Natural Product: NPC249078| Natural Product ID | NPC249078 |
|
Common Name
The InCHIKey will be temporarily assigned as the "Common Name" if no IUPAC name or alternative short name is available.
| (1S,4R,5R,8S,9S)-Clovane-5,9-Diol |
| IUPAC Name | (3S,3aS,6R,7R,9aS)-1,1,7-trimethyl-3,4,5,6,8,9,9a,10-octahydro-2H-tricyclo[6.3.1.0^{1,5}]dodecane-3,6-diol |
| Synonyms | |
| Synthetic Gene Cluster | n.a. |
| ChEMBL Identifier | CHEMBL465622 |
| PubChem CID |
15599878 |
| Chemical Classification |
|
The Chemical Classification was calculated by Classyfire, a software for chemical taxonomy calculation. Reference: DOI:10.1186/s13321-016-0174-y.
Chemical Representations
| Standard InCHIKey | BWXJQHJHGMZLBT-OEMOEHNSSA-N |
| Standard InCHI | InChI=1S/C15H26O2/c1-13(2)8-12(17)15-7-5-11(16)14(3,9-15)6-4-10(13)15/h10-12,16-17H,4-9H2,1-3H3/t10-,11+,12-,14+,15-/m0/s1 |
| SMILES | CC1(C)C[C@@H]([C@@]23CC[C@H]([C@](C)(CC[C@@H]13)C2)O)O |
  Calculated Properties| Molecular Weight:   | 238.19 | Volume:   | 259.907 Van der Waals volume.
|
| Dense:   | 0.916 | LogP:   | 2.374 The logarithm of the n-octanol/water distribution coefficients.
|
| logD7.4:   | 2.617 The logarithm of the n-octanol/water distribution coefficient at pH=7.4.
|
LogS:   | -2.497 The logarithm of aqueous solubility value.
|
| Rotatable Bonds:   | 0.0 | Rigid Bonds:   | 14.0 |
| TPSA:   | 40.46 Topological Polar Surface Area.
|
H-Bond Acceptor:   | 2.0 |
| H-Bond Donor:   | 2.0 | Rings:   | 3.0 |
| Heavy Atoms:   | 2.0 |
| QED Drug-Likeness Score:   | 0.681 | GASA:   | 1.0 GASA represents the probability of being difficult to synthesize, ranging from 0 to 1.
|
| Synthetic Accessibility Score:   | 5.577 | Fsp3:   | 1.0 |
| MCE-18:   | 79.8 MCE-18 stands for medicinal chemistry evolution.MCE-18≥45 is considered a suitable value.
|
Lipinski Rule-of-5:   | Rejected |
| Pfizer Rule:   | Rejected | GSK Rule:   | Rejected |
| Golden Triangle Rule:   | Rejected | BMS Rule:   | 0 |
| Chelating Alert:   | 0 | PAINS Alert:   | 0 |
| Colloidal aggregators:   | 0.391 | Fluc inhibitor:   | 0.004 The fluc inhibitor value is the probability of being fLuc inhibitors, within the range of 0 to 1.
|
| Blue fluorescence:   | 0.015 The blue fluorescence value is the probability of being blue fluorescence, within the range of 0 to 1
|
Green fluorescence:   | 0.0 The green fluorescence value is the probability of being green fluorescence, within the range of 0 to 1
|
| Reactive compounds:   | 0.792 | Promiscuous compounds:   | 0.146 |
| Caco-2 Permeability:   | -4.505 | MDCK Permeability:   | -4.62 |
| Pgp-inhibitor:   | 0.133 | Pgp-substrate:   | 0.198 |
| PAMPA:   |
0.484 The experimental data for Peff was logarithmically transformed (logPeff). Molecules with log Peff values below 2.0 were classified as low-permeability (Category 0), while those with log Peff values exceeding 2.5 were classified as high-permeability (Category 1).
|
Human Intestinal Absorption (HIA):   | 0.022 |
| 20% Bioavailability (F20%):   | 0.572 | 30% Bioavailability (F30%):   | 0.248 |
| 50% Bioavailability (F50%):   | 0.971 |
| Blood-Brain-Barrier Penetration (BBB):   | 0.441 | MRP1:   | 0.305 |
| Plasma Protein Binding (PPB):   | 77.171% | Volume Distribution (VD):   | -0.062 |
| Fu: |
24.213% The fraction unbound in plasms.
|
OATP1B1 inhibitor:   | 1.0 |
| OATP1B3 inhibitor:   | 0.997 | BCRP inhibitor:   | 0.323 |
| BSEP inhibitor:   | 0.753 |
| CYP1A2-inhibitor:   | 0.001 | CYP1A2-substrate:   | 0.008 |
| CYP2C19-inhibitor:   | 0.336 | CYP2C19-substrate:   | 0.188 |
| CYP2C9-inhibitor:   | 0.043 | CYP2C9-substrate:   | 0.181 |
| CYP2D6-inhibitor:   | 0.037 | CYP2D6-substrate:   | 0.026 |
| CYP3A4-inhibitor:   | 0.929 | CYP3A4-substrate:   | 0.001 |
| CYP2B6-substrate:   | 0.0 | CYP2C8-inhibitor:   | 0.53 |
| HLM stability:   |
0.695 Human liver microsomal (HLM) stability. Category 0: stable+ (HLM > 30 min); Category 1: unstable- (HLM ≤ 30 min). The output value is the probability of human liver microsomal instability, where a value closer to 1 indicates a higher likelihood of instability.
|
| Clearance (CL):   | 14.683 | Half-life (T1/2):   | 1.821 |
| hERG Blockers:   | 0.13 | hERG Blockers (10um):   | 0.478 |
| Human Hepatotoxicity (H-HT):   | 0.555 | Drug-induced Liver Injury (DILI):   | 0.109 |
| AMES Toxicity:   | 0.47 | Rat Oral Acute Toxicity:   | 0.507 |
| Maximum Recommended Daily Dose:   | 0.488 | Skin Sensitization:   | 0.679 |
| Carcinogencity:   | 0.799 | Eye Corrosion:   | 0.198 |
| Eye Irritation:   | 0.907 | Respiratory Toxicity:   | 0.746 |
| Drug-induced Neurotoxicity:   | 0.262 | Ototoxicity:   | 0.379 |
| Hematotoxicity:   | 0.243 | Drug-induced Nephrotoxicity:   | 0.361 |
| Genotoxicity:   | 0.293 | RPMI-8226 Immunitoxicity:   | 0.075 |
| A549 Cytotoxicity:   | 0.268 | Hek293 Cytotoxicity:   | 0.403 |
| BCF:   |
0.824 Bioconcentration factors are used for considering secondary poisoning potential and assessing risks to human health via the food chain. The unit is -log10[(mg/L)/(1000*MW)].
|
IGC50:   |
3.142 48 hour Tetrahymena pyriformis IGC50. The unit of IGC50 is -log10[(mg/L)/(1000*MW)].
|
| LC50DM:   |
4.531 48 hour Daphnia magna LC50. The unit of LC50DM is -log10[(mg/L)/(1000*MW)].
|
LC50FM:   |
3.858 96 hour fathead minnow LC50. The unit of LC50FM is -log10[(mg/L)/(1000*MW)].
|
  Species Source| Organism ID | Organism Name | Taxonomy Level | Family | SuperKingdom | Isolation Part | Collection Location | Collection Time | Reference |
|---|---|---|---|---|---|---|---|---|
| NPO20835 | Medicago truncatula | Species | Fabaceae | Eukaryota | n.a. | n.a. | n.a. | DOI[10.1007/BF00270213] |
| NPO19965 | Helenium alternifolium | Species | Asteraceae | Eukaryota | n.a. | aerial part | n.a. | DOI[10.1021/jo01271a036] |
| NPO22258 | Chrysanthemum indicum | Species | Asteraceae | Eukaryota | Flowers | n.a. | n.a. | DOI[10.5897/JMPR.9000078] |
| NPO21850 | Paeonia delavayi | Species | Paeoniaceae | Eukaryota | n.a. | root | n.a. |
PMID[10945272] |
| NPO22258 | Chrysanthemum indicum | Species | Asteraceae | Eukaryota | n.a. | flower | n.a. |
PMID[12130858] |
| NPO23006 | Moringa stenopetala | Species | Moringaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[12709911] |
| NPO17119 | Dalea versicolor | Species | Fabaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[15043439] |
| NPO22820 | Sarcophyton glaucum | Species | Alcyoniidae | Eukaryota | n.a. | n.a. | n.a. |
PMID[15332846] |
| NPO18606 | Achyrocline bogotensis | Species | Asteraceae | Eukaryota | n.a. | Colombian | n.a. |
PMID[15844937] |
| NPO22820 | Sarcophyton glaucum | Species | Alcyoniidae | Eukaryota | n.a. | Amami Oshima, Kagoshima Prefecture, Japan | n.a. |
PMID[16933862] |
| NPO3291 | Cynanchum auriculatum | Species | Apocynaceae | Eukaryota | n.a. | root | n.a. |
PMID[18401845] |
| NPO22820 | Sarcophyton glaucum | Species | Alcyoniidae | Eukaryota | n.a. | n.a. | n.a. |
PMID[19331379] |
| NPO17362 | Alstonia yunnanensis | Species | Apocynaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[19775092] |
| NPO18055 | Isodon adenolomus | Species | Lamiaceae | Eukaryota | n.a. | aerial part | n.a. |
PMID[21534539] |
| NPO18055 | Isodon adenolomus | Species | Lamiaceae | Eukaryota | aerial parts | Shangrila, Yunnan Province, China | 2008-AUG |
PMID[21534539] |
| NPO22820 | Sarcophyton glaucum | Species | Alcyoniidae | Eukaryota | n.a. | n.a. | n.a. |
PMID[21563811] |
| NPO20835 | Medicago truncatula | Species | Fabaceae | Eukaryota | n.a. | root | n.a. |
PMID[21615146] |
| NPO21278 | Lysimachia clethroides | Species | Primulaceae | Eukaryota | n.a. | aerial part | n.a. |
PMID[21928797] |
| NPO791 | Laburnum anagyroides | Species | Fabaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[23022271] |
| NPO21850 | Paeonia delavayi | Species | Paeoniaceae | Eukaryota | n.a. | seed | n.a. |
PMID[23497864] |
| NPO22258 | Chrysanthemum indicum | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[26099993] |
| NPO22258 | Chrysanthemum indicum | Species | Asteraceae | Eukaryota | Flowers | n.a. | n.a. |
PMID[28156114] |
| NPO22258 | Chrysanthemum indicum | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[29400471] |
| NPO22372 | Callicarpa bodinieri | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[29578342] |
| NPO22258 | Chrysanthemum indicum | Species | Asteraceae | Eukaryota | Aerial Parts | n.a. | n.a. |
PMID[30726671] |
| NPO12148.2 | Acer pictum subsp. okamotoanum | Subspecies | Sapindaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[9461665] |
| NPO14240 | Justicia ghiesbreghtiana | Species | Acanthaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[9748395] |
| NPO12807 | Citrus aurantiifolia | Species | Rutaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO791 | Laburnum anagyroides | Species | Fabaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO15478 | Senna sophera | Species | Fabaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO22698 | Achillea pannonica | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO27489 | Alloascoidea hylecoeti | Species | Alloascoideaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO26325 | Annulusmagnus triseptatus | Species | Annulatascaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO22113 | Anthocercis genistoides | Species | Solanaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO27929 | Aphanamixis polystachya | Species | Meliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO21413 | Armillaria tabescens | Species | Physalacriaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO22438 | Asclepias speciosa | Species | Apocynaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO22372 | Callicarpa bodinieri | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO22499 | Corydalis flabellata | Species | Papaveraceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO13409 | Crocus asturicus | Species | Iridaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO21654 | Cyerce cristallina | Species | Caliphyllidae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO18123 | Dichapetalum madagascariense | Species | Dichapetalaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO19891 | Diospyros crassiflora | Species | Ebenaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO20967 | Doriopsilla albopunctata | Species | Dendrodorididae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO20381 | Echites hirsuta | Species | Apocynaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO22756 | Epimedium versicolor | Species | Berberidaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO28103 | Erica carnea | Species | Ericaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO21343 | Eupatorium fortunei | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO22953 | Eupatorium pauciflorum | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO19965 | Helenium alternifolium | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO15763 | Huperzia lucidula | Species | Lycopodiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO14240 | Justicia ghiesbreghtiana | Species | Acanthaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO21278 | Lysimachia clethroides | Species | Primulaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO21032 | Manilkara hexandra | Species | Sapotaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO20835 | Medicago truncatula | Species | Fabaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO20896 | Mimosa tenuiflora | Species | Fabaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO23006 | Moringa stenopetala | Species | Moringaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO21089 | Mourera fluviatilis | Species | Podostemaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO21850 | Paeonia delavayi | Species | Paeoniaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO4478 | Parmelia pseudoreticulata | Species | Parmeliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO20583 | Phaulopsis imbricata | Species | Acanthaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO20021 | Physcia aegialita | Species | Physciaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO20088 | Piper sintenense | Species | Piperaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO8115 | Polyopes affinis | Species | Halymeniaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO22048 | Pteris palmiformis | Species | Pteridaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO20522 | Pyura sacciformis | Species | Pyuridae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO21599 | Ricciocarpos natans | Species | Ricciaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO22820 | Sarcophyton glaucum | Species | Alcyoniidae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO22887 | Scutellaria violacea | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO20457 | Spirastrella inconstans | Species | Spirastrellidae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO22308 | Stevia satureiaefolia | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO20707 | Stillingia sanguinolenta | Species | Euphorbiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO20203 | Syringa komarowi | Species | Oleaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO20261 | Teucrium trifidum | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO20771 | Thalictrum fortunei | Species | Ranunculaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO21221 | Trapa bispinosa | Species | Lythraceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO21725 | Uncaria glabrata | Species | Rubiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO21158 | Viburnum fur | Species | Adoxaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO22258 | Chrysanthemum indicum | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO17119 | Dalea versicolor | Species | Fabaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO18055 | Isodon adenolomus | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO26131 | Cliona chilensis | Species | Clionaidae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO14262 | Eucalyptus polyanthemos | Species | Myrtaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO19118 | Hippeastrum vittatum | Species | Amaryllidaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO13974 | Hygrophorus pustulatus | Species | Hygrophoraceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO1826 | Teucrium barbeyanum | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO12148.2 | Acer pictum subsp. okamotoanum | Subspecies | Sapindaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO18606 | Achyrocline bogotensis | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO17362 | Alstonia yunnanensis | Species | Apocynaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO19522 | Arthropsis truncata | Species | n.a. | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO13832 | Aspilia hispida | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO17911 | Blepharisma japonicum | Species | Blepharismidae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO15497 | Caria ino | Species | Riodinidae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO2377 | Cetraria ciliaris | Species | Parmeliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO19580 | Chamaemelum fuscatum | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO3291 | Cynanchum auriculatum | Species | Apocynaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO19311 | Dasymaschalon blumei | Species | Annonaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO16567 | Doriopsilla areolata | Species | Dendrodorididae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO10852 | Felimare midatlantica | Species | Chromodorididae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO17643 | Penicillium pedemontanum | Species | Aspergillaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO19777 | Pholiota adiposa | Species | Strophariaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO4230 | Protoparmeliopsis peltata | Species | Lecanoraceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO4984 | Salvia cana | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO19638 | Scutellaria albida | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO13414 | Senecio fuertesii | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO17783 | Sideritis cystosiphon | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO18356 | Stachys tuberifera | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO16997 | Talaromyces aculeatus | Species | Trichocomaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO18435 | Tylophora atrofolliculata | Species | Apocynaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO16990 | Verbesina virgata | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO6696 | Chukrasia tabularis | Species | Meliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO12807 | Citrus aurantiifolia | Species | Rutaceae | Eukaryota | n.a. | n.a. | Database[FooDB] | |
| NPO12807 | Citrus aurantiifolia | Species | Rutaceae | Eukaryota | Fruit | n.a. | n.a. | Database[FooDB] |
| NPO12807 | Citrus aurantiifolia | Species | Rutaceae | Eukaryota | Plant | n.a. | n.a. | Database[FooDB] |
| NPO12807 | Citrus aurantiifolia | Species | Rutaceae | Eukaryota | n.a. | n.a. | Database[FooDB] | |
| NPO21343 | Eupatorium fortunei | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO791 | Laburnum anagyroides | Species | Fabaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO18435 | Tylophora atrofolliculata | Species | Apocynaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO22258 | Chrysanthemum indicum | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO17362 | Alstonia yunnanensis | Species | Apocynaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO21221 | Trapa bispinosa | Species | Lythraceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO3291 | Cynanchum auriculatum | Species | Apocynaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO18356 | Stachys tuberifera | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO21850 | Paeonia delavayi | Species | Paeoniaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO12807 | Citrus aurantiifolia | Species | Rutaceae | Eukaryota | Fruits | n.a. | Database[Phenol-Explorer] | |
| NPO12807 | Citrus aurantiifolia | Species | Rutaceae | Eukaryota | n.a. | n.a. | Database[Phenol-Explorer] | |
| NPO22258 | Chrysanthemum indicum | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO21343 | Eupatorium fortunei | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO21278 | Lysimachia clethroides | Species | Primulaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO791 | Laburnum anagyroides | Species | Fabaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO6696 | Chukrasia tabularis | Species | Meliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO18356 | Stachys tuberifera | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO3291 | Cynanchum auriculatum | Species | Apocynaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO60 | Neoshirakia japonica | Species | Euphorbiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO17362 | Alstonia yunnanensis | Species | Apocynaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO21413 | Armillaria tabescens | Species | Physalacriaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO12807 | Citrus aurantiifolia | Species | Rutaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO21221 | Trapa bispinosa | Species | Lythraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO18435 | Tylophora atrofolliculata | Species | Apocynaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO15763 | Huperzia lucidula | Species | Lycopodiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO21850 | Paeonia delavayi | Species | Paeoniaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO15478 | Senna sophera | Species | Fabaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO22438 | Asclepias speciosa | Species | Apocynaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO22258 | Chrysanthemum indicum | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO21343 | Eupatorium fortunei | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO3291 | Cynanchum auriculatum | Species | Apocynaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO17362 | Alstonia yunnanensis | Species | Apocynaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO21221 | Trapa bispinosa | Species | Lythraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO791 | Laburnum anagyroides | Species | Fabaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO22258 | Chrysanthemum indicum | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO20021 | Physcia aegialita | Species | Physciaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO22820 | Sarcophyton glaucum | Species | Alcyoniidae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO18123 | Dichapetalum madagascariense | Species | Dichapetalaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO20771 | Thalictrum fortunei | Species | Ranunculaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO21221 | Trapa bispinosa | Species | Lythraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO12807 | Citrus aurantiifolia | Species | Rutaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO22438 | Asclepias speciosa | Species | Apocynaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO21850 | Paeonia delavayi | Species | Paeoniaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO10852 | Felimare midatlantica | Species | Chromodorididae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO18055 | Isodon adenolomus | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO13409 | Crocus asturicus | Species | Iridaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO21654 | Cyerce cristallina | Species | Caliphyllidae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO15478 | Senna sophera | Species | Fabaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO3291 | Cynanchum auriculatum | Species | Apocynaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO21725 | Uncaria glabrata | Species | Rubiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO21343 | Eupatorium fortunei | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO26325 | Annulusmagnus triseptatus | Species | Annulatascaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO22499 | Corydalis flabellata | Species | Papaveraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO28103 | Erica carnea | Species | Ericaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO22048 | Pteris palmiformis | Species | Pteridaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO17911 | Blepharisma japonicum | Species | Blepharismidae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO15497 | Caria ino | Species | Riodinidae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO14262 | Eucalyptus polyanthemos | Species | Myrtaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO2377 | Cetraria ciliaris | Species | Parmeliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO23006 | Moringa stenopetala | Species | Moringaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO19965 | Helenium alternifolium | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO14240 | Justicia ghiesbreghtiana | Species | Acanthaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO22756 | Epimedium versicolor | Species | Berberidaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO21032 | Manilkara hexandra | Species | Sapotaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO8115 | Polyopes affinis | Species | Halymeniaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO22372 | Callicarpa bodinieri | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO20203 | Syringa komarowi | Species | Oleaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO13414 | Senecio fuertesii | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO27489 | Alloascoidea hylecoeti | Species | Alloascoideaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO22887 | Scutellaria violacea | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO20583 | Phaulopsis imbricata | Species | Acanthaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO20088 | Piper sintenense | Species | Piperaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO19580 | Chamaemelum fuscatum | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO21278 | Lysimachia clethroides | Species | Primulaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO21089 | Mourera fluviatilis | Species | Podostemaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO20381 | Echites hirsuta | Species | Apocynaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO21599 | Ricciocarpos natans | Species | Ricciaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO20835 | Medicago truncatula | Species | Fabaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO4984 | Salvia cana | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO22113 | Anthocercis genistoides | Species | Solanaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO22953 | Eupatorium pauciflorum | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO21158 | Viburnum fur | Species | Adoxaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO19638 | Scutellaria albida | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO4230 | Protoparmeliopsis peltata | Species | Lecanoraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO27929 | Aphanamixis polystachya | Species | Meliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO19522 | Arthropsis truncata | Species | n.a. | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO26131 | Cliona chilensis | Species | Clionaidae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO19311 | Dasymaschalon blumei | Species | Annonaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO17783 | Sideritis cystosiphon | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO20896 | Mimosa tenuiflora | Species | Fabaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO17362 | Alstonia yunnanensis | Species | Apocynaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO20522 | Pyura sacciformis | Species | Pyuridae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO20261 | Teucrium trifidum | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO16997 | Talaromyces aculeatus | Species | Trichocomaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO4478 | Parmelia pseudoreticulata | Species | Parmeliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO20457 | Spirastrella inconstans | Species | Spirastrellidae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO19891 | Diospyros crassiflora | Species | Ebenaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO17643 | Penicillium pedemontanum | Species | Aspergillaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO16990 | Verbesina virgata | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO21413 | Armillaria tabescens | Species | Physalacriaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO20967 | Doriopsilla albopunctata | Species | Dendrodorididae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO13974 | Hygrophorus pustulatus | Species | Hygrophoraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO22698 | Achillea pannonica | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO22308 | Stevia satureiaefolia | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO6696 | Chukrasia tabularis | Species | Meliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO18356 | Stachys tuberifera | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO16567 | Doriopsilla areolata | Species | Dendrodorididae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO19118 | Hippeastrum vittatum | Species | Amaryllidaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO4048 | Inga longispica | Species | Oecophoridae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO15763 | Huperzia lucidula | Species | Lycopodiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO18435 | Tylophora atrofolliculata | Species | Apocynaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO18606 | Achyrocline bogotensis | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO791 | Laburnum anagyroides | Species | Fabaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO19777 | Pholiota adiposa | Species | Strophariaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO1826 | Teucrium barbeyanum | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO20707 | Stillingia sanguinolenta | Species | Euphorbiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO22258 | Chrysanthemum indicum | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO60 | Neoshirakia japonica | Species | Euphorbiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO12148.2 | Acer pictum subsp. okamotoanum | Subspecies | Sapindaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO17119 | Dalea versicolor | Species | Fabaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO13832 | Aspilia hispida | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
Note for Reference:
In addition to directly collecting NP source organism data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated them from below databases:
☉ UNPD: Universal Natural Products Database [PMID: 23638153].
☉ StreptomeDB: a database of streptomycetes natural products [PMID: 33051671].
☉ TM-MC: a database of medicinal materials and chemical compounds in Northeast Asian traditional medicine [PMID: 26156871].
☉ TCM@Taiwan: a Traditional Chinese Medicine database [PMID: 21253603].
☉ TCMID: a Traditional Chinese Medicine database [PMID: 29106634].
☉ TCMSP: The traditional Chinese medicine systems pharmacology database and analysis platform [PMID: 24735618].
☉ HerDing: a herb recommendation system to treat diseases using genes and chemicals [PMID: 26980517].
☉ MetaboLights: a metabolomics database [PMID: 27010336].
☉ FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].
  NP Quantity Composition/Concentration| Organism ID | Organism Name | Organism Material Preparation | Organism Part | NP Quantity (Standard) | NP Quantity (Minimum) | NP Quantity (Maximum) | Quantity Unit | Reference |
|---|
Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP quantitative records for specific NP domains (e.g., NPS from foods or herbs) from domain-specific databases. These databases include:
☉ DUKE: Dr. Duke's Phytochemical and Ethnobotanical Databases.
☉ PHENOL EXPLORER: is the first comprehensive database on polyphenol content in foods [PMID: 24103452], its homepage can be accessed at here.
☉ FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].
Biological Activity
| Target ID | Target Type | Target Name | Target Organism | Activity Type | Activity Relation | Value | Unit | Reference |
|---|---|---|---|---|---|---|---|---|
| NPT67 | Individual protein | Cholinesterase | Equus caballus | IC50 | = | 455800.0 | nM | PMID[17067156] |
| Target ID | Target Type | Target Name | Target Organism | Activity Type | Activity Relation | Value | Unit | Reference |
|---|---|---|---|---|---|---|---|---|
| NPT34 | Cell line | BV-2 | Mus musculus | IC50 | = | 62200.0 | nM | PMID[27989668] |
| NPT564 | Organism | Listeria monocytogenes | Listeria monocytogenes | Inhibition | = | 8.7 | % | PMID[33378620] |
| NPT564 | Organism | Listeria monocytogenes | Listeria monocytogenes | Inhibition | = | 17.8 | % | PMID[33378620] |
| NPT19 | Organism | Escherichia coli | Escherichia coli | Inhibition | = | 45.4 | % | PMID[33378620] |
| NPT16 | Organism | Staphylococcus aureus | Staphylococcus aureus | Inhibition | = | 0.0 | % | PMID[33378620] |
| NPT18 | Organism | Pseudomonas aeruginosa | Pseudomonas aeruginosa | Inhibition | = | 39.8 | % | PMID[33378620] |
| NPT19 | Organism | Escherichia coli | Escherichia coli | Inhibition | = | 37.5 | % | PMID[33378620] |
| NPT18 | Organism | Pseudomonas aeruginosa | Pseudomonas aeruginosa | Inhibition | = | 40.0 | % | PMID[33378620] |
| NPT19 | Organism | Escherichia coli | Escherichia coli | Inhibition | = | 3.2 | % | PMID[33378620] |
| NPT19 | Organism | Escherichia coli | Escherichia coli | Inhibition | = | 1.6 | % | PMID[33378620] |
| Target ID | Target Type | Target Name | Target Organism | Activity Type | Activity Relation | Value | Unit | Reference |
|---|
Experimental ADME
| Experiment Model | Experiment Tissue | ADME Type | ADME Relation | ADME Value | ADME Unit | Reference |
|---|
Experimental Toxicity
| Experiment Model | Experiment Organism | Toxicity Type | Toxicity Relation | Toxicity Value | Toxicity Unit | Reference |
|---|
Common Abbreviations:
LC: Lethal Concentration; LD: Lethal Dose; LT:Lethal Time; NOAEL: No-observed-adverse-effect Level; BMDL: Benchmark Dose Lower Confidence Limit; BMD: Benchmark Dose; BMC:Benchmark Concentration; LOAEL: Lowest Observed Adverse Effect Level; RfD:Reference Dose; RfC:Reference Concentration; MRL: Minimal Risk Level; MEG: Maximum Exposure Guideline; PAC: Protective Action Criteria
| Hepatotoxicity | Carcinogenicity | Mutagenicity | Cardiotoxicity | Respiratory Toxicity | Eye Irritation | Endocrine Disruption |
|---|---|---|---|---|---|---|
|
|
|
|
|
|
|
Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP toxicity records from domain-specific databases. These databases include:
☉ ToxValDB: a curated database that compiles quantitative toxicity values for chemicals from diverse public sources to support toxicological research and risk assessment.
☉ TOXRIC: a comprehensive, free-to-access, online database providing toxicological/feature data. The toxicity labels are retrieved from this database. [PMID: 36400569]
  Chemically structural similarityTop-200 similar NPs were calculated against the active-NP-set (includes approximately 50,000 NPs with experimentally-derived bioactivity available in NPASS)
Similarity is measured using the Tanimoto coefficient (Tc) , which compares the binary fingerprints of two molecules. Tc is calculated as the intersection divided by the union of '1' bits in the fingerprints, ranging from 0 to 1, with 1 indicating highest similarity.
●  The left chart: Distribution of similarity level between NPC249078 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.5 or Top200).
Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.
●  The left chart: Distribution of similarity level between NPC249078 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.5 or Top200).
| Similarity Score | Similarity Level | Drug ID | Developmental Stage |
|---|---|---|---|
| NPD |
  Bioactivity similaritySimilarity level is defined by Bioactivity similarity was calculated based on bioactivity descriptors of compounds. The bioactivity descriptors were calculated by a recently developed AI algorithm Chemical Checker (CC) [Nature Biotechnology, 38:1087–1096, 2020; Nature Communications, 12:3932, 2021], which evaluated bioactivity similarities at five levels:
☉ A: chemistry similarity;
☉ B: biological targets similarity;
☉ C: networks similarity;
☉ D: cell-based bioactivity similarity;
☉ E: similarity based on clinical data.
Those 5 categories of CC bioactivity descriptors were calculated and then subjected to manifold projection using UMAP algorithm, to project all NPs on a 2-Dimensional space. The current NP was highlighted with a small circle in the 2-D map. Below figures: left-to-right, A-to-E.
