Structure

Physi-Chem Properties

Molecular Weight:  942.52
Volume:  923.263
LogP:  2.369
LogD:  1.745
LogS:  -3.399
# Rotatable Bonds:  9
TPSA:  294.98
# H-Bond Aceptor:  18
# H-Bond Donor:  11
# Rings:  8
# Heavy Atoms:  18

MedChem Properties

QED Drug-Likeness Score:  0.112
Synthetic Accessibility Score:  6.408
Fsp3:  0.938
Lipinski Rule-of-5:  Rejected
Pfizer Rule:  Accepted
GSK Rule:  Rejected
BMS Rule:  1
Golden Triangle Rule:  Rejected
Chelating Alert:  0
PAINS Alert:  0

ADMET Properties (ADMETlab2.0)

ADMET: Absorption

Caco-2 Permeability:  -6.076
MDCK Permeability:  4.6290468162624165e-05
Pgp-inhibitor:  0.667
Pgp-substrate:  0.008
Human Intestinal Absorption (HIA):  0.952
20% Bioavailability (F20%):  0.372
30% Bioavailability (F30%):  0.997

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB):  0.108
Plasma Protein Binding (PPB):  74.36750793457031%
Volume Distribution (VD):  0.133
Pgp-substrate:  14.445589065551758%

ADMET: Metabolism

CYP1A2-inhibitor:  0.001
CYP1A2-substrate:  0.229
CYP2C19-inhibitor:  0.001
CYP2C19-substrate:  0.202
CYP2C9-inhibitor:  0.0
CYP2C9-substrate:  0.011
CYP2D6-inhibitor:  0.003
CYP2D6-substrate:  0.059
CYP3A4-inhibitor:  0.052
CYP3A4-substrate:  0.007

ADMET: Excretion

Clearance (CL):  0.541
Half-life (T1/2):  0.767

ADMET: Toxicity

hERG Blockers:  0.078
Human Hepatotoxicity (H-HT):  0.189
Drug-inuced Liver Injury (DILI):  0.043
AMES Toxicity:  0.097
Rat Oral Acute Toxicity:  0.148
Maximum Recommended Daily Dose:  0.852
Skin Sensitization:  0.178
Carcinogencity:  0.022
Eye Corrosion:  0.003
Eye Irritation:  0.007
Respiratory Toxicity:  0.97

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General Info & Identifiers & Properties  
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Similar NPs/Drugs  

  Natural Product: NPC236657

Natural Product ID:  NPC236657
Common Name*:   Soyasaponin I
IUPAC Name:   (2S,3S,4S,5R,6R)-6-[[(3S,4S,4aR,6aR,6bS,8aR,9R,12aS,14aR,14bR)-9-hydroxy-4-(hydroxymethyl)-4,6a,6b,8a,11,11,14b-heptamethyl-1,2,3,4a,5,6,7,8,9,10,12,12a,14,14a-tetradecahydropicen-3-yl]oxy]-5-[(2S,3R,4S,5R,6R)-4,5-dihydroxy-6-(hydroxymethyl)-3-[(2S,3R,4R,5R,6S)-3,4,5-trihydroxy-6-methyloxan-2-yl]oxyoxan-2-yl]oxy-3,4-dihydroxyoxane-2-carboxylic acid
Synonyms:   Soyasaponin I
Standard InCHIKey:  PTDAHAWQAGSZDD-IOVCITQVSA-N
Standard InCHI:  InChI=1S/C48H78O18/c1-21-29(52)31(54)35(58)40(61-21)65-37-32(55)30(53)24(19-49)62-41(37)66-38-34(57)33(56)36(39(59)60)64-42(38)63-28-12-13-45(5)25(46(28,6)20-50)11-14-48(8)26(45)10-9-22-23-17-43(2,3)18-27(51)44(23,4)15-16-47(22,48)7/h9,21,23-38,40-42,49-58H,10-20H2,1-8H3,(H,59,60)/t21-,23-,24+,25+,26+,27+,28-,29-,30-,31+,32-,33-,34-,35+,36-,37+,38+,40-,41-,42+,44+,45-,46+,47+,48+/m0/s1
SMILES:  C[C@H]1[C@@H]([C@H]([C@H]([C@@H](O1)O[C@@H]1[C@H]([C@H]([C@@H](CO)O[C@H]1O[C@@H]1[C@H]([C@@H]([C@@H](C(=O)O)O[C@H]1O[C@H]1CC[C@@]2(C)[C@@H](CC[C@]3(C)[C@@H]2CC=C2[C@@H]4CC(C)(C)C[C@H]([C@]4(C)CC[C@@]32C)O)[C@@]1(C)CO)O)O)O)O)O)O)O
Synthetic Gene Cluster:   n.a.
ChEMBL Identifier:   CHEMBL511016
PubChem CID:   122097
Chemical Classification**:  
  • CHEMONTID:0000000 [Organic compounds]
    • [CHEMONTID:0000012] Lipids and lipid-like molecules
      • [CHEMONTID:0000259] Prenol lipids
        • [CHEMONTID:0002049] Terpene glycosides
          • [CHEMONTID:0001580] Triterpene glycosides
            • [CHEMONTID:0002358] Triterpene saponins

*Note: the InCHIKey will be temporarily assigned as the "Common Name" if no IUPAC name or alternative short name is available.
**Note: the Chemical Classification was calculated by NPClassifier Version 1.5. Reference: PMID:34662515.

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO25932 Delphinium barbeyi Species Ranunculaceae Eukaryota n.a. n.a. n.a. DOI[10.1021/jf00025a020]
NPO24846 Astragalus membranaceus Species Fabaceae Eukaryota n.a. root n.a. DOI[10.1021/np50075a009]
NPO19231 Sophora flavescens Species Fabaceae Eukaryota n.a. n.a. n.a. PMID[10654410]
NPO19231 Sophora flavescens Species Fabaceae Eukaryota n.a. root n.a. PMID[10843587]
NPO20620 Eucalyptus cypellocarpa Species Myrtaceae Eukaryota n.a. n.a. n.a. PMID[11000030]
NPO20142 Embelia schimperi Species Primulaceae Eukaryota n.a. n.a. n.a. PMID[11054840]
NPO5743 Salvia miltiorrhiza Species Lamiaceae Eukaryota n.a. root n.a. PMID[11374966]
NPO9446 Asterias rathbuni Species Asteriidae Eukaryota n.a. n.a. n.a. PMID[11473430]
NPO29463 Pogostemon cablin Species Lamiaceae Eukaryota n.a. stem n.a. PMID[12575075]
NPO29463 Pogostemon cablin Species Lamiaceae Eukaryota n.a. leaf n.a. PMID[12575075]
NPO40955 Wistaria brachybotrys Species n.a. n.a. n.a. n.a. n.a. PMID[1294698]
NPO2280 Streptomyces griseochromogenes Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[12964155]
NPO18668 Asimina parviflora Species Annonaceae Eukaryota twigs n.a. n.a. PMID[1453182]
NPO19667 Hypericum styphelioides Species Hypericaceae Eukaryota n.a. leaf n.a. PMID[15165152]
NPO19667 Hypericum styphelioides Species Hypericaceae Eukaryota leaves n.a. n.a. PMID[15165152]
NPO19231 Sophora flavescens Species Fabaceae Eukaryota Roots n.a. n.a. PMID[15568770]
NPO29463 Pogostemon cablin Species Lamiaceae Eukaryota n.a. whole plant n.a. PMID[15577255]
NPO15715 Astragalus mongholicus Species Fabaceae Eukaryota n.a. root n.a. PMID[15763368]
NPO18286 Lycogala epidendrum Species Enteridiidae Eukaryota n.a. n.a. n.a. PMID[15911254]
NPO5743 Salvia miltiorrhiza Species Lamiaceae Eukaryota n.a. n.a. n.a. PMID[16038550]
NPO11789 Swertia decussata Species Gentianaceae Eukaryota n.a. n.a. n.a. PMID[16286309]
NPO19231 Sophora flavescens Species Fabaceae Eukaryota n.a. root n.a. PMID[16392664]
NPO19231 Sophora flavescens Species Fabaceae Eukaryota n.a. root n.a. PMID[16933887]
NPO19231 Sophora flavescens Species Fabaceae Eukaryota roots Hualien Hsien, Taiwan 2003-JUL PMID[16933887]
NPO24846 Astragalus membranaceus Species Fabaceae Eukaryota n.a. root n.a. PMID[17253088]
NPO5743 Salvia miltiorrhiza Species Lamiaceae Eukaryota n.a. n.a. n.a. PMID[17583950]
NPO19231 Sophora flavescens Species Fabaceae Eukaryota n.a. root n.a. PMID[17951038]
NPO19231 Sophora flavescens Species Fabaceae Eukaryota n.a. n.a. n.a. PMID[18175961]
NPO20879 Clerodendrum bungei Species Lamiaceae Eukaryota n.a. n.a. n.a. PMID[18348535]
NPO733 Pseudoceratina arabica Species Pseudoceratinidae Eukaryota n.a. Red Sea n.a. PMID[18598078]
NPO5743 Salvia miltiorrhiza Species Lamiaceae Eukaryota n.a. n.a. n.a. PMID[18855446]
NPO18176 Ephedra sinica Species Ephedraceae Eukaryota n.a. root n.a. PMID[18975262]
NPO2280 Streptomyces griseochromogenes Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[19191560]
NPO3152 Morella rubra Species Myricaceae Eukaryota n.a. n.a. n.a. PMID[19407970]
NPO40955 Wistaria brachybotrys Species n.a. n.a. n.a. n.a. n.a. PMID[1955883]
NPO5743 Salvia miltiorrhiza Species Lamiaceae Eukaryota n.a. n.a. n.a. PMID[20455578]
NPO10718 Trigonostemon xyphophylloides Species Euphorbiaceae Eukaryota Stems n.a. n.a. PMID[20593838]
NPO9892 Aspergillus taichungensis Species Aspergillaceae Eukaryota n.a. mycelium n.a. PMID[21486068]
NPO9892 Aspergillus taichungensis Species Aspergillaceae Eukaryota isolated from the root soil of the mangrove plant Acrostichum aureum n.a. n.a. PMID[21486068]
NPO9892 Aspergillus taichungensis Species Aspergillaceae Eukaryota a root soil fungus isolated from the mangrove plant Acrostichum aureum n.a. n.a. PMID[21486068]
NPO3152 Morella rubra Species Myricaceae Eukaryota n.a. bark n.a. PMID[21553897]
NPO20835 Medicago truncatula Species Fabaceae Eukaryota n.a. root n.a. PMID[21615146]
NPO12644 Lunularia cruciata Species Lunulariaceae Eukaryota n.a. n.a. n.a. PMID[21625478]
NPO5743 Salvia miltiorrhiza Species Lamiaceae Eukaryota n.a. n.a. n.a. PMID[21775156]
NPO5743 Salvia miltiorrhiza Species Lamiaceae Eukaryota n.a. n.a. n.a. PMID[23286284]
NPO2280 Streptomyces griseochromogenes Species Streptomycetaceae Bacteria n.a. n.a. n.a. PMID[23377931]
NPO5743 Salvia miltiorrhiza Species Lamiaceae Eukaryota n.a. n.a. n.a. PMID[24108414]
NPO19231 Sophora flavescens Species Fabaceae Eukaryota n.a. n.a. n.a. PMID[24295087]
NPO18176 Ephedra sinica Species Ephedraceae Eukaryota n.a. n.a. n.a. PMID[24333010]
NPO20598 Lythrum salicaria Species Lythraceae Eukaryota n.a. n.a. n.a. PMID[24459770]
NPO24846 Astragalus membranaceus Species Fabaceae Eukaryota n.a. n.a. n.a. PMID[25068786]
NPO3292 Desmodium styracifolium Species Fabaceae Eukaryota n.a. n.a. n.a. PMID[25620156]
NPO15715 Astragalus mongholicus Species Fabaceae Eukaryota n.a. n.a. n.a. PMID[25844502]
NPO5743 Salvia miltiorrhiza Species Lamiaceae Eukaryota n.a. n.a. n.a. PMID[27569393]
NPO19231 Sophora flavescens Species Fabaceae Eukaryota n.a. n.a. n.a. PMID[27575476]
NPO4734 Syzygium nervosum Species Myrtaceae Eukaryota n.a. n.a. n.a. PMID[27797185]
NPO5743 Salvia miltiorrhiza Species Lamiaceae Eukaryota n.a. n.a. n.a. PMID[29185738]
NPO40387 Trigonella stellata Species Fabaceae Eukaryota n.a. n.a. n.a. PMID[29676912]
NPO29463 Pogostemon cablin Species Lamiaceae Eukaryota n.a. n.a. n.a. PMID[30188125]
NPO19231 Sophora flavescens Species Fabaceae Eukaryota Roots n.a. n.a. PMID[30298740]
NPO5743 Salvia miltiorrhiza Species Lamiaceae Eukaryota n.a. n.a. n.a. PMID[30351923]
NPO24846 Astragalus membranaceus Species Fabaceae Eukaryota n.a. n.a. n.a. PMID[30758201]
NPO12644 Lunularia cruciata Species Lunulariaceae Eukaryota n.a. n.a. n.a. PMID[30848895]
NPO5743 Salvia miltiorrhiza Species Lamiaceae Eukaryota n.a. root n.a. PMID[3655791]
NPO5743 Salvia miltiorrhiza Species Lamiaceae Eukaryota roots n.a. n.a. PMID[9834151]
NPO19231 Sophora flavescens Species Fabaceae Eukaryota Roots n.a. n.a. PMID[9868163]
NPO19231 Sophora flavescens Species Fabaceae Eukaryota n.a. root n.a. Database[Article]
NPO18176 Ephedra sinica Species Ephedraceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO21170 Embelia parviflora Species Primulaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO29463 Pogostemon cablin Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO24846 Astragalus membranaceus Species Fabaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO12056 Chondrodendron tomentosum Species Menispermaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO20598 Lythrum salicaria Species Lythraceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO24178 Citrus rugulosa Species Rutaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO19231 Sophora flavescens Species Fabaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO26606 Macadamia ternifolia Species Proteaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO3292 Desmodium styracifolium Species Fabaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO5743 Salvia miltiorrhiza Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO13524 Pyrola japonica Species Ericaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO25932 Delphinium barbeyi Species Ranunculaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO18286 Lycogala epidendrum Species Enteridiidae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO17334 Onopordum acanthium Species Asteraceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO17542 Aconitum orientale Species Ranunculaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO15715 Astragalus mongholicus Species Fabaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO21375 Euphorbia nematocypha Species Euphorbiaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO7001 Berberis floribunda Species Berberidaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO17315 Ceanothus integerrimus Species Rhamnaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO15715 Astragalus mongholicus Species Fabaceae Eukaryota n.a. n.a. n.a. Database[MetaboLights]
NPO20620 Eucalyptus cypellocarpa Species Myrtaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO20598 Lythrum salicaria Species Lythraceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO8707.1 Pueraria montana var. lobata Varieties Fabaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO15715 Astragalus mongholicus Species Fabaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO8701 Bonamia spectabilis Species Convolvulaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO20879 Clerodendrum bungei Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO20142 Embelia schimperi Species Primulaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO24846 Astragalus membranaceus Species Fabaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO18668 Asimina parviflora Species Annonaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO5743 Salvia miltiorrhiza Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO7001 Berberis floribunda Species Berberidaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO7319 Jamesoniella colorata Species Jungermanniaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO20680 Erythrina melanacantha Species Fabaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO21375 Euphorbia nematocypha Species Euphorbiaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO9452 Pulsatilla campanella Species Ranunculaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO20489 Epilobium hirsutum Species Onagraceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO17542 Aconitum orientale Species Ranunculaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO21170 Embelia parviflora Species Primulaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO3152 Morella rubra Species Myricaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO12056 Chondrodendron tomentosum Species Menispermaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO24178 Citrus rugulosa Species Rutaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO18286 Lycogala epidendrum Species Enteridiidae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO9272 Artocarpus lakoocha Species Moraceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO13524 Pyrola japonica Species Ericaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO25932 Delphinium barbeyi Species Ranunculaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO26606 Macadamia ternifolia Species Proteaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO19231 Sophora flavescens Species Fabaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO17315 Ceanothus integerrimus Species Rhamnaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO17334 Onopordum acanthium Species Asteraceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO18176 Ephedra sinica Species Ephedraceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO8707.2 Pueraria montana var. thomsonii Varieties Fabaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO29463 Pogostemon cablin Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO3292 Desmodium styracifolium Species Fabaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO24846 Astragalus membranaceus Species Fabaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO21170 Embelia parviflora Species Primulaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO3292 Desmodium styracifolium Species Fabaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO15715 Astragalus mongholicus Species Fabaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO19231 Sophora flavescens Species Fabaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO29463 Pogostemon cablin Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO20680 Erythrina melanacantha Species Fabaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO18176 Ephedra sinica Species Ephedraceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO21375 Euphorbia nematocypha Species Euphorbiaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO20598 Lythrum salicaria Species Lythraceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO5743 Salvia miltiorrhiza Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO9272 Artocarpus lakoocha Species Moraceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO13524 Pyrola japonica Species Ericaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO17334 Onopordum acanthium Species Asteraceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO18286 Lycogala epidendrum Species Enteridiidae Eukaryota n.a. n.a. n.a. Database[Title]
NPO8707.2 Pueraria montana var. thomsonii Varieties Fabaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO15715 Astragalus mongholicus Species Fabaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO6792 Hedysarum polybotrys Species Fabaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO5743 Salvia miltiorrhiza Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO13524 Pyrola japonica Species Ericaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO8707.1 Pueraria montana var. lobata Varieties Fabaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO3292 Desmodium styracifolium Species Fabaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO19231 Sophora flavescens Species Fabaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO18176 Ephedra sinica Species Ephedraceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO24846 Astragalus membranaceus Species Fabaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO29463 Pogostemon cablin Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO20142 Embelia schimperi Species Primulaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO24846 Astragalus membranaceus Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO10546 Allagopappus viscosissimus Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO22937 Vernonia fagifolia Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19912 Vellozia nanuzae Species Velloziaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO25932 Delphinium barbeyi Species Ranunculaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO14241 Planchonia grandis Species Asterolecaniidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20835 Medicago truncatula Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO12056 Chondrodendron tomentosum Species Menispermaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20421 Aplophyllum alberti-regelii n.a. n.a. n.a. n.a. n.a. n.a. Database[UNPD]
NPO25819.1 Gueldenstaedtia verna subsp. multiflora Subspecies Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20843 Monsonia senegalensis Species Geraniaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO17542 Aconitum orientale Species Ranunculaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO15338 Lampranthus aurantiacus Species Aizoaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO15715 Astragalus mongholicus Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO5081 Amorphinopsis foetida Species Halichondriidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO12227 Xylopia acutiflora Species Annonaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO12864 Trogoderma granarium Species Dermestidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO12644 Lunularia cruciata Species Lunulariaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO7001 Berberis floribunda Species Berberidaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO6234 Hemsleya panacis-scandens Species Cucurbitaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO15439 Iyengaria stellata Species Scytosiphonaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO8707.1 Pueraria montana var. lobata Varieties Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO17258 Rhinella marina Species Bufonidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO21375 Euphorbia nematocypha Species Euphorbiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO21038 Lemaireocereus longispinus Species Cactaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20598 Lythrum salicaria Species Lythraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19036 Esenbeckia leiocarpa Species Rutaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO4022 Calycocorsus stipitatus n.a. n.a. n.a. n.a. n.a. n.a. Database[UNPD]
NPO19033 Sargassum lacerifolium Species Sargassaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18866 Pteridium esculentum Species Dennstaedtiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18473 Plathymenia reticulata Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO2280 Streptomyces griseochromogenes Species Streptomycetaceae Bacteria n.a. n.a. n.a. Database[UNPD]
NPO24375 Micrococcus luteus Species Micrococcaceae Bacteria n.a. n.a. n.a. Database[UNPD]
NPO12313 Haplophyllum obtusifolium Species Rutaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO7949 Pterodon emarginatus Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO9640 Dinophysis fortii Species Dinophysiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO8398 Cymodocea nodosa Species Cymodoceaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO9272 Artocarpus lakoocha Species Moraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO21631 Faramea salicifolia Species Rubiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO12169 Ranunculus peltatus Species Ranunculaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19231 Sophora flavescens Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO28202 Helichrysum tenuifolium Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO5479 Astragalus wiedemannianus Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO21562 Diospyros assimilis Species Ebenaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO9892 Aspergillus taichungensis Species Aspergillaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO4734 Syzygium nervosum Species Myrtaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO21170 Embelia parviflora Species Primulaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO6572 Dunalia solanacea Species Solanaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO8701 Bonamia spectabilis Species Convolvulaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO23899 Rosulabryum capillare Species Bryaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO3658 Achillea pseudopectinata Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19667 Hypericum styphelioides Species Hypericaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO13524 Pyrola japonica Species Ericaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18286 Lycogala epidendrum Species Enteridiidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO6792 Hedysarum polybotrys Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO3696 Phyllostachys bambusoides Species Poaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO9009 Atuna racemosa Species Chrysobalanaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO8006 Berlinia tomentosa Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO11223 Pleurotus japonicus Species Pleurotaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18143 Dendronephthya griffini Species Nephtheidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO11534 Astragalus spinosus Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO9968 Shigella dysenteriae Species Enterobacteriaceae Bacteria n.a. n.a. n.a. Database[UNPD]
NPO25001 Melampodium pilosum Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO24178 Citrus rugulosa Species Rutaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO10104 Laurencia chilensis Species Rhodomelaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20084 Atraphaxis spinosa Species Polygonaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20624 Simarouba glauca Species Simaroubaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO21243 Siphonaria capensis Species Siphonariidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO3016 Litsea amara Species Lauraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19995 Baccharis neglecta Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19504 Solanum canense Species Solanaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO9495 Lupinus oreophilus Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO21495 Abelia chinensis Species Caprifoliaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO12057 Carlina racemosa Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18668 Asimina parviflora Species Annonaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO16569 Gymnocalycium schickendantzii Species Cactaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO4461 Meretrix petechialis Species Veneridae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO21108 Eria anomala Species Orchidaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18447 Papaver tatricum Species Papaveraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO11628 Mytilus coruscus Species Mytilidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20346 Acacia retinoides Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO17334 Onopordum acanthium Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO7627 Fumaria micrantha Species Papaveraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO11234 Anaglyptus subfasciatus Species Cerambycidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO11056 Xanthoria resendei Species Teloschistaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20489 Epilobium hirsutum Species Onagraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO12284 Hydrangea serrata Species Hydrangeaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO11523 Erysimum leptophyllum Species Brassicaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18176 Ephedra sinica Species Ephedraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19511 Dolabella californica Species Aplysiidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO26606 Macadamia ternifolia Species Proteaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO27367 Latrunculia magnifica Species Latrunculiidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO17849 Centaurea maculosa Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO3292 Desmodium styracifolium Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO6243 Fomes fastuosus Species Coriolaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO5903 Conus mus Species Conidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO10718 Trigonostemon xyphophylloides Species Euphorbiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO22961 Cordia leucocephala Species Cordiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20680 Erythrina melanacantha Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18125 Suillus variegatus Species Suillaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO16141 Piper regnellii Species Piperaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO4910 Lepidosperma ustulatum Species Cyperaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO28072 Theonella conica Species Theonellidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO8707.2 Pueraria montana var. thomsonii Varieties Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO3535 Artemisia lerchiana Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO3152 Morella rubra Species Myricaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO9452 Pulsatilla campanella Species Ranunculaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO9226 Astragalus pycnanthus Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO29463 Pogostemon cablin Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO11789 Swertia decussata Species Gentianaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO4051 Tricholoma columbetta Species Tricholomataceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20620 Eucalyptus cypellocarpa Species Myrtaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO17560 Pancratium sickenbergeri Species Amaryllidaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20277 Pentzia eenii Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18462 Calliactis parasitica Species Hormathiidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO3529 Vachellia schaffnerii Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO3311 Diplacus longiflorus Species Phrymaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO13715 Bertya dimerostigma Species Euphorbiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO4965 Suberites caminatus Species Suberitidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO17315 Ceanothus integerrimus Species Rhamnaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19810 Myxococcus stipitatus Species Myxococcaceae Bacteria n.a. n.a. n.a. Database[UNPD]
NPO2565 Aglaia australiensis Species Meliaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO23334 Ceroplastes albolineatus Species Coccidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO23977 Helichrysum moeserianum Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO20879 Clerodendrum bungei Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO9446 Asterias rathbuni Species Asteriidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO11910 Peltogyne pubescens Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO5743 Salvia miltiorrhiza Species Lamiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO7319 Jamesoniella colorata Species Jungermanniaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19849 Melilotus officinalis Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO13449 Syzygium polycephaloides Species Myrtaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO733 Pseudoceratina arabica Species Pseudoceratinidae Eukaryota n.a. n.a. n.a. Database[UNPD]

☑ Note for Reference:
In addition to directly collecting NP source organism data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated them from below databases:
UNPD: Universal Natural Products Database [PMID: 23638153].
StreptomeDB: a database of streptomycetes natural products [PMID: 33051671].
TM-MC: a database of medicinal materials and chemical compounds in Northeast Asian traditional medicine [PMID: 26156871].
TCM@Taiwan: a Traditional Chinese Medicine database [PMID: 21253603].
TCMID: a Traditional Chinese Medicine database [PMID: 29106634].
TCMSP: The traditional Chinese medicine systems pharmacology database and analysis platform [PMID: 24735618].
HerDing: a herb recommendation system to treat diseases using genes and chemicals [PMID: 26980517].
MetaboLights: a metabolomics database [PMID: 27010336].
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  NP Quantity Composition/Concentration

Organism ID NP ID Organism Material Preparation Organism Part NP Quantity (Standard) NP Quantity (Minimum) NP Quantity (Maximum) Quantity Unit Reference

☑ Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP quantitative records for specific NP domains (e.g., NPS from foods or herbs) from domain-specific databases. These databases include:
DUKE: Dr. Duke's Phytochemical and Ethnobotanical Databases.
PHENOL EXPLORER: is the first comprehensive database on polyphenol content in foods [PMID: 24103452], its homepage can be accessed at here.
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT113 Cell Line RAW264.7 Mus musculus FC = 11.1 n.a. PMID[551733]
NPT113 Cell Line RAW264.7 Mus musculus FC = 8.8 n.a. PMID[551733]
NPT113 Cell Line RAW264.7 Mus musculus FC = 6.8 n.a. PMID[551733]
NPT113 Cell Line RAW264.7 Mus musculus FC = 5.6 n.a. PMID[551733]
NPT270 Individual Protein Nitric oxide synthase, inducible Mus musculus Activity = 24.0 pmol/min PMID[551733]
NPT270 Individual Protein Nitric oxide synthase, inducible Mus musculus Activity = 16.6 pmol/min PMID[551733]
NPT270 Individual Protein Nitric oxide synthase, inducible Mus musculus Activity = 11.7 pmol/min PMID[551733]
NPT270 Individual Protein Nitric oxide synthase, inducible Mus musculus Activity = 9.2 pmol/min PMID[551733]
NPT32 Organism Mus musculus Mus musculus Activity = 40.0 % PMID[551732]
NPT99 Individual Protein Peroxisome proliferator-activated receptor gamma Homo sapiens FC = 1.22 n.a. PMID[551734]
NPT99 Individual Protein Peroxisome proliferator-activated receptor gamma Homo sapiens FC = 1.36 n.a. PMID[551734]
NPT99 Individual Protein Peroxisome proliferator-activated receptor gamma Homo sapiens FC = 1.79 n.a. PMID[551734]
NPT6724 Individual Protein Beta-galactoside alpha-2,6-sialyltransferase 1 Homo sapiens Inhibition = 68.0 % PMID[551735]
NPT27842 SINGLE PROTEIN Sialyltransferase ST3Gal-I Rattus norvegicus Inhibition = 59.0 % PMID[551735]
NPT27842 SINGLE PROTEIN Sialyltransferase ST3Gal-I Rattus norvegicus Inhibition = 83.0 % PMID[551735]

☑ Note for Activity Records:
☉ The quantitative biological activities were primarily integrated from ChEMBL (Version-30) database and were also directly collected from PubMed literature. PubMed PMID was provided as the reference link for each activity record.

  Chemically structural similarity: I. Similar Active Natural Products in NPASS

Top-200 similar NPs were calculated against the active-NP-set (includes 4,3285 NPs with experimentally-derived bioactivity available in NPASS)

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC236657 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
1.0 High Similarity NPC118440
0.991 High Similarity NPC171544
0.991 High Similarity NPC22956
0.991 High Similarity NPC187618
0.991 High Similarity NPC62725
0.991 High Similarity NPC159309
0.991 High Similarity NPC297263
0.991 High Similarity NPC86222
0.991 High Similarity NPC64715
0.991 High Similarity NPC302887
0.991 High Similarity NPC222580
0.991 High Similarity NPC301449
0.991 High Similarity NPC31838
0.991 High Similarity NPC11242
0.991 High Similarity NPC114484
0.991 High Similarity NPC223301
0.991 High Similarity NPC104372
0.9821 High Similarity NPC4749
0.9821 High Similarity NPC80986
0.9821 High Similarity NPC21691
0.9821 High Similarity NPC213952
0.9821 High Similarity NPC131469
0.9821 High Similarity NPC236870
0.9821 High Similarity NPC187290
0.9821 High Similarity NPC162574
0.9821 High Similarity NPC475591
0.9821 High Similarity NPC313110
0.9821 High Similarity NPC10607
0.9735 High Similarity NPC281148
0.9735 High Similarity NPC2370
0.9735 High Similarity NPC302543
0.9735 High Similarity NPC30735
0.9735 High Similarity NPC235405
0.9735 High Similarity NPC200049
0.9735 High Similarity NPC44716
0.9735 High Similarity NPC258617
0.9735 High Similarity NPC283417
0.9735 High Similarity NPC257211
0.973 High Similarity NPC11551
0.973 High Similarity NPC157868
0.973 High Similarity NPC214484
0.973 High Similarity NPC114441
0.973 High Similarity NPC6377
0.973 High Similarity NPC473884
0.973 High Similarity NPC475171
0.973 High Similarity NPC469945
0.973 High Similarity NPC472949
0.973 High Similarity NPC35405
0.973 High Similarity NPC309780
0.973 High Similarity NPC39211
0.973 High Similarity NPC208381
0.973 High Similarity NPC192791
0.973 High Similarity NPC180550
0.9727 High Similarity NPC224121
0.9649 High Similarity NPC470477
0.9649 High Similarity NPC160452
0.9649 High Similarity NPC23275
0.9649 High Similarity NPC471962
0.9649 High Similarity NPC247315
0.9649 High Similarity NPC471963
0.9649 High Similarity NPC33068
0.9646 High Similarity NPC249848
0.9646 High Similarity NPC40775
0.9646 High Similarity NPC235438
0.9646 High Similarity NPC107966
0.964 High Similarity NPC286347
0.9565 High Similarity NPC284449
0.9565 High Similarity NPC475368
0.9565 High Similarity NPC469947
0.9565 High Similarity NPC181066
0.9565 High Similarity NPC470218
0.9561 High Similarity NPC202666
0.9561 High Similarity NPC478066
0.9561 High Similarity NPC262199
0.9561 High Similarity NPC471961
0.9561 High Similarity NPC14617
0.9561 High Similarity NPC471964
0.9558 High Similarity NPC75417
0.9558 High Similarity NPC242840
0.9558 High Similarity NPC31193
0.9474 High Similarity NPC471965
0.9469 High Similarity NPC294112
0.9464 High Similarity NPC109588
0.9459 High Similarity NPC291903
0.9459 High Similarity NPC37134
0.9402 High Similarity NPC470475
0.9397 High Similarity NPC285091
0.9375 High Similarity NPC475119
0.9375 High Similarity NPC300419
0.9375 High Similarity NPC473824
0.9369 High Similarity NPC164389
0.9369 High Similarity NPC475486
0.9322 High Similarity NPC305793
0.9322 High Similarity NPC470912
0.9322 High Similarity NPC244296
0.9322 High Similarity NPC107536
0.9322 High Similarity NPC252289
0.9322 High Similarity NPC280029
0.9322 High Similarity NPC470518
0.9322 High Similarity NPC82380
0.9322 High Similarity NPC88311
0.9322 High Similarity NPC252657
0.9322 High Similarity NPC47995
0.9322 High Similarity NPC9470
0.9322 High Similarity NPC269484
0.9322 High Similarity NPC115656
0.9322 High Similarity NPC472267
0.9322 High Similarity NPC273878
0.9322 High Similarity NPC97918
0.9322 High Similarity NPC1314
0.9322 High Similarity NPC141600
0.9322 High Similarity NPC265841
0.9322 High Similarity NPC11577
0.9304 High Similarity NPC275343
0.9292 High Similarity NPC105800
0.9292 High Similarity NPC232237
0.9286 High Similarity NPC476992
0.9286 High Similarity NPC75287
0.9286 High Similarity NPC26626
0.9286 High Similarity NPC305267
0.9286 High Similarity NPC288205
0.9286 High Similarity NPC51465
0.9244 High Similarity NPC476780
0.9244 High Similarity NPC476774
0.9244 High Similarity NPC271610
0.9244 High Similarity NPC476775
0.9237 High Similarity NPC477194
0.9237 High Similarity NPC477075
0.9237 High Similarity NPC477191
0.9237 High Similarity NPC475281
0.9237 High Similarity NPC329923
0.9237 High Similarity NPC477078
0.9237 High Similarity NPC477192
0.9237 High Similarity NPC470476
0.9237 High Similarity NPC477193
0.9211 High Similarity NPC135849
0.9211 High Similarity NPC51564
0.9211 High Similarity NPC207738
0.9211 High Similarity NPC25663
0.9204 High Similarity NPC473452
0.9204 High Similarity NPC191827
0.9204 High Similarity NPC8524
0.9204 High Similarity NPC475209
0.9204 High Similarity NPC104137
0.9204 High Similarity NPC69811
0.9204 High Similarity NPC123522
0.9204 High Similarity NPC102505
0.9204 High Similarity NPC220160
0.9204 High Similarity NPC470876
0.9204 High Similarity NPC323359
0.9204 High Similarity NPC475514
0.9204 High Similarity NPC33012
0.9204 High Similarity NPC286457
0.9204 High Similarity NPC85154
0.9204 High Similarity NPC309223
0.9189 High Similarity NPC292677
0.9189 High Similarity NPC1046
0.9189 High Similarity NPC109079
0.9189 High Similarity NPC475504
0.9189 High Similarity NPC469946
0.9189 High Similarity NPC471383
0.9189 High Similarity NPC473373
0.9189 High Similarity NPC10320
0.9189 High Similarity NPC80843
0.9189 High Similarity NPC79718
0.9189 High Similarity NPC101744
0.9189 High Similarity NPC139044
0.9189 High Similarity NPC104071
0.9189 High Similarity NPC324875
0.9189 High Similarity NPC257468
0.9189 High Similarity NPC104400
0.9189 High Similarity NPC475516
0.9189 High Similarity NPC276093
0.9189 High Similarity NPC102439
0.9167 High Similarity NPC476776
0.9167 High Similarity NPC30279
0.9167 High Similarity NPC312650
0.9167 High Similarity NPC71391
0.9167 High Similarity NPC192765
0.9167 High Similarity NPC473918
0.9167 High Similarity NPC277212
0.9167 High Similarity NPC46823
0.9167 High Similarity NPC178264
0.916 High Similarity NPC477079
0.916 High Similarity NPC470913
0.916 High Similarity NPC477076
0.916 High Similarity NPC477077
0.916 High Similarity NPC477196
0.9145 High Similarity NPC130229
0.913 High Similarity NPC473645
0.913 High Similarity NPC476991
0.9123 High Similarity NPC237191
0.9123 High Similarity NPC473459
0.9115 High Similarity NPC160415
0.9115 High Similarity NPC161674
0.9115 High Similarity NPC58448
0.9115 High Similarity NPC471384
0.9107 High Similarity NPC473343
0.9107 High Similarity NPC46665
0.9107 High Similarity NPC473826

  Chemically structural similarity: II. Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC236657 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.9561 High Similarity NPD8328 Phase 3
0.9375 High Similarity NPD8295 Clinical (unspecified phase)
0.8261 Intermediate Similarity NPD8132 Clinical (unspecified phase)
0.8016 Intermediate Similarity NPD7736 Approved
0.7983 Intermediate Similarity NPD8133 Approved
0.7823 Intermediate Similarity NPD8516 Approved
0.7823 Intermediate Similarity NPD8515 Approved
0.7823 Intermediate Similarity NPD8517 Approved
0.7823 Intermediate Similarity NPD8513 Phase 3
0.7795 Intermediate Similarity NPD8293 Discontinued
0.7674 Intermediate Similarity NPD7319 Approved
0.7619 Intermediate Similarity NPD6370 Approved
0.76 Intermediate Similarity NPD8294 Approved
0.76 Intermediate Similarity NPD8377 Approved
0.7578 Intermediate Similarity NPD7507 Approved
0.754 Intermediate Similarity NPD8380 Approved
0.754 Intermediate Similarity NPD8335 Approved
0.754 Intermediate Similarity NPD8378 Approved
0.754 Intermediate Similarity NPD8296 Approved
0.754 Intermediate Similarity NPD8379 Approved
0.75 Intermediate Similarity NPD7492 Approved
0.7479 Intermediate Similarity NPD6412 Phase 2
0.746 Intermediate Similarity NPD6054 Approved
0.746 Intermediate Similarity NPD6319 Approved
0.746 Intermediate Similarity NPD6059 Approved
0.7442 Intermediate Similarity NPD6616 Approved
0.7417 Intermediate Similarity NPD5345 Clinical (unspecified phase)
0.7417 Intermediate Similarity NPD6686 Approved
0.7402 Intermediate Similarity NPD8033 Approved
0.7391 Intermediate Similarity NPD7902 Approved
0.7385 Intermediate Similarity NPD7078 Approved
0.7317 Intermediate Similarity NPD8297 Approved
0.7317 Intermediate Similarity NPD6882 Approved
0.7281 Intermediate Similarity NPD7748 Approved
0.7266 Intermediate Similarity NPD6015 Approved
0.7266 Intermediate Similarity NPD6016 Approved
0.7222 Intermediate Similarity NPD6009 Approved
0.7213 Intermediate Similarity NPD6372 Approved
0.7213 Intermediate Similarity NPD6373 Approved
0.7209 Intermediate Similarity NPD5988 Approved
0.7167 Intermediate Similarity NPD8170 Clinical (unspecified phase)
0.7165 Intermediate Similarity NPD7328 Approved
0.7165 Intermediate Similarity NPD7327 Approved
0.713 Intermediate Similarity NPD7901 Clinical (unspecified phase)
0.713 Intermediate Similarity NPD7900 Approved
0.7109 Intermediate Similarity NPD7516 Approved
0.7107 Intermediate Similarity NPD6675 Approved
0.7107 Intermediate Similarity NPD7128 Approved
0.7107 Intermediate Similarity NPD5739 Approved
0.7107 Intermediate Similarity NPD6402 Approved
0.7105 Intermediate Similarity NPD7515 Phase 2
0.7097 Intermediate Similarity NPD8413 Clinical (unspecified phase)
0.7097 Intermediate Similarity NPD6650 Approved
0.7097 Intermediate Similarity NPD6649 Approved
0.7 Intermediate Similarity NPD7503 Approved
0.6992 Remote Similarity NPD6881 Approved
0.6992 Remote Similarity NPD7320 Approved
0.6992 Remote Similarity NPD6899 Approved
0.6984 Remote Similarity NPD4632 Approved
0.696 Remote Similarity NPD8130 Phase 1
0.694 Remote Similarity NPD6033 Approved
0.6911 Remote Similarity NPD5697 Approved
0.6911 Remote Similarity NPD5701 Approved
0.688 Remote Similarity NPD6883 Approved
0.688 Remote Similarity NPD7290 Approved
0.688 Remote Similarity NPD7102 Approved
0.687 Remote Similarity NPD6921 Approved
0.6866 Remote Similarity NPD8074 Phase 3
0.6825 Remote Similarity NPD6617 Approved
0.6825 Remote Similarity NPD6869 Approved
0.6825 Remote Similarity NPD6847 Approved
0.681 Remote Similarity NPD8034 Phase 2
0.681 Remote Similarity NPD8035 Phase 2
0.681 Remote Similarity NPD6411 Approved
0.68 Remote Similarity NPD6012 Approved
0.68 Remote Similarity NPD6013 Approved
0.68 Remote Similarity NPD6014 Approved
0.6767 Remote Similarity NPD7604 Phase 2
0.675 Remote Similarity NPD7638 Approved
0.6746 Remote Similarity NPD4634 Approved
0.6742 Remote Similarity NPD5983 Phase 2
0.672 Remote Similarity NPD6011 Approved
0.6694 Remote Similarity NPD7640 Approved
0.6694 Remote Similarity NPD7639 Approved
0.6693 Remote Similarity NPD6401 Clinical (unspecified phase)
0.6692 Remote Similarity NPD7115 Discovery
0.6667 Remote Similarity NPD6336 Discontinued
0.6638 Remote Similarity NPD5764 Clinical (unspecified phase)
0.6638 Remote Similarity NPD6101 Approved
0.6636 Remote Similarity NPD7645 Phase 2
0.6612 Remote Similarity NPD4225 Approved
0.661 Remote Similarity NPD6399 Phase 3
0.661 Remote Similarity NPD8171 Discontinued
0.6535 Remote Similarity NPD4061 Clinical (unspecified phase)
0.6529 Remote Similarity NPD6084 Phase 2
0.6529 Remote Similarity NPD4755 Approved
0.6529 Remote Similarity NPD6083 Phase 2
0.6525 Remote Similarity NPD7983 Approved
0.6519 Remote Similarity NPD6067 Discontinued
0.6493 Remote Similarity NPD8274 Clinical (unspecified phase)
0.6489 Remote Similarity NPD6274 Approved
0.6486 Remote Similarity NPD7329 Approved
0.6484 Remote Similarity NPD5955 Clinical (unspecified phase)
0.6471 Remote Similarity NPD5778 Approved
0.6471 Remote Similarity NPD5779 Approved
0.6466 Remote Similarity NPD7100 Approved
0.6466 Remote Similarity NPD7101 Approved
0.6446 Remote Similarity NPD4697 Phase 3
0.6444 Remote Similarity NPD8080 Discontinued
0.6435 Remote Similarity NPD7520 Clinical (unspecified phase)
0.6429 Remote Similarity NPD6008 Approved
0.6423 Remote Similarity NPD4700 Approved
0.6423 Remote Similarity NPD5286 Approved
0.6423 Remote Similarity NPD5285 Approved
0.6423 Remote Similarity NPD4696 Approved
0.6391 Remote Similarity NPD6335 Approved
0.6377 Remote Similarity NPD8448 Approved
0.637 Remote Similarity NPD6908 Approved
0.637 Remote Similarity NPD6909 Approved
0.6364 Remote Similarity NPD8387 Clinical (unspecified phase)
0.6364 Remote Similarity NPD6868 Approved
0.6357 Remote Similarity NPD8390 Approved
0.6357 Remote Similarity NPD8391 Approved
0.6357 Remote Similarity NPD8392 Approved
0.6356 Remote Similarity NPD5328 Approved
0.635 Remote Similarity NPD8340 Approved
0.635 Remote Similarity NPD8299 Approved
0.635 Remote Similarity NPD8342 Approved
0.635 Remote Similarity NPD8341 Approved
0.6341 Remote Similarity NPD5696 Approved
0.6338 Remote Similarity NPD8450 Suspended
0.6325 Remote Similarity NPD3573 Approved
0.632 Remote Similarity NPD5226 Approved
0.632 Remote Similarity NPD4633 Approved
0.632 Remote Similarity NPD5224 Approved
0.632 Remote Similarity NPD5225 Approved
0.632 Remote Similarity NPD5211 Phase 2
0.6316 Remote Similarity NPD8137 Clinical (unspecified phase)
0.6316 Remote Similarity NPD6317 Approved
0.6311 Remote Similarity NPD5222 Approved
0.6311 Remote Similarity NPD5221 Approved
0.6311 Remote Similarity NPD5220 Clinical (unspecified phase)
0.6304 Remote Similarity NPD8451 Approved
0.6299 Remote Similarity NPD4768 Approved
0.6299 Remote Similarity NPD4767 Approved
0.6294 Remote Similarity NPD8415 Approved
0.6271 Remote Similarity NPD6672 Approved
0.6271 Remote Similarity NPD5737 Approved
0.627 Remote Similarity NPD5174 Approved
0.627 Remote Similarity NPD5175 Approved
0.6269 Remote Similarity NPD6314 Approved
0.6269 Remote Similarity NPD6313 Approved
0.6268 Remote Similarity NPD8449 Approved
0.6261 Remote Similarity NPD3670 Clinical (unspecified phase)
0.6261 Remote Similarity NPD3669 Approved
0.626 Remote Similarity NPD5173 Approved
0.625 Remote Similarity NPD6079 Approved
0.625 Remote Similarity NPD5954 Clinical (unspecified phase)
0.6241 Remote Similarity NPD5956 Approved
0.624 Remote Similarity NPD5223 Approved
0.6239 Remote Similarity NPD3618 Phase 1
0.623 Remote Similarity NPD5695 Phase 3
0.622 Remote Similarity NPD5141 Approved
0.6218 Remote Similarity NPD7285 Clinical (unspecified phase)
0.6214 Remote Similarity NPD8336 Approved
0.6214 Remote Similarity NPD8337 Approved
0.621 Remote Similarity NPD8029 Clinical (unspecified phase)
0.6207 Remote Similarity NPD7966 Clinical (unspecified phase)
0.6202 Remote Similarity NPD4730 Approved
0.6202 Remote Similarity NPD4729 Approved
0.619 Remote Similarity NPD7632 Discontinued
0.6182 Remote Similarity NPD7799 Discontinued
0.6179 Remote Similarity NPD7839 Suspended
0.6167 Remote Similarity NPD46 Approved
0.6167 Remote Similarity NPD6698 Approved
0.6159 Remote Similarity NPD7830 Approved
0.6159 Remote Similarity NPD7829 Approved
0.6142 Remote Similarity NPD4754 Approved
0.6134 Remote Similarity NPD7513 Clinical (unspecified phase)
0.6131 Remote Similarity NPD6291 Clinical (unspecified phase)
0.6131 Remote Similarity NPD8444 Approved
0.6124 Remote Similarity NPD7899 Clinical (unspecified phase)
0.6107 Remote Similarity NPD5247 Approved
0.6107 Remote Similarity NPD5248 Approved
0.6107 Remote Similarity NPD5250 Approved
0.6107 Remote Similarity NPD5251 Approved
0.6107 Remote Similarity NPD5249 Phase 3
0.6087 Remote Similarity NPD1779 Approved
0.6087 Remote Similarity NPD1780 Approved
0.6084 Remote Similarity NPD7260 Phase 2
0.6077 Remote Similarity NPD5128 Approved
0.6068 Remote Similarity NPD4786 Approved
0.6054 Remote Similarity NPD6334 Approved
0.6054 Remote Similarity NPD6333 Approved
0.6053 Remote Similarity NPD7625 Phase 1
0.6042 Remote Similarity NPD8338 Approved
0.6034 Remote Similarity NPD3667 Approved
0.6029 Remote Similarity NPD7641 Discontinued
0.6016 Remote Similarity NPD5282 Discontinued
0.6 Remote Similarity NPD7525 Registered

  Bioactivity similarity: Similar Natural Products in NPASS

Bioactivity similarity was calculated based on bioactivity descriptors of compounds. The bioactivity descriptors were calculated by a recently developed AI algorithm Chemical Checker (CC) [Nature Biotechnology, 38:1087–1096, 2020; Nature Communications, 12:3932, 2021], which evaluated bioactivity similarities at five levels:
A: chemistry similarity;
B: biological targets similarity;
C: networks similarity;
D: cell-based bioactivity similarity;
E: similarity based on clinical data.

Those 5 categories of CC bioactivity descriptors were calculated and then subjected to manifold projection using UMAP algorithm, to project all NPs on a 2-Dimensional space. The current NP was highlighted with a small circle in the 2-D map. Below figures: left-to-right, A-to-E.

A: chemistry similarity
B: biological targets similarity
C: networks similarity
D: cell-based bioactivity similarity
E: similarity based on clinical data