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Collective Molecular Activities of the Plant: Berberis Vulgaris


Example Image
PLANiTS DNA barcode

Click for details-----ITS

NA

Click for details-----ITS1

NA

Click for details-----ITS2

NA
Taxonomic Information

Plant ID: NPO17909
Plant Latin Name: Berberis Vulgaris
Taxonomy Genus: Berberis
Taxonomy Family: Berberidaceae

Plant External Links:

NCBI TaxonomyDB: 258209
Plant-of-the-World-Online: n.a.

Geographical Distribution
See the Plant Occurrence Worldwide with Latitude and Longitude Available

Compounds Summary

Overview of Ingredients

19 All known Ingredients in Total

Unique ingredients have been isolated from this plant.
Plant-Ingredients Associations were manually curated from publications or collected from other databases.


9 Ingredients with Acceptable Bioavailablity

Unique ingredients exhibit acceptable human oral bioavailablity, according to the criteria of SwissADME [PMID: 28256516] and HobPre [PMID: 34991690]. The criteria details:

SwissADME: six descriptors are used by SwissADME to evaluate the oral bioavailability of a natural product:
  ☑ LIPO(Lipophility): -0.7 < XLOGP3 < +5.0
  ☑ SIZE: 150g/mol < MW < 500g/mol
  ☑ POLAR(Polarity): 20Ų < TPSA < 130Ų
  ☑ INSOLU(Insolubility): -6 < Log S (ESOL) < 0
  ☑ INSATU(Insaturation): 0.25 < Fraction Csp3 < 1
  ☑ FLEX(Flexibility): 0 < Num. rotatable bonds < 9

If 6 descriptors of a natural plant satisfy the above rules, it will be labeled high HOB.
HobPre: A natural plant ingredient with HobPre score >0.5 is labeled high human oral availability (HOB)

14 Ingredients with experimental-derived Activity

Unique ingredients have activity data available.






Ingredient Structrual Cards


Ingredient ID: NPC78359

Ingredient ID: NPC7715

Ingredient ID: NPC53069

Ingredient ID: NPC49075

Ingredient ID: NPC480592

Ingredient ID: NPC480591

Ingredient ID: NPC480590

Ingredient ID: NPC480589

Ingredient ID: NPC47298

Ingredient ID: NPC4669

Ingredient ID: NPC300481

Ingredient ID: NPC251735

Ingredient ID: NPC248109

Ingredient ID: NPC200388

Ingredient ID: NPC199402

Ingredient ID: NPC181796

Ingredient ID: NPC16452

Ingredient ID: NPC117785

Ingredient ID: NPC116007