Structure

Physi-Chem Properties

Molecular Weight:  374.1
Volume:  360.741
LogP:  2.884
LogD:  2.517
LogS:  -4.042
# Rotatable Bonds:  5
TPSA:  107.59
# H-Bond Aceptor:  8
# H-Bond Donor:  2
# Rings:  3
# Heavy Atoms:  8

MedChem Properties

QED Drug-Likeness Score:  0.702
Synthetic Accessibility Score:  2.582
Fsp3:  0.211
Lipinski Rule-of-5:  Accepted
Pfizer Rule:  Accepted
GSK Rule:  Accepted
BMS Rule:  0
Golden Triangle Rule:  Accepted
Chelating Alert:  1
PAINS Alert:  0

ADMET Properties (ADMETlab2.0)

ADMET: Absorption

Caco-2 Permeability:  -4.902
MDCK Permeability:  3.074087362620048e-05
Pgp-inhibitor:  0.975
Pgp-substrate:  0.002
Human Intestinal Absorption (HIA):  0.036
20% Bioavailability (F20%):  0.006
30% Bioavailability (F30%):  0.013

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB):  0.007
Plasma Protein Binding (PPB):  79.26710510253906%
Volume Distribution (VD):  0.816
Pgp-substrate:  27.0903263092041%

ADMET: Metabolism

CYP1A2-inhibitor:  0.571
CYP1A2-substrate:  0.978
CYP2C19-inhibitor:  0.111
CYP2C19-substrate:  0.559
CYP2C9-inhibitor:  0.48
CYP2C9-substrate:  0.791
CYP2D6-inhibitor:  0.037
CYP2D6-substrate:  0.809
CYP3A4-inhibitor:  0.491
CYP3A4-substrate:  0.384

ADMET: Excretion

Clearance (CL):  5.072
Half-life (T1/2):  0.768

ADMET: Toxicity

hERG Blockers:  0.119
Human Hepatotoxicity (H-HT):  0.172
Drug-inuced Liver Injury (DILI):  0.945
AMES Toxicity:  0.216
Rat Oral Acute Toxicity:  0.233
Maximum Recommended Daily Dose:  0.225
Skin Sensitization:  0.738
Carcinogencity:  0.032
Eye Corrosion:  0.003
Eye Irritation:  0.162
Respiratory Toxicity:  0.441

Download Data

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General Info & Identifiers & Properties  
Structure MOL file  
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Biological Activities  
Similar NPs/Drugs  

  Natural Product: NPC208193

Natural Product ID:  NPC208193
Common Name*:   Deslanoside
IUPAC Name:   3-[(3S,5R,8R,9S,10S,12R,13S,14S,17R)-12,14-dihydroxy-3-[(2R,4S,5S,6R)-4-hydroxy-5-[(2S,4S,5S,6R)-4-hydroxy-5-[(2S,4S,5S,6R)-4-hydroxy-6-methyl-5-[(2S,3R,4S,5S,6R)-3,4,5-trihydroxy-6-(hydroxymethyl)oxan-2-yl]oxyoxan-2-yl]oxy-6-methyloxan-2-yl]oxy-6-methyloxan-2-yl]oxy-10,13-dimethyl-1,2,3,4,5,6,7,8,9,11,12,15,16,17-tetradecahydrocyclopenta[a]phenanthren-17-yl]-2H-furan-5-one
Synonyms:   Cedilanid-D; Desacetyl-Lanatoside C; Deslanoside
Standard InCHIKey:  OBATZBGFDSVCJD-LALPQLPRSA-N
Standard InCHI:  InChI=1S/C47H74O19/c1-20-41(64-36-16-30(50)42(21(2)60-36)65-37-17-31(51)43(22(3)61-37)66-44-40(56)39(55)38(54)32(18-48)63-44)29(49)15-35(59-20)62-25-8-10-45(4)24(13-25)6-7-27-28(45)14-33(52)46(5)26(9-11-47(27,46)57)23-12-34(53)58-19-23/h12,20-22,24-33,35-44,48-52,54-57H,6-11,13-19H2,1-5H3/t20-,21-,22-,24-,25+,26-,27-,28+,29+,30+,31+,32-,33-,35+,36+,37+,38-,39+,40-,41-,42-,43-,44+,45+,46+,47+/m1/s1
SMILES:  OC[C@H]1O[C@@H](O[C@H]2[C@@H](O)C[C@@H](O[C@@H]2C)O[C@H]2[C@@H](O)C[C@@H](O[C@@H]2C)O[C@H]2[C@@H](O)C[C@@H](O[C@@H]2C)O[C@H]2CC[C@]3([C@@H](C2)CC[C@@H]2[C@@H]3C[C@@H](O)[C@]3([C@]2(O)CC[C@@H]3C2=CC(=O)OC2)C)C)[C@@H]([C@H]([C@@H]1O)O)O
Synthetic Gene Cluster:   n.a.
ChEMBL Identifier:   CHEMBL1614
PubChem CID:   28620
Chemical Classification**:  
  • CHEMONTID:0000000 [Organic compounds]
    • [CHEMONTID:0000012] Lipids and lipid-like molecules
      • [CHEMONTID:0000258] Steroids and steroid derivatives
        • [CHEMONTID:0001125] Steroid lactones
          • [CHEMONTID:0001555] Cardenolides and derivatives
            • [CHEMONTID:0001559] Cardenolide glycosides and derivatives

*Note: the InCHIKey will be temporarily assigned as the "Common Name" if no IUPAC name or alternative short name is available.
**Note: the Chemical Classification was calculated by NPClassifier Version 1.5. Reference: PMID:34662515.

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO17774 Hemerocallis fulva Species Xanthorrhoeaceae Eukaryota Flowers n.a. n.a. DOI[10.1016/j.lwt.2014.11.023]
NPO4443 Digitalis purpurea Species Plantaginaceae Eukaryota n.a. n.a. n.a. PMID[9834166]
NPO1551 Luffa aegyptiaca Species Cucurbitaceae Eukaryota Fruit n.a. n.a. Database[FooDB]
NPO1551 Luffa aegyptiaca Species Cucurbitaceae Eukaryota Leaf n.a. n.a. Database[FooDB]
NPO1551 Luffa aegyptiaca Species Cucurbitaceae Eukaryota Seed n.a. n.a. Database[FooDB]
NPO1551 Luffa aegyptiaca Species Cucurbitaceae Eukaryota n.a. n.a. Database[FooDB]
NPO19015 Begonia glabra Species Begoniaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO13401 Phoenix canariensis Species Arecaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO22245 Digitalis lanata Species Plantaginaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO4443 Digitalis purpurea Species Plantaginaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO17774 Hemerocallis fulva Species Xanthorrhoeaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO13401 Phoenix canariensis Species Arecaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO19015 Begonia glabra Species Begoniaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO22245 Digitalis lanata Species Plantaginaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO1551 Luffa aegyptiaca Species Cucurbitaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO4443 Digitalis purpurea Species Plantaginaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO17774 Hemerocallis fulva Species Xanthorrhoeaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO22245 Digitalis lanata Species Plantaginaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO4443 Digitalis purpurea Species Plantaginaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO19015 Begonia glabra Species Begoniaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO17774 Hemerocallis fulva Species Xanthorrhoeaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO1551 Luffa aegyptiaca Species Cucurbitaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO17774 Hemerocallis fulva Species Xanthorrhoeaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO18930 Rubus coreanus Species Rosaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO22245 Digitalis lanata Species Plantaginaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO4443 Digitalis purpurea Species Plantaginaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO4443 Digitalis purpurea Species Plantaginaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19015 Begonia glabra Species Begoniaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO13401 Phoenix canariensis Species Arecaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18930 Rubus coreanus Species Rosaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO12474 Cordyline fruticosa Species Asparagaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO1551 Luffa aegyptiaca Species Cucurbitaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19441 Strychnos splendens Species Loganiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO17774 Hemerocallis fulva Species Xanthorrhoeaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO17635 Aria arguta Species Rosaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19175 Iguana iguana Species Iguanidae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO22245 Digitalis lanata Species Plantaginaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO18180 Erysimum repandum Species Brassicaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO19093 Streptomyces aburaviensis Species Streptomycetaceae Bacteria n.a. n.a. n.a. Database[UNPD]
NPO27168 Atropa belladona Species Solanaceae Eukaryota n.a. n.a. n.a. Database[UNPD]

☑ Note for Reference:
In addition to directly collecting NP source organism data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated them from below databases:
UNPD: Universal Natural Products Database [PMID: 23638153].
StreptomeDB: a database of streptomycetes natural products [PMID: 33051671].
TM-MC: a database of medicinal materials and chemical compounds in Northeast Asian traditional medicine [PMID: 26156871].
TCM@Taiwan: a Traditional Chinese Medicine database [PMID: 21253603].
TCMID: a Traditional Chinese Medicine database [PMID: 29106634].
TCMSP: The traditional Chinese medicine systems pharmacology database and analysis platform [PMID: 24735618].
HerDing: a herb recommendation system to treat diseases using genes and chemicals [PMID: 26980517].
MetaboLights: a metabolomics database [PMID: 27010336].
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  NP Quantity Composition/Concentration

Organism ID NP ID Organism Material Preparation Organism Part NP Quantity (Standard) NP Quantity (Minimum) NP Quantity (Maximum) Quantity Unit Reference

☑ Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP quantitative records for specific NP domains (e.g., NPS from foods or herbs) from domain-specific databases. These databases include:
DUKE: Dr. Duke's Phytochemical and Ethnobotanical Databases.
PHENOL EXPLORER: is the first comprehensive database on polyphenol content in foods [PMID: 24103452], its homepage can be accessed at here.
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT51 Individual Protein Microtubule-associated protein tau Homo sapiens Potency = 79.4 nM PMID[570476]
NPT10 Individual Protein Geminin Homo sapiens Potency n.a. 421.7 nM PMID[570476]
NPT50 Individual Protein Tyrosyl-DNA phosphodiesterase 1 Homo sapiens Potency n.a. 944.1 nM PMID[570477]
NPT50 Individual Protein Tyrosyl-DNA phosphodiesterase 1 Homo sapiens Potency n.a. 1333.6 nM PMID[570477]
NPT153 Individual Protein Androgen Receptor Homo sapiens Potency n.a. 1198.6 nM PubChem BioAssay data set
NPT153 Individual Protein Androgen Receptor Homo sapiens Potency n.a. 11883.2 nM PubChem BioAssay data set
NPT152 Individual Protein Nuclear factor erythroid 2-related factor 2 Homo sapiens Potency n.a. 3757.5 nM PubChem BioAssay data set
NPT106 Individual Protein Peroxisome proliferator-activated receptor delta Homo sapiens Potency n.a. 94.4 nM PubChem BioAssay data set
NPT153 Individual Protein Androgen Receptor Homo sapiens Potency n.a. 668.2 nM PubChem BioAssay data set
NPT106 Individual Protein Peroxisome proliferator-activated receptor delta Homo sapiens Potency n.a. 2113 nM PubChem BioAssay data set
NPT163 Individual Protein Nuclear factor NF-kappa-B p105 subunit Homo sapiens Potency n.a. 213.1 nM PubChem BioAssay data set
NPT2 Others Unspecified Ratio IC50 = 1.8 n.a. PMID[570475]
NPT791 Individual Protein Cruzipain Trypanosoma cruzi Potency = 14125.4 nM PMID[570476]
NPT6 Organism Plasmodium falciparum Plasmodium falciparum Potency n.a. 9285.0 nM PMID[570476]
NPT2 Others Unspecified Potency n.a. 354.8 nM PMID[570477]
NPT2 Others Unspecified Potency n.a. 281.8 nM PMID[570477]
NPT2 Others Unspecified Ac50 n.a. 15.34 uM PMID[570478]
NPT2 Others Unspecified AC50 n.a. 8912.5 nM PMID[570478]
NPT2 Others Unspecified IC50 = 298.68 nM PMID[570478]
NPT2 Others Unspecified Ac50 n.a. 1.585 uM PMID[570478]
NPT2 Others Unspecified Ac50 n.a. 0.4852 uM PMID[570478]
NPT2 Others Unspecified Ac50 n.a. 8.913 uM PMID[570478]
NPT2 Others Unspecified IC50 = 61.4 nM PMID[570478]
NPT2 Others Unspecified Ac50 n.a. 0.8913 uM PMID[570478]
NPT2 Others Unspecified AC50 n.a. 1584.9 nM PMID[570478]
NPT2 Others Unspecified AC50 n.a. 891.3 nM PMID[570478]
NPT20632 ORGANISM Chikungunya virus Chikungunya virus Inhibition = 38.66 % PMID[570479]
NPT20555 ORGANISM SARS-CoV-2 Severe acute respiratory syndrome coronavirus 2 Inhibition = 44.37 % PMID[570480]
NPT20556 SINGLE PROTEIN Replicase polyprotein 1ab Severe acute respiratory syndrome coronavirus 2 Inhibition = 24.93 % PMID[570481]
NPT20555 ORGANISM SARS-CoV-2 Severe acute respiratory syndrome coronavirus 2 Inhibition = -0.31 % PMID[570482]
NPT2 Others Unspecified Potency n.a. 337.8 nM PubChem BioAssay data set
NPT2 Others Unspecified Potency n.a. 298.5 nM PubChem BioAssay data set
NPT2 Others Unspecified Potency n.a. 1059.1 nM PubChem BioAssay data set
NPT2 Others Unspecified Potency n.a. 1344.8 nM PubChem BioAssay data set
NPT2 Others Unspecified Potency n.a. 2660.1 nM PubChem BioAssay data set
NPT2 Others Unspecified Potency n.a. 1678.5 nM PubChem BioAssay data set
NPT2 Others Unspecified Potency n.a. 149.6 nM PubChem BioAssay data set
NPT2 Others Unspecified Potency n.a. 2984.7 nM PubChem BioAssay data set
NPT2 Others Unspecified Potency n.a. 2984.9 nM PubChem BioAssay data set
NPT2 Others Unspecified Potency n.a. 75 nM PubChem BioAssay data set
NPT2 Others Unspecified Potency n.a. 848.5 nM PubChem BioAssay data set
NPT2 Others Unspecified Potency n.a. 530.8 nM PubChem BioAssay data set
NPT2 Others Unspecified Potency n.a. 421.6 nM PubChem BioAssay data set
NPT2 Others Unspecified Potency n.a. 268.3 nM PubChem BioAssay data set
NPT2 Others Unspecified Potency n.a. 2131.4 nM PubChem BioAssay data set
NPT2 Others Unspecified Potency n.a. 1333.3 nM PubChem BioAssay data set
NPT2 Others Unspecified Potency n.a. 11882.3 nM PubChem BioAssay data set
NPT2 Others Unspecified Potency n.a. 2683.2 nM PubChem BioAssay data set
NPT2 Others Unspecified Potency n.a. 1495.9 nM PubChem BioAssay data set
NPT2 Others Unspecified Potency n.a. 1496 nM PubChem BioAssay data set
NPT2 Others Unspecified Potency n.a. 167.9 nM PubChem BioAssay data set
NPT2 Others Unspecified Potency n.a. 1059 nM PubChem BioAssay data set
NPT2 Others Unspecified Potency n.a. 7497.8 nM PubChem BioAssay data set
NPT2 Others Unspecified Potency n.a. 535.4 nM PubChem BioAssay data set
NPT2 Others Unspecified Potency n.a. 379 nM PubChem BioAssay data set
NPT2 Others Unspecified Potency n.a. 190 nM PubChem BioAssay data set
NPT2 Others Unspecified Potency n.a. 95.2 nM PubChem BioAssay data set
NPT2 Others Unspecified Potency n.a. 301.1 nM PubChem BioAssay data set

☑ Note for Activity Records:
☉ The quantitative biological activities were primarily integrated from ChEMBL (Version-30) database and were also directly collected from PubMed literature. PubMed PMID was provided as the reference link for each activity record.

  Chemically structural similarity: I. Similar Active Natural Products in NPASS

Top-200 similar NPs were calculated against the active-NP-set (includes 4,3285 NPs with experimentally-derived bioactivity available in NPASS)

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC208193 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
1.0 High Similarity NPC308262
1.0 High Similarity NPC117445
0.9912 High Similarity NPC474423
0.9912 High Similarity NPC74259
0.9823 High Similarity NPC474908
0.9823 High Similarity NPC475590
0.9823 High Similarity NPC173555
0.9823 High Similarity NPC120390
0.9823 High Similarity NPC475419
0.9823 High Similarity NPC314535
0.9737 High Similarity NPC264336
0.9735 High Similarity NPC72260
0.9735 High Similarity NPC475629
0.9735 High Similarity NPC475556
0.9646 High Similarity NPC469756
0.9646 High Similarity NPC32177
0.9646 High Similarity NPC236973
0.9646 High Similarity NPC55532
0.9646 High Similarity NPC470897
0.9646 High Similarity NPC30483
0.9646 High Similarity NPC292467
0.9565 High Similarity NPC193893
0.9561 High Similarity NPC474466
0.9561 High Similarity NPC475136
0.9478 High Similarity NPC40749
0.9478 High Similarity NPC231518
0.9478 High Similarity NPC475219
0.9474 High Similarity NPC329905
0.9469 High Similarity NPC34390
0.9469 High Similarity NPC27507
0.9469 High Similarity NPC142066
0.9469 High Similarity NPC471353
0.9469 High Similarity NPC93883
0.9469 High Similarity NPC99728
0.9469 High Similarity NPC309034
0.9469 High Similarity NPC50305
0.9469 High Similarity NPC157376
0.9469 High Similarity NPC471354
0.9469 High Similarity NPC244402
0.9469 High Similarity NPC473852
0.9469 High Similarity NPC84987
0.9469 High Similarity NPC243196
0.9469 High Similarity NPC471351
0.9469 High Similarity NPC474418
0.9469 High Similarity NPC471355
0.9469 High Similarity NPC158344
0.9469 High Similarity NPC196429
0.9469 High Similarity NPC87250
0.9469 High Similarity NPC77319
0.9391 High Similarity NPC135369
0.9386 High Similarity NPC83287
0.9381 High Similarity NPC193382
0.9381 High Similarity NPC199428
0.9381 High Similarity NPC5311
0.9381 High Similarity NPC99620
0.9381 High Similarity NPC310341
0.9304 High Similarity NPC44899
0.9304 High Similarity NPC5883
0.9304 High Similarity NPC304260
0.9304 High Similarity NPC29639
0.9298 High Similarity NPC152615
0.9292 High Similarity NPC31354
0.9292 High Similarity NPC84949
0.9292 High Similarity NPC471633
0.9292 High Similarity NPC69576
0.9224 High Similarity NPC107607
0.9217 High Similarity NPC218093
0.9138 High Similarity NPC195560
0.9138 High Similarity NPC229962
0.9138 High Similarity NPC81222
0.9138 High Similarity NPC291820
0.913 High Similarity NPC203862
0.913 High Similarity NPC290693
0.913 High Similarity NPC20979
0.9113 High Similarity NPC329675
0.9083 High Similarity NPC329784
0.9083 High Similarity NPC240070
0.9068 High Similarity NPC43842
0.906 High Similarity NPC207243
0.906 High Similarity NPC198325
0.906 High Similarity NPC233391
0.906 High Similarity NPC50689
0.9052 High Similarity NPC10366
0.9032 High Similarity NPC194716
0.8992 High Similarity NPC257207
0.8992 High Similarity NPC295133
0.8992 High Similarity NPC202261
0.8992 High Similarity NPC106589
0.8974 High Similarity NPC476085
0.8974 High Similarity NPC473633
0.8966 High Similarity NPC476690
0.8966 High Similarity NPC100048
0.8952 High Similarity NPC329636
0.8934 High Similarity NPC276838
0.8934 High Similarity NPC232785
0.8934 High Similarity NPC188234
0.8934 High Similarity NPC140092
0.8934 High Similarity NPC329986
0.8934 High Similarity NPC125077
0.8908 High Similarity NPC115349
0.8889 High Similarity NPC475403
0.8889 High Similarity NPC475357
0.8889 High Similarity NPC160888
0.8879 High Similarity NPC63609
0.8879 High Similarity NPC146652
0.8871 High Similarity NPC469749
0.8871 High Similarity NPC477709
0.8871 High Similarity NPC476221
0.8871 High Similarity NPC116075
0.8871 High Similarity NPC146857
0.8871 High Similarity NPC32793
0.8871 High Similarity NPC247190
0.886 High Similarity NPC65167
0.885 High Similarity NPC475030
0.8843 High Similarity NPC179261
0.8833 High Similarity NPC27363
0.881 High Similarity NPC59288
0.8803 High Similarity NPC477807
0.8793 High Similarity NPC11548
0.879 High Similarity NPC93416
0.877 High Similarity NPC471356
0.877 High Similarity NPC146456
0.877 High Similarity NPC471357
0.877 High Similarity NPC469757
0.877 High Similarity NPC117702
0.877 High Similarity NPC179412
0.8761 High Similarity NPC472988
0.8761 High Similarity NPC38217
0.8739 High Similarity NPC475358
0.8739 High Similarity NPC473566
0.8739 High Similarity NPC470312
0.8729 High Similarity NPC470515
0.8718 High Similarity NPC148965
0.8718 High Similarity NPC207637
0.8718 High Similarity NPC477031
0.8718 High Similarity NPC477029
0.8718 High Similarity NPC477030
0.871 High Similarity NPC16569
0.871 High Similarity NPC253456
0.871 High Similarity NPC159338
0.8707 High Similarity NPC469347
0.8707 High Similarity NPC469348
0.8696 High Similarity NPC114188
0.8689 High Similarity NPC469750
0.8689 High Similarity NPC250556
0.8684 High Similarity NPC296761
0.8684 High Similarity NPC43976
0.8684 High Similarity NPC51925
0.8684 High Similarity NPC125361
0.8684 High Similarity NPC154085
0.8673 High Similarity NPC14946
0.8673 High Similarity NPC208650
0.8673 High Similarity NPC234160
0.8673 High Similarity NPC63368
0.8655 High Similarity NPC268326
0.8655 High Similarity NPC470517
0.8655 High Similarity NPC470911
0.8655 High Similarity NPC153085
0.8655 High Similarity NPC470915
0.864 High Similarity NPC42670
0.864 High Similarity NPC19124
0.8632 High Similarity NPC477808
0.8629 High Similarity NPC70542
0.8629 High Similarity NPC17896
0.8629 High Similarity NPC6108
0.8629 High Similarity NPC9499
0.8629 High Similarity NPC91
0.8629 High Similarity NPC86159
0.8629 High Similarity NPC284406
0.8629 High Similarity NPC469755
0.8629 High Similarity NPC89514
0.8629 High Similarity NPC469753
0.8629 High Similarity NPC471360
0.8629 High Similarity NPC10823
0.8629 High Similarity NPC251866
0.8629 High Similarity NPC180079
0.8629 High Similarity NPC471359
0.8629 High Similarity NPC471358
0.8629 High Similarity NPC197707
0.8629 High Similarity NPC469754
0.8629 High Similarity NPC471352
0.8629 High Similarity NPC471361
0.8629 High Similarity NPC469752
0.8629 High Similarity NPC469751
0.8629 High Similarity NPC219085
0.8621 High Similarity NPC42171
0.8621 High Similarity NPC112274
0.8607 High Similarity NPC471090
0.8596 High Similarity NPC51172
0.8596 High Similarity NPC220427
0.8596 High Similarity NPC246124
0.8596 High Similarity NPC49032
0.8596 High Similarity NPC180183
0.8596 High Similarity NPC125324
0.8596 High Similarity NPC159005
0.8596 High Similarity NPC6931
0.8584 High Similarity NPC208594
0.8584 High Similarity NPC152584
0.8584 High Similarity NPC69737
0.8584 High Similarity NPC473199

  Chemically structural similarity: II. Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC208193 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.9823 High Similarity NPD8380 Approved
0.9823 High Similarity NPD8296 Approved
0.9823 High Similarity NPD8335 Approved
0.9823 High Similarity NPD8378 Approved
0.9823 High Similarity NPD8379 Approved
0.9735 High Similarity NPD8294 Approved
0.9735 High Similarity NPD8377 Approved
0.9478 High Similarity NPD8033 Approved
0.9386 High Similarity NPD7328 Approved
0.9386 High Similarity NPD7327 Approved
0.9304 High Similarity NPD7516 Approved
0.8689 High Similarity NPD7507 Approved
0.8629 High Similarity NPD7319 Approved
0.8512 High Similarity NPD7503 Approved
0.839 Intermediate Similarity NPD8133 Approved
0.7815 Intermediate Similarity NPD6686 Approved
0.7643 Intermediate Similarity NPD7625 Phase 1
0.7586 Intermediate Similarity NPD7638 Approved
0.7583 Intermediate Similarity NPD6412 Phase 2
0.7557 Intermediate Similarity NPD7736 Approved
0.7521 Intermediate Similarity NPD7640 Approved
0.7521 Intermediate Similarity NPD7639 Approved
0.7519 Intermediate Similarity NPD8328 Phase 3
0.7456 Intermediate Similarity NPD8171 Discontinued
0.7348 Intermediate Similarity NPD8293 Discontinued
0.7231 Intermediate Similarity NPD8515 Approved
0.7231 Intermediate Similarity NPD8516 Approved
0.7231 Intermediate Similarity NPD8517 Approved
0.7177 Intermediate Similarity NPD8132 Clinical (unspecified phase)
0.7176 Intermediate Similarity NPD6370 Approved
0.7131 Intermediate Similarity NPD8170 Clinical (unspecified phase)
0.7099 Intermediate Similarity NPD8513 Phase 3
0.7068 Intermediate Similarity NPD7492 Approved
0.7054 Intermediate Similarity NPD8295 Clinical (unspecified phase)
0.704 Intermediate Similarity NPD4061 Clinical (unspecified phase)
0.7029 Intermediate Similarity NPD8450 Suspended
0.7023 Intermediate Similarity NPD6054 Approved
0.7023 Intermediate Similarity NPD6059 Approved
0.7015 Intermediate Similarity NPD6616 Approved
0.7008 Intermediate Similarity NPD6882 Approved
0.7008 Intermediate Similarity NPD8297 Approved
0.6967 Remote Similarity NPD7632 Discontinued
0.6963 Remote Similarity NPD7078 Approved
0.6957 Remote Similarity NPD8449 Approved
0.6929 Remote Similarity NPD8413 Clinical (unspecified phase)
0.6923 Remote Similarity NPD7115 Discovery
0.6923 Remote Similarity NPD6009 Approved
0.6894 Remote Similarity NPD6319 Approved
0.685 Remote Similarity NPD5955 Clinical (unspecified phase)
0.6842 Remote Similarity NPD6016 Approved
0.6842 Remote Similarity NPD6015 Approved
0.6825 Remote Similarity NPD7320 Approved
0.6822 Remote Similarity NPD4632 Approved
0.68 Remote Similarity NPD5739 Approved
0.68 Remote Similarity NPD7128 Approved
0.68 Remote Similarity NPD6402 Approved
0.68 Remote Similarity NPD6675 Approved
0.6791 Remote Similarity NPD5988 Approved
0.6772 Remote Similarity NPD6372 Approved
0.6772 Remote Similarity NPD6373 Approved
0.6748 Remote Similarity NPD5344 Discontinued
0.6741 Remote Similarity NPD6067 Discontinued
0.6721 Remote Similarity NPD4225 Approved
0.6693 Remote Similarity NPD6899 Approved
0.6693 Remote Similarity NPD6881 Approved
0.6667 Remote Similarity NPD8130 Phase 1
0.6667 Remote Similarity NPD6649 Approved
0.6667 Remote Similarity NPD6650 Approved
0.6615 Remote Similarity NPD6053 Discontinued
0.6614 Remote Similarity NPD5697 Approved
0.6614 Remote Similarity NPD5701 Approved
0.6614 Remote Similarity NPD5954 Clinical (unspecified phase)
0.661 Remote Similarity NPD6051 Approved
0.6589 Remote Similarity NPD7290 Approved
0.6589 Remote Similarity NPD6883 Approved
0.6589 Remote Similarity NPD7102 Approved
0.6585 Remote Similarity NPD8029 Clinical (unspecified phase)
0.6549 Remote Similarity NPD7525 Registered
0.6547 Remote Similarity NPD6033 Approved
0.6538 Remote Similarity NPD6617 Approved
0.6538 Remote Similarity NPD6847 Approved
0.6538 Remote Similarity NPD6869 Approved
0.6535 Remote Similarity NPD6008 Approved
0.6529 Remote Similarity NPD7748 Approved
0.6512 Remote Similarity NPD6014 Approved
0.6512 Remote Similarity NPD6013 Approved
0.6512 Remote Similarity NPD6012 Approved
0.6504 Remote Similarity NPD6084 Phase 2
0.6504 Remote Similarity NPD6083 Phase 2
0.6504 Remote Similarity NPD7902 Approved
0.6496 Remote Similarity NPD7604 Phase 2
0.6471 Remote Similarity NPD5983 Phase 2
0.6441 Remote Similarity NPD7524 Approved
0.6434 Remote Similarity NPD6011 Approved
0.6434 Remote Similarity NPD5345 Clinical (unspecified phase)
0.6412 Remote Similarity NPD6401 Clinical (unspecified phase)
0.6404 Remote Similarity NPD6928 Phase 2
0.6403 Remote Similarity NPD6336 Discontinued
0.64 Remote Similarity NPD6648 Approved
0.6371 Remote Similarity NPD4755 Approved
0.6364 Remote Similarity NPD8034 Phase 2
0.6364 Remote Similarity NPD7515 Phase 2
0.6364 Remote Similarity NPD8035 Phase 2
0.6357 Remote Similarity NPD7899 Clinical (unspecified phase)
0.6336 Remote Similarity NPD4634 Approved
0.6325 Remote Similarity NPD7338 Clinical (unspecified phase)
0.6325 Remote Similarity NPD6400 Clinical (unspecified phase)
0.6311 Remote Similarity NPD4202 Approved
0.6299 Remote Similarity NPD5211 Phase 2
0.6281 Remote Similarity NPD46 Approved
0.6281 Remote Similarity NPD6698 Approved
0.6281 Remote Similarity NPD7838 Discovery
0.627 Remote Similarity NPD4700 Approved
0.627 Remote Similarity NPD5285 Approved
0.627 Remote Similarity NPD4696 Approved
0.627 Remote Similarity NPD5286 Approved
0.6265 Remote Similarity NPD7799 Discontinued
0.626 Remote Similarity NPD7900 Approved
0.626 Remote Similarity NPD7901 Clinical (unspecified phase)
0.625 Remote Similarity NPD7513 Clinical (unspecified phase)
0.6241 Remote Similarity NPD8074 Phase 3
0.6239 Remote Similarity NPD6695 Phase 3
0.623 Remote Similarity NPD7637 Suspended
0.6222 Remote Similarity NPD6274 Approved
0.622 Remote Similarity NPD4159 Approved
0.6212 Remote Similarity NPD6371 Approved
0.621 Remote Similarity NPD6356 Clinical (unspecified phase)
0.621 Remote Similarity NPD5695 Phase 3
0.6204 Remote Similarity NPD7101 Approved
0.6204 Remote Similarity NPD7100 Approved
0.6202 Remote Similarity NPD5141 Approved
0.619 Remote Similarity NPD5696 Approved
0.6179 Remote Similarity NPD6399 Phase 3
0.6174 Remote Similarity NPD7645 Phase 2
0.6172 Remote Similarity NPD4633 Approved
0.6172 Remote Similarity NPD5225 Approved
0.6172 Remote Similarity NPD5224 Approved
0.6172 Remote Similarity NPD5226 Approved
0.6167 Remote Similarity NPD4751 Clinical (unspecified phase)
0.6167 Remote Similarity NPD7750 Discontinued
0.6154 Remote Similarity NPD4767 Approved
0.6154 Remote Similarity NPD4768 Approved
0.6134 Remote Similarity NPD7520 Clinical (unspecified phase)
0.6131 Remote Similarity NPD6335 Approved
0.6124 Remote Similarity NPD5175 Approved
0.6124 Remote Similarity NPD5174 Approved
0.6116 Remote Similarity NPD6903 Approved
0.6115 Remote Similarity NPD6909 Approved
0.6115 Remote Similarity NPD6908 Approved
0.6111 Remote Similarity NPD5956 Approved
0.6098 Remote Similarity NPD5693 Phase 1
0.6094 Remote Similarity NPD5223 Approved
0.6084 Remote Similarity NPD8337 Approved
0.6084 Remote Similarity NPD8336 Approved
0.6083 Remote Similarity NPD7521 Approved
0.6083 Remote Similarity NPD6684 Approved
0.6083 Remote Similarity NPD7334 Approved
0.6083 Remote Similarity NPD6409 Approved
0.6083 Remote Similarity NPD5330 Approved
0.6083 Remote Similarity NPD7146 Approved
0.6066 Remote Similarity NPD4753 Phase 2
0.6066 Remote Similarity NPD5328 Approved
0.6061 Remote Similarity NPD4730 Approved
0.6061 Remote Similarity NPD4729 Approved
0.6058 Remote Similarity NPD6317 Approved
0.6027 Remote Similarity NPD8338 Approved
0.6014 Remote Similarity NPD6313 Approved
0.6014 Remote Similarity NPD6314 Approved
0.6 Remote Similarity NPD6082 Clinical (unspecified phase)
0.6 Remote Similarity NPD4754 Approved
0.6 Remote Similarity NPD6291 Clinical (unspecified phase)
0.6 Remote Similarity NPD6921 Approved
0.5983 Remote Similarity NPD6930 Phase 2
0.5983 Remote Similarity NPD6931 Approved
0.597 Remote Similarity NPD5250 Approved
0.597 Remote Similarity NPD5247 Approved
0.597 Remote Similarity NPD5248 Approved
0.597 Remote Similarity NPD5251 Approved
0.597 Remote Similarity NPD5249 Phase 3
0.5968 Remote Similarity NPD6079 Approved
0.595 Remote Similarity NPD3618 Phase 1
0.594 Remote Similarity NPD5128 Approved
0.5935 Remote Similarity NPD6080 Approved
0.5935 Remote Similarity NPD6904 Approved
0.5935 Remote Similarity NPD6673 Approved
0.5917 Remote Similarity NPD3665 Phase 1
0.5917 Remote Similarity NPD3133 Approved
0.5917 Remote Similarity NPD3666 Approved
0.5913 Remote Similarity NPD3701 Clinical (unspecified phase)
0.5897 Remote Similarity NPD4195 Approved
0.5897 Remote Similarity NPD6929 Approved
0.5882 Remote Similarity NPD4752 Clinical (unspecified phase)
0.5873 Remote Similarity NPD6001 Approved
0.587 Remote Similarity NPD6940 Discontinued
0.5854 Remote Similarity NPD6672 Approved
0.5854 Remote Similarity NPD5737 Approved
0.585 Remote Similarity NPD7260 Phase 2
0.5847 Remote Similarity NPD7514 Phase 3
0.584 Remote Similarity NPD7087 Discontinued
0.584 Remote Similarity NPD5281 Approved

  Bioactivity similarity: Similar Natural Products in NPASS

Bioactivity similarity was calculated based on bioactivity descriptors of compounds. The bioactivity descriptors were calculated by a recently developed AI algorithm Chemical Checker (CC) [Nature Biotechnology, 38:1087–1096, 2020; Nature Communications, 12:3932, 2021], which evaluated bioactivity similarities at five levels:
A: chemistry similarity;
B: biological targets similarity;
C: networks similarity;
D: cell-based bioactivity similarity;
E: similarity based on clinical data.

Those 5 categories of CC bioactivity descriptors were calculated and then subjected to manifold projection using UMAP algorithm, to project all NPs on a 2-Dimensional space. The current NP was highlighted with a small circle in the 2-D map. Below figures: left-to-right, A-to-E.

A: chemistry similarity
B: biological targets similarity
C: networks similarity
D: cell-based bioactivity similarity
E: similarity based on clinical data