Natural Product: NPC42965

Natural Product ID:  NPC42965
Common Name:   Calyxin J
IUPAC Name:  
Synonyms:   Calyxin J
Molecular Formula:   C42H38O9
Standard InCHIKey:  VIDHFKRYBXNWLN-OMQYIVAFSA-N
Standard InCHI:  InChI=1S/C42H38O9/c1-48-35-22-36-37(42-39(35)33(47)21-34(50-42)24-5-13-28(44)14-6-24)32-20-31(19-4-23-2-11-27(43)12-3-23)49-40(25-7-15-29(45)16-8-25)38(32)41(51-36)26-9-17-30(46)18-10-26/h2-3,5-18,22,31-32,34,38,40-41,43-46H,4,19-21H2,1H3/t31-,32-,34?,38-,40+,41-/m0/s1
Canonical SMILES:  COc1cc2O[C@@H](c3ccc(cc3)O)[C@H]3[C@H](c2c2c1C(=O)CC(O2)c1ccc(cc1)O)C[C@@H](O[C@@H]3c1ccc(cc1)O)CCc1ccc(cc1)O
First Find Year:  
Max Developmental Stage:  
Synthetic Gene Cluster:   ;

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO6836 Alpinia blepharocalyx Species Zingiberaceae Eukaryota TCMID*

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT2 Others Unspecified ED50 = 23.2 nM 11430002
NPT453 Cell Line HT-1080 Homo sapiens ED50 = 8.19 nM 11430002
NPT2 Others Unspecified ED50 = 13.7 nM 11430002
NPT453 Cell Line HT-1080 Homo sapiens ED50 = 0.32 nM 11430002

  Similar Natural Products in NPASS

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC42965 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
0.9868 High Similarity NPC226462
0.9868 High Similarity NPC1796
0.9868 High Similarity NPC98023
0.9803 High Similarity NPC51247
0.9737 High Similarity NPC257166
0.9673 High Similarity NPC15815
0.9669 High Similarity NPC121568
0.961 High Similarity NPC195136
0.9608 High Similarity NPC475184
0.9608 High Similarity NPC208258
0.9605 High Similarity NPC37253
0.9605 High Similarity NPC79375
0.9603 High Similarity NPC208011
0.9603 High Similarity NPC78324
0.9603 High Similarity NPC115601
0.9603 High Similarity NPC39154
0.9545 High Similarity NPC105584
0.9542 High Similarity NPC69531
0.9536 High Similarity NPC178484
0.949 High Similarity NPC473010
0.9487 High Similarity NPC473012
0.9484 High Similarity NPC121647
0.9481 High Similarity NPC322459
0.9481 High Similarity NPC324358
0.9481 High Similarity NPC323627
0.9481 High Similarity NPC318527
0.9481 High Similarity NPC287789
0.9481 High Similarity NPC271741
0.9477 High Similarity NPC300668
0.9477 High Similarity NPC134171
0.9427 High Similarity NPC473009
0.9423 High Similarity NPC301256
0.9423 High Similarity NPC312273
0.9419 High Similarity NPC51760
0.9416 High Similarity NPC198489
0.9416 High Similarity NPC61112
0.9416 High Similarity NPC32867
0.9404 High Similarity NPC3642
0.9404 High Similarity NPC132345
0.9351 High Similarity NPC258474
0.9351 High Similarity NPC201227
0.9351 High Similarity NPC182555
0.9351 High Similarity NPC66441
0.9346 High Similarity NPC174086
0.9346 High Similarity NPC43345
0.9338 High Similarity NPC122894
0.9308 High Similarity NPC251336
0.9295 High Similarity NPC295090
0.929 High Similarity NPC56049
0.929 High Similarity NPC309648
0.929 High Similarity NPC54830
0.9286 High Similarity NPC324447
0.9281 High Similarity NPC476552
0.9281 High Similarity NPC476553
0.9281 High Similarity NPC476551
0.9276 High Similarity NPC473016
0.9272 High Similarity NPC475348
0.9272 High Similarity NPC261271
0.9226 High Similarity NPC150908
0.9226 High Similarity NPC205026
0.9226 High Similarity NPC265624
0.9226 High Similarity NPC158027
0.9226 High Similarity NPC159707
0.9226 High Similarity NPC215203
0.9226 High Similarity NPC52611
0.9226 High Similarity NPC100049
0.9226 High Similarity NPC121649
0.9226 High Similarity NPC248739
0.9226 High Similarity NPC14606
0.9226 High Similarity NPC186227
0.9211 High Similarity NPC152233
0.9205 High Similarity NPC473078
0.9205 High Similarity NPC470133
0.9205 High Similarity NPC470131
0.9205 High Similarity NPC470132
0.9205 High Similarity NPC470134
0.9205 High Similarity NPC228779
0.9205 High Similarity NPC109183
0.9182 High Similarity NPC63438
0.9177 High Similarity NPC18380
0.9172 High Similarity NPC195167
0.9161 High Similarity NPC303485
0.9161 High Similarity NPC71061
0.9161 High Similarity NPC290830
0.9161 High Similarity NPC72425
0.9161 High Similarity NPC194593
0.9156 High Similarity NPC309512
0.9156 High Similarity NPC204561
0.9156 High Similarity NPC148945
0.9156 High Similarity NPC317715
0.9156 High Similarity NPC78835
0.9156 High Similarity NPC316960
0.9141 High Similarity NPC168789
0.9139 High Similarity NPC470135
0.9139 High Similarity NPC470136
0.9139 High Similarity NPC271288
0.9139 High Similarity NPC282957
0.9139 High Similarity NPC39045
0.9139 High Similarity NPC473014
0.9139 High Similarity NPC194949
0.9139 High Similarity NPC235217
0.9119 High Similarity NPC15374
0.9119 High Similarity NPC473011
0.9114 High Similarity NPC292863
0.9114 High Similarity NPC184326
0.9085 High Similarity NPC145467
0.908 High Similarity NPC477529
0.9079 High Similarity NPC127059
0.9079 High Similarity NPC285630
0.9073 High Similarity NPC185276
0.9073 High Similarity NPC223812
0.9073 High Similarity NPC81697
0.9073 High Similarity NPC125894
0.9073 High Similarity NPC85162
0.9073 High Similarity NPC77794
0.9073 High Similarity NPC278249
0.9073 High Similarity NPC107177
0.9068 High Similarity NPC224851
0.9057 High Similarity NPC137232
0.9057 High Similarity NPC114652
0.9057 High Similarity NPC175513
0.9051 High Similarity NPC55443
0.9051 High Similarity NPC18699
0.9051 High Similarity NPC123544
0.9051 High Similarity NPC90497
0.9032 High Similarity NPC209142
0.9032 High Similarity NPC325429
0.9032 High Similarity NPC67322
0.9032 High Similarity NPC138299
0.9032 High Similarity NPC222713
0.9032 High Similarity NPC312549
0.9032 High Similarity NPC111112
0.9026 High Similarity NPC291746
0.9026 High Similarity NPC288840
0.902 High Similarity NPC283234
0.902 High Similarity NPC473077
0.902 High Similarity NPC296998
0.902 High Similarity NPC10990
0.902 High Similarity NPC300988
0.902 High Similarity NPC308200
0.9013 High Similarity NPC473015
0.9013 High Similarity NPC471473
0.9013 High Similarity NPC131579
0.9013 High Similarity NPC473013
0.9013 High Similarity NPC471523
0.9013 High Similarity NPC236766
0.9013 High Similarity NPC197252
0.9013 High Similarity NPC131568
0.9013 High Similarity NPC471524
0.9007 High Similarity NPC227579
0.9007 High Similarity NPC324436
0.9007 High Similarity NPC194432
0.9007 High Similarity NPC223500
0.9007 High Similarity NPC76372
0.9007 High Similarity NPC66515
0.9007 High Similarity NPC167624
0.9007 High Similarity NPC182852
0.9007 High Similarity NPC228504
0.9007 High Similarity NPC265040
0.9007 High Similarity NPC328164
0.9007 High Similarity NPC306829
0.9007 High Similarity NPC177354
0.9007 High Similarity NPC40833
0.9007 High Similarity NPC166934
0.9007 High Similarity NPC125855
0.9007 High Similarity NPC296917
0.9007 High Similarity NPC324134
0.9007 High Similarity NPC148757
0.9007 High Similarity NPC161506
0.9007 High Similarity NPC37496
0.9007 High Similarity NPC78
0.9007 High Similarity NPC166482
0.9007 High Similarity NPC1089
0.9007 High Similarity NPC107572
0.9007 High Similarity NPC10937
0.9007 High Similarity NPC220998
0.9007 High Similarity NPC76338
0.9007 High Similarity NPC64915
0.9007 High Similarity NPC32739
0.8974 High Similarity NPC166067
0.8968 High Similarity NPC29777
0.8968 High Similarity NPC471115
0.8961 High Similarity NPC160821
0.8961 High Similarity NPC132592
0.8961 High Similarity NPC161191
0.8961 High Similarity NPC39195
0.8954 High Similarity NPC111786
0.8954 High Similarity NPC214774
0.8954 High Similarity NPC301276
0.8954 High Similarity NPC475052
0.8954 High Similarity NPC312973
0.8954 High Similarity NPC54577
0.8954 High Similarity NPC176229
0.8954 High Similarity NPC476088
0.8954 High Similarity NPC88964
0.8954 High Similarity NPC477955
0.8954 High Similarity NPC470647
0.8954 High Similarity NPC472629
0.8954 High Similarity NPC246948
0.8954 High Similarity NPC195621

  Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC42965 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.9477 High Similarity NPD8443 Clinical (unspecified phase)
0.9057 High Similarity NPD6959 Discontinued
0.9006 High Similarity NPD7852 Clinical (unspecified phase)
0.8805 High Similarity NPD7768 Phase 2
0.879 High Similarity NPD7411 Suspended
0.8766 High Similarity NPD7410 Clinical (unspecified phase)
0.8679 High Similarity NPD7819 Suspended
0.8675 High Similarity NPD1550 Clinical (unspecified phase)
0.8675 High Similarity NPD1552 Clinical (unspecified phase)
0.8645 High Similarity NPD4378 Clinical (unspecified phase)
0.8634 High Similarity NPD7075 Discontinued
0.8618 High Similarity NPD1549 Phase 2
0.8614 High Similarity NPD7804 Clinical (unspecified phase)
0.8608 High Similarity NPD4380 Phase 2
0.8562 High Similarity NPD2393 Clinical (unspecified phase)
0.8545 High Similarity NPD6166 Phase 2
0.8545 High Similarity NPD6168 Clinical (unspecified phase)
0.8545 High Similarity NPD6167 Clinical (unspecified phase)
0.8447 Intermediate Similarity NPD7096 Clinical (unspecified phase)
0.8366 Intermediate Similarity NPD2796 Approved
0.8343 Intermediate Similarity NPD7074 Phase 3
0.8301 Intermediate Similarity NPD1510 Phase 2
0.8293 Intermediate Similarity NPD4381 Clinical (unspecified phase)
0.8272 Intermediate Similarity NPD1934 Approved
0.8193 Intermediate Similarity NPD5494 Approved
0.8182 Intermediate Similarity NPD3749 Approved
0.8176 Intermediate Similarity NPD7054 Approved
0.816 Intermediate Similarity NPD6801 Discontinued
0.8158 Intermediate Similarity NPD1240 Approved
0.815 Intermediate Similarity NPD8312 Approved
0.815 Intermediate Similarity NPD8313 Approved
0.8146 Intermediate Similarity NPD4907 Clinical (unspecified phase)
0.8129 Intermediate Similarity NPD7472 Approved
0.8113 Intermediate Similarity NPD7390 Discontinued
0.8092 Intermediate Similarity NPD7808 Phase 3
0.8089 Intermediate Similarity NPD7421 Clinical (unspecified phase)
0.8081 Intermediate Similarity NPD7993 Clinical (unspecified phase)
0.8059 Intermediate Similarity NPD7473 Discontinued
0.8052 Intermediate Similarity NPD1607 Approved
0.8035 Intermediate Similarity NPD7251 Discontinued
0.8013 Intermediate Similarity NPD4908 Phase 1
0.8012 Intermediate Similarity NPD4868 Clinical (unspecified phase)
0.7977 Intermediate Similarity NPD6797 Phase 2
0.7935 Intermediate Similarity NPD6651 Approved
0.7925 Intermediate Similarity NPD3750 Approved
0.7892 Intermediate Similarity NPD2801 Approved
0.7892 Intermediate Similarity NPD8455 Phase 2
0.7888 Intermediate Similarity NPD6799 Approved
0.7888 Intermediate Similarity NPD1511 Approved
0.7882 Intermediate Similarity NPD6232 Discontinued
0.7862 Intermediate Similarity NPD2800 Approved
0.7861 Intermediate Similarity NPD5844 Phase 1
0.7829 Intermediate Similarity NPD6559 Discontinued
0.7818 Intermediate Similarity NPD6599 Discontinued
0.7799 Intermediate Similarity NPD970 Clinical (unspecified phase)
0.7798 Intermediate Similarity NPD3882 Suspended
0.7792 Intermediate Similarity NPD6859 Clinical (unspecified phase)
0.7791 Intermediate Similarity NPD1512 Approved
0.7784 Intermediate Similarity NPD4419 Clinical (unspecified phase)
0.7758 Intermediate Similarity NPD7458 Discontinued
0.7744 Intermediate Similarity NPD5403 Approved
0.7738 Intermediate Similarity NPD3817 Phase 2
0.7735 Intermediate Similarity NPD7879 Clinical (unspecified phase)
0.7722 Intermediate Similarity NPD8397 Clinical (unspecified phase)
0.7722 Intermediate Similarity NPD2799 Discontinued
0.7701 Intermediate Similarity NPD3818 Discontinued
0.7673 Intermediate Similarity NPD1551 Phase 2
0.7673 Intermediate Similarity NPD6100 Approved
0.7673 Intermediate Similarity NPD6099 Approved
0.767 Intermediate Similarity NPD5953 Discontinued
0.7663 Intermediate Similarity NPD8090 Clinical (unspecified phase)
0.765 Intermediate Similarity NPD4363 Phase 3
0.765 Intermediate Similarity NPD4360 Phase 2
0.7625 Intermediate Similarity NPD2344 Approved
0.7622 Intermediate Similarity NPD2533 Approved
0.7622 Intermediate Similarity NPD5401 Approved
0.7622 Intermediate Similarity NPD2534 Approved
0.7622 Intermediate Similarity NPD2532 Approved
0.7622 Intermediate Similarity NPD7004 Clinical (unspecified phase)
0.761 Intermediate Similarity NPD3748 Approved
0.7593 Intermediate Similarity NPD7003 Approved
0.7592 Intermediate Similarity NPD8151 Discontinued
0.7584 Intermediate Similarity NPD4338 Clinical (unspecified phase)
0.7562 Intermediate Similarity NPD2935 Discontinued
0.7557 Intermediate Similarity NPD7286 Phase 2
0.755 Intermediate Similarity NPD1610 Phase 2
0.7545 Intermediate Similarity NPD3226 Approved
0.7545 Intermediate Similarity NPD5808 Clinical (unspecified phase)
0.7531 Intermediate Similarity NPD1243 Approved
0.753 Intermediate Similarity NPD920 Approved
0.7529 Intermediate Similarity NPD5402 Approved
0.75 Intermediate Similarity NPD1509 Clinical (unspecified phase)
0.75 Intermediate Similarity NPD643 Clinical (unspecified phase)
0.7485 Intermediate Similarity NPD6398 Clinical (unspecified phase)
0.7485 Intermediate Similarity NPD4628 Phase 3
0.7474 Intermediate Similarity NPD7871 Phase 2
0.7474 Intermediate Similarity NPD7870 Phase 2
0.7456 Intermediate Similarity NPD7615 Clinical (unspecified phase)
0.7439 Intermediate Similarity NPD2309 Approved
0.7436 Intermediate Similarity NPD6832 Phase 2
0.7434 Intermediate Similarity NPD1547 Clinical (unspecified phase)
0.7423 Intermediate Similarity NPD7783 Phase 2
0.7423 Intermediate Similarity NPD7782 Clinical (unspecified phase)
0.7421 Intermediate Similarity NPD7698 Approved
0.7421 Intermediate Similarity NPD7697 Approved
0.7421 Intermediate Similarity NPD5124 Phase 1
0.7421 Intermediate Similarity NPD5123 Clinical (unspecified phase)
0.7421 Intermediate Similarity NPD7696 Phase 3
0.741 Intermediate Similarity NPD642 Clinical (unspecified phase)
0.7378 Intermediate Similarity NPD1878 Clinical (unspecified phase)
0.7371 Intermediate Similarity NPD7229 Phase 3
0.7368 Intermediate Similarity NPD1465 Phase 2
0.7346 Intermediate Similarity NPD5404 Approved
0.7346 Intermediate Similarity NPD5405 Approved
0.7346 Intermediate Similarity NPD5406 Approved
0.7346 Intermediate Similarity NPD5408 Approved
0.7342 Intermediate Similarity NPD2313 Discontinued
0.7342 Intermediate Similarity NPD3268 Approved
0.733 Intermediate Similarity NPD3926 Phase 2
0.7326 Intermediate Similarity NPD4361 Phase 2
0.7326 Intermediate Similarity NPD4362 Clinical (unspecified phase)
0.7322 Intermediate Similarity NPD8150 Discontinued
0.7308 Intermediate Similarity NPD2798 Approved
0.7301 Intermediate Similarity NPD2346 Discontinued
0.7284 Intermediate Similarity NPD7033 Discontinued
0.7273 Intermediate Similarity NPD3787 Discontinued
0.7268 Intermediate Similarity NPD7701 Phase 2
0.7263 Intermediate Similarity NPD6777 Approved
0.7263 Intermediate Similarity NPD6781 Approved
0.7263 Intermediate Similarity NPD6779 Approved
0.7263 Intermediate Similarity NPD7501 Clinical (unspecified phase)
0.7263 Intermediate Similarity NPD6776 Approved
0.7263 Intermediate Similarity NPD6778 Approved
0.7263 Intermediate Similarity NPD6780 Approved
0.7263 Intermediate Similarity NPD6782 Approved
0.7244 Intermediate Similarity NPD2797 Approved
0.7244 Intermediate Similarity NPD1203 Approved
0.7243 Intermediate Similarity NPD4287 Approved
0.724 Intermediate Similarity NPD7435 Discontinued
0.7219 Intermediate Similarity NPD6980 Clinical (unspecified phase)
0.7216 Intermediate Similarity NPD7584 Approved
0.7216 Intermediate Similarity NPD7199 Phase 2
0.7209 Intermediate Similarity NPD7577 Discontinued
0.7207 Intermediate Similarity NPD7228 Approved
0.7207 Intermediate Similarity NPD7177 Discontinued
0.7207 Intermediate Similarity NPD7893 Clinical (unspecified phase)
0.7207 Intermediate Similarity NPD3751 Discontinued
0.7202 Intermediate Similarity NPD7447 Phase 1
0.7202 Intermediate Similarity NPD8320 Phase 1
0.7202 Intermediate Similarity NPD7422 Clinical (unspecified phase)
0.7202 Intermediate Similarity NPD8319 Approved
0.72 Intermediate Similarity NPD919 Approved
0.7175 Intermediate Similarity NPD5711 Approved
0.7175 Intermediate Similarity NPD5710 Approved
0.7174 Intermediate Similarity NPD8055 Clinical (unspecified phase)
0.7171 Intermediate Similarity NPD1548 Phase 1
0.717 Intermediate Similarity NPD4625 Phase 3
0.716 Intermediate Similarity NPD6273 Approved
0.7158 Intermediate Similarity NPD7699 Phase 2
0.7158 Intermediate Similarity NPD7700 Phase 2
0.7157 Intermediate Similarity NPD7801 Approved
0.7143 Intermediate Similarity NPD943 Approved
0.7143 Intermediate Similarity NPD7212 Phase 2
0.7143 Intermediate Similarity NPD7213 Phase 3
0.7135 Intermediate Similarity NPD8434 Phase 2
0.7135 Intermediate Similarity NPD7184 Clinical (unspecified phase)
0.7125 Intermediate Similarity NPD6410 Clinical (unspecified phase)
0.7125 Intermediate Similarity NPD6798 Discontinued
0.7119 Intermediate Similarity NPD1247 Approved
0.7117 Intermediate Similarity NPD7097 Phase 1
0.7107 Intermediate Similarity NPD7874 Approved
0.7107 Intermediate Similarity NPD7875 Clinical (unspecified phase)
0.7099 Intermediate Similarity NPD6355 Discontinued
0.7098 Intermediate Similarity NPD6823 Phase 2
0.7095 Intermediate Similarity NPD7784 Clinical (unspecified phase)
0.7091 Intermediate Similarity NPD2343 Clinical (unspecified phase)
0.7069 Intermediate Similarity NPD5760 Phase 2
0.7069 Intermediate Similarity NPD5761 Phase 2
0.7051 Intermediate Similarity NPD9717 Approved
0.7051 Intermediate Similarity NPD1608 Approved
0.7044 Intermediate Similarity NPD2861 Phase 2
0.7037 Intermediate Similarity NPD1613 Approved
0.7037 Intermediate Similarity NPD1612 Clinical (unspecified phase)
0.7033 Intermediate Similarity NPD1729 Discontinued
0.7029 Intermediate Similarity NPD4288 Approved
0.7025 Intermediate Similarity NPD3267 Approved
0.7025 Intermediate Similarity NPD3266 Approved
0.7019 Intermediate Similarity NPD3764 Approved
0.7011 Intermediate Similarity NPD6844 Discontinued
0.7011 Intermediate Similarity NPD37 Approved
0.7006 Intermediate Similarity NPD6234 Discontinued
0.7006 Intermediate Similarity NPD4749 Approved
0.7006 Intermediate Similarity NPD2654 Approved
0.7 Intermediate Similarity NPD6534 Approved
0.7 Intermediate Similarity NPD6535 Approved
0.6989 Remote Similarity NPD4965 Approved
0.6989 Remote Similarity NPD4967 Phase 2
0.6989 Remote Similarity NPD4966 Approved
0.6987 Remote Similarity NPD422 Phase 1
0.6987 Remote Similarity NPD1201 Approved

Structure

External Identifiers

PubChem CID   11765183
ChEMBL   CHEMBL510115
ZINC  

Physicochemical Properties

Molecular Weight:  686.25
ALogP:  -3.0963
MLogP:  5.09
XLogP:  6.81
# Rotatable Bonds:  12
Polar Surface Area:  134.91
# H-Bond Aceptor:  2
# H-Bond Donor:  4
# Rings:  8
# Heavy Atoms:  51

Download Data

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General Info & Identifiers & Properties  
Structure MOL file  
Source Organisms  
Biological Activities  
Similar NPs/Drugs