Natural Product: NPC64141

Natural Product IDNPC64141
Common Name
?
The InCHIKey will be temporarily assigned as the "Common Name" if no IUPAC name or alternative short name is available.
Isoacteoside
IUPAC Name [(2R,3R,4S,5R,6R)-6-[2-(3,4-dihydroxyphenyl)ethoxy]-3,5-dihydroxy-4-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]methyl (E)-3-(3,4-dihydroxyphenyl)prop-2-enoate
Synonyms Isoacetoside; Isoacteoside; Isoverbascoside
Synthetic Gene Cluster n.a.
ChEMBL Identifier CHEMBL504873
PubChem CID 6476333
Chemical Classification
  • CHEMONTID:0000000 [Organic compounds]
    • [CHEMONTID:0000261] Phenylpropanoids and polyketides
      • [CHEMONTID:0000476] Cinnamic acids and derivatives
        • [CHEMONTID:0001391] Hydroxycinnamic acids and derivatives
          • [CHEMONTID:0000059] Coumaric acids and derivatives

The Chemical Classification was calculated by Classyfire, a software for chemical taxonomy calculation. Reference: DOI:10.1186/s13321-016-0174-y.

  Chemical Representations

Standard InCHIKey FNMHEHXNBNCPCI-QEOJJFGVSA-N
Standard InCHI InChI=1S/C29H36O15/c1-13-22(35)24(37)25(38)29(42-13)44-27-23(36)20(12-41-21(34)7-4-14-2-5-16(30)18(32)10-14)43-28(26(27)39)40-9-8-15-3-6-17(31)19(33)11-15/h2-7,10-11,13,20,22-33,35-39H,8-9,12H2,1H3/b7-4+/t13-,20+,22-,23+,24+,25+,26+,27-,28+,29-/m0/s1
SMILES O=C(OC[C@H]1O[C@@H](OCCc2ccc(c(c2)O)O)[C@@H]([C@H]([C@@H]1O)O[C@@H]1O[C@@H](C)[C@@H]([C@H]([C@H]1O)O)O)O)/C=C/c1ccc(c(c1)O)O

  Calculated Properties

Physi-Chem Properties

Molecular Weight:   624.21 Volume:   586.676
?
Van der Waals volume.
Dense:   1.064 LogP:   1.049
?
The logarithm of the n-octanol/water distribution coefficients.
logD7.4:   1.588
?
The logarithm of the n-octanol/water distribution coefficient at pH=7.4.
LogS:   -2.167
?
The logarithm of aqueous solubility value.
Rotatable Bonds:   11.0 Rigid Bonds:   26.0
TPSA:   245.29
?
Topological Polar Surface Area.
H-Bond Acceptor:   15.0
H-Bond Donor:   9.0 Rings:   4.0
Heavy Atoms:   15.0

MedChem Properties

QED Drug-Likeness Score:   0.087 GASA:   1.0
?
GASA represents the probability of being difficult to synthesize, ranging from 0 to 1.
Synthetic Accessibility Score:   4.708 Fsp3:   0.483
MCE-18:   100.488
?
MCE-18 stands for medicinal chemistry evolution.MCE-18≥45 is considered a suitable value.
Lipinski Rule-of-5:   Accepted
Pfizer Rule:   Rejected GSK Rule:   Accepted
Golden Triangle Rule:   Accepted BMS Rule:   0
Chelating Alert:   1 PAINS Alert:   1
Colloidal aggregators:   0.667 Fluc inhibitor:   0.693
?
The fluc inhibitor value is the probability of being fLuc inhibitors, within the range of 0 to 1.
Blue fluorescence:   0.111
?
The blue fluorescence value is the probability of being blue fluorescence, within the range of 0 to 1
Green fluorescence:   0.6
?
The green fluorescence value is the probability of being green fluorescence, within the range of 0 to 1
Reactive compounds:   0.173 Promiscuous compounds:   0.432

ADMET Properties (ADMETlab3.0)

ADMET: Absorption

Caco-2 Permeability:   -6.53 MDCK Permeability:   -5.206
Pgp-inhibitor:   0.0 Pgp-substrate:   0.022
PAMPA:   0.996
?
The experimental data for Peff was logarithmically transformed (logPeff). Molecules with log Peff values below 2.0 were classified as low-permeability (Category 0), while those with log Peff values exceeding 2.5 were classified as high-permeability (Category 1).
Human Intestinal Absorption (HIA):   0.958
20% Bioavailability (F20%):   0.999 30% Bioavailability (F30%):   1.0
50% Bioavailability (F50%):   1.0

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB):   0.003 MRP1:   0.006
Plasma Protein Binding (PPB):   72.138% Volume Distribution (VD):   -0.41
Fu: 23.829%
?
The fraction unbound in plasms.
OATP1B1 inhibitor:   1.0
OATP1B3 inhibitor:   1.0 BCRP inhibitor:   0.006
BSEP inhibitor:   0.002

ADMET: Metabolism

CYP1A2-inhibitor:   0.0 CYP1A2-substrate:   0.0
CYP2C19-inhibitor:   0.0 CYP2C19-substrate:   0.008
CYP2C9-inhibitor:   0.0 CYP2C9-substrate:   0.0
CYP2D6-inhibitor:   0.0 CYP2D6-substrate:   0.759
CYP3A4-inhibitor:   0.0 CYP3A4-substrate:   0.997
CYP2B6-substrate:   0.0 CYP2C8-inhibitor:   1.0
HLM stability:   0.998
?
Human liver microsomal (HLM) stability. Category 0: stable+ (HLM > 30 min); Category 1: unstable- (HLM ≤ 30 min). The output value is the probability of human liver microsomal instability, where a value closer to 1 indicates a higher likelihood of instability.

ADMET: Excretion

Clearance (CL):  3.107 Half-life (T1/2):  4.511

ADMET: Toxicity

hERG Blockers:  0.052 hERG Blockers (10um):  0.581
Human Hepatotoxicity (H-HT):  0.285 Drug-induced Liver Injury (DILI):  0.892
AMES Toxicity:  0.935 Rat Oral Acute Toxicity:  0.01
Maximum Recommended Daily Dose:  0.081 Skin Sensitization:  1.0
Carcinogencity:  0.029 Eye Corrosion:  0.0
Eye Irritation:  0.088 Respiratory Toxicity:  0.003
Drug-induced Neurotoxicity:  0.0 Ototoxicity:  0.996
Hematotoxicity:  0.051 Drug-induced Nephrotoxicity:  0.248
Genotoxicity:  0.73 RPMI-8226 Immunitoxicity:  0.031
A549 Cytotoxicity:  0.983 Hek293 Cytotoxicity:  0.603
BCF:   0.688
?
Bioconcentration factors are used for considering secondary poisoning potential and assessing risks to human health via the food chain. The unit is -log10[(mg/L)/(1000*MW)].
IGC50:   3.394
?
48 hour Tetrahymena pyriformis IGC50. The unit of IGC50 is -log10[(mg/L)/(1000*MW)].
LC50DM:   4.956
?
48 hour Daphnia magna LC50. The unit of LC50DM is -log10[(mg/L)/(1000*MW)].
LC50FM:   4.453
?
96 hour fathead minnow LC50. The unit of LC50FM is -log10[(mg/L)/(1000*MW)].

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO12110 Bauhinia tarapotensis Species Fabaceae Eukaryota n.a. n.a. n.a. PMID[11473417]
NPO10031 Euphorbia antiquorum Species Euphorbiaceae Eukaryota n.a. n.a. n.a. PMID[11858748]
NPO29463 Pogostemon cablin Species Lamiaceae Eukaryota n.a. leaf n.a. PMID[12575075]
NPO29463 Pogostemon cablin Species Lamiaceae Eukaryota n.a. stem n.a. PMID[12575075]
NPO16076 Penicillium chrysogenum Species Aspergillaceae Eukaryota n.a. n.a. n.a. PMID[1367520]
NPO14242 Maytenus laevis Species Celastraceae Eukaryota bark Leticia, Colombia n.a. PMID[15568791]
NPO29463 Pogostemon cablin Species Lamiaceae Eukaryota n.a. whole plant n.a. PMID[15577255]
NPO21591 Psorothamnus polydenius Species Fabaceae Eukaryota n.a. n.a. n.a. PMID[15679330]
NPO21591 Psorothamnus polydenius Species Fabaceae Eukaryota n.a. leaf n.a. PMID[15679330]
NPO21591 Psorothamnus polydenius Species Fabaceae Eukaryota n.a. twig n.a. PMID[15679330]
NPO21591 Psorothamnus polydenius Species Fabaceae Eukaryota n.a. flower n.a. PMID[15679330]
NPO16076 Penicillium chrysogenum Species Aspergillaceae Eukaryota n.a. n.a. n.a. PMID[15974609]
NPO1939 Swartzia langsdorffii Species Fabaceae Eukaryota n.a. n.a. n.a. PMID[16124782]
NPO5912 Globularia alypum Species Plantaginaceae Eukaryota n.a. aerial part n.a. PMID[16124783]
NPO5912 Globularia alypum Species Plantaginaceae Eukaryota aerial parts Morocco n.a. PMID[16124783]
NPO13010 Allium stipitatum Species Amaryllidaceae Eukaryota n.a. n.a. n.a. PMID[19093848]
NPO13010 Allium stipitatum Species Amaryllidaceae Eukaryota n.a. bulb n.a. PMID[19093848]
NPO982 Phlomis brunneogaleata Species Lamiaceae Eukaryota n.a. n.a. n.a. PMID[19299148]
NPO28152 Jacaranda caucana Species Bignoniaceae Eukaryota n.a. n.a. n.a. PMID[19361168]
NPO6964 Cistanche tubulosa Species Orobanchaceae Eukaryota fresh stems n.a. n.a. PMID[20159656]
NPO21509 Laurencia similis Species Rhodomelaceae Eukaryota n.a. n.a. n.a. PMID[20961755]
NPO16076 Penicillium chrysogenum Species Aspergillaceae Eukaryota n.a. mycelium n.a. PMID[21381678]
NPO25682 Acorus calamus Species Acoraceae Eukaryota n.a. rhizome n.a. PMID[21563811]
NPO16076 Penicillium chrysogenum Species Aspergillaceae Eukaryota n.a. n.a. n.a. PMID[21667925]
NPO16076 Penicillium chrysogenum Species Aspergillaceae Eukaryota n.a. n.a. n.a. PMID[22118684]
NPO20240 Discodermia calyx Species Theonellidae Eukaryota n.a. n.a. n.a. PMID[22276742]
NPO25682 Acorus calamus Species Acoraceae Eukaryota rhizomes n.a. n.a. PMID[22671987]
NPO8101 Rehmannia glutinosa Species Orobanchaceae Eukaryota Roots n.a. n.a. PMID[22916954]
NPO25682 Acorus calamus Species Acoraceae Eukaryota n.a. n.a. n.a. PMID[23373216]
NPO40812 Castilleja linariaefolia Species n.a. n.a. n.a. n.a. n.a. PMID[2380718]
NPO27031 Methanosarcina barkeri Species Methanosarcinaceae Archaea n.a. n.a. n.a. PMID[24669201]
NPO10031 Euphorbia antiquorum Species Euphorbiaceae Eukaryota n.a. n.a. n.a. PMID[24840014]
NPO3477 Plantago asiatica Species Plantaginaceae Eukaryota n.a. n.a. n.a. PMID[2488968]
NPO10680 Cistanche deserticola Species Orobanchaceae Eukaryota n.a. n.a. n.a. PMID[25900014]
NPO3477 Plantago asiatica Species Plantaginaceae Eukaryota n.a. seed n.a. PMID[2610694]
NPO13153 Callicarpa macrophylla Species Lamiaceae Eukaryota Leaves n.a. n.a. PMID[26110519]
NPO8918 Plantago depressa Species Plantaginaceae Eukaryota n.a. n.a. n.a. PMID[26562611]
NPO16076 Penicillium chrysogenum Species Aspergillaceae Eukaryota n.a. n.a. n.a. PMID[26692349]
NPO20240 Discodermia calyx Species Theonellidae Eukaryota n.a. n.a. n.a. PMID[28290701]
NPO29463 Pogostemon cablin Species Lamiaceae Eukaryota n.a. n.a. n.a. PMID[30188125]
NPO40190 Lippia rubella Species Verbenaceae Eukaryota n.a. n.a. n.a. PMID[30817148]
NPO10031 Euphorbia antiquorum Species Euphorbiaceae Eukaryota Stems n.a. n.a. PMID[31180680]
NPO16076 Penicillium chrysogenum Species Aspergillaceae Eukaryota n.a. n.a. n.a. PMID[33089690]
NPO25682 Acorus calamus Species Acoraceae Eukaryota n.a. n.a. n.a. PMID[35872238]
NPO48361 Clerodendrum glandulosum Species Lamiaceae Eukaryota n.a. n.a. n.a. PMID[39621736]
NPO16076 Penicillium chrysogenum Species Aspergillaceae Eukaryota n.a. n.a. n.a. PMID[8626236]
NPO6610 Markhamia lutea Species Bignoniaceae Eukaryota n.a. n.a. n.a. PMID[9599250]
NPO13153 Callicarpa macrophylla Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO5995 Spartium junceum Species Fabaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO12103 Salvia ballotiflora Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO14327 Scabiosa comosa Species Caprifoliaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO10031 Euphorbia antiquorum Species Euphorbiaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO29463 Pogostemon cablin Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO4129 Veronica persica Species Plantaginaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO3734 Vigna umbellata Species Fabaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO10680 Cistanche deserticola Species Orobanchaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO6964 Cistanche tubulosa Species Orobanchaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO16365 Ageratum tomentosum Species Asteraceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO25682 Acorus calamus Species Acoraceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO8101 Rehmannia glutinosa Species Orobanchaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO22203 Tapinella panuoides Species Tapinellaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO15404 Streptomyces erythrochromogenes Species Streptomycetaceae Bacteria n.a. n.a. n.a. Database[COCONUT]
NPO15898 Streptomyces noursei Species Streptomycetaceae Bacteria n.a. n.a. n.a. Database[COCONUT]
NPO19048 Pinellia ternata Species Araceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO28152 Jacaranda caucana Species Bignoniaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO15108 Angiopteris evecta Species Marattiaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO14454 Plectranthus lanuginosus Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO3477 Plantago asiatica Species Plantaginaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO13914 Fraxinus ornus Species Oleaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO21591 Psorothamnus polydenius Species Fabaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO27031 Methanosarcina barkeri Species Methanosarcinaceae Archaea n.a. n.a. n.a. Database[COCONUT]
NPO20856 Pyrethrum santolinoides n.a. n.a. n.a. n.a. n.a. n.a. Database[COCONUT]
NPO8918 Plantago depressa Species Plantaginaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO21509 Laurencia similis Species Rhodomelaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO5565 Harpagophytum procumbens Species Pedaliaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO6610 Markhamia lutea Species Bignoniaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO23170 Orobanche coerulescens Species Orobanchaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO982 Phlomis brunneogaleata Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO14965 Lepidophorum repandum Species Asteraceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO15621 Lethasterias fusca Species Asteriidae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO14242 Maytenus laevis Species Celastraceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO11584 Artemisia argentea Species Asteraceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO12480 Brodiaea californica Species Asparagaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO9917 Plagiomnium cuspidatum Species Mniaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO28240 Notholaena lemmonii Species Pteridaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO12110 Bauhinia tarapotensis Species Fabaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO5912 Globularia alypum Species Plantaginaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO20240 Discodermia calyx Species Theonellidae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO14614 Kopsia longiflora Species Apocynaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO17830 Adonis aleppica Species Ranunculaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO5137 Myristica malabarica Species Myristicaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO4838 Phlomis umbrosa Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO13743 Populus yunnanensis Species Salicaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO15087 Alstonia pittieri Species Apocynaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO16161 Stephania aculeata Species Menispermaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO12777 Laurencia pacifica Species Rhodomelaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO1124 Scapania aequiloba Species Scapaniaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO4039 Verbascum pseudonobile Species Scrophulariaceae Eukaryota n.a. n.a. n.a. Database[COCONUT]
NPO8101 Rehmannia glutinosa Species Orobanchaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO6964 Cistanche tubulosa Species Orobanchaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO3477 Plantago asiatica Species Plantaginaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO982 Phlomis brunneogaleata Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO10680 Cistanche deserticola Species Orobanchaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO5995 Spartium junceum Species Fabaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO4129 Veronica persica Species Plantaginaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO14327 Scabiosa comosa Species Caprifoliaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO23170 Orobanche coerulescens Species Orobanchaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO10031 Euphorbia antiquorum Species Euphorbiaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO19048 Pinellia ternata Species Araceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO8918 Plantago depressa Species Plantaginaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO29463 Pogostemon cablin Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO25682 Acorus calamus Species Acoraceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO13914 Fraxinus ornus Species Oleaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO18558 Abies alba Species Pinaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO5565 Harpagophytum procumbens Species Pedaliaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO151 Pedicularis striata Species Orobanchaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO4838 Phlomis umbrosa Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO20106 Polygala sabulosa Species Polygalaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO30076 Lippia dulcis Species Verbenaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO5137 Myristica malabarica Species Myristicaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO14614 Kopsia longiflora Species Apocynaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO8101 Rehmannia glutinosa Species Orobanchaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO18558 Abies alba Species Pinaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO10680 Cistanche deserticola Species Orobanchaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO29463 Pogostemon cablin Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO18120 Radix rehmanniae Species Lymnaeidae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO982 Phlomis brunneogaleata Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO13914 Fraxinus ornus Species Oleaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO25682 Acorus calamus Species Acoraceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO10031 Euphorbia antiquorum Species Euphorbiaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO4129 Veronica persica Species Plantaginaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO8918 Plantago depressa Species Plantaginaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO3477 Plantago asiatica Species Plantaginaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO4203 Phlomoides rotata Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO14614 Kopsia longiflora Species Apocynaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO19048 Pinellia ternata Species Araceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO23388 Phyla dulcis Species Verbenaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO14327 Scabiosa comosa Species Caprifoliaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO5565 Harpagophytum procumbens Species Pedaliaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO5995 Spartium junceum Species Fabaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO6964 Cistanche tubulosa Species Orobanchaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO23170 Orobanche coerulescens Species Orobanchaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO77 Brandisia hancei Species Orobanchaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO151 Pedicularis striata Species Orobanchaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO13153 Callicarpa macrophylla Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO4838 Phlomis umbrosa Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO20106 Polygala sabulosa Species Polygalaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO5137 Myristica malabarica Species Myristicaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO9917 Plagiomnium cuspidatum Species Mniaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO18116 Dregea volubilis Species Apocynaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO29463 Pogostemon cablin Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO3477 Plantago asiatica Species Plantaginaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO23170 Orobanche coerulescens Species Orobanchaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO8101 Rehmannia glutinosa Species Orobanchaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO19048 Pinellia ternata Species Araceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO14327 Scabiosa comosa Species Caprifoliaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO13914 Fraxinus ornus Species Oleaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO10680 Cistanche deserticola Species Orobanchaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO8918 Plantago depressa Species Plantaginaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO5995 Spartium junceum Species Fabaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO25682 Acorus calamus Species Acoraceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO4838 Phlomis umbrosa Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO3477 Plantago asiatica Species Plantaginaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO19048 Pinellia ternata Species Araceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO8101 Rehmannia glutinosa Species Orobanchaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO29463 Pogostemon cablin Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO4203 Phlomoides rotata Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO10680 Cistanche deserticola Species Orobanchaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO8918 Plantago depressa Species Plantaginaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO23170 Orobanche coerulescens Species Orobanchaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO3734 Vigna umbellata Species Fabaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO5565 Harpagophytum procumbens Species Pedaliaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO6964 Cistanche tubulosa Species Orobanchaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO13153 Callicarpa macrophylla Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO13477 Cyberlindnera jadinii Species Phaffomycetaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO22203 Tapinella panuoides Species Tapinellaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO151 Pedicularis striata Species Orobanchaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO13225 Spergula japonica Species Caryophyllaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO255 Solanum pseudopersicum Species Solanaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO16161 Stephania aculeata Species Menispermaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO15087 Alstonia pittieri Species Apocynaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO28240 Notholaena lemmonii Species Pteridaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO13010 Allium stipitatum Species Amaryllidaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO10031 Euphorbia antiquorum Species Euphorbiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO14614 Kopsia longiflora Species Apocynaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO14454 Plectranthus lanuginosus Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO11584 Artemisia argentea Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO2667 Acacia lasiopetala Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO27134 Euphrasia rubra Species Orobanchaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO8918 Plantago depressa Species Plantaginaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO8556 Eucalyptus kitsoniana Species Myrtaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO5995 Spartium junceum Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO10527 Cyathula tomentosa Species Amaranthaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26381 Bombus pascuorum Species Apidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO15513 Pseudocyphellaria rubella Species Lobariaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO15806 Rhododendron campylocarpum Species Ericaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO3477 Plantago asiatica Species Plantaginaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO1777 Toddalia aculeata Species Rutaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO9299.3 Hordeum vulgare var. distichon Varieties Poaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO8142 Pinus pumilio Species Pinaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO15718 Lindera sericea Species Tineidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO1124 Scapania aequiloba Species Scapaniaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO5137 Myristica malabarica Species Myristicaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO15108 Angiopteris evecta Species Marattiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO8101 Rehmannia glutinosa Species Orobanchaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO13460 Asphodeline damascena Species Asphodelaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO16076 Penicillium chrysogenum Species Aspergillaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO9917 Plagiomnium cuspidatum Species Mniaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO27031 Methanosarcina barkeri Species Methanosarcinaceae Archaea n.a. n.a. n.a. Database[UNPD]
NPO10680 Cistanche deserticola Species Orobanchaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO15898 Streptomyces noursei Species Streptomycetaceae Bacteria n.a. n.a. n.a. Database[UNPD]
NPO22101 Himantoglossum hircinum Species Orchidaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO15404 Streptomyces erythrochromogenes Species Streptomycetaceae Bacteria n.a. n.a. n.a. Database[UNPD]
NPO25577 Samuela carnerosana n.a. n.a. n.a. n.a. n.a. n.a. Database[UNPD]
NPO26951 Gymnopus androsaceus Species Omphalotaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO13743 Populus yunnanensis Species Salicaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18116 Dregea volubilis Species Apocynaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20106 Polygala sabulosa Species Polygalaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO16786 Fagus pumilio Species Fagaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO12110 Bauhinia tarapotensis Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO5912 Globularia alypum Species Plantaginaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO11243 Exochorda giraldii Species Rosaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO1939 Swartzia langsdorffii Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO14327 Scabiosa comosa Species Caprifoliaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO12777 Laurencia pacifica Species Rhodomelaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19048 Pinellia ternata Species Araceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO15817 Alternaria scirpicola Species Pleosporaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO12480 Brodiaea californica Species Asparagaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO4129 Veronica persica Species Plantaginaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO21851 Chaetomella raphigera Species Chaetomellaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO14965 Lepidophorum repandum Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20240 Discodermia calyx Species Theonellidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO17830 Adonis aleppica Species Ranunculaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18558 Abies alba Species Pinaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO29322 Rhodanthe maryonii Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO77 Brandisia hancei Species Orobanchaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO6610 Markhamia lutea Species Bignoniaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO4039 Verbascum pseudonobile Species Scrophulariaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO15621 Lethasterias fusca Species Asteriidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO982 Phlomis brunneogaleata Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO28152 Jacaranda caucana Species Bignoniaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO13153 Callicarpa macrophylla Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO3734 Vigna umbellata Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO6964 Cistanche tubulosa Species Orobanchaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO14003 Crotalaria lachnosema Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO8446 Alnus mandshurica Species Betulaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO1009 Stentor coeruleus Species Stentoridae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO13914 Fraxinus ornus Species Oleaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO4203 Phlomoides rotata Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO3828 Cereus pachanoi Species Sagartiidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO23170 Orobanche coerulescens Species Orobanchaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO23388 Phyla dulcis Species Verbenaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO29463 Pogostemon cablin Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20437 Chrysothamnus stylosus Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO21509 Laurencia similis Species Rhodomelaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20303 Artemisia kulbadica Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO12103 Salvia ballotiflora Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO21591 Psorothamnus polydenius Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25682 Acorus calamus Species Acoraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO16365 Ageratum tomentosum Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO14242 Maytenus laevis Species Celastraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO12751 Ajuga japonica Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO4838 Phlomis umbrosa Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20856 Pyrethrum santolinoides n.a. n.a. n.a. n.a. n.a. n.a. Database[UNPD]

Note for Reference:
In addition to directly collecting NP source organism data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated them from below databases:
UNPD: Universal Natural Products Database [PMID: 23638153].
StreptomeDB: a database of streptomycetes natural products [PMID: 33051671].
TM-MC: a database of medicinal materials and chemical compounds in Northeast Asian traditional medicine [PMID: 26156871].
TCM@Taiwan: a Traditional Chinese Medicine database [PMID: 21253603].
TCMID: a Traditional Chinese Medicine database [PMID: 29106634].
TCMSP: The traditional Chinese medicine systems pharmacology database and analysis platform [PMID: 24735618].
HerDing: a herb recommendation system to treat diseases using genes and chemicals [PMID: 26980517].
MetaboLights: a metabolomics database [PMID: 27010336].
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].



  NP Quantity Composition/Concentration

Organism ID Organism Name Organism Material Preparation Organism Part NP Quantity (Standard) NP Quantity (Minimum) NP Quantity (Maximum) Quantity Unit Reference
NPO48361 Clerodendrum glandulosum n.a. Leaves 3.71±0.33 n.a. n.a. mg/g PMID[39621736]
NPO48361 Clerodendrum glandulosum n.a. Leaves 5.19±0.20 n.a. n.a. mg/g PMID[39621736]
NPO48361 Clerodendrum glandulosum n.a. Leaves 78.10±0.17 n.a. n.a. mg/g PMID[39621736]
NPO48361 Clerodendrum glandulosum n.a. Leaves 29.81±0.67 n.a. n.a. mg/g PMID[39621736]

Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP quantitative records for specific NP domains (e.g., NPS from foods or herbs) from domain-specific databases. These databases include:
DUKE: Dr. Duke's Phytochemical and Ethnobotanical Databases.
PHENOL EXPLORER: is the first comprehensive database on polyphenol content in foods [PMID: 24103452], its homepage can be accessed at here.
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].



 Biological Activity

Molecular-level activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT280 Individual protein Matrix metalloproteinase 9 Homo sapiens IC50 = 14280.0 nM PMID[22658537]
NPT1089 Individual protein Matrix metalloproteinase 12 Homo sapiens IC50 = 8220.0 nM PMID[22658537]
NPT1090 Individual protein Matrix metalloproteinase 13 Homo sapiens IC50 = 11090.0 nM PMID[22658537]
NPT280 Individual protein Matrix metalloproteinase 9 Homo sapiens Inhibition > 30.0 % PMID[22658537]
NPT1089 Individual protein Matrix metalloproteinase 12 Homo sapiens Inhibition > 30.0 % PMID[22658537]
NPT1090 Individual protein Matrix metalloproteinase 13 Homo sapiens Inhibition > 30.0 % PMID[22658537]
NPT567 Individual protein Matrix metalloproteinase 3 Homo sapiens IC50 = 91410.0 nM PMID[22658537]
NPT567 Individual protein Matrix metalloproteinase 3 Homo sapiens Inhibition > 30.0 % PMID[22658537]
NPT568 Individual protein Matrix metalloproteinase-2 Homo sapiens IC50 = 8960.0 nM PMID[22658537]
NPT568 Individual protein Matrix metalloproteinase-2 Homo sapiens Inhibition > 30.0 % PMID[22658537]

In vitro activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT168 Cell line P388 Mus musculus ED50 = 10.0 ug ml-1 PMID[2380718]
NPT927 Cell line PBMC Homo sapiens Activity = 101.5 pg/ml PMID[15568791]
NPT927 Cell line PBMC Homo sapiens Activity = 175.5 pg/ml PMID[15568791]
NPT927 Cell line PBMC Homo sapiens Activity < 7.8 pg/ml PMID[15568791]
NPT993 Cell line Hepatocyte Mus musculus Inhibition = 43.7 % PMID[20159656]
NPT993 Cell line Hepatocyte Mus musculus Inhibition = 57.3 % PMID[20159656]
NPT993 Cell line Hepatocyte Mus musculus Inhibition = 101.2 % PMID[20159656]
NPT993 Cell line Hepatocyte Mus musculus IC50 = 5300.0 nM PMID[20159656]
NPT1460 Cell line L929 Mus musculus Inhibition = -4.6 % PMID[20159656]
NPT1460 Cell line L929 Mus musculus Inhibition = 19.0 % PMID[20159656]
NPT1460 Cell line L929 Mus musculus Inhibition = 61.9 % PMID[20159656]
NPT1460 Cell line L929 Mus musculus Inhibition = 102.4 % PMID[20159656]
NPT1460 Cell line L929 Mus musculus IC50 = 22.7 ug.mL-1 PMID[20159656]
NPT70 Organism Respiratory syncytial virus Respiratory syncytial virus EC50 = 0.17 ug.mL-1 PMID[9599250]
NPT70 Organism Respiratory syncytial virus Respiratory syncytial virus EC50 = 1.1 ug.mL-1 PMID[9599250]
NPT70 Organism Respiratory syncytial virus Respiratory syncytial virus EC50 = 0.62 ug.mL-1 PMID[9599250]
NPT28833 No target No relevant target n.a. IC50 = 0.16 ug.mL-1 PMID[34999211]
NPT28833 No target No relevant target n.a. IC50 = 3.0 ug.mL-1 PMID[34999211]
NPT20529 Non-molecular NON-PROTEIN TARGET n.a. Activity = 1.228 n.a. PMID[11473417]
NPT20529 Non-molecular NON-PROTEIN TARGET n.a. Activity = 24.6 n.a. PMID[11473417]
NPT20529 Non-molecular NON-PROTEIN TARGET n.a. Activity = 7.2 n.a. PMID[11473417]
NPT20529 Non-molecular NON-PROTEIN TARGET n.a. EC50 = 1200.0 nM PMID[19361168]
NPT1 Others Radical scavenging activity n.a. IC50 = 1300.0 nM PMID[11473417]
NPT1 Others Radical scavenging activity n.a. IC50 = 20000.0 nM PMID[16124783]
NPT2 Others Unspecified n.a. Ratio IC50/EC50 = 735.0 n.a. PMID[9599250]
NPT2 Others Unspecified n.a. Ratio IC50/EC50 = 84.0 n.a. PMID[9599250]
NPT2 Others Unspecified n.a. IC50 > 100000.0 nM PMID[20159656]

In vivo activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT32 Organism Mus musculus Mus musculus Inhibition = 46.1 % PMID[20159656]
NPT32 Organism Mus musculus Mus musculus Inhibition = 70.9 % PMID[20159656]
NPT32 Organism Mus musculus Mus musculus Inhibition = 40.2 % PMID[20159656]
NPT32 Organism Mus musculus Mus musculus Inhibition = 58.7 % PMID[20159656]





 Experimental ADME

Experiment Model Experiment Tissue ADME Type ADME Relation ADME Value ADME Unit Reference





 Experimental Toxicity

Quantitative toxicity

Experiment Model Experiment Organism Toxicity Type Toxicity Relation Toxicity Value Toxicity Unit Reference

Common Abbreviations:
LC: Lethal Concentration; LD: Lethal Dose; LT:Lethal Time; NOAEL: No-observed-adverse-effect Level; BMDL: Benchmark Dose Lower Confidence Limit; BMD: Benchmark Dose; BMC:Benchmark Concentration; LOAEL: Lowest Observed Adverse Effect Level; RfD:Reference Dose; RfC:Reference Concentration; MRL: Minimal Risk Level; MEG: Maximum Exposure Guideline; PAC: Protective Action Criteria

Categorical toxicity labels

Hepatotoxicity Carcinogenicity Mutagenicity Cardiotoxicity Respiratory Toxicity Eye Irritation Endocrine Disruption
Hepatotoxicity Carcinogenicity Mutagenicity Cardiotoxicity Respiratory Toxicity Eye Irritation Endocrine Disruption

Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP toxicity records from domain-specific databases. These databases include:
ToxValDB: a curated database that compiles quantitative toxicity values for chemicals from diverse public sources to support toxicological research and risk assessment.
TOXRIC: a comprehensive, free-to-access, online database providing toxicological/feature data. The toxicity labels are retrieved from this database. [PMID: 36400569]


  Chemically structural similarity

Similar Active Natural Products in NPASS

Top-200 similar NPs were calculated against the active-NP-set (includes approximately 50,000 NPs with experimentally-derived bioactivity available in NPASS)

Similarity is measured using the Tanimoto coefficient (Tc) , which compares the binary fingerprints of two molecules. Tc is calculated as the intersection divided by the union of '1' bits in the fingerprints, ranging from 0 to 1, with 1 indicating highest similarity.

●  The left chart: Distribution of similarity level between NPC64141 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.5 or Top200).

Similarity Score Similarity Level Natural Product ID
0.8667 High Similarity NPC205195
0.84 Intermediate Similarity NPC235294
0.7738 Intermediate Similarity NPC476397
0.7671 Intermediate Similarity NPC287597
0.7529 Intermediate Similarity NPC600370
0.7143 Intermediate Similarity NPC476383
0.7143 Intermediate Similarity NPC611289
0.7024 Intermediate Similarity NPC76406
0.7013 Intermediate Similarity NPC34293
0.6829 Remote Similarity NPC81515
0.6813 Remote Similarity NPC141455
0.6786 Remote Similarity NPC472350
0.6786 Remote Similarity NPC197316
0.6786 Remote Similarity NPC89105
0.6632 Remote Similarity NPC476398
0.6629 Remote Similarity NPC205864
0.6629 Remote Similarity NPC298257
0.6629 Remote Similarity NPC247032
0.6629 Remote Similarity NPC175214
0.6383 Remote Similarity NPC106818
0.6344 Remote Similarity NPC300894
0.6344 Remote Similarity NPC23845
0.6333 Remote Similarity NPC269141
0.6322 Remote Similarity NPC68092
0.6282 Remote Similarity NPC288416
0.6122 Remote Similarity NPC87403
0.6111 Remote Similarity NPC47471
0.5949 Remote Similarity NPC470572
0.5914 Remote Similarity NPC252292
0.5909 Remote Similarity NPC483706
0.5889 Remote Similarity NPC265648
0.5882 Remote Similarity NPC188393
0.5876 Remote Similarity NPC476384
0.5851 Remote Similarity NPC112
0.5789 Remote Similarity NPC100998
0.5682 Remote Similarity NPC260425
0.5667 Remote Similarity NPC483705
0.5657 Remote Similarity NPC196063
0.5657 Remote Similarity NPC604195
0.5618 Remote Similarity NPC46137
0.561 Remote Similarity NPC229784
0.5595 Remote Similarity NPC35731
0.557 Remote Similarity NPC84789
0.5567 Remote Similarity NPC610636
0.5556 Remote Similarity NPC321638
0.5542 Remote Similarity NPC886
0.5521 Remote Similarity NPC119537
0.5506 Remote Similarity NPC220942
0.549 Remote Similarity NPC64195
0.5465 Remote Similarity NPC219677
0.5446 Remote Similarity NPC476380
0.5446 Remote Similarity NPC476381
0.5408 Remote Similarity NPC96795
0.5408 Remote Similarity NPC264632
0.5354 Remote Similarity NPC259347
0.5352 Remote Similarity NPC147654
0.5263 Remote Similarity NPC263829
0.5248 Remote Similarity NPC476375
0.5189 Remote Similarity NPC229505
0.5172 Remote Similarity NPC55608
0.5158 Remote Similarity NPC476377
0.5155 Remote Similarity NPC34587
0.5152 Remote Similarity NPC34927
0.5096 Remote Similarity NPC470933
0.5093 Remote Similarity NPC476386
0.5063 Remote Similarity NPC476873
0.5059 Remote Similarity NPC477293
0.5057 Remote Similarity NPC157898
0.5051 Remote Similarity NPC296954

Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC64141 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.5 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.6786 Remote Similarity NPD7266 Phase 2

Bioactivity similarity

  Bioactivity similarity

Similar Natural Products in NPASS

Similarity level is defined by Bioactivity similarity was calculated based on bioactivity descriptors of compounds. The bioactivity descriptors were calculated by a recently developed AI algorithm Chemical Checker (CC) [Nature Biotechnology, 38:1087–1096, 2020; Nature Communications, 12:3932, 2021], which evaluated bioactivity similarities at five levels:
A: chemistry similarity;
B: biological targets similarity;
C: networks similarity;
D: cell-based bioactivity similarity;
E: similarity based on clinical data.
Those 5 categories of CC bioactivity descriptors were calculated and then subjected to manifold projection using UMAP algorithm, to project all NPs on a 2-Dimensional space. The current NP was highlighted with a small circle in the 2-D map. Below figures: left-to-right, A-to-E.

A: chemistry similarity
B: biological targets similarity
C: networks similarity
D: cell-based bioactivity similarity
E: similarity based on clinical data