CMAUP Plant Collective Molecular Activities

Collective Molecular Activities of the Plant: Rubia Tinctorum

Example Image

PLANiTS DNA barcode

Click for details-----ITS

CATTGTCGAATCCTGCAGACGACCGCGCACACGTTCTTAAAAACTGCGCGGGGAGCCGGTGGGGCGGGTGCTGCAGCTCGCGCCCCCTGGCGAACCGCGCCAAACCTTAACTCTCGGCGCGAAAAGCGCCAAGGACTACTCGAACGGATCTGGCGGCGTCCCCCGCGGCTTCCGCGGTGGGATGTCCTGGAGTCTGAAACGTAACCAACACGACTCTCGGCAACGGATATCTAGGCTCTCGCATCGATGAAGAACGTAGCAAAATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAATCATCGAGTTTTTGAACGCAAGTTGCGCCCGAAGCCATCCGGCCAAGGGCACGTCTGCCTGGGCGTCACGCATCTCGTCGCCATCCCTCCTCGTCCTCTCGGGCGTCGACGGGCTGGCGGATGCTGGCCTCCCGTTCCCTCGCGGCCCGGGTGGCCCAAAAGGTAGGCTCCCCGGAAATGGGGCGTCACGACTAAAGGTGGTTGGAACTCGTTCCATTCTCGCTCTCAGCCGTGACGGCCCCCGGTGTGCCGCGAATGACCCTGGCCGCCCCCGGTCCATCCCTCGGTGGACTGCGGGCCCTTCGACCGCGACCCCAGTCAGGC

Click for details-----ITS1

Click for details-----ITS2

ATCTCGTCGCCATCCCTCCTCGTCCTCTCGGGCGTCGACGGGCTGGCGGATGCTGGCCTCCCGTTCCCTCGCGGCCCGGGTGGCCCAAAAGGTAGGCTCCCCGGAAATGGGGCGTCACGACTAAAGGTGGTTGGAACTCGTTCCATTCTCGCTCTCAGCCGTGACGGCCCCCGGTGTGCCGCGAATGACCCTGGCCGCCCCCGGTCCATCCCTCGGTGGACTGCGGGCCCTTCGACCGCGACCCCAGTCAGGC

Taxonomic Information

Plant ID: NPO10014
Plant Latin Name: Rubia Tinctorum
Taxonomy Genus: Rubia
Taxonomy Family: Rubiaceae

Plant External Links:

NCBI TaxonomyDB: 29802
Plant-of-the-World-Online: 765369-1

Used in Medicines

Country/Region:

Turkey; Italy; India; Lebanon; Jordan; China

Traditional Medicine System:

Indian Folk; TCM

Medicinal Functions:

Aperient; Astringent; Cholagogue; Diuretic; Emmenagogue

Geographical Distribution

Turkey; Afghanistan; Italy; Turkmenistan; Lebanon; France; Argentina; Uzbekistan; Iran; Algeria; Jordan; Chile; China; Germany; Kazakhstan; Spain; Ukraine; Netherlands; Libya; Iraq; Morocco; Vietnam; Switzerland; Russia; Bulgaria; Pakistan; Albania; Portugal; Tunisia; Tajikistan; India; United Kingdom; Austria; Greece; Hungary; Cyprus

Geographical Distribution

See the Plant Occurrence Worldwide with Latitude and Longitude Available

Compounds Summary

Overview of Ingredients

14 All known Ingredients in Total

Unique ingredients have been isolated from this plant.
Plant-Ingredients Associations were manually curated from publications or collected from other databases.

11 Ingredients with Acceptable Bioavailablity

Unique ingredients exhibit acceptable human oral bioavailablity, according to the criteria of SwissADME [PMID: 28256516] and HobPre [PMID: 34991690]. The criteria details:

SwissADME: six descriptors are used by SwissADME to evaluate the oral bioavailability of a natural product:
  ☑ LIPO(Lipophility): -0.7 < XLOGP3 < +5.0
  ☑ SIZE: 150g/mol < MW < 500g/mol
  ☑ POLAR(Polarity): 20Å² < TPSA < 130Å²
  ☑ INSOLU(Insolubility): -6 < Log S (ESOL) < 0
  ☑ INSATU(Insaturation): 0.25 < Fraction Csp3 < 1
  ☑ FLEX(Flexibility): 0 < Num. rotatable bonds < 9

If 6 descriptors of a natural plant satisfy the above rules, it will be labeled high HOB.
HobPre: A natural plant ingredient with HobPre score >0.5 is labeled high human oral availability (HOB)