Structure

Physi-Chem Properties

Molecular Weight:  588.4
Volume:  618.836
LogP:  5.655
LogD:  4.729
LogS:  -4.23
# Rotatable Bonds:  3
TPSA:  116.45
# H-Bond Aceptor:  7
# H-Bond Donor:  4
# Rings:  6
# Heavy Atoms:  7

MedChem Properties

QED Drug-Likeness Score:  0.247
Synthetic Accessibility Score:  5.132
Fsp3:  0.914
Lipinski Rule-of-5:  Rejected
Pfizer Rule:  Accepted
GSK Rule:  Rejected
BMS Rule:  0
Golden Triangle Rule:  Rejected
Chelating Alert:  0
PAINS Alert:  0

ADMET Properties (ADMETlab2.0)

ADMET: Absorption

Caco-2 Permeability:  -5.365
MDCK Permeability:  1.829775283113122e-05
Pgp-inhibitor:  0.101
Pgp-substrate:  0.001
Human Intestinal Absorption (HIA):  0.009
20% Bioavailability (F20%):  0.021
30% Bioavailability (F30%):  0.297

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB):  0.105
Plasma Protein Binding (PPB):  93.09131622314453%
Volume Distribution (VD):  0.629
Pgp-substrate:  5.7545857429504395%

ADMET: Metabolism

CYP1A2-inhibitor:  0.002
CYP1A2-substrate:  0.628
CYP2C19-inhibitor:  0.007
CYP2C19-substrate:  0.764
CYP2C9-inhibitor:  0.083
CYP2C9-substrate:  0.12
CYP2D6-inhibitor:  0.01
CYP2D6-substrate:  0.121
CYP3A4-inhibitor:  0.148
CYP3A4-substrate:  0.124

ADMET: Excretion

Clearance (CL):  0.917
Half-life (T1/2):  0.099

ADMET: Toxicity

hERG Blockers:  0.009
Human Hepatotoxicity (H-HT):  0.305
Drug-inuced Liver Injury (DILI):  0.012
AMES Toxicity:  0.027
Rat Oral Acute Toxicity:  0.119
Maximum Recommended Daily Dose:  0.903
Skin Sensitization:  0.069
Carcinogencity:  0.098
Eye Corrosion:  0.012
Eye Irritation:  0.019
Respiratory Toxicity:  0.98

Download Data

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General Info & Identifiers & Properties  
Structure MOL file  
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Similar NPs/Drugs  

  Natural Product: NPC283849

Natural Product ID:  NPC283849
Common Name*:   Fatsiaside A1
IUPAC Name:   (4aS,6aR,6aS,6bR,8aR,10S,12aR,14bS)-2,2,6a,6b,9,9,12a-heptamethyl-10-[(2S,3R,4S,5S)-3,4,5-trihydroxyoxan-2-yl]oxy-1,3,4,5,6,6a,7,8,8a,10,11,12,13,14b-tetradecahydropicene-4a-carboxylic acid
Synonyms:  
Standard InCHIKey:  HZLWUYJLOIAQFC-HRDZKRTASA-N
Standard InCHI:  InChI=1S/C35H56O7/c1-30(2)14-16-35(29(39)40)17-15-33(6)20(21(35)18-30)8-9-24-32(5)12-11-25(31(3,4)23(32)10-13-34(24,33)7)42-28-27(38)26(37)22(36)19-41-28/h8,21-28,36-38H,9-19H2,1-7H3,(H,39,40)/t21-,22-,23-,24+,25-,26-,27+,28-,32-,33+,34+,35-/m0/s1
SMILES:  CC1(C)CC[C@@]2(CC[C@]3(C)C(=CC[C@@H]4[C@@]5(C)CC[C@@H](C(C)(C)[C@@H]5CC[C@@]34C)O[C@H]3[C@@H]([C@H]([C@H](CO3)O)O)O)[C@@H]2C1)C(=O)O
Synthetic Gene Cluster:   n.a.
ChEMBL Identifier:   CHEMBL444982
PubChem CID:   13878127
Chemical Classification**:  
  • CHEMONTID:0000000 [Organic compounds]
    • [CHEMONTID:0000012] Lipids and lipid-like molecules
      • [CHEMONTID:0000259] Prenol lipids
        • [CHEMONTID:0001553] Triterpenoids

*Note: the InCHIKey will be temporarily assigned as the "Common Name" if no IUPAC name or alternative short name is available.
**Note: the Chemical Classification was calculated by NPClassifier Version 1.5. Reference: PMID:34662515.

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO25976 Dendronephthya gigantea Species Nephtheidae Eukaryota n.a. n.a. n.a. PMID[10843584]
NPO31494 Acanthopanax senticosus n.a. n.a. n.a. n.a. leaf n.a. PMID[11816040]
NPO27252 Iochroma australe Species Solanaceae Eukaryota n.a. n.a. n.a. PMID[12027740]
NPO26782 Dendrilla membranosa Species Darwinellidae Eukaryota n.a. antarctic n.a. PMID[15270575]
NPO25976 Dendronephthya gigantea Species Nephtheidae Eukaryota n.a. n.a. n.a. PMID[15497934]
NPO16143.1 Phyllanthus polyphyllus Under-species n.a. n.a. leaves n.a. n.a. PMID[16038539]
NPO31494 Acanthopanax senticosus n.a. n.a. n.a. n.a. n.a. n.a. PMID[17125224]
NPO25841 Caulophyllum thalictroides Species Berberidaceae Eukaryota underground parts n.a. n.a. PMID[19449879]
NPO32682 anemone taipaiensis Species Ranunculaceae Eukaryota rhizomes n.a. n.a. PMID[23992864]
NPO25976 Dendronephthya gigantea Species Nephtheidae Eukaryota n.a. n.a. n.a. PMID[30407007]
NPO31494 Acanthopanax senticosus n.a. n.a. n.a. Barks Iksan, Chunbuk, Korea n.a. PMID[3127544]
NPO8622 Stauntonia hexaphylla Species Lardizabalaceae Eukaryota Fruits n.a. n.a. PMID[31301930]
NPO8622 Stauntonia hexaphylla Species Lardizabalaceae Eukaryota n.a. n.a. n.a. Database[Article]
NPO30520 Patrinia scabiosaefolia Species Caprifoliaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO31494 Acanthopanax senticosus n.a. n.a. n.a. n.a. n.a. n.a. Database[HerDing]
NPO8622 Stauntonia hexaphylla Species Lardizabalaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO25821 Delphinium cashmerianum Species Ranunculaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO25717 Maytenus hookeri Species Celastraceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO26163 Anisodus tanguticus Species Solanaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO29051 Ranunculus acris Species Ranunculaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO25717 Maytenus hookeri Species Celastraceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO26163 Anisodus tanguticus Species Solanaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO25821 Delphinium cashmerianum Species Ranunculaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO8622 Stauntonia hexaphylla Species Lardizabalaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO2039 Callerya cinerea Species Fabaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO30520 Patrinia scabiosaefolia Species Caprifoliaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO31494 Acanthopanax senticosus n.a. n.a. n.a. n.a. n.a. n.a. Database[TCM_Taiwan]
NPO25717 Maytenus hookeri Species Celastraceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO26186 Stereocaulon leprocauloides Species Stereocaulaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26563 Alectoria japonica Species Parmeliaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25741 Aster ageratoides Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26026 Vitis silvestris Species Vitaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26289 Lecidella chodati Species Lecanoraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO8622 Stauntonia hexaphylla Species Lardizabalaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO13781 Eremostachys moluccelloides Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26952 Cineraria geifolia Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26430 Aplysina laevis Species Aplysinidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25976 Dendronephthya gigantea Species Nephtheidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25717 Maytenus hookeri Species Celastraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25821 Delphinium cashmerianum Species Ranunculaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO27252 Iochroma australe Species Solanaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO7214 Bufotes viridis Species Bufonidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26754 Stevia connata Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26244 Panax papyrifer Species Araliaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26163 Anisodus tanguticus Species Solanaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO2344 Carlina acanthifolia Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26782 Dendrilla membranosa Species Darwinellidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO137 Nepeta multifida Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26213 Tephrosia vogelii Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO2039 Callerya cinerea Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25997 Senecio rupestris Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO14466 Penicillium olsonii Species Aspergillaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26903 Plectranthus purpuratus Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19823 Vicia benghalensis Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26078 Mussaenda parviflora Species Rubiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25952 Lastrea thelypteris n.a. n.a. n.a. n.a. n.a. n.a. Database[UNPD]
NPO25926 Tephrosia pumila Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26135 Walsura tubulata Species Meliaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25873 Thaminophyllum multiflorum Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26980 Halocarpus biformis Species Podocarpaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26727 Eremocarpus setiger n.a. n.a. n.a. n.a. n.a. n.a. Database[UNPD]
NPO26625 Stichopus chloronotus Species Stichopodidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26109 Pilocarpus spicatus Species Rutaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26408 Melanophryniscus moreirae Species Bufonidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26352 Heuchera cylindrica Species Saxifragaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO24378 Osmanthus heterophyllus Species Oleaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO3346 Piper sanctum Species Piperaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26535 Balanus glandula Species Balanidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26678 Calea pilosa Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26053 Pluchea suaveolens Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25849 Streptomyces lomondensis Species Streptomycetaceae Bacteria n.a. n.a. n.a. Database[UNPD]
NPO18292 Guarea trichilioides Species Meliaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO11845 Petrorhagia dubia Species Caryophyllaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO27377 Diaporthe helianthi Species Diaporthaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25793 Gremmeniella abietina Species Helotiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO29051 Ranunculus acris Species Ranunculaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26884 Helichrysum davenportii Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26377 Amelanchier vulgaris Species Rosaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25841 Caulophyllum thalictroides Species Berberidaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26453 Prunus lusitanica Species Rosaceae Eukaryota n.a. n.a. n.a. Database[UNPD]

☑ Note for Reference:
In addition to directly collecting NP source organism data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated them from below databases:
UNPD: Universal Natural Products Database [PMID: 23638153].
StreptomeDB: a database of streptomycetes natural products [PMID: 33051671].
TM-MC: a database of medicinal materials and chemical compounds in Northeast Asian traditional medicine [PMID: 26156871].
TCM@Taiwan: a Traditional Chinese Medicine database [PMID: 21253603].
TCMID: a Traditional Chinese Medicine database [PMID: 29106634].
TCMSP: The traditional Chinese medicine systems pharmacology database and analysis platform [PMID: 24735618].
HerDing: a herb recommendation system to treat diseases using genes and chemicals [PMID: 26980517].
MetaboLights: a metabolomics database [PMID: 27010336].
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  NP Quantity Composition/Concentration

Organism ID NP ID Organism Material Preparation Organism Part NP Quantity (Standard) NP Quantity (Minimum) NP Quantity (Maximum) Quantity Unit Reference

☑ Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP quantitative records for specific NP domains (e.g., NPS from foods or herbs) from domain-specific databases. These databases include:
DUKE: Dr. Duke's Phytochemical and Ethnobotanical Databases.
PHENOL EXPLORER: is the first comprehensive database on polyphenol content in foods [PMID: 24103452], its homepage can be accessed at here.
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT639 Cell Line NCI-H187 Homo sapiens IC50 = 3.2 ug.mL-1 PMID[539061]
NPT189 Cell Line Vero Chlorocebus aethiops IC50 = 2.8 ug.mL-1 PMID[539061]
NPT116 Cell Line HL-60 Homo sapiens IC50 = 3.4 ug.mL-1 PMID[539062]
NPT165 Cell Line HeLa Homo sapiens IC50 = 19590.0 nM PMID[539063]
NPT81 Cell Line A549 Homo sapiens IC50 = 22340.0 nM PMID[539063]
NPT116 Cell Line HL-60 Homo sapiens IC50 = 9130.0 nM PMID[539063]
NPT65 Cell Line HepG2 Homo sapiens IC50 = 11570.0 nM PMID[539063]
NPT113 Cell Line RAW264.7 Mus musculus IC50 = 4000.0 nM PMID[539064]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. IC50 = 1.7 ug.mL-1 PMID[539061]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. IC50 = 15760.0 nM PMID[539063]

☑ Note for Activity Records:
☉ The quantitative biological activities were primarily integrated from ChEMBL (Version-30) database and were also directly collected from PubMed literature. PubMed PMID was provided as the reference link for each activity record.

  Chemically structural similarity: I. Similar Active Natural Products in NPASS

Top-200 similar NPs were calculated against the active-NP-set (includes 4,3285 NPs with experimentally-derived bioactivity available in NPASS)

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC283849 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
0.9899 High Similarity NPC476123
0.9899 High Similarity NPC177246
0.9899 High Similarity NPC28198
0.9899 High Similarity NPC284807
0.98 High Similarity NPC237503
0.98 High Similarity NPC204407
0.98 High Similarity NPC57362
0.98 High Similarity NPC167383
0.98 High Similarity NPC127853
0.98 High Similarity NPC306746
0.9798 High Similarity NPC473538
0.9703 High Similarity NPC475296
0.9703 High Similarity NPC174679
0.9703 High Similarity NPC476880
0.9703 High Similarity NPC7870
0.9703 High Similarity NPC59804
0.9703 High Similarity NPC476881
0.9703 High Similarity NPC110139
0.9703 High Similarity NPC476884
0.9703 High Similarity NPC136877
0.9703 High Similarity NPC56713
0.9703 High Similarity NPC476887
0.9703 High Similarity NPC274507
0.9703 High Similarity NPC199457
0.9703 High Similarity NPC476882
0.9703 High Similarity NPC474589
0.9703 High Similarity NPC102914
0.9703 High Similarity NPC29069
0.9703 High Similarity NPC476885
0.9703 High Similarity NPC164194
0.9703 High Similarity NPC476883
0.9703 High Similarity NPC75747
0.9703 High Similarity NPC90856
0.9703 High Similarity NPC127056
0.9703 High Similarity NPC270667
0.9703 High Similarity NPC279554
0.9703 High Similarity NPC68419
0.9703 High Similarity NPC108709
0.9703 High Similarity NPC476886
0.9703 High Similarity NPC242611
0.9697 High Similarity NPC475611
0.9608 High Similarity NPC473481
0.9608 High Similarity NPC297208
0.9608 High Similarity NPC235841
0.9608 High Similarity NPC31839
0.9608 High Similarity NPC179434
0.9608 High Similarity NPC30397
0.9608 High Similarity NPC164419
0.9608 High Similarity NPC108748
0.9608 High Similarity NPC191763
0.9608 High Similarity NPC211798
0.9604 High Similarity NPC137917
0.9515 High Similarity NPC292677
0.9515 High Similarity NPC257468
0.9515 High Similarity NPC475504
0.9515 High Similarity NPC469946
0.9515 High Similarity NPC100383
0.9515 High Similarity NPC471383
0.9515 High Similarity NPC101744
0.9515 High Similarity NPC473373
0.9515 High Similarity NPC116794
0.9515 High Similarity NPC109079
0.9515 High Similarity NPC10320
0.9515 High Similarity NPC128925
0.9515 High Similarity NPC79718
0.9515 High Similarity NPC48249
0.9515 High Similarity NPC256798
0.9515 High Similarity NPC80843
0.9515 High Similarity NPC102439
0.9515 High Similarity NPC471967
0.9515 High Similarity NPC139894
0.9515 High Similarity NPC473383
0.9515 High Similarity NPC475516
0.9515 High Similarity NPC139044
0.9515 High Similarity NPC324875
0.9515 High Similarity NPC1046
0.9515 High Similarity NPC104400
0.9515 High Similarity NPC46388
0.9515 High Similarity NPC104071
0.9515 High Similarity NPC37739
0.9515 High Similarity NPC276093
0.951 High Similarity NPC269095
0.951 High Similarity NPC220984
0.951 High Similarity NPC78046
0.9423 High Similarity NPC219180
0.9423 High Similarity NPC251263
0.9423 High Similarity NPC163183
0.9423 High Similarity NPC269315
0.9423 High Similarity NPC151543
0.9423 High Similarity NPC189884
0.9423 High Similarity NPC73318
0.9423 High Similarity NPC174720
0.9423 High Similarity NPC271138
0.9423 High Similarity NPC96641
0.9423 High Similarity NPC241909
0.9423 High Similarity NPC309714
0.9423 High Similarity NPC295823
0.9423 High Similarity NPC166422
0.9423 High Similarity NPC473826
0.9423 High Similarity NPC473343
0.9423 High Similarity NPC138334
0.9423 High Similarity NPC238935
0.9423 High Similarity NPC47063
0.9423 High Similarity NPC258885
0.9423 High Similarity NPC133818
0.9423 High Similarity NPC323341
0.9423 High Similarity NPC204458
0.9423 High Similarity NPC192600
0.9423 High Similarity NPC114304
0.9423 High Similarity NPC134835
0.9423 High Similarity NPC475208
0.9423 High Similarity NPC114287
0.9423 High Similarity NPC475287
0.9423 High Similarity NPC150400
0.9423 High Similarity NPC46665
0.9423 High Similarity NPC475467
0.9423 High Similarity NPC155410
0.9423 High Similarity NPC124296
0.9333 High Similarity NPC227551
0.9333 High Similarity NPC79643
0.9333 High Similarity NPC236638
0.9333 High Similarity NPC161717
0.9333 High Similarity NPC298034
0.9333 High Similarity NPC57484
0.9333 High Similarity NPC164389
0.9333 High Similarity NPC294453
0.9333 High Similarity NPC204414
0.9333 High Similarity NPC41061
0.9333 High Similarity NPC469782
0.9333 High Similarity NPC475486
0.9333 High Similarity NPC250247
0.9333 High Similarity NPC305981
0.9333 High Similarity NPC476068
0.9333 High Similarity NPC475140
0.9333 High Similarity NPC60557
0.9333 High Similarity NPC65105
0.9333 High Similarity NPC43550
0.9333 High Similarity NPC473714
0.9333 High Similarity NPC70809
0.9333 High Similarity NPC261506
0.9333 High Similarity NPC71065
0.9333 High Similarity NPC67857
0.9333 High Similarity NPC471385
0.9333 High Similarity NPC76972
0.9333 High Similarity NPC123199
0.9333 High Similarity NPC475633
0.9333 High Similarity NPC475160
0.9333 High Similarity NPC202828
0.9333 High Similarity NPC4328
0.9333 High Similarity NPC309907
0.9333 High Similarity NPC100639
0.9333 High Similarity NPC293330
0.9333 High Similarity NPC471550
0.9333 High Similarity NPC224381
0.9333 High Similarity NPC54636
0.9333 High Similarity NPC119592
0.9314 High Similarity NPC285576
0.9245 High Similarity NPC37134
0.9245 High Similarity NPC51465
0.9245 High Similarity NPC291903
0.9245 High Similarity NPC471384
0.9245 High Similarity NPC160415
0.9245 High Similarity NPC75287
0.9245 High Similarity NPC26626
0.9245 High Similarity NPC288205
0.9245 High Similarity NPC161674
0.9245 High Similarity NPC305267
0.9245 High Similarity NPC58448
0.9245 High Similarity NPC476992
0.9231 High Similarity NPC190837
0.9208 High Similarity NPC173583
0.9159 High Similarity NPC475119
0.9159 High Similarity NPC185466
0.9159 High Similarity NPC220160
0.9159 High Similarity NPC309223
0.9159 High Similarity NPC102505
0.9159 High Similarity NPC33012
0.9159 High Similarity NPC104137
0.9159 High Similarity NPC323359
0.9159 High Similarity NPC475514
0.9159 High Similarity NPC68175
0.9159 High Similarity NPC85154
0.9159 High Similarity NPC473405
0.9159 High Similarity NPC123522
0.9159 High Similarity NPC191827
0.9159 High Similarity NPC69811
0.9159 High Similarity NPC473452
0.9159 High Similarity NPC8524
0.9159 High Similarity NPC148417
0.9159 High Similarity NPC470876
0.9159 High Similarity NPC286457
0.9159 High Similarity NPC110633
0.9159 High Similarity NPC471547
0.9159 High Similarity NPC473824
0.9159 High Similarity NPC475209
0.9159 High Similarity NPC300419
0.9159 High Similarity NPC136768
0.9143 High Similarity NPC212968
0.9143 High Similarity NPC195132
0.9143 High Similarity NPC65590

  Chemically structural similarity: II. Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC283849 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.8857 High Similarity NPD8132 Clinical (unspecified phase)
0.8673 High Similarity NPD8328 Phase 3
0.8636 High Similarity NPD8295 Clinical (unspecified phase)
0.8318 Intermediate Similarity NPD6412 Phase 2
0.8317 Intermediate Similarity NPD7748 Approved
0.8252 Intermediate Similarity NPD7902 Approved
0.8198 Intermediate Similarity NPD8133 Approved
0.8119 Intermediate Similarity NPD7515 Phase 2
0.8073 Intermediate Similarity NPD6686 Approved
0.7961 Intermediate Similarity NPD7900 Approved
0.7961 Intermediate Similarity NPD7901 Clinical (unspecified phase)
0.7899 Intermediate Similarity NPD7507 Approved
0.7778 Intermediate Similarity NPD8294 Approved
0.7778 Intermediate Similarity NPD8377 Approved
0.7769 Intermediate Similarity NPD7736 Approved
0.7712 Intermediate Similarity NPD8380 Approved
0.7712 Intermediate Similarity NPD8335 Approved
0.7712 Intermediate Similarity NPD8378 Approved
0.7712 Intermediate Similarity NPD8379 Approved
0.7712 Intermediate Similarity NPD8033 Approved
0.7712 Intermediate Similarity NPD8296 Approved
0.7705 Intermediate Similarity NPD7319 Approved
0.7607 Intermediate Similarity NPD7327 Approved
0.7607 Intermediate Similarity NPD7328 Approved
0.7596 Intermediate Similarity NPD8034 Phase 2
0.7596 Intermediate Similarity NPD8035 Phase 2
0.7542 Intermediate Similarity NPD7516 Approved
0.7541 Intermediate Similarity NPD8293 Discontinued
0.7449 Intermediate Similarity NPD7645 Phase 2
0.7417 Intermediate Similarity NPD8515 Approved
0.7417 Intermediate Similarity NPD8516 Approved
0.7417 Intermediate Similarity NPD8517 Approved
0.7417 Intermediate Similarity NPD8513 Phase 3
0.7417 Intermediate Similarity NPD7503 Approved
0.7358 Intermediate Similarity NPD6399 Phase 3
0.7355 Intermediate Similarity NPD6370 Approved
0.7353 Intermediate Similarity NPD7520 Clinical (unspecified phase)
0.7339 Intermediate Similarity NPD7638 Approved
0.7328 Intermediate Similarity NPD6882 Approved
0.7328 Intermediate Similarity NPD8297 Approved
0.7273 Intermediate Similarity NPD7640 Approved
0.7273 Intermediate Similarity NPD7639 Approved
0.7257 Intermediate Similarity NPD5739 Approved
0.7257 Intermediate Similarity NPD7128 Approved
0.7257 Intermediate Similarity NPD6675 Approved
0.7257 Intermediate Similarity NPD6402 Approved
0.7236 Intermediate Similarity NPD7492 Approved
0.7227 Intermediate Similarity NPD6009 Approved
0.7217 Intermediate Similarity NPD4061 Clinical (unspecified phase)
0.719 Intermediate Similarity NPD6059 Approved
0.719 Intermediate Similarity NPD6054 Approved
0.7177 Intermediate Similarity NPD6616 Approved
0.7168 Intermediate Similarity NPD8170 Clinical (unspecified phase)
0.7154 Intermediate Similarity NPD6067 Discontinued
0.713 Intermediate Similarity NPD7320 Approved
0.713 Intermediate Similarity NPD6881 Approved
0.713 Intermediate Similarity NPD5345 Clinical (unspecified phase)
0.713 Intermediate Similarity NPD6899 Approved
0.712 Intermediate Similarity NPD7078 Approved
0.7119 Intermediate Similarity NPD4632 Approved
0.7103 Intermediate Similarity NPD6411 Approved
0.7094 Intermediate Similarity NPD8130 Phase 1
0.7083 Intermediate Similarity NPD7115 Discovery
0.7069 Intermediate Similarity NPD6373 Approved
0.7069 Intermediate Similarity NPD6372 Approved
0.7049 Intermediate Similarity NPD6319 Approved
0.7043 Intermediate Similarity NPD5701 Approved
0.7043 Intermediate Similarity NPD5697 Approved
0.7009 Intermediate Similarity NPD6883 Approved
0.7009 Intermediate Similarity NPD7102 Approved
0.7009 Intermediate Similarity NPD7290 Approved
0.6992 Remote Similarity NPD6016 Approved
0.6992 Remote Similarity NPD6015 Approved
0.6981 Remote Similarity NPD7513 Clinical (unspecified phase)
0.6952 Remote Similarity NPD3618 Phase 1
0.6949 Remote Similarity NPD6869 Approved
0.6949 Remote Similarity NPD6649 Approved
0.6949 Remote Similarity NPD6847 Approved
0.6949 Remote Similarity NPD6650 Approved
0.6949 Remote Similarity NPD8413 Clinical (unspecified phase)
0.6949 Remote Similarity NPD6617 Approved
0.6937 Remote Similarity NPD6084 Phase 2
0.6937 Remote Similarity NPD6083 Phase 2
0.6935 Remote Similarity NPD5988 Approved
0.6923 Remote Similarity NPD6014 Approved
0.6923 Remote Similarity NPD6012 Approved
0.6923 Remote Similarity NPD6013 Approved
0.6923 Remote Similarity NPD4786 Approved
0.6916 Remote Similarity NPD6101 Approved
0.6916 Remote Similarity NPD5764 Clinical (unspecified phase)
0.6916 Remote Similarity NPD5328 Approved
0.6893 Remote Similarity NPD3667 Approved
0.6887 Remote Similarity NPD3573 Approved
0.6875 Remote Similarity NPD4225 Approved
0.6864 Remote Similarity NPD5955 Clinical (unspecified phase)
0.6838 Remote Similarity NPD6011 Approved
0.6807 Remote Similarity NPD6401 Clinical (unspecified phase)
0.6792 Remote Similarity NPD7334 Approved
0.6792 Remote Similarity NPD7146 Approved
0.6792 Remote Similarity NPD6684 Approved
0.6792 Remote Similarity NPD5330 Approved
0.6792 Remote Similarity NPD7521 Approved
0.6792 Remote Similarity NPD6409 Approved
0.6789 Remote Similarity NPD6079 Approved
0.6786 Remote Similarity NPD4755 Approved
0.6759 Remote Similarity NPD7285 Clinical (unspecified phase)
0.6746 Remote Similarity NPD7604 Phase 2
0.6727 Remote Similarity NPD4202 Approved
0.6727 Remote Similarity NPD8171 Discontinued
0.672 Remote Similarity NPD5983 Phase 2
0.6699 Remote Similarity NPD7525 Registered
0.6697 Remote Similarity NPD46 Approved
0.6697 Remote Similarity NPD6698 Approved
0.6696 Remote Similarity NPD7632 Discontinued
0.6667 Remote Similarity NPD6008 Approved
0.6667 Remote Similarity NPD6033 Approved
0.6667 Remote Similarity NPD4696 Approved
0.6667 Remote Similarity NPD6672 Approved
0.6667 Remote Similarity NPD4700 Approved
0.6667 Remote Similarity NPD5286 Approved
0.6667 Remote Similarity NPD5285 Approved
0.6667 Remote Similarity NPD5737 Approved
0.6667 Remote Similarity NPD6903 Approved
0.6641 Remote Similarity NPD6336 Discontinued
0.661 Remote Similarity NPD5954 Clinical (unspecified phase)
0.6607 Remote Similarity NPD5695 Phase 3
0.6604 Remote Similarity NPD3665 Phase 1
0.6604 Remote Similarity NPD3133 Approved
0.6604 Remote Similarity NPD3666 Approved
0.6589 Remote Similarity NPD8074 Phase 3
0.6585 Remote Similarity NPD6274 Approved
0.6585 Remote Similarity NPD6940 Discontinued
0.6583 Remote Similarity NPD4634 Approved
0.6579 Remote Similarity NPD5696 Approved
0.6577 Remote Similarity NPD5779 Approved
0.6577 Remote Similarity NPD5778 Approved
0.6569 Remote Similarity NPD6116 Phase 1
0.656 Remote Similarity NPD7100 Approved
0.656 Remote Similarity NPD7101 Approved
0.6552 Remote Similarity NPD4633 Approved
0.6552 Remote Similarity NPD5224 Approved
0.6552 Remote Similarity NPD5211 Phase 2
0.6552 Remote Similarity NPD5225 Approved
0.6552 Remote Similarity NPD5226 Approved
0.6549 Remote Similarity NPD5222 Approved
0.6549 Remote Similarity NPD5220 Clinical (unspecified phase)
0.6549 Remote Similarity NPD4697 Phase 3
0.6549 Remote Similarity NPD5221 Approved
0.6505 Remote Similarity NPD6115 Approved
0.6505 Remote Similarity NPD6697 Approved
0.6505 Remote Similarity NPD6118 Approved
0.6505 Remote Similarity NPD6114 Approved
0.6496 Remote Similarity NPD5175 Approved
0.6496 Remote Similarity NPD5174 Approved
0.6491 Remote Similarity NPD5173 Approved
0.6486 Remote Similarity NPD7983 Approved
0.648 Remote Similarity NPD6335 Approved
0.6471 Remote Similarity NPD6117 Approved
0.6466 Remote Similarity NPD5223 Approved
0.646 Remote Similarity NPD6356 Clinical (unspecified phase)
0.6457 Remote Similarity NPD6908 Approved
0.6457 Remote Similarity NPD6921 Approved
0.6457 Remote Similarity NPD6909 Approved
0.6455 Remote Similarity NPD4753 Phase 2
0.6452 Remote Similarity NPD6868 Approved
0.6449 Remote Similarity NPD3668 Phase 3
0.6441 Remote Similarity NPD5141 Approved
0.6404 Remote Similarity NPD7614 Phase 1
0.6404 Remote Similarity NPD7732 Phase 3
0.64 Remote Similarity NPD6317 Approved
0.6387 Remote Similarity NPD4767 Approved
0.6387 Remote Similarity NPD4768 Approved
0.6356 Remote Similarity NPD4754 Approved
0.6355 Remote Similarity NPD3669 Approved
0.6355 Remote Similarity NPD3670 Clinical (unspecified phase)
0.6349 Remote Similarity NPD6314 Approved
0.6349 Remote Similarity NPD6313 Approved
0.6343 Remote Similarity NPD8449 Approved
0.633 Remote Similarity NPD6098 Approved
0.6325 Remote Similarity NPD5344 Discontinued
0.6321 Remote Similarity NPD1779 Approved
0.6321 Remote Similarity NPD1780 Approved
0.6306 Remote Similarity NPD6904 Approved
0.6306 Remote Similarity NPD6673 Approved
0.6306 Remote Similarity NPD6080 Approved
0.6296 Remote Similarity NPD8450 Suspended
0.6293 Remote Similarity NPD8029 Clinical (unspecified phase)
0.6281 Remote Similarity NPD4729 Approved
0.6281 Remote Similarity NPD5128 Approved
0.6281 Remote Similarity NPD4730 Approved
0.6275 Remote Similarity NPD6113 Clinical (unspecified phase)
0.6262 Remote Similarity NPD4752 Clinical (unspecified phase)
0.6226 Remote Similarity NPD4695 Discontinued
0.6224 Remote Similarity NPD7625 Phase 1
0.6214 Remote Similarity NPD6942 Approved
0.6214 Remote Similarity NPD7339 Approved
0.621 Remote Similarity NPD6053 Discontinued
0.6202 Remote Similarity NPD6291 Clinical (unspecified phase)
0.6195 Remote Similarity NPD5281 Approved
0.6195 Remote Similarity NPD7637 Suspended

  Bioactivity similarity: Similar Natural Products in NPASS

Bioactivity similarity was calculated based on bioactivity descriptors of compounds. The bioactivity descriptors were calculated by a recently developed AI algorithm Chemical Checker (CC) [Nature Biotechnology, 38:1087–1096, 2020; Nature Communications, 12:3932, 2021], which evaluated bioactivity similarities at five levels:
A: chemistry similarity;
B: biological targets similarity;
C: networks similarity;
D: cell-based bioactivity similarity;
E: similarity based on clinical data.

Those 5 categories of CC bioactivity descriptors were calculated and then subjected to manifold projection using UMAP algorithm, to project all NPs on a 2-Dimensional space. The current NP was highlighted with a small circle in the 2-D map. Below figures: left-to-right, A-to-E.

A: chemistry similarity
B: biological targets similarity
C: networks similarity
D: cell-based bioactivity similarity
E: similarity based on clinical data