Natural Product: NPC178638| Natural Product ID | NPC178638 |
|
Common Name
The InCHIKey will be temporarily assigned as the "Common Name" if no IUPAC name or alternative short name is available.
| FMFCRRDJQXJLBD-CSKARUKUSA-N |
| IUPAC Name | n.a. |
| Synonyms | |
| Synthetic Gene Cluster | n.a. |
| ChEMBL Identifier | n.a. |
| PubChem CID |
24832062 |
| Chemical Classification |
|
The Chemical Classification was calculated by Classyfire, a software for chemical taxonomy calculation. Reference: DOI:10.1186/s13321-016-0174-y.
Chemical Representations
| Standard InCHIKey | FMFCRRDJQXJLBD-CSKARUKUSA-N |
| Standard InCHI | InChI=1S/C11H18O2/c1-9(2)6-5-7-10(3)8-13-11(4)12/h6,8H,5,7H2,1-4H3/b10-8+ |
| SMILES | CC(=CCC/C(=C/OC(=O)C)/C)C |
  Calculated Properties| Molecular Weight:   | 182.13 | Volume:   | 208.483 Van der Waals volume.
|
| Dense:   | 0.874 | LogP:   | 3.324 The logarithm of the n-octanol/water distribution coefficients.
|
| logD7.4:   | 2.781 The logarithm of the n-octanol/water distribution coefficient at pH=7.4.
|
LogS:   | -2.958 The logarithm of aqueous solubility value.
|
| Rotatable Bonds:   | 5.0 | Rigid Bonds:   | 3.0 |
| TPSA:   | 26.3 Topological Polar Surface Area.
|
H-Bond Acceptor:   | 2.0 |
| H-Bond Donor:   | 0.0 | Rings:   | 0.0 |
| Heavy Atoms:   | 2.0 |
| QED Drug-Likeness Score:   | 0.379 | GASA:   | 0.0 GASA represents the probability of being difficult to synthesize, ranging from 0 to 1.
|
| Synthetic Accessibility Score:   | 2.924 | Fsp3:   | 0.545 |
| MCE-18:   | 0.0 MCE-18 stands for medicinal chemistry evolution.MCE-18≥45 is considered a suitable value.
|
Lipinski Rule-of-5:   | Rejected |
| Pfizer Rule:   | Accepted | GSK Rule:   | Rejected |
| Golden Triangle Rule:   | Accepted | BMS Rule:   | 0 |
| Chelating Alert:   | 0 | PAINS Alert:   | 0 |
| Colloidal aggregators:   | 0.009 | Fluc inhibitor:   | 0.007 The fluc inhibitor value is the probability of being fLuc inhibitors, within the range of 0 to 1.
|
| Blue fluorescence:   | 0.002 The blue fluorescence value is the probability of being blue fluorescence, within the range of 0 to 1
|
Green fluorescence:   | 0.001 The green fluorescence value is the probability of being green fluorescence, within the range of 0 to 1
|
| Reactive compounds:   | 0.999 | Promiscuous compounds:   | 0.046 |
| Caco-2 Permeability:   | -4.462 | MDCK Permeability:   | -4.712 |
| Pgp-inhibitor:   | 0.873 | Pgp-substrate:   | 0.15 |
| PAMPA:   |
0.154 The experimental data for Peff was logarithmically transformed (logPeff). Molecules with log Peff values below 2.0 were classified as low-permeability (Category 0), while those with log Peff values exceeding 2.5 were classified as high-permeability (Category 1).
|
Human Intestinal Absorption (HIA):   | 0.041 |
| 20% Bioavailability (F20%):   | 0.094 | 30% Bioavailability (F30%):   | 0.183 |
| 50% Bioavailability (F50%):   | 0.751 |
| Blood-Brain-Barrier Penetration (BBB):   | 0.296 | MRP1:   | 0.973 |
| Plasma Protein Binding (PPB):   | 88.199% | Volume Distribution (VD):   | -0.078 |
| Fu: |
12.843% The fraction unbound in plasms.
|
OATP1B1 inhibitor:   | 0.952 |
| OATP1B3 inhibitor:   | 0.749 | BCRP inhibitor:   | 0.171 |
| BSEP inhibitor:   | 0.824 |
| CYP1A2-inhibitor:   | 0.333 | CYP1A2-substrate:   | 0.736 |
| CYP2C19-inhibitor:   | 0.942 | CYP2C19-substrate:   | 0.011 |
| CYP2C9-inhibitor:   | 0.066 | CYP2C9-substrate:   | 0.147 |
| CYP2D6-inhibitor:   | 0.32 | CYP2D6-substrate:   | 0.078 |
| CYP3A4-inhibitor:   | 0.05 | CYP3A4-substrate:   | 0.595 |
| CYP2B6-substrate:   | 0.009 | CYP2C8-inhibitor:   | 0.215 |
| HLM stability:   |
0.844 Human liver microsomal (HLM) stability. Category 0: stable+ (HLM > 30 min); Category 1: unstable- (HLM ≤ 30 min). The output value is the probability of human liver microsomal instability, where a value closer to 1 indicates a higher likelihood of instability.
|
| Clearance (CL):   | 5.414 | Half-life (T1/2):   | 0.929 |
| hERG Blockers:   | 0.052 | hERG Blockers (10um):   | 0.382 |
| Human Hepatotoxicity (H-HT):   | 0.484 | Drug-induced Liver Injury (DILI):   | 0.302 |
| AMES Toxicity:   | 0.298 | Rat Oral Acute Toxicity:   | 0.339 |
| Maximum Recommended Daily Dose:   | 0.142 | Skin Sensitization:   | 0.938 |
| Carcinogencity:   | 0.535 | Eye Corrosion:   | 0.808 |
| Eye Irritation:   | 0.974 | Respiratory Toxicity:   | 0.525 |
| Drug-induced Neurotoxicity:   | 0.467 | Ototoxicity:   | 0.242 |
| Hematotoxicity:   | 0.42 | Drug-induced Nephrotoxicity:   | 0.305 |
| Genotoxicity:   | 0.091 | RPMI-8226 Immunitoxicity:   | 0.044 |
| A549 Cytotoxicity:   | 0.075 | Hek293 Cytotoxicity:   | 0.062 |
| BCF:   |
1.987 Bioconcentration factors are used for considering secondary poisoning potential and assessing risks to human health via the food chain. The unit is -log10[(mg/L)/(1000*MW)].
|
IGC50:   |
4.386 48 hour Tetrahymena pyriformis IGC50. The unit of IGC50 is -log10[(mg/L)/(1000*MW)].
|
| LC50DM:   |
5.909 48 hour Daphnia magna LC50. The unit of LC50DM is -log10[(mg/L)/(1000*MW)].
|
LC50FM:   |
5.43 96 hour fathead minnow LC50. The unit of LC50FM is -log10[(mg/L)/(1000*MW)].
|
  Species Source| Organism ID | Organism Name | Taxonomy Level | Family | SuperKingdom | Isolation Part | Collection Location | Collection Time | Reference |
|---|---|---|---|---|---|---|---|---|
| NPO1515 | Lonicera japonica | Species | Caprifoliaceae | Eukaryota | Flowers | n.a. | n.a. | DOI[10.1002/elan.200403102] |
| NPO1515 | Lonicera japonica | Species | Caprifoliaceae | Eukaryota | Flowers | n.a. | n.a. | DOI[10.1016/j.foodchem.2012.02.124] |
| NPO1524 | Rosa rugosa | Species | Rosaceae | Eukaryota | Flowers | n.a. | n.a. | DOI[10.1016/j.foodcont.2014.02.001] |
| NPO29401 | Bupleurum chinense | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | DOI[10.1016/j.indcrop.2008.08.002] |
| NPO7103 | Allium sativum | Species | Amaryllidaceae | Eukaryota | n.a. | n.a. | n.a. | DOI[10.1016/j.indcrop.2020.113007] |
| NPO20553 | Zingiber officinale | Species | Zingiberaceae | Eukaryota | n.a. | n.a. | n.a. | DOI[10.1016/j.jarmap.2018.11.004] |
| NPO319 | Citrus limon | Species | Rutaceae | Eukaryota | n.a. | n.a. | n.a. | DOI[10.1016/S0031-9422(99)00119-3] |
| NPO29515 | Laurus nobilis | Species | Lauraceae | Eukaryota | n.a. | leaf | n.a. | DOI[10.1080/10412905.2001.9699624] |
| NPO22230 | Rhodiola crenulata | Species | Crassulaceae | Eukaryota | n.a. | n.a. | n.a. | DOI[10.1111/j.1600-079X.2010.00817.x] |
| NPO7103 | Allium sativum | Species | Amaryllidaceae | Eukaryota | n.a. | n.a. | n.a. | DOI[10.3923/pjbs.2013.1138.1144] |
| NPO319 | Citrus limon | Species | Rutaceae | Eukaryota | n.a. | fruit | n.a. |
PMID[10606547] |
| NPO1515 | Lonicera japonica | Species | Caprifoliaceae | Eukaryota | Flowers | n.a. | n.a. |
PMID[11077184] |
| NPO22234 | Ficus carica | Species | Moraceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[11473446] |
| NPO29515 | Laurus nobilis | Species | Lauraceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[11912066] |
| NPO29515 | Laurus nobilis | Species | Lauraceae | Eukaryota | n.a. | leaf | n.a. |
PMID[12419922] |
| NPO29169 | Origanum vulgare | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[16249088] |
| NPO8187 | Schisandra chinensis | Species | Schisandraceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[16562834] |
| NPO7103 | Allium sativum | Species | Amaryllidaceae | Eukaryota | n.a. | leaf | n.a. |
PMID[17262437] |
| NPO1515 | Lonicera japonica | Species | Caprifoliaceae | Eukaryota | Flowers | n.a. | n.a. |
PMID[17328234] |
| NPO20553 | Zingiber officinale | Species | Zingiberaceae | Eukaryota | rhizomes | n.a. | n.a. |
PMID[18177011] |
| NPO1515 | Lonicera japonica | Species | Caprifoliaceae | Eukaryota | Flower buds | n.a. | n.a. |
PMID[18321056] |
| NPO7103 | Allium sativum | Species | Amaryllidaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[18326559] |
| NPO7103 | Allium sativum | Species | Amaryllidaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[18460139] |
| NPO20553 | Zingiber officinale | Species | Zingiberaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[19271742] |
| NPO11871 | Illicium difengpi | Species | Schisandraceae | Eukaryota | stem bark | n.a. | n.a. |
PMID[20411974] |
| NPO1524 | Rosa rugosa | Species | Rosaceae | Eukaryota | Flowers | n.a. | n.a. |
PMID[20467822] |
| NPO20553 | Zingiber officinale | Species | Zingiberaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[20590154] |
| NPO29169 | Origanum vulgare | Species | Lamiaceae | Eukaryota | n.a. | aerial part | n.a. |
PMID[20973550] |
| NPO29515 | Laurus nobilis | Species | Lauraceae | Eukaryota | n.a. | leaf | n.a. |
PMID[21188975] |
| NPO11100 | Artemisia capillaris | Species | Asteraceae | Eukaryota | n.a. | whole plant | n.a. |
PMID[21428416] |
| NPO1515 | Lonicera japonica | Species | Caprifoliaceae | Eukaryota | n.a. | flower | n.a. |
PMID[21804227] |
| NPO1515 | Lonicera japonica | Species | Caprifoliaceae | Eukaryota | n.a. | flower bud | n.a. |
PMID[21942812] |
| NPO1515 | Lonicera japonica | Species | Caprifoliaceae | Eukaryota | flower buds | Henan province, China | 2005-MAY |
PMID[21942812] |
| NPO11100 | Artemisia capillaris | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[22870812] |
| NPO7103 | Allium sativum | Species | Amaryllidaceae | Eukaryota | Essential oil | n.a. | n.a. |
PMID[23163425] |
| NPO1515 | Lonicera japonica | Species | Caprifoliaceae | Eukaryota | n.a. | leaf | n.a. |
PMID[23265495] |
| NPO11100 | Artemisia capillaris | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[23435948] |
| NPO7103 | Allium sativum | Species | Amaryllidaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[23865201] |
| NPO1524 | Rosa rugosa | Species | Rosaceae | Eukaryota | flower buds | n.a. | n.a. |
PMID[24063567] |
| NPO8187 | Schisandra chinensis | Species | Schisandraceae | Eukaryota | n.a. | fruit | n.a. |
PMID[24155209] |
| NPO1515 | Lonicera japonica | Species | Caprifoliaceae | Eukaryota | Flower buds | n.a. | n.a. |
PMID[24279769] |
| NPO2715 | Murraya paniculata | Species | Rutaceae | Eukaryota | n.a. | leaf | n.a. |
PMID[24354205] |
| NPO2715 | Murraya paniculata | Species | Rutaceae | Eukaryota | n.a. | twig | n.a. |
PMID[24354205] |
| NPO1524 | Rosa rugosa | Species | Rosaceae | Eukaryota | Roots | n.a. | n.a. |
PMID[24461297] |
| NPO7103 | Allium sativum | Species | Amaryllidaceae | Eukaryota | n.a. | bulb | n.a. |
PMID[24508058] |
| NPO8187 | Schisandra chinensis | Species | Schisandraceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[24959987] |
| NPO8187 | Schisandra chinensis | Species | Schisandraceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[25302569] |
| NPO7103 | Allium sativum | Species | Amaryllidaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[25650289] |
| NPO7103 | Allium sativum | Species | Amaryllidaceae | Eukaryota | garlic skin | n.a. | n.a. |
PMID[25726329] |
| NPO11100 | Artemisia capillaris | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[25737008] |
| NPO29401 | Bupleurum chinense | Species | Apiaceae | Eukaryota | roots | n.a. | n.a. |
PMID[26259802] |
| NPO26335 | Carpesium abrotanoides | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[26316467] |
| NPO29169 | Origanum vulgare | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[30792999] |
| NPO29515 | Laurus nobilis | Species | Lauraceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[30813368] |
| NPO20553 | Zingiber officinale | Species | Zingiberaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[32872604] |
| NPO21355 | Elsholtzia ciliata | Species | Lamiaceae | Eukaryota | Aerial Parts | n.a. | n.a. |
PMID[32991171] |
| NPO30289 | Rosa damascena | Species | Rosaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[33861759] |
| NPO1524 | Rosa rugosa | Species | Rosaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[34332066] |
| NPO2715 | Murraya paniculata | Species | Rutaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[34964904] |
| NPO319 | Citrus limon | Species | Rutaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[35143705] |
| NPO29169 | Origanum vulgare | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[35264638] |
| NPO29169 | Origanum vulgare | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[35608311] |
| NPO29169 | Origanum vulgare | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[36235238] |
| NPO20553 | Zingiber officinale | Species | Zingiberaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[36352904] |
| NPO319 | Citrus limon | Species | Rutaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[36378844] |
| NPO2715 | Murraya paniculata | Species | Rutaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[36529712] |
| NPO29169 | Origanum vulgare | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[36840093] |
| NPO29169 | Origanum vulgare | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[37049808] |
| NPO29169 | Origanum vulgare | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[37175125] |
| NPO7103 | Allium sativum | Species | Amaryllidaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[37241721] |
| NPO30289 | Rosa damascena | Species | Rosaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[38005389] |
| NPO319 | Citrus limon | Species | Rutaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[38139796] |
| NPO29169 | Origanum vulgare | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[38474654] |
| NPO319 | Citrus limon | Species | Rutaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[38498554] |
| NPO18681 | Artemisia scoparia | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[38538562] |
| NPO18681 | Artemisia scoparia | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[38542997] |
| NPO29169 | Origanum vulgare | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[38695450] |
| NPO29515 | Laurus nobilis | Species | Lauraceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[38695450] |
| NPO29515 | Laurus nobilis | Species | Lauraceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[38851735] |
| NPO29169 | Origanum vulgare | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[39520005] |
| NPO20553 | Zingiber officinale | Species | Zingiberaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[39679248] |
| NPO20553 | Zingiber officinale | Species | Zingiberaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[39680258] |
| NPO20553 | Zingiber officinale | Species | Zingiberaceae | Eukaryota | n.a. | rhizome | n.a. |
PMID[8064299] |
| NPO20553 | Zingiber officinale | Species | Zingiberaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[8064299] |
| NPO7103 | Allium sativum | Species | Amaryllidaceae | Eukaryota | n.a. | n.a. | n.a. |
PMID[8350088] |
| NPO29401 | Bupleurum chinense | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[Article] |
| NPO7103 | Allium sativum | Species | Amaryllidaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO319 | Citrus limon | Species | Rutaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO22234 | Ficus carica | Species | Moraceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO1515 | Lonicera japonica | Species | Caprifoliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO29169 | Origanum vulgare | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO20553 | Zingiber officinale | Species | Zingiberaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO1524 | Rosa rugosa | Species | Rosaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO21343 | Eupatorium fortunei | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO11100 | Artemisia capillaris | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO29401 | Bupleurum chinense | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO15730 | Citrus medica | Species | Rutaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO15730.2 | Citrus medica var. sarcodactylis | Varieties | Rutaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO20513 | Codium fragile | Species | Codiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO12441 | Cymbopogon distans | Species | Poaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO21355 | Elsholtzia ciliata | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO18313 | Erodium stephanianum | Species | Geraniaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO11871 | Illicium difengpi | Species | Schisandraceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO29515 | Laurus nobilis | Species | Lauraceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO30851 | Magnolia liliflora | Species | Magnoliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO13730 | Magnolia liliiflora | Species | Magnoliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO16307 | Murraya kwangsiensis | Species | Rutaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO2715 | Murraya paniculata | Species | Rutaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO22230 | Rhodiola crenulata | Species | Crassulaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO30289 | Rosa damascena | Species | Rosaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO6211 | Rosa gallica | Species | Rosaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO10557 | Rosa x damascena | Species | Rosaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO8187 | Schisandra chinensis | Species | Schisandraceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO13291 | Changium smyrnioides | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO163.1 | Daucus carota var. sativa | Varieties | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO18681 | Artemisia scoparia | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO27645 | Fructus galangae | n.a. | n.a. | n.a. | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO26335 | Carpesium abrotanoides | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO6565 | Cymbopogon goeringii | Species | Poaceae | Eukaryota | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO9394 | Herba artemisiae scopariae | n.a. | n.a. | n.a. | n.a. | n.a. | n.a. | Database[COCONUT] |
| NPO319 | Citrus limon | Species | Rutaceae | Eukaryota | n.a. | n.a. | Database[FooDB] | |
| NPO7103 | Allium sativum | Species | Amaryllidaceae | Eukaryota | n.a. | n.a. | Database[FooDB] | |
| NPO22234 | Ficus carica | Species | Moraceae | Eukaryota | n.a. | n.a. | Database[FooDB] | |
| NPO20553 | Zingiber officinale | Species | Zingiberaceae | Eukaryota | n.a. | n.a. | Database[FooDB] | |
| NPO7103 | Allium sativum | Species | Amaryllidaceae | Eukaryota | Bulb | n.a. | n.a. | Database[FooDB] |
| NPO319 | Citrus limon | Species | Rutaceae | Eukaryota | Essential Oil | n.a. | n.a. | Database[FooDB] |
| NPO319 | Citrus limon | Species | Rutaceae | Eukaryota | Flower | n.a. | n.a. | Database[FooDB] |
| NPO7103 | Allium sativum | Species | Amaryllidaceae | Eukaryota | Flower | n.a. | n.a. | Database[FooDB] |
| NPO29515 | Laurus nobilis | Species | Lauraceae | Eukaryota | Fruit | n.a. | n.a. | Database[FooDB] |
| NPO22234 | Ficus carica | Species | Moraceae | Eukaryota | Fruit | n.a. | n.a. | Database[FooDB] |
| NPO319 | Citrus limon | Species | Rutaceae | Eukaryota | Fruit | n.a. | n.a. | Database[FooDB] |
| NPO22234 | Ficus carica | Species | Moraceae | Eukaryota | Latex Exudate | n.a. | n.a. | Database[FooDB] |
| NPO29515 | Laurus nobilis | Species | Lauraceae | Eukaryota | Leaf | n.a. | n.a. | Database[FooDB] |
| NPO29169 | Origanum vulgare | Species | Lamiaceae | Eukaryota | Leaf | n.a. | n.a. | Database[FooDB] |
| NPO22234 | Ficus carica | Species | Moraceae | Eukaryota | Leaf | n.a. | n.a. | Database[FooDB] |
| NPO7103 | Allium sativum | Species | Amaryllidaceae | Eukaryota | Leaf | n.a. | n.a. | Database[FooDB] |
| NPO319 | Citrus limon | Species | Rutaceae | Eukaryota | Leaf Essent. Oil | n.a. | n.a. | Database[FooDB] |
| NPO29169 | Origanum vulgare | Species | Lamiaceae | Eukaryota | Plant | n.a. | n.a. | Database[FooDB] |
| NPO319 | Citrus limon | Species | Rutaceae | Eukaryota | Plant | n.a. | n.a. | Database[FooDB] |
| NPO20553 | Zingiber officinale | Species | Zingiberaceae | Eukaryota | Plant | n.a. | n.a. | Database[FooDB] |
| NPO7103 | Allium sativum | Species | Amaryllidaceae | Eukaryota | Plant | n.a. | n.a. | Database[FooDB] |
| NPO20553 | Zingiber officinale | Species | Zingiberaceae | Eukaryota | Resin, Exudate, Sap | n.a. | n.a. | Database[FooDB] |
| NPO20553 | Zingiber officinale | Species | Zingiberaceae | Eukaryota | Rhizome | n.a. | n.a. | Database[FooDB] |
| NPO20553 | Zingiber officinale | Species | Zingiberaceae | Eukaryota | Root | n.a. | n.a. | Database[FooDB] |
| NPO7103 | Allium sativum | Species | Amaryllidaceae | Eukaryota | Root | n.a. | n.a. | Database[FooDB] |
| NPO22234 | Ficus carica | Species | Moraceae | Eukaryota | Seed | n.a. | n.a. | Database[FooDB] |
| NPO7103 | Allium sativum | Species | Amaryllidaceae | Eukaryota | Shoot | n.a. | n.a. | Database[FooDB] |
| NPO29169 | Origanum vulgare | Species | Lamiaceae | Eukaryota | Shoot Essent. Oil | n.a. | n.a. | Database[FooDB] |
| NPO29169 | Origanum vulgare | Species | Lamiaceae | Eukaryota | n.a. | n.a. | Database[FooDB] | |
| NPO29515 | Laurus nobilis | Species | Lauraceae | Eukaryota | n.a. | n.a. | Database[FooDB] | |
| NPO20553 | Zingiber officinale | Species | Zingiberaceae | Eukaryota | n.a. | n.a. | Database[FooDB] | |
| NPO22234 | Ficus carica | Species | Moraceae | Eukaryota | Fruits | n.a. | Database[FooDB] | |
| NPO29515 | Laurus nobilis | Species | Lauraceae | Eukaryota | n.a. | n.a. | Database[FooDB] | |
| NPO319 | Citrus limon | Species | Rutaceae | Eukaryota | n.a. | n.a. | Database[FooDB] | |
| NPO7103 | Allium sativum | Species | Amaryllidaceae | Eukaryota | n.a. | n.a. | Database[FooDB] | |
| NPO21343 | Eupatorium fortunei | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO30851 | Magnolia liliflora | Species | Magnoliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO11100 | Artemisia capillaris | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO2715 | Murraya paniculata | Species | Rutaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO18681 | Artemisia scoparia | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO15730 | Citrus medica | Species | Rutaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO1515 | Lonicera japonica | Species | Caprifoliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO8187 | Schisandra chinensis | Species | Schisandraceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO29401 | Bupleurum chinense | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO22234 | Ficus carica | Species | Moraceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO7103 | Allium sativum | Species | Amaryllidaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO20553 | Zingiber officinale | Species | Zingiberaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO21355 | Elsholtzia ciliata | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO319 | Citrus limon | Species | Rutaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO20513 | Codium fragile | Species | Codiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO163.1 | Daucus carota var. sativa | Varieties | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO1524 | Rosa rugosa | Species | Rosaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO12441 | Cymbopogon distans | Species | Poaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO26335 | Carpesium abrotanoides | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO22230 | Rhodiola crenulata | Species | Crassulaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO29515 | Laurus nobilis | Species | Lauraceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO11871 | Illicium difengpi | Species | Schisandraceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO29169 | Origanum vulgare | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO6565 | Cymbopogon goeringii | Species | Poaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO30289 | Rosa damascena | Species | Rosaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO27645 | Fructus galangae | n.a. | n.a. | n.a. | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO15730.2 | Citrus medica var. sarcodactylis | Varieties | Rutaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO6211 | Rosa gallica | Species | Rosaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO13291 | Changium smyrnioides | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO16307 | Murraya kwangsiensis | Species | Rutaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO18313 | Erodium stephanianum | Species | Geraniaceae | Eukaryota | n.a. | n.a. | n.a. | Database[HerDing] |
| NPO20553 | Zingiber officinale | Species | Zingiberaceae | Eukaryota | n.a. | n.a. | Database[Phenol-Explorer] | |
| NPO319 | Citrus limon | Species | Rutaceae | Eukaryota | n.a. | n.a. | Database[Phenol-Explorer] | |
| NPO319 | Citrus limon | Species | Rutaceae | Eukaryota | Fruits | n.a. | Database[Phenol-Explorer] | |
| NPO7103 | Allium sativum | Species | Amaryllidaceae | Eukaryota | n.a. | n.a. | Database[Phenol-Explorer] | |
| NPO22230 | Rhodiola crenulata | Species | Crassulaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO20513 | Codium fragile | Species | Codiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO1515 | Lonicera japonica | Species | Caprifoliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO15730.2 | Citrus medica var. sarcodactylis | Varieties | Rutaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO8187 | Schisandra chinensis | Species | Schisandraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO11100 | Artemisia capillaris | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO7103 | Allium sativum | Species | Amaryllidaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO21343 | Eupatorium fortunei | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO20553 | Zingiber officinale | Species | Zingiberaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO319 | Citrus limon | Species | Rutaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO22234 | Ficus carica | Species | Moraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO18681 | Artemisia scoparia | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO29401 | Bupleurum chinense | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO9394 | Herba artemisiae scopariae | n.a. | n.a. | n.a. | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO13291 | Changium smyrnioides | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO26335 | Carpesium abrotanoides | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO2715 | Murraya paniculata | Species | Rutaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO11871 | Illicium difengpi | Species | Schisandraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO15730 | Citrus medica | Species | Rutaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO1524 | Rosa rugosa | Species | Rosaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO29515 | Laurus nobilis | Species | Lauraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO13730 | Magnolia liliiflora | Species | Magnoliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO21355 | Elsholtzia ciliata | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO16307 | Murraya kwangsiensis | Species | Rutaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO27645 | Fructus galangae | n.a. | n.a. | n.a. | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO6211 | Rosa gallica | Species | Rosaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO163.1 | Daucus carota var. sativa | Varieties | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO29169 | Origanum vulgare | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO12441 | Cymbopogon distans | Species | Poaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO6565 | Cymbopogon goeringii | Species | Poaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO18313 | Erodium stephanianum | Species | Geraniaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO10557 | Rosa x damascena | Species | Rosaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCMID] |
| NPO15730 | Citrus medica | Species | Rutaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO20553 | Zingiber officinale | Species | Zingiberaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO22234 | Ficus carica | Species | Moraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO8187 | Schisandra chinensis | Species | Schisandraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO18681 | Artemisia scoparia | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO29401 | Bupleurum chinense | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO1524 | Rosa rugosa | Species | Rosaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO7103 | Allium sativum | Species | Amaryllidaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO21343 | Eupatorium fortunei | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO2715 | Murraya paniculata | Species | Rutaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO1515 | Lonicera japonica | Species | Caprifoliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO26335 | Carpesium abrotanoides | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO15730.2 | Citrus medica var. sarcodactylis | Varieties | Rutaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO319 | Citrus limon | Species | Rutaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO29515 | Laurus nobilis | Species | Lauraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO20513 | Codium fragile | Species | Codiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO11100 | Artemisia capillaris | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO21355 | Elsholtzia ciliata | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO29169 | Origanum vulgare | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO18313 | Erodium stephanianum | Species | Geraniaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO11871 | Illicium difengpi | Species | Schisandraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO30851 | Magnolia liliflora | Species | Magnoliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO12441 | Cymbopogon distans | Species | Poaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO16307 | Murraya kwangsiensis | Species | Rutaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO22230 | Rhodiola crenulata | Species | Crassulaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TCM_Taiwan] |
| NPO7103 | Allium sativum | Species | Amaryllidaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO11100 | Artemisia capillaris | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO20553 | Zingiber officinale | Species | Zingiberaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO11871 | Illicium difengpi | Species | Schisandraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO29401 | Bupleurum chinense | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO15730 | Citrus medica | Species | Rutaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO8187 | Schisandra chinensis | Species | Schisandraceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO2715 | Murraya paniculata | Species | Rutaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO21355 | Elsholtzia ciliata | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO1515 | Lonicera japonica | Species | Caprifoliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO1524 | Rosa rugosa | Species | Rosaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO13291 | Changium smyrnioides | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO18313 | Erodium stephanianum | Species | Geraniaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO22230 | Rhodiola crenulata | Species | Crassulaceae | Eukaryota | n.a. | n.a. | n.a. | Database[TM-MC] |
| NPO29169 | Origanum vulgare | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO1515 | Lonicera japonica | Species | Caprifoliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO21343 | Eupatorium fortunei | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO1524 | Rosa rugosa | Species | Rosaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO18681 | Artemisia scoparia | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO20513 | Codium fragile | Species | Codiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO7103 | Allium sativum | Species | Amaryllidaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO15730 | Citrus medica | Species | Rutaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO29401 | Bupleurum chinense | Species | Apiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO29515 | Laurus nobilis | Species | Lauraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO319 | Citrus limon | Species | Rutaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO22234 | Ficus carica | Species | Moraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO16307 | Murraya kwangsiensis | Species | Rutaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO11100 | Artemisia capillaris | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO26335 | Carpesium abrotanoides | Species | Asteraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO8187 | Schisandra chinensis | Species | Schisandraceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO22230 | Rhodiola crenulata | Species | Crassulaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO21355 | Elsholtzia ciliata | Species | Lamiaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO6211 | Rosa gallica | Species | Rosaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO13730 | Magnolia liliiflora | Species | Magnoliaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO18313 | Erodium stephanianum | Species | Geraniaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO10557 | Rosa x damascena | Species | Rosaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
| NPO2715 | Murraya paniculata | Species | Rutaceae | Eukaryota | n.a. | n.a. | n.a. | Database[UNPD] |
Note for Reference:
In addition to directly collecting NP source organism data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated them from below databases:
☉ UNPD: Universal Natural Products Database [PMID: 23638153].
☉ StreptomeDB: a database of streptomycetes natural products [PMID: 33051671].
☉ TM-MC: a database of medicinal materials and chemical compounds in Northeast Asian traditional medicine [PMID: 26156871].
☉ TCM@Taiwan: a Traditional Chinese Medicine database [PMID: 21253603].
☉ TCMID: a Traditional Chinese Medicine database [PMID: 29106634].
☉ TCMSP: The traditional Chinese medicine systems pharmacology database and analysis platform [PMID: 24735618].
☉ HerDing: a herb recommendation system to treat diseases using genes and chemicals [PMID: 26980517].
☉ MetaboLights: a metabolomics database [PMID: 27010336].
☉ FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].
  NP Quantity Composition/Concentration| Organism ID | Organism Name | Organism Material Preparation | Organism Part | NP Quantity (Standard) | NP Quantity (Minimum) | NP Quantity (Maximum) | Quantity Unit | Reference |
|---|
Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP quantitative records for specific NP domains (e.g., NPS from foods or herbs) from domain-specific databases. These databases include:
☉ DUKE: Dr. Duke's Phytochemical and Ethnobotanical Databases.
☉ PHENOL EXPLORER: is the first comprehensive database on polyphenol content in foods [PMID: 24103452], its homepage can be accessed at here.
☉ FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].
Biological Activity
| Target ID | Target Type | Target Name | Target Organism | Activity Type | Activity Relation | Value | Unit | Reference |
|---|
| Target ID | Target Type | Target Name | Target Organism | Activity Type | Activity Relation | Value | Unit | Reference |
|---|
| Target ID | Target Type | Target Name | Target Organism | Activity Type | Activity Relation | Value | Unit | Reference |
|---|
Experimental ADME
| Experiment Model | Experiment Tissue | ADME Type | ADME Relation | ADME Value | ADME Unit | Reference |
|---|
Experimental Toxicity
| Experiment Model | Experiment Organism | Toxicity Type | Toxicity Relation | Toxicity Value | Toxicity Unit | Reference |
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Common Abbreviations:
LC: Lethal Concentration; LD: Lethal Dose; LT:Lethal Time; NOAEL: No-observed-adverse-effect Level; BMDL: Benchmark Dose Lower Confidence Limit; BMD: Benchmark Dose; BMC:Benchmark Concentration; LOAEL: Lowest Observed Adverse Effect Level; RfD:Reference Dose; RfC:Reference Concentration; MRL: Minimal Risk Level; MEG: Maximum Exposure Guideline; PAC: Protective Action Criteria
| Hepatotoxicity | Carcinogenicity | Mutagenicity | Cardiotoxicity | Respiratory Toxicity | Eye Irritation | Endocrine Disruption |
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Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP toxicity records from domain-specific databases. These databases include:
☉ ToxValDB: a curated database that compiles quantitative toxicity values for chemicals from diverse public sources to support toxicological research and risk assessment.
☉ TOXRIC: a comprehensive, free-to-access, online database providing toxicological/feature data. The toxicity labels are retrieved from this database. [PMID: 36400569]
  Chemically structural similarityTop-200 similar NPs were calculated against the active-NP-set (includes approximately 50,000 NPs with experimentally-derived bioactivity available in NPASS)
Similarity is measured using the Tanimoto coefficient (Tc) , which compares the binary fingerprints of two molecules. Tc is calculated as the intersection divided by the union of '1' bits in the fingerprints, ranging from 0 to 1, with 1 indicating highest similarity.
●  The left chart: Distribution of similarity level between NPC178638 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.5 or Top200).
| Similarity Score | Similarity Level | Natural Product ID |
|---|---|---|
| NPC |
Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.
●  The left chart: Distribution of similarity level between NPC178638 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.5 or Top200).
| Similarity Score | Similarity Level | Drug ID | Developmental Stage |
|---|---|---|---|
| NPD |
  Bioactivity similaritySimilarity level is defined by Bioactivity similarity was calculated based on bioactivity descriptors of compounds. The bioactivity descriptors were calculated by a recently developed AI algorithm Chemical Checker (CC) [Nature Biotechnology, 38:1087–1096, 2020; Nature Communications, 12:3932, 2021], which evaluated bioactivity similarities at five levels:
☉ A: chemistry similarity;
☉ B: biological targets similarity;
☉ C: networks similarity;
☉ D: cell-based bioactivity similarity;
☉ E: similarity based on clinical data.
Those 5 categories of CC bioactivity descriptors were calculated and then subjected to manifold projection using UMAP algorithm, to project all NPs on a 2-Dimensional space. The current NP was highlighted with a small circle in the 2-D map. Below figures: left-to-right, A-to-E.
