | Phlomis umbrosa | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO20106 | Polygala sabulosa | Species | Polygalaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO5137 | Myristica malabarica | Species | Myristicaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO9917 | Plagiomnium cuspidatum | Species | Mniaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO18116 | Dregea volubilis | Species | Apocynaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO29463 | Pogostemon cablin | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO3477 | Plantago asiatica | Species | Plantaginaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO23170 | Orobanche coerulescens | Species | Orobanchaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO8101 | Rehmannia glutinosa | Species | Orobanchaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO19048 | Pinellia ternata | Species | Araceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO14327 | Scabiosa comosa | Species | Caprifoliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO13914 | Fraxinus ornus | Species | Oleaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO10680 | Cistanche deserticola | Species | Orobanchaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO8918 | Plantago depressa | Species | Plantaginaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO5995 | Spartium junceum | Species | Fabaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO25682 | Acorus calamus | Species | Acoraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO4838 | Phlomis umbrosa | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO3477 | Plantago asiatica | Species | Plantaginaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO19048 | Pinellia ternata | Species | Araceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO8101 | Rehmannia glutinosa | Species | Orobanchaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO29463 | Pogostemon cablin | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO4203 | Phlomoides rotata | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO10680 | Cistanche deserticola | Species | Orobanchaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO8918 | Plantago depressa | Species | Plantaginaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO23170 | Orobanche coerulescens | Species | Orobanchaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO3734 | Vigna umbellata | Species | Fabaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO5565 | Harpagophytum procumbens | Species | Pedaliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO6964 | Cistanche tubulosa | Species | Orobanchaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO13153 | Callicarpa macrophylla | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO13477 | Cyberlindnera jadinii | Species | Phaffomycetaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO22203 | Tapinella panuoides | Species | Tapinellaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO151 | Pedicularis striata | Species | Orobanchaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO13225 | Spergula japonica | Species | Caryophyllaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO255 | Solanum pseudopersicum | Species | Solanaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO16161 | Stephania aculeata | Species | Menispermaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO15087 | Alstonia pittieri | Species | Apocynaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO28240 | Notholaena lemmonii | Species | Pteridaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO13010 | Allium stipitatum | Species | Amaryllidaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO10031 | Euphorbia antiquorum | Species | Euphorbiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO14614 | Kopsia longiflora | Species | Apocynaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO14454 | Plectranthus lanuginosus | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO11584 | Artemisia argentea | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO2667 | Acacia lasiopetala | Species | Fabaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO27134 | Euphrasia rubra | Species | Orobanchaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO8918 | Plantago depressa | Species | Plantaginaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO8556 | Eucalyptus kitsoniana | Species | Myrtaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO5995 | Spartium junceum | Species | Fabaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO10527 | Cyathula tomentosa | Species | Amaranthaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO26381 | Bombus pascuorum | Species | Apidae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO15513 | Pseudocyphellaria rubella | Species | Lobariaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO15806 | Rhododendron campylocarpum | Species | Ericaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO3477 | Plantago asiatica | Species | Plantaginaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO1777 | Toddalia aculeata | Species | Rutaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO9299.3 | Hordeum vulgare var. distichon | Varieties | Poaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO8142 | Pinus pumilio | Species | Pinaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO15718 | Lindera sericea | Species | Tineidae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO1124 | Scapania aequiloba | Species | Scapaniaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO5137 | Myristica malabarica | Species | Myristicaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO15108 | Angiopteris evecta | Species | Marattiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO8101 | Rehmannia glutinosa | Species | Orobanchaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO13460 | Asphodeline damascena | Species | Asphodelaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO16076 | Penicillium chrysogenum | Species | Aspergillaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO9917 | Plagiomnium cuspidatum | Species | Mniaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO27031 | Methanosarcina barkeri | Species | Methanosarcinaceae | Archaea | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO10680 | Cistanche deserticola | Species | Orobanchaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO15898 | Streptomyces noursei | Species | Streptomycetaceae | Bacteria | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO22101 | Himantoglossum hircinum | Species | Orchidaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO15404 | Streptomyces erythrochromogenes | Species | Streptomycetaceae | Bacteria | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO25577 | Samuela carnerosana | n.a. | n.a. | n.a. | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO26951 | Gymnopus androsaceus | Species | Omphalotaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO13743 | Populus yunnanensis | Species | Salicaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO18116 | Dregea volubilis | Species | Apocynaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO20106 | Polygala sabulosa | Species | Polygalaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO16786 | Fagus pumilio | Species | Fagaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO12110 | Bauhinia tarapotensis | Species | Fabaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO5912 | Globularia alypum | Species | Plantaginaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO11243 | Exochorda giraldii | Species | Rosaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO1939 | Swartzia langsdorffii | Species | Fabaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO14327 | Scabiosa comosa | Species | Caprifoliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO12777 | Laurencia pacifica | Species | Rhodomelaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO19048 | Pinellia ternata | Species | Araceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO15817 | Alternaria scirpicola | Species | Pleosporaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO12480 | Brodiaea californica | Species | Asparagaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO4129 | Veronica persica | Species | Plantaginaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO21851 | Chaetomella raphigera | Species | Chaetomellaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO14965 | Lepidophorum repandum | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO20240 | Discodermia calyx | Species | Theonellidae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO17830 | Adonis aleppica | Species | Ranunculaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO18558 | Abies alba | Species | Pinaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO29322 | Rhodanthe maryonii | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO77 | Brandisia hancei | Species | Orobanchaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO6610 | Markhamia lutea | Species | Bignoniaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO4039 | Verbascum pseudonobile | Species | Scrophulariaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO15621 | Lethasterias fusca | Species | Asteriidae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO982 | Phlomis brunneogaleata | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO28152 | Jacaranda caucana | Species | Bignoniaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO13153 | Callicarpa macrophylla | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO3734 | Vigna umbellata | Species | Fabaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO6964 | Cistanche tubulosa | Species | Orobanchaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO14003 | Crotalaria lachnosema | Species | Fabaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO8446 | Alnus mandshurica | Species | Betulaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO1009 | Stentor coeruleus | Species | Stentoridae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO13914 | Fraxinus ornus | Species | Oleaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO4203 | Phlomoides rotata | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO3828 | Cereus pachanoi | Species | Sagartiidae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO23170 | Orobanche coerulescens | Species | Orobanchaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO23388 | Phyla dulcis | Species | Verbenaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO29463 | Pogostemon cablin | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO20437 | Chrysothamnus stylosus | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO21509 | Laurencia similis | Species | Rhodomelaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO20303 | Artemisia kulbadica | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO12103 | Salvia ballotiflora | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO21591 | Psorothamnus polydenius | Species | Fabaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO25682 | Acorus calamus | Species | Acoraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO16365 | Ageratum tomentosum | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO14242 | Maytenus laevis | Species | Celastraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO12751 | Ajuga japonica | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO4838 | Phlomis umbrosa | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO20856 | Pyrethrum santolinoides | n.a. | n.a. | n.a. | n.a. | n.a. | n.a. | Database[UNPD] |
Note for Reference:
In addition to directly collecting NP source organism data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated them from below databases:
☉ UNPD: Universal Natural Products Database [PMID: 23638153].
☉ StreptomeDB: a database of streptomycetes natural products [PMID: 33051671].
☉ TM-MC: a database of medicinal materials and chemical compounds in Northeast Asian traditional medicine [PMID: 26156871].
☉ TCM@Taiwan: a Traditional Chinese Medicine database [PMID: 21253603].
☉ TCMID: a Traditional Chinese Medicine database [PMID: 29106634].
☉ TCMSP: The traditional Chinese medicine systems pharmacology database and analysis platform [PMID: 24735618].
☉ HerDing: a herb recommendation system to treat diseases using genes and chemicals [PMID: 26980517].
☉ MetaboLights: a metabolomics database [PMID: 27010336].
☉ FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].
  NP Quantity Composition/Concentration| Organism ID | Organism Name | Organism Material Preparation | Organism Part | NP Quantity (Standard) | NP Quantity (Minimum) | NP Quantity (Maximum) | Quantity Unit | Reference |
|---|---|---|---|---|---|---|---|---|
| NPO48361 | Clerodendrum glandulosum | n.a. | Leaves | 3.71±0.33 | n.a. | n.a. | mg/g |
PMID[39621736] |
| NPO48361 | Clerodendrum glandulosum | n.a. | Leaves | 5.19±0.20 | n.a. | n.a. | mg/g |
PMID[39621736] |
| NPO48361 | Clerodendrum glandulosum | n.a. | Leaves | 78.10±0.17 | n.a. | n.a. | mg/g |
PMID[39621736] |
| NPO48361 | Clerodendrum glandulosum | n.a. | Leaves | 29.81±0.67 | n.a. | n.a. | mg/g |
PMID[39621736] |
Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP quantitative records for specific NP domains (e.g., NPS from foods or herbs) from domain-specific databases. These databases include:
☉ DUKE: Dr. Duke's Phytochemical and Ethnobotanical Databases.
☉ PHENOL EXPLORER: is the first comprehensive database on polyphenol content in foods [PMID: 24103452], its homepage can be accessed at here.
☉ FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].
Biological Activity
| Target ID | Target Type | Target Name | Target Organism | Activity Type | Activity Relation | Value | Unit | Reference |
|---|---|---|---|---|---|---|---|---|
| NPT280 | Individual protein | Matrix metalloproteinase 9 | Homo sapiens | IC50 | = | 14280.0 | nM | PMID[22658537] |
| NPT1089 | Individual protein | Matrix metalloproteinase 12 | Homo sapiens | IC50 | = | 8220.0 | nM | PMID[22658537] |
| NPT1090 | Individual protein | Matrix metalloproteinase 13 | Homo sapiens | IC50 | = | 11090.0 | nM | PMID[22658537] |
| NPT280 | Individual protein | Matrix metalloproteinase 9 | Homo sapiens | Inhibition | > | 30.0 | % | PMID[22658537] |
| NPT1089 | Individual protein | Matrix metalloproteinase 12 | Homo sapiens | Inhibition | > | 30.0 | % | PMID[22658537] |
| NPT1090 | Individual protein | Matrix metalloproteinase 13 | Homo sapiens | Inhibition | > | 30.0 | % | PMID[22658537] |
| NPT567 | Individual protein | Matrix metalloproteinase 3 | Homo sapiens | IC50 | = | 91410.0 | nM | PMID[22658537] |
| NPT567 | Individual protein | Matrix metalloproteinase 3 | Homo sapiens | Inhibition | > | 30.0 | % | PMID[22658537] |
| NPT568 | Individual protein | Matrix metalloproteinase-2 | Homo sapiens | IC50 | = | 8960.0 | nM | PMID[22658537] |
| NPT568 | Individual protein | Matrix metalloproteinase-2 | Homo sapiens | Inhibition | > | 30.0 | % | PMID[22658537] |
| Target ID | Target Type | Target Name | Target Organism | Activity Type | Activity Relation | Value | Unit | Reference |
|---|---|---|---|---|---|---|---|---|
| NPT168 | Cell line | P388 | Mus musculus | ED50 | = | 10.0 | ug ml-1 | PMID[2380718] |
| NPT927 | Cell line | PBMC | Homo sapiens | Activity | = | 101.5 | pg/ml | PMID[15568791] |
| NPT927 | Cell line | PBMC | Homo sapiens | Activity | = | 175.5 | pg/ml | PMID[15568791] |
| NPT927 | Cell line | PBMC | Homo sapiens | Activity | < | 7.8 | pg/ml | PMID[15568791] |
| NPT993 | Cell line | Hepatocyte | Mus musculus | Inhibition | = | 43.7 | % | PMID[20159656] |
| NPT993 | Cell line | Hepatocyte | Mus musculus | Inhibition | = | 57.3 | % | PMID[20159656] |
| NPT993 | Cell line | Hepatocyte | Mus musculus | Inhibition | = | 101.2 | % | PMID[20159656] |
| NPT993 | Cell line | Hepatocyte | Mus musculus | IC50 | = | 5300.0 | nM | PMID[20159656] |
| NPT1460 | Cell line | L929 | Mus musculus | Inhibition | = | -4.6 | % | PMID[20159656] |
| NPT1460 | Cell line | L929 | Mus musculus | Inhibition | = | 19.0 | % | PMID[20159656] |
| NPT1460 | Cell line | L929 | Mus musculus | Inhibition | = | 61.9 | % | PMID[20159656] |
| NPT1460 | Cell line | L929 | Mus musculus | Inhibition | = | 102.4 | % | PMID[20159656] |
| NPT1460 | Cell line | L929 | Mus musculus | IC50 | = | 22.7 | ug.mL-1 | PMID[20159656] |
| NPT70 | Organism | Respiratory syncytial virus | Respiratory syncytial virus | EC50 | = | 0.17 | ug.mL-1 | PMID[9599250] |
| NPT70 | Organism | Respiratory syncytial virus | Respiratory syncytial virus | EC50 | = | 1.1 | ug.mL-1 | PMID[9599250] |
| NPT70 | Organism | Respiratory syncytial virus | Respiratory syncytial virus | EC50 | = | 0.62 | ug.mL-1 | PMID[9599250] |
| NPT28833 | No target | No relevant target | n.a. | IC50 | = | 0.16 | ug.mL-1 | PMID[34999211] |
| NPT28833 | No target | No relevant target | n.a. | IC50 | = | 3.0 | ug.mL-1 | PMID[34999211] |
| NPT20529 | Non-molecular | NON-PROTEIN TARGET | n.a. | Activity | = | 1.228 | n.a. | PMID[11473417] |
| NPT20529 | Non-molecular | NON-PROTEIN TARGET | n.a. | Activity | = | 24.6 | n.a. | PMID[11473417] |
| NPT20529 | Non-molecular | NON-PROTEIN TARGET | n.a. | Activity | = | 7.2 | n.a. | PMID[11473417] |
| NPT20529 | Non-molecular | NON-PROTEIN TARGET | n.a. | EC50 | = | 1200.0 | nM | PMID[19361168] |
| NPT1 | Others | Radical scavenging activity | n.a. | IC50 | = | 1300.0 | nM | PMID[11473417] |
| NPT1 | Others | Radical scavenging activity | n.a. | IC50 | = | 20000.0 | nM | PMID[16124783] |
| NPT2 | Others | Unspecified | n.a. | Ratio IC50/EC50 | = | 735.0 | n.a. | PMID[9599250] |
| NPT2 | Others | Unspecified | n.a. | Ratio IC50/EC50 | = | 84.0 | n.a. | PMID[9599250] |
| NPT2 | Others | Unspecified | n.a. | IC50 | > | 100000.0 | nM | PMID[20159656] |
| Target ID | Target Type | Target Name | Target Organism | Activity Type | Activity Relation | Value | Unit | Reference |
|---|---|---|---|---|---|---|---|---|
| NPT32 | Organism | Mus musculus | Mus musculus | Inhibition | = | 46.1 | % | PMID[20159656] |
| NPT32 | Organism | Mus musculus | Mus musculus | Inhibition | = | 70.9 | % | PMID[20159656] |
| NPT32 | Organism | Mus musculus | Mus musculus | Inhibition | = | 40.2 | % | PMID[20159656] |
| NPT32 | Organism | Mus musculus | Mus musculus | Inhibition | = | 58.7 | % | PMID[20159656] |
Experimental ADME
| Experiment Model | Experiment Tissue | ADME Type | ADME Relation | ADME Value | ADME Unit | Reference |
|---|
Experimental Toxicity
| Experiment Model | Experiment Organism | Toxicity Type | Toxicity Relation | Toxicity Value | Toxicity Unit | Reference |
|---|
Common Abbreviations:
LC: Lethal Concentration; LD: Lethal Dose; LT:Lethal Time; NOAEL: No-observed-adverse-effect Level; BMDL: Benchmark Dose Lower Confidence Limit; BMD: Benchmark Dose; BMC:Benchmark Concentration; LOAEL: Lowest Observed Adverse Effect Level; RfD:Reference Dose; RfC:Reference Concentration; MRL: Minimal Risk Level; MEG: Maximum Exposure Guideline; PAC: Protective Action Criteria
| Hepatotoxicity | Carcinogenicity | Mutagenicity | Cardiotoxicity | Respiratory Toxicity | Eye Irritation | Endocrine Disruption |
|---|---|---|---|---|---|---|
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Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP toxicity records from domain-specific databases. These databases include:
☉ ToxValDB: a curated database that compiles quantitative toxicity values for chemicals from diverse public sources to support toxicological research and risk assessment.
☉ TOXRIC: a comprehensive, free-to-access, online database providing toxicological/feature data. The toxicity labels are retrieved from this database. [PMID: 36400569]
  Chemically structural similarityTop-200 similar NPs were calculated against the active-NP-set (includes approximately 50,000 NPs with experimentally-derived bioactivity available in NPASS)
Similarity is measured using the Tanimoto coefficient (Tc) , which compares the binary fingerprints of two molecules. Tc is calculated as the intersection divided by the union of '1' bits in the fingerprints, ranging from 0 to 1, with 1 indicating highest similarity.
●  The left chart: Distribution of similarity level between NPC64141 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.5 or Top200).
| Similarity Score | Similarity Level | Natural Product ID |
|---|---|---|
| 0.8667 | High Similarity | NPC205195 |
| 0.84 | Intermediate Similarity | NPC235294 |
| 0.7738 | Intermediate Similarity | NPC476397 |
| 0.7671 | Intermediate Similarity | NPC287597 |
| 0.7529 | Intermediate Similarity | NPC600370 |
| 0.7143 | Intermediate Similarity | NPC476383 |
| 0.7143 | Intermediate Similarity | NPC611289 |
| 0.7024 | Intermediate Similarity | NPC76406 |
| 0.7013 | Intermediate Similarity | NPC34293 |
| 0.6829 | Remote Similarity | NPC81515 |
| 0.6813 | Remote Similarity | NPC141455 |
| 0.6786 | Remote Similarity | NPC472350 |
| 0.6786 | Remote Similarity | NPC197316 |
| 0.6786 | Remote Similarity | NPC89105 |
| 0.6632 | Remote Similarity | NPC476398 |
| 0.6629 | Remote Similarity | NPC205864 |
| 0.6629 | Remote Similarity | NPC298257 |
| 0.6629 | Remote Similarity | NPC247032 |
| 0.6629 | Remote Similarity | NPC175214 |
| 0.6383 | Remote Similarity | NPC106818 |
| 0.6344 | Remote Similarity | NPC300894 |
| 0.6344 | Remote Similarity | NPC23845 |
| 0.6333 | Remote Similarity | NPC269141 |
| 0.6322 | Remote Similarity | NPC68092 |
| 0.6282 | Remote Similarity | NPC288416 |
| 0.6122 | Remote Similarity | NPC87403 |
| 0.6111 | Remote Similarity | NPC47471 |
| 0.5949 | Remote Similarity | NPC470572 |
| 0.5914 | Remote Similarity | NPC252292 |
| 0.5909 | Remote Similarity | NPC483706 |
| 0.5889 | Remote Similarity | NPC265648 |
| 0.5882 | Remote Similarity | NPC188393 |
| 0.5876 | Remote Similarity | NPC476384 |
| 0.5851 | Remote Similarity | NPC112 |
| 0.5789 | Remote Similarity | NPC100998 |
| 0.5682 | Remote Similarity | NPC260425 |
| 0.5667 | Remote Similarity | NPC483705 |
| 0.5657 | Remote Similarity | NPC196063 |
| 0.5657 | Remote Similarity | NPC604195 |
| 0.5618 | Remote Similarity | NPC46137 |
| 0.561 | Remote Similarity | NPC229784 |
| 0.5595 | Remote Similarity | NPC35731 |
| 0.557 | Remote Similarity | NPC84789 |
| 0.5567 | Remote Similarity | NPC610636 |
| 0.5556 | Remote Similarity | NPC321638 |
| 0.5542 | Remote Similarity | NPC886 |
| 0.5521 | Remote Similarity | NPC119537 |
| 0.5506 | Remote Similarity | NPC220942 |
| 0.549 | Remote Similarity | NPC64195 |
| 0.5465 | Remote Similarity | NPC219677 |
| 0.5446 | Remote Similarity | NPC476380 |
| 0.5446 | Remote Similarity | NPC476381 |
| 0.5408 | Remote Similarity | NPC96795 |
| 0.5408 | Remote Similarity | NPC264632 |
| 0.5354 | Remote Similarity | NPC259347 |
| 0.5352 | Remote Similarity | NPC147654 |
| 0.5263 | Remote Similarity | NPC263829 |
| 0.5248 | Remote Similarity | NPC476375 |
| 0.5189 | Remote Similarity | NPC229505 |
| 0.5172 | Remote Similarity | NPC55608 |
| 0.5158 | Remote Similarity | NPC476377 |
| 0.5155 | Remote Similarity | NPC34587 |
| 0.5152 | Remote Similarity | NPC34927 |
| 0.5096 | Remote Similarity | NPC470933 |
| 0.5093 | Remote Similarity | NPC476386 |
| 0.5063 | Remote Similarity | NPC476873 |
| 0.5059 | Remote Similarity | NPC477293 |
| 0.5057 | Remote Similarity | NPC157898 |
| 0.5051 | Remote Similarity | NPC296954 |
Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.
●  The left chart: Distribution of similarity level between NPC64141 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.5 or Top200).
| Similarity Score | Similarity Level | Drug ID | Developmental Stage |
|---|---|---|---|
| 0.6786 | Remote Similarity | NPD7266 | Phase 2 |
  Bioactivity similaritySimilarity level is defined by Bioactivity similarity was calculated based on bioactivity descriptors of compounds. The bioactivity descriptors were calculated by a recently developed AI algorithm Chemical Checker (CC) [Nature Biotechnology, 38:1087–1096, 2020; Nature Communications, 12:3932, 2021], which evaluated bioactivity similarities at five levels:
☉ A: chemistry similarity;
☉ B: biological targets similarity;
☉ C: networks similarity;
☉ D: cell-based bioactivity similarity;
☉ E: similarity based on clinical data.
Those 5 categories of CC bioactivity descriptors were calculated and then subjected to manifold projection using UMAP algorithm, to project all NPs on a 2-Dimensional space. The current NP was highlighted with a small circle in the 2-D map. Below figures: left-to-right, A-to-E.
