NPASS Compound

Natural Product: NPC481408

Natural Product ID	NPC481408
Common Name ? The InCHIKey will be temporarily assigned as the "Common Name" if no IUPAC name or alternative short name is available.	BYAKBFZIODGOGU-QXJYFGALSA-N
IUPAC Name	n.a.
Synonyms
Synthetic Gene Cluster	n.a.
ChEMBL Identifier	n.a.
PubChem CID	44584562
Chemical Classification	CHEMONTID:0000000 [Organic compounds] [CHEMONTID:0003297] Organic Polymers [CHEMONTID:0003298] Polypeptides

The Chemical Classification was calculated by Classyfire, a software for chemical taxonomy calculation. Reference: DOI:10.1186/s13321-016-0174-y.

Chemical Representations

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0.5210 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.6745 6.5428 -1.1653 H 0 0 0 0 0 0 0 0 0 0 0 0 -6.3929 6.0641 -0.9027 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.8943 9.7674 1.5782 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.6312 11.6888 0.7881 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.0346 11.2510 -0.9590 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.4202 11.6925 -0.3964 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.9835 12.0452 1.2861 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.1925 14.1690 -0.0023 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.4473 13.8824 0.5012 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.8848 13.1430 -1.7573 H 0 0 0 0 0 0 0 0 0 0 0 0 -3.6280 13.4116 -2.3139 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.3637 15.5535 -0.9149 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.7607 15.1656 -2.4873 H 0 0 0 0 0 0 0 0 0 0 0 0 0.5605 7.7280 -0.3684 H 0 0 0 0 0 0 0 0 0 0 0 0 0.2553 6.7606 2.5160 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.6659 6.0968 1.1214 H 0 0 0 0 0 0 0 0 0 0 0 0 2.5039 6.5744 -1.7910 H 0 0 0 0 0 0 0 0 0 0 0 0 2.6867 5.2008 -2.9022 H 0 0 0 0 0 0 0 0 0 0 0 0 4.7960 6.2263 -1.8565 H 0 0 0 0 0 0 0 0 0 0 0 0 4.1684 2.8110 0.5270 H 0 0 0 0 0 0 0 0 0 0 0 0 6.6970 3.4928 0.7498 H 0 0 0 0 0 0 0 0 0 0 0 0 5.9707 1.1705 0.7679 H 0 0 0 0 0 0 0 0 0 0 0 0 5.4085 1.3259 2.5036 H 0 0 0 0 0 0 0 0 0 0 0 0 7.2045 1.4493 2.0586 H 0 0 0 0 0 0 0 0 0 0 0 0 7.3839 4.1318 2.6265 H 0 0 0 0 0 0 0 0 0 0 0 0 1.1420 1.6440 2.1905 H 0 0 0 0 0 0 0 0 0 0 0 0 2.4415 0.6952 1.4163 H 0 0 0 0 0 0 0 0 0 0 0 0 1.1893 -1.5258 5.2414 H 0 0 0 0 0 0 0 0 0 0 0 0 0.9858 0.5078 6.7144 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.6734 0.7469 6.1343 H 0 0 0 0 0 0 0 0 0 0 0 0 0.4099 -1.1639 7.8271 H 0 0 0 0 0 0 0 0 0 0 0 0 -2.1891 -1.3224 2.9501 H 0 0 0 0 0 0 0 0 0 0 0 0 2.9272 -1.5923 4.1034 H 0 0 0 0 0 0 0 0 0 0 0 0 3.7300 3.8259 4.5757 H 0 0 0 0 0 0 0 0 0 0 0 0 4.1972 7.2830 1.3971 H 0 0 0 0 0 0 0 0 0 0 0 0 4.6268 5.1063 -4.2597 H 0 0 0 0 0 0 0 0 0 0 0 0 1.4148 9.1827 1.9373 H 0 0 0 0 0 0 0 0 0 0 0 0 1.9940 9.1323 0.3583 H 0 0 0 0 0 0 0 0 0 0 0 0 -1.2743 9.7967 2.7567 H 0 0 0 0 0 0 0 0 0 0 0 0 -4.5081 9.2888 -2.2447 H 0 0 0 0 0 0 0 0 0 0 0 0 -7.9625 9.6771 1.7142 H 0 0 0 0 0 0 0 0 0 0 0 0 -7.3813 5.0283 4.1031 H 0 0 0 0 0 0 0 0 0 0 0 0 -7.9966 2.0927 4.3069 H 0 0 0 0 0 0 0 0 0 0 0 0 -5.0766 -0.8093 2.9243 H 0 0 0 0 0 0 0 0 0 0 0 0 2.1183 -4.8143 4.8906 H 0 0 0 0 0 0 0 0 0 0 0 0 3.3608 -7.0287 6.8380 H 0 0 0 0 0 0 0 0 0 0 0 0 8.5350 -4.2699 5.7222 H 0 0 0 0 0 0 0 0 0 0 0 0 6.6244 -0.7066 3.3643 H 0 0 0 0 0 0 0 0 0 0 0 0 8.9150 -1.6305 1.7420 H 0 0 0 0 0 0 0 0 0 0 0 0 6.9950 3.6804 -5.1415 H 0 0 0 0 0 0 0 0 0 0 0 0 6.9286 -2.0798 -6.3208 H 0 0 0 0 0 0 0 0 0 0 0 0 1.4486 1.1973 -5.8965 H 0 0 0 0 0 0 0 0 0 0 0 0 -0.0435 -2.4942 -4.7780 H 0 0 0 0 0 0 0 0 0 0 0 0 1 2 1 0 2 3 1 0 3 4 1 0 3 5 1 0 5 6 1 0 6 7 2 3 7 8 1 0 8 9 1 0 8 10 1 0 10 11 2 3 11 12 1 0 12 13 1 0 13 14 1 0 14 15 2 0 15 16 1 0 16 17 2 0 17 18 1 0 18 19 2 0 17 20 1 0 12 21 1 0 21 22 2 3 22 23 1 0 23 24 1 0 24 25 1 0 25 26 2 3 25 27 1 0 23 28 1 0 28 29 2 3 29 30 1 0 30 31 1 0 31 32 1 0 32 33 1 0 33 34 1 0 34 35 1 0 35 36 1 0 36 37 2 3 36 38 1 0 35 39 1 0 39 40 2 3 40 41 1 0 41 42 1 0 42 43 1 0 43 44 1 0 44 45 1 0 45 46 1 0 41 47 1 0 47 48 2 3 48 49 1 0 49 50 1 0 50 51 2 3 51 52 1 0 52 53 1 0 53 54 1 0 52 55 1 0 55 56 2 3 56 57 1 0 57 58 1 0 58 59 1 0 59 60 1 0 60 61 1 0 61 62 1 0 62 63 2 3 62 64 1 0 57 65 1 0 65 66 2 3 66 67 1 0 67 68 1 0 68 69 1 0 69 70 1 0 70 71 1 0 71 72 1 0 72 73 1 0 73 74 2 3 74 75 1 0 75 76 1 0 76 77 1 0 75 78 1 0 78 79 2 3 79 80 1 0 80 81 1 0 81 82 1 0 82 83 1 0 83 84 1 0 84 85 1 0 85 86 2 3 85 87 1 0 80 88 1 0 88 89 2 3 88 90 1 0 78 91 1 0 73 92 1 0 72 93 1 0 93 94 2 3 94 95 1 0 95 96 1 0 96 97 1 0 97 98 1 0 98 99 1 0 99100 1 0 100101 2 0 100102 1 0 102103 1 0 103104 1 0 104105 1 0 105106 1 0 106107 1 0 102108 1 0 108109 2 3 109110 1 0 110111 1 0 111112 2 3 112113 1 0 113114 1 0 113115 1 0 115116 2 3 116117 1 0 117118 1 0 117119 1 0 119120 2 3 120121 1 0 121122 1 0 122123 1 0 123124 1 0 124125 1 0 125126 1 0 121127 1 0 127128 2 3 128129 1 0 129130 1 0 130131 1 0 131132 1 0 132133 1 0 133134 1 0 134135 1 0 135136 2 3 136137 1 0 137138 1 0 138139 1 0 138140 1 0 137141 1 0 141142 2 3 142143 1 0 143144 1 0 144145 2 3 145146 1 0 146147 1 0 147148 1 0 146149 1 0 149150 2 3 149151 1 0 144152 1 0 141153 1 0 135154 1 0 134155 1 0 155156 2 3 156157 1 0 129158 1 0 128159 1 0 120160 1 0 116161 1 0 112162 1 0 109163 1 0 94164 1 0 66165 1 0 56166 1 0 51167 1 0 48168 1 0 40169 1 0 28170 1 0 21171 1 0 10172 1 0 6173 1 0 89 5 1 0 99 95 1 0 19 14 1 0 156 30 1 0 150 67 1 0 1174 1 0 1175 1 0 1176 1 0 2177 1 0 2178 1 0 3179 1 6 4180 1 0 4181 1 0 4182 1 0 5183 1 6 8184 1 6 9185 1 0 9186 1 0 9187 1 0 12188 1 1 13189 1 0 13190 1 0 15191 1 0 16192 1 0 18193 1 0 19194 1 0 20195 1 0 23196 1 1 24197 1 0 24198 1 0 26199 1 0 27200 1 0 30201 1 1 31202 1 0 31203 1 0 34204 1 0 34205 1 0 35206 1 6 37207 1 0 38208 1 0 41209 1 6 42210 1 0 42211 1 0 43212 1 0 43213 1 0 44214 1 0 44215 1 0 45216 1 0 45217 1 0 46218 1 0 46219 1 0 49220 1 0 49221 1 0 52222 1 1 53223 1 0 53224 1 0 54225 1 0 57226 1 1 58227 1 0 58228 1 0 59229 1 0 59230 1 0 60231 1 0 60232 1 0 61233 1 0 63234 1 0 64235 1 0 64236 1 0 67237 1 1 68238 1 0 68239 1 0 71240 1 0 71241 1 0 72242 1 6 75243 1 1 76244 1 0 76245 1 0 77246 1 0 80247 1 1 81248 1 0 81249 1 0 82250 1 0 82251 1 0 83252 1 0 83253 1 0 84254 1 0 86255 1 0 87256 1 0 87257 1 0 90258 1 0 91259 1 0 92260 1 0 95261 1 1 96262 1 0 96263 1 0 97264 1 0 97265 1 0 98266 1 0 98267 1 0 102268 1 1 103269 1 0 103270 1 0 104271 1 0 104272 1 0 105273 1 0 105274 1 0 106275 1 0 106276 1 0 107277 1 0 107278 1 0 110279 1 0 110280 1 0 113281 1 1 114282 1 0 114283 1 0 114284 1 0 117285 1 6 118286 1 0 118287 1 0 118288 1 0 121289 1 1 122290 1 0 122291 1 0 123292 1 0 123293 1 0 124294 1 0 124295 1 0 125296 1 0 125297 1 0 126298 1 0 126299 1 0 129300 1 6 130301 1 0 130302 1 0 133303 1 0 133304 1 0 134305 1 6 137306 1 6 138307 1 6 139308 1 0 139309 1 0 139310 1 0 140311 1 0 143312 1 0 143313 1 0 146314 1 1 147315 1 0 147316 1 0 148317 1 0 151318 1 0 152319 1 0 153320 1 0 154321 1 0 157322 1 0 158323 1 0 158324 1 0 159325 1 0 160326 1 0 161327 1 0 162328 1 0 163329 1 0 164330 1 0 165331 1 0 166332 1 0 167333 1 0 168334 1 0 169335 1 0 170336 1 0 171337 1 0 172338 1 0 173339 1 0 M END

Standard InCHIKey	BYAKBFZIODGOGU-QXJYFGALSA-N
Standard InCHI	InChI=1S/C100H166N36O31S6/c1-7-47(2)75-97(166)118-50(5)80(149)125-60(33-52-23-25-53(141)26-24-52)87(156)126-61(34-71(105)142)88(157)130-67-44-171-169-42-65(77(106)146)129-84(153)55(17-8-11-27-101)119-72(143)36-114-82(151)62(38-137)127-85(154)57(20-14-30-111-99(107)108)124-91(160)66-43-172-173-45-68(92(161)128-64(40-139)90(159)123-58(86(155)134-75)21-15-31-112-100(109)110)133-95(164)70-22-16-32-136(70)98(167)59(19-10-13-29-103)120-73(144)35-113-78(147)48(3)116-79(148)49(4)117-83(152)56(18-9-12-28-102)122-81(150)54(104)41-168-170-46-69(132-93(67)162)94(163)135-76(51(6)140)96(165)115-37-74(145)121-63(39-138)89(158)131-66/h23-26,47-51,54-70,75-76,137-141H,7-22,27-46,101-104H2,1-6H3,(H2,105,142)(H2,106,146)(H,113,147)(H,114,151)(H,115,165)(H,116,148)(H,117,152)(H,118,166)(H,119,143)(H,120,144)(H,121,145)(H,122,150)(H,123,159)(H,124,160)(H,125,149)(H,126,156)(H,127,154)(H,128,161)(H,129,153)(H,130,157)(H,131,158)(H,132,162)(H,133,164)(H,134,155)(H,135,163)(H4,107,108,111)(H4,109,110,112)/t47-,48-,49-,50-,51-,54-,55-,56-,57-,58-,59-,60-,61-,62-,63-,64-,65-,66-,67-,68-,69-,70-,75-,76-/m0/s1
SMILES	CC[C@H](C)[C@H]1C(=N[C@@H](C)C(=N[C@@H](Cc2ccc(cc2)O)C(=N[C@@H](CC(=N)O)C(=N[C@H]2CSSC[C@@H](C(=N)O)N=C([C@H](CCCCN)N=C(CN=C([C@H](CO)N=C([C@H](CCCNC(=N)N)N=C([C@@H]3CSSC[C@@H](C(=N[C@@H](CO)C(=N[C@@H](CCCNC(=N)N)C(=N1)O)O)O)N=C([C@@H]1CCCN1C(=O)[C@H](CCCCN)N=C(CN=C([C@H](C)N=C([C@H](C)N=C([C@H](CCCCN)N=C([C@H](CSSC[C@@H](C(=N[C@@H]([C@H](C)O)C(=NCC(=N[C@@H](CO)C(=N3)O)O)O)O)N=C2O)N)O)O)O)O)O)O)O)O)O)O)O)O)O)O)O

Calculated Properties

Physi-Chem Properties

Molecular Weight:	2559.08	Volume:	2393.077 ? Van der Waals volume.
Dense:	1.069	LogP:	-9.124 ? The logarithm of the n-octanol/water distribution coefficients.
logD7.4:	-3.785 ? The logarithm of the n-octanol/water distribution coefficient at pH=7.4.	LogS:	-9.396 ? The logarithm of aqueous solubility value.
Rotatable Bonds:	33.0	Rigid Bonds:	102.0
TPSA:	1187.07 ? Topological Polar Surface Area.	H-Bond Acceptor:	67.0
H-Bond Donor:	48.0	Rings:	5.0
Heavy Atoms:	73.0

MedChem Properties

QED Drug-Likeness Score:	0.021	GASA:	1.0 ? GASA represents the probability of being difficult to synthesize, ranging from 0 to 1.
Synthetic Accessibility Score:	9.586	Fsp³:	0.66
MCE-18:	238.675 ? MCE-18 stands for medicinal chemistry evolution.MCE-18≥45 is considered a suitable value.	Lipinski Rule-of-5:	Accepted
Pfizer Rule:	Rejected	GSK Rule:	Accepted
Golden Triangle Rule:	Accepted	BMS Rule:	1
Chelating Alert:	0	PAINS Alert:	0
Colloidal aggregators:	0.333	Fluc inhibitor:	0.339 ? The fluc inhibitor value is the probability of being fLuc inhibitors, within the range of 0 to 1.
Blue fluorescence:	0.222 ? The blue fluorescence value is the probability of being blue fluorescence, within the range of 0 to 1	Green fluorescence:	0.335 ? The green fluorescence value is the probability of being green fluorescence, within the range of 0 to 1
Reactive compounds:	0.837	Promiscuous compounds:	0.129

ADMET Properties (ADMETlab3.0)

ADMET: Absorption

Caco-2 Permeability:	-6.295	MDCK Permeability:	-5.489
Pgp-inhibitor:	0.0	Pgp-substrate:	1.0
PAMPA:	1.0 ? The experimental data for Peff was logarithmically transformed (logPeff). Molecules with log Peff values below 2.0 were classified as low-permeability (Category 0), while those with log Peff values exceeding 2.5 were classified as high-permeability (Category 1).	Human Intestinal Absorption (HIA):	1.0
20% Bioavailability (F20%):	1.0	30% Bioavailability (F30%):	1.0
50% Bioavailability (F50%):	1.0

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB):	0.0	MRP1:	0.998
Plasma Protein Binding (PPB):	-20.053%	Volume Distribution (VD):	-0.762
Fu:	181.439% ? The fraction unbound in plasms.	OATP1B1 inhibitor:	1.0
OATP1B3 inhibitor:	1.0	BCRP inhibitor:	0.0
BSEP inhibitor:	0.0

ADMET: Metabolism

CYP1A2-inhibitor:	0.0	CYP1A2-substrate:	0.0
CYP2C19-inhibitor:	0.001	CYP2C19-substrate:	0.0
CYP2C9-inhibitor:	0.006	CYP2C9-substrate:	0.0
CYP2D6-inhibitor:	1.0	CYP2D6-substrate:	0.0
CYP3A4-inhibitor:	1.0	CYP3A4-substrate:	0.0
CYP2B6-substrate:	0.0	CYP2C8-inhibitor:	0.0
HLM stability:	0.0 ? Human liver microsomal (HLM) stability. Category 0: stable+ (HLM > 30 min); Category 1: unstable- (HLM ≤ 30 min). The output value is the probability of human liver microsomal instability, where a value closer to 1 indicates a higher likelihood of instability.

ADMET: Excretion

Clearance (CL):

-3.345

Half-life (T1/2):

8.866

ADMET: Toxicity

hERG Blockers:	0.0	hERG Blockers (10um):	0.0
Human Hepatotoxicity (H-HT):	1.0	Drug-induced Liver Injury (DILI):	1.0
AMES Toxicity:	0.0	Rat Oral Acute Toxicity:	0.991
Maximum Recommended Daily Dose:	0.0	Skin Sensitization:	1.0
Carcinogencity:	0.986	Eye Corrosion:	0.0
Eye Irritation:	0.0	Respiratory Toxicity:	0.999
Drug-induced Neurotoxicity:	0.0	Ototoxicity:	1.0
Hematotoxicity:	0.064	Drug-induced Nephrotoxicity:	1.0
Genotoxicity:	1.0	RPMI-8226 Immunitoxicity:	0.0
A549 Cytotoxicity:	0.0	Hek293 Cytotoxicity:	0.0
BCF:	-0.3 ? Bioconcentration factors are used for considering secondary poisoning potential and assessing risks to human health via the food chain. The unit is -log10[(mg/L)/(1000*MW)].	IGC50:	2.972 ? 48 hour Tetrahymena pyriformis IGC50. The unit of IGC50 is -log10[(mg/L)/(1000*MW)].
LC50DM:	5.583 ? 48 hour Daphnia magna LC50. The unit of LC50DM is -log10[(mg/L)/(1000*MW)].	LC50FM:	4.174 ? 96 hour fathead minnow LC50. The unit of LC50FM is -log10[(mg/L)/(1000*MW)].

Species Source

Organism ID	Organism Name	Taxonomy Level	Family	SuperKingdom	Isolation Part	Collection Location	Collection Time	Reference
NPO40085	Conus striatus	Species	Conidae	Eukaryota	n.a.	n.a.	n.a.	PMID[14510617]
NPO40085	Conus striatus	Species	Conidae	Eukaryota	n.a.	n.a.	n.a.	Database[COCONUT]

Note for Reference:
In addition to directly collecting NP source organism data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated them from below databases:
☉ UNPD: Universal Natural Products Database [PMID: 23638153].
☉ StreptomeDB: a database of streptomycetes natural products [PMID: 33051671].
☉ TM-MC: a database of medicinal materials and chemical compounds in Northeast Asian traditional medicine [PMID: 26156871].
☉ TCM@Taiwan: a Traditional Chinese Medicine database [PMID: 21253603].
☉ TCMID: a Traditional Chinese Medicine database [PMID: 29106634].
☉ TCMSP: The traditional Chinese medicine systems pharmacology database and analysis platform [PMID: 24735618].
☉ HerDing: a herb recommendation system to treat diseases using genes and chemicals [PMID: 26980517].
☉ MetaboLights: a metabolomics database [PMID: 27010336].
☉ FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

NP Quantity Composition/Concentration

Organism ID	Organism Name	Organism Material Preparation	Organism Part	NP Quantity (Standard)	NP Quantity (Minimum)	NP Quantity (Maximum)	Quantity Unit	Reference

Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP quantitative records for specific NP domains (e.g., NPS from foods or herbs) from domain-specific databases. These databases include:
☉ DUKE: Dr. Duke's Phytochemical and Ethnobotanical Databases.
☉ PHENOL EXPLORER: is the first comprehensive database on polyphenol content in foods [PMID: 24103452], its homepage can be accessed at here.
☉ FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

Biological Activity

Activity Type	# Activity
Activity	49
EC50	1

Activity Type	# Activity
Organism	50

Molecular-level activity

Target ID	Target Type	Target Name	Target Organism	Activity Type	Activity Relation	Value	Unit	Reference

In vitro activity

Target ID	Target Type	Target Name	Target Organism	Activity Type	Activity Relation	Value	Unit	Reference

In vivo activity

Target ID	Target Type	Target Name	Target Organism	Activity Type	Activity Relation	Value	Unit	Reference
NPT32	Organism	Mus musculus	Mus musculus	Activity	=	23.4	s	PMID[14510617]
NPT32	Organism	Mus musculus	Mus musculus	Activity	=	20.0	s	PMID[14510617]
NPT32	Organism	Mus musculus	Mus musculus	Activity	=	15.8	s	PMID[14510617]
NPT32	Organism	Mus musculus	Mus musculus	Activity	=	43.0	s	PMID[14510617]
NPT32	Organism	Mus musculus	Mus musculus	Activity	=	16.2	s	PMID[14510617]
NPT32	Organism	Mus musculus	Mus musculus	Activity	=	15.0	s	PMID[14510617]
NPT32	Organism	Mus musculus	Mus musculus	Activity	=	49.6	s	PMID[14510617]
NPT32	Organism	Mus musculus	Mus musculus	Activity	=	39.6	s	PMID[14510617]
NPT32	Organism	Mus musculus	Mus musculus	Activity	=	38.2	s	PMID[14510617]
NPT32	Organism	Mus musculus	Mus musculus	Activity	=	29.4	s	PMID[14510617]
NPT32	Organism	Mus musculus	Mus musculus	Activity	>	60.0	s	PMID[14510617]
NPT32	Organism	Mus musculus	Mus musculus	Activity	=	59.8	s	PMID[14510617]
NPT32	Organism	Mus musculus	Mus musculus	Activity	=	55.8	s	PMID[14510617]
NPT32	Organism	Mus musculus	Mus musculus	Activity	=	51.8	s	PMID[14510617]
NPT32	Organism	Mus musculus	Mus musculus	Activity	=	12.1	s	PMID[14510617]
NPT32	Organism	Mus musculus	Mus musculus	Activity	=	10.0	s	PMID[14510617]
NPT32	Organism	Mus musculus	Mus musculus	Activity	=	9.8	s	PMID[14510617]
NPT32	Organism	Mus musculus	Mus musculus	Activity	=	8.1	s	PMID[14510617]
NPT32	Organism	Mus musculus	Mus musculus	Activity	=	10.5	s	PMID[14510617]
NPT32	Organism	Mus musculus	Mus musculus	Activity	=	8.5	s	PMID[14510617]
NPT32	Organism	Mus musculus	Mus musculus	Activity	=	7.66	s	PMID[14510617]
NPT32	Organism	Mus musculus	Mus musculus	Activity	=	12.2	s	PMID[14510617]
NPT32	Organism	Mus musculus	Mus musculus	Activity	=	12.9	s	PMID[14510617]
NPT32	Organism	Mus musculus	Mus musculus	Activity	=	11.5	s	PMID[14510617]
NPT32	Organism	Mus musculus	Mus musculus	Activity	=	10.4	s	PMID[14510617]
NPT32	Organism	Mus musculus	Mus musculus	Activity	=	14.2	s	PMID[14510617]
NPT32	Organism	Mus musculus	Mus musculus	Activity	=	12.4	s	PMID[14510617]
NPT32	Organism	Mus musculus	Mus musculus	Activity	=	9.6	s	PMID[14510617]
NPT32	Organism	Mus musculus	Mus musculus	Activity	=	7.3	s	PMID[14510617]
NPT32	Organism	Mus musculus	Mus musculus	Activity	=	11.9	s	PMID[14510617]
NPT32	Organism	Mus musculus	Mus musculus	Activity	=	10.2	s	PMID[14510617]
NPT32	Organism	Mus musculus	Mus musculus	Activity	=	8.8	s	PMID[14510617]
NPT32	Organism	Mus musculus	Mus musculus	Activity	=	11.2	s	PMID[14510617]
NPT32	Organism	Mus musculus	Mus musculus	Activity	=	11.8	s	PMID[14510617]
NPT32	Organism	Mus musculus	Mus musculus	Activity	=	11.1	s	PMID[14510617]
NPT32	Organism	Mus musculus	Mus musculus	Activity	=	11.6	s	PMID[14510617]
NPT32	Organism	Mus musculus	Mus musculus	EC50	=	0.75	ug/kg	PMID[14510617]
NPT32	Organism	Mus musculus	Mus musculus	Activity	=	9.6	n.a.	PMID[14510617]
NPT29	Organism	Rattus norvegicus	Rattus norvegicus	Activity	=	3.3	s	PMID[14510617]
NPT29	Organism	Rattus norvegicus	Rattus norvegicus	Activity	=	3.6	s	PMID[14510617]
NPT29	Organism	Rattus norvegicus	Rattus norvegicus	Activity	=	3.5	s	PMID[14510617]
NPT29	Organism	Rattus norvegicus	Rattus norvegicus	Activity	=	3.2	s	PMID[14510617]
NPT29	Organism	Rattus norvegicus	Rattus norvegicus	Activity	=	4.0	s	PMID[14510617]
NPT29	Organism	Rattus norvegicus	Rattus norvegicus	Activity	=	4.5	s	PMID[14510617]
NPT29	Organism	Rattus norvegicus	Rattus norvegicus	Activity	=	100.0	g	PMID[14510617]
NPT29	Organism	Rattus norvegicus	Rattus norvegicus	Activity	=	150.0	g	PMID[14510617]

Experimental ADME

Experiment Model	Experiment Tissue	ADME Type	ADME Relation	ADME Value	ADME Unit	Reference

Experimental Toxicity

Quantitative toxicity

Experiment Model	Experiment Organism	Toxicity Type	Toxicity Relation	Toxicity Value	Toxicity Unit	Reference
-	Mus musculus	LD50	=	13.5	mg.kg-1	PMID[14510617]

Common Abbreviations:
LC: Lethal Concentration; LD: Lethal Dose; LT:Lethal Time; NOAEL: No-observed-adverse-effect Level; BMDL: Benchmark Dose Lower Confidence Limit; BMD: Benchmark Dose; BMC:Benchmark Concentration; LOAEL: Lowest Observed Adverse Effect Level; RfD:Reference Dose; RfC:Reference Concentration; MRL: Minimal Risk Level; MEG: Maximum Exposure Guideline; PAC: Protective Action Criteria

Categorical toxicity labels

Hepatotoxicity	Carcinogenicity	Mutagenicity	Cardiotoxicity	Respiratory Toxicity	Eye Irritation	Endocrine Disruption

Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP toxicity records from domain-specific databases. These databases include:
☉ ToxValDB: a curated database that compiles quantitative toxicity values for chemicals from diverse public sources to support toxicological research and risk assessment.
☉ TOXRIC: a comprehensive, free-to-access, online database providing toxicological/feature data. The toxicity labels are retrieved from this database. [PMID: 36400569]

Chemically structural similarity

Similar Active Natural Products in NPASS

Top-200 similar NPs were calculated against the active-NP-set (includes approximately 50,000 NPs with experimentally-derived bioactivity available in NPASS)

Similarity is measured using the Tanimoto coefficient (Tc) , which compares the binary fingerprints of two molecules. Tc is calculated as the intersection divided by the union of '1' bits in the fingerprints, ranging from 0 to 1, with 1 indicating highest similarity.

● The left chart: Distribution of similarity level between NPC481408 and all remaining natural products in the NPASS database.
● The right table: Most similar natural products (Tc>=0.5 or Top200).

range	Tanimoto Coefficient
0-0.1	26915
0.1-0.2	22055
0.2-0.3	582
0.3-0.4	206
0.4-0.5	51
0.5-0.6	28
0.6-0.7	16
0.7-0.8	0
0.8-0.85	0
0.85-0.9	0
0.9-0.95	0
0.95-1	0

Similarity Score	Similarity Level	Natural Product ID
0.7215	Intermediate Similarity	NPC477632
0.7215	Intermediate Similarity	NPC486505
0.7107	Intermediate Similarity	NPC485246
0.7013	Intermediate Similarity	NPC329295
0.6852	Remote Similarity	NPC484078
0.6852	Remote Similarity	NPC485245
0.6832	Remote Similarity	NPC486507
0.6829	Remote Similarity	NPC485243
0.6627	Remote Similarity	NPC484964
0.6424	Remote Similarity	NPC484963
0.6424	Remote Similarity	NPC485115
0.6416	Remote Similarity	NPC477635
0.6369	Remote Similarity	NPC484365
0.6343	Remote Similarity	NPC486506
0.6343	Remote Similarity	NPC485247
0.6343	Remote Similarity	NPC486514
0.6296	Remote Similarity	NPC481409
0.6162	Remote Similarity	NPC486517
0.6095	Remote Similarity	NPC482981
0.6087	Remote Similarity	NPC485114
0.5978	Remote Similarity	NPC329843
0.5957	Remote Similarity	NPC489512
0.5934	Remote Similarity	NPC489216
0.5875	Remote Similarity	NPC485116
0.5866	Remote Similarity	NPC486515
0.5829	Remote Similarity	NPC489217
0.5819	Remote Similarity	NPC484363
0.5815	Remote Similarity	NPC489215
0.5764	Remote Similarity	NPC480595
0.5732	Remote Similarity	NPC484875
0.5607	Remote Similarity	NPC320968
0.5479	Remote Similarity	NPC485244
0.5455	Remote Similarity	NPC489549
0.5455	Remote Similarity	NPC296968
0.5398	Remote Similarity	NPC484364
0.5338	Remote Similarity	NPC326349
0.5338	Remote Similarity	NPC323336
0.5323	Remote Similarity	NPC484965
0.5279	Remote Similarity	NPC479083
0.5267	Remote Similarity	NPC479144
0.5266	Remote Similarity	NPC480440
0.5263	Remote Similarity	NPC485242
0.5243	Remote Similarity	NPC484362
0.5226	Remote Similarity	NPC479082
0.5135	Remote Similarity	NPC486503
0.513	Remote Similarity	NPC477633
0.5081	Remote Similarity	NPC485125
0.5029	Remote Similarity	NPC485113

Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

● The left chart: Distribution of similarity level between NPC481408 and all drugs/candidates.
● The right table: Most similar clinical/approved drugs (Tc>=0.5 or Top200).

range	Tanimoto Coefficient
0-0.1	4949
0.1-0.2	4095
0.2-0.3	85
0.3-0.4	20
0.4-0.5	1
0.5-0.6	0
0.6-0.7	0
0.7-0.8	0
0.8-0.85	0
0.85-0.9	0
0.9-0.95	0
0.95-1	0

Similarity Score	Similarity Level	Drug ID	Developmental Stage
		NPD

Bioactivity similarity

Similar Natural Products in NPASS

Similarity level is defined by Bioactivity similarity was calculated based on bioactivity descriptors of compounds. The bioactivity descriptors were calculated by a recently developed AI algorithm Chemical Checker (CC) [Nature Biotechnology, 38:1087–1096, 2020; Nature Communications, 12:3932, 2021], which evaluated bioactivity similarities at five levels:
☉ A: chemistry similarity;
☉ B: biological targets similarity;
☉ C: networks similarity;
☉ D: cell-based bioactivity similarity;
☉ E: similarity based on clinical data.
Those 5 categories of CC bioactivity descriptors were calculated and then subjected to manifold projection using UMAP algorithm, to project all NPs on a 2-Dimensional space. The current NP was highlighted with a small circle in the 2-D map. Below figures: left-to-right, A-to-E.

A: chemistry similarity

B: biological targets similarity

C: networks similarity

D: cell-based bioactivity similarity

E: similarity based on clinical data