CMAUP Plant Collective Molecular Activities

Collective Molecular Activities of the Plant: Rhamnus

Example Image

PLANiTS DNA barcode

Click for details-----ITS

GGATCATTGTCGAAACCCTGCACAGCAGAACGACCCGTGAACTAGTAAAACAAACTCGGGGGCGAGGGGCCCCATAGCCCCAGACCTCCTTGGCTTGGCGGGCGCCATCACCGGGCGTCGCTGGTCGACGCACGTTGGTGTTGCCTTCTAAGCCGTACAAACGAACCCCGGCGCAAAACGCGCCAAGGAACTTCAACGAATCAGCATGCCCCGGCACCCCAGAAACGGTGCGTGTCTGGGGCGTTGCGTTGTATTCTTTATATGTCAAAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTCTTTGAACGCAAGTTGCGCCCAAAGCCATTAGGCCGAGGGCACGTCTGCCTGGGCGTCACACAACGTTGCCCCCCCCCCAAAACCTCGACTTCGAGGAGGACGGGGGGCGGATGCTGGCCTCCTGTGTGCCACGGCTCGCGGTTGGCCTAAATACGAGTACTCGGCGACGAGCGCCGCGGCAATCGGTGGTTGTCCAACCCTCGGTGCCATGCTGCGCGCGTGAGACGCTCACTGTTACTCGAGGACCCCAATGCGTCGTAGCCACGATGCTCACAACGCGACCCCAGGTCAGGCGGGGC

Click for details-----ITS1

GTAGGTGAACCTGCGGAAGGATCATTGTCGATACCCTGCACAGCAGAACGACCCGTGAACTAGTAAATCCAACTCGGGGGCKAGGGGCCCTAGAGCCCCGAACCTCCTTGGCWTGGGGGGCGTCATYGYCGAGCGGCGCTGGTCGACWCTCGTYGGTGCCMCCCTCCAAGCCGCACAAACGAACCCCGGCGCAAAACGCGCCAAGGAACTTCAAMGAATCAGCATGCCCCGGCGCCCCAGAAATGGTGCGTGTCCGGGGCGTTGCGTCGTATTCTTTATGTCAAAA

Click for details-----ITS2

AACGTTGCCCCCCCAAAACCTCGTCTTCGAGGAGGACGGGGGGCGGATGCTGGCCTCCTGTGCGCCACGGCTCGCGGTTGGCCAAAATGCGAGTACTCGGCGACGAGCGCCGCGGCAATCGGTGGTTGTCCAACCCTCGGTGCCATGCTGTGCGCGTGAGACGCTCATTGTTACTCGACAACCCCAATGCGTCGTAGCCACGATGCTCACAACGCGACCCCAGGTCAGGCGGGGC

Taxonomic Information

Plant ID: NPO33118
Plant Latin Name: Rhamnus
Taxonomy Genus: Rhamnus
Taxonomy Family: Rhamnaceae

Plant External Links:

NCBI TaxonomyDB: n.a.
Plant-of-the-World-Online: n.a.

Geographical Distribution

See the Plant Occurrence Worldwide with Latitude and Longitude Available

Compounds Summary

Overview of Ingredients

18 All known Ingredients in Total

Unique ingredients have been isolated from this plant.
Plant-Ingredients Associations were manually curated from publications or collected from other databases.

7 Ingredients with Acceptable Bioavailablity

Unique ingredients exhibit acceptable human oral bioavailablity, according to the criteria of SwissADME [PMID: 28256516] and HobPre [PMID: 34991690]. The criteria details:

SwissADME: six descriptors are used by SwissADME to evaluate the oral bioavailability of a natural product:
  ☑ LIPO(Lipophility): -0.7 < XLOGP3 < +5.0
  ☑ SIZE: 150g/mol < MW < 500g/mol
  ☑ POLAR(Polarity): 20Å² < TPSA < 130Å²
  ☑ INSOLU(Insolubility): -6 < Log S (ESOL) < 0
  ☑ INSATU(Insaturation): 0.25 < Fraction Csp3 < 1
  ☑ FLEX(Flexibility): 0 < Num. rotatable bonds < 9

If 6 descriptors of a natural plant satisfy the above rules, it will be labeled high HOB.
HobPre: A natural plant ingredient with HobPre score >0.5 is labeled high human oral availability (HOB)