Structure

Physi-Chem Properties

Molecular Weight:  394.14
Volume:  395.232
LogP:  4.573
LogD:  4.055
LogS:  -4.59
# Rotatable Bonds:  2
TPSA:  63.22
# H-Bond Aceptor:  6
# H-Bond Donor:  0
# Rings:  5
# Heavy Atoms:  6

MedChem Properties

QED Drug-Likeness Score:  0.767
Synthetic Accessibility Score:  3.698
Fsp3:  0.348
Lipinski Rule-of-5:  Accepted
Pfizer Rule:  Rejected
GSK Rule:  Rejected
BMS Rule:  0
Golden Triangle Rule:  Accepted
Chelating Alert:  0
PAINS Alert:  0

ADMET Properties (ADMETlab2.0)

ADMET: Absorption

Caco-2 Permeability:  -4.906
MDCK Permeability:  3.221410952392034e-05
Pgp-inhibitor:  0.999
Pgp-substrate:  0.0
Human Intestinal Absorption (HIA):  0.006
20% Bioavailability (F20%):  0.008
30% Bioavailability (F30%):  0.06

ADMET: Distribution

Blood-Brain-Barrier Penetration (BBB):  0.115
Plasma Protein Binding (PPB):  98.26736450195312%
Volume Distribution (VD):  0.74
Pgp-substrate:  5.39614725112915%

ADMET: Metabolism

CYP1A2-inhibitor:  0.297
CYP1A2-substrate:  0.858
CYP2C19-inhibitor:  0.897
CYP2C19-substrate:  0.851
CYP2C9-inhibitor:  0.882
CYP2C9-substrate:  0.902
CYP2D6-inhibitor:  0.937
CYP2D6-substrate:  0.849
CYP3A4-inhibitor:  0.949
CYP3A4-substrate:  0.646

ADMET: Excretion

Clearance (CL):  5.186
Half-life (T1/2):  0.093

ADMET: Toxicity

hERG Blockers:  0.11
Human Hepatotoxicity (H-HT):  0.842
Drug-inuced Liver Injury (DILI):  0.735
AMES Toxicity:  0.222
Rat Oral Acute Toxicity:  0.696
Maximum Recommended Daily Dose:  0.847
Skin Sensitization:  0.167
Carcinogencity:  0.767
Eye Corrosion:  0.003
Eye Irritation:  0.04
Respiratory Toxicity:  0.857

Download Data

Data Type Select
General Info & Identifiers & Properties  
Structure MOL file  
Source Organisms  
Biological Activities  
Similar NPs/Drugs  

  Natural Product: NPC165549

Natural Product ID:  NPC165549
Common Name*:   Deguelin
IUPAC Name:   n.a.
Synonyms:   Deguelin
Standard InCHIKey:  ORDAZKGHSNRHTD-UXHICEINSA-N
Standard InCHI:  InChI=1S/C23H22O6/c1-23(2)8-7-12-15(29-23)6-5-13-21(24)20-14-9-17(25-3)18(26-4)10-16(14)27-11-19(20)28-22(12)13/h5-10,19-20H,11H2,1-4H3/t19-,20+/m1/s1
SMILES:  COc1cc2c(cc1OC)OC[C@@H]1[C@H]2C(=O)c2c(O1)c1C=CC(Oc1cc2)(C)C
Synthetic Gene Cluster:   n.a.
ChEMBL Identifier:   CHEMBL393417
PubChem CID:   107935
Chemical Classification**:  
  • CHEMONTID:0000000 [Organic compounds]
    • [CHEMONTID:0000261] Phenylpropanoids and polyketides
      • [CHEMONTID:0002506] Isoflavonoids
        • [CHEMONTID:0001607] Rotenoids
          • [CHEMONTID:0003528] Rotenones

*Note: the InCHIKey will be temporarily assigned as the "Common Name" if no IUPAC name or alternative short name is available.
**Note: the Chemical Classification was calculated by NPClassifier Version 1.5. Reference: PMID:34662515.

  Species Source

Organism ID Organism Name Taxonomy Level Family SuperKingdom Isolation Part Collection Location Collection Time Reference
NPO32669 derris malaccensis plain Species Fabaceae Eukaryota n.a. n.a. n.a. PMID[11975515]
NPO26058 Erycibe expansa Species Convolvulaceae Eukaryota n.a. stem n.a. PMID[17077549]
NPO26058 Erycibe expansa Species Convolvulaceae Eukaryota stems n.a. n.a. PMID[17158054]
NPO16886 Amorpha fruticosa Species Fabaceae Eukaryota n.a. n.a. n.a. PMID[18841906]
NPO8274 Geijera parviflora Species Rutaceae Eukaryota n.a. n.a. n.a. PMID[23848189]
NPO6485 Spiraea japonica Species Rosaceae Eukaryota n.a. n.a. n.a. PMID[24684844]
NPO4520 Allium macrostemon Species Amaryllidaceae Eukaryota n.a. leaf n.a. PMID[26434122]
NPO16886 Amorpha fruticosa Species Fabaceae Eukaryota Fruits n.a. n.a. PMID[28075580]
NPO16886 Amorpha fruticosa Species Fabaceae Eukaryota n.a. n.a. n.a. PMID[8326318]
NPO16886 Amorpha fruticosa Species Fabaceae Eukaryota n.a. n.a. n.a. PMID[8350086]
NPO6147 Eupatorium riparium Species Asteraceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO26058 Erycibe expansa Species Convolvulaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO4520 Allium macrostemon Species Amaryllidaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO6485 Spiraea japonica Species Rosaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO16886 Amorpha fruticosa Species Fabaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO5753 Glycosmis montana Species Rutaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO3890 Scopolia japonica Species Solanaceae Eukaryota n.a. n.a. n.a. Database[HerDing]
NPO6147 Eupatorium riparium Species Asteraceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO16886 Amorpha fruticosa Species Fabaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO3890 Scopolia japonica Species Solanaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO4520 Allium macrostemon Species Amaryllidaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO1007 Crotalaria paniculata Species Fabaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO6485 Spiraea japonica Species Rosaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO5753 Glycosmis montana Species Rutaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO26058 Erycibe expansa Species Convolvulaceae Eukaryota n.a. n.a. n.a. Database[TCMID]
NPO3890 Scopolia japonica Species Solanaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO16886 Amorpha fruticosa Species Fabaceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO6147 Eupatorium riparium Species Asteraceae Eukaryota n.a. n.a. n.a. Database[TCM_Taiwan]
NPO3890 Scopolia japonica Species Solanaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO4520 Allium macrostemon Species Amaryllidaceae Eukaryota n.a. n.a. n.a. Database[TM-MC]
NPO1007 Crotalaria paniculata Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO5753 Glycosmis montana Species Rutaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO16886 Amorpha fruticosa Species Fabaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO4520 Allium macrostemon Species Amaryllidaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO12750 Cordia americana Species Cordiaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO5368 Achillea cretica Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO15101 Tricholoma panaeolum Species Tricholomataceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO6147 Eupatorium riparium Species Asteraceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO3890 Scopolia japonica Species Solanaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO8274 Geijera parviflora Species Rutaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO6485 Spiraea japonica Species Rosaceae Eukaryota n.a. n.a. n.a. Database[UNPD]
NPO2671 Pedicularis semitorta Species Orobanchaceae Eukaryota n.a. n.a. n.a. Database[UNPD]

☑ Note for Reference:
In addition to directly collecting NP source organism data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated them from below databases:
UNPD: Universal Natural Products Database [PMID: 23638153].
StreptomeDB: a database of streptomycetes natural products [PMID: 33051671].
TM-MC: a database of medicinal materials and chemical compounds in Northeast Asian traditional medicine [PMID: 26156871].
TCM@Taiwan: a Traditional Chinese Medicine database [PMID: 21253603].
TCMID: a Traditional Chinese Medicine database [PMID: 29106634].
TCMSP: The traditional Chinese medicine systems pharmacology database and analysis platform [PMID: 24735618].
HerDing: a herb recommendation system to treat diseases using genes and chemicals [PMID: 26980517].
MetaboLights: a metabolomics database [PMID: 27010336].
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  NP Quantity Composition/Concentration

Organism ID NP ID Organism Material Preparation Organism Part NP Quantity (Standard) NP Quantity (Minimum) NP Quantity (Maximum) Quantity Unit Reference

☑ Note for Reference:
In addition to directly collecting NP quantitative data from primary literature (where reference will provided as NCBI PMID or DOI links), NPASS also integrated NP quantitative records for specific NP domains (e.g., NPS from foods or herbs) from domain-specific databases. These databases include:
DUKE: Dr. Duke's Phytochemical and Ethnobotanical Databases.
PHENOL EXPLORER: is the first comprehensive database on polyphenol content in foods [PMID: 24103452], its homepage can be accessed at here.
FooDB: a database of constituents, chemistry and biology of food species [www.foodb.ca].

  Biological Activity

Target ID Target Type Target Name Target Organism Activity Type Activity Relation Value Unit Reference
NPT466 Cell Line U-937 Homo sapiens IC50 = 42000.0 nM PMID[461097]
NPT466 Cell Line U-937 Homo sapiens IC50 = 16000.0 nM PMID[461097]
NPT466 Cell Line U-937 Homo sapiens IC50 = 5800.0 nM PMID[461097]
NPT453 Cell Line HT-1080 Homo sapiens Inhibition = 50.2 % PMID[461097]
NPT453 Cell Line HT-1080 Homo sapiens Inhibition = 38.0 % PMID[461097]
NPT453 Cell Line HT-1080 Homo sapiens Inhibition = 58.0 % PMID[461097]
NPT453 Cell Line HT-1080 Homo sapiens Inhibition = 57.9 % PMID[461097]
NPT453 Cell Line HT-1080 Homo sapiens Inhibition = 6.3 % PMID[461097]
NPT453 Cell Line HT-1080 Homo sapiens Inhibition = 8.6 % PMID[461097]
NPT453 Cell Line HT-1080 Homo sapiens Inhibition = 10.7 % PMID[461097]
NPT453 Cell Line HT-1080 Homo sapiens Inhibition = 10.9 % PMID[461097]
NPT453 Cell Line HT-1080 Homo sapiens Inhibition = 78.3 % PMID[461097]
NPT453 Cell Line HT-1080 Homo sapiens Inhibition = 96.5 % PMID[461097]
NPT453 Cell Line HT-1080 Homo sapiens Inhibition = 97.7 % PMID[461097]
NPT453 Cell Line HT-1080 Homo sapiens Inhibition = 97.3 % PMID[461097]
NPT453 Cell Line HT-1080 Homo sapiens Inhibition = 98.2 % PMID[461097]
NPT453 Cell Line HT-1080 Homo sapiens Inhibition = 98.7 % PMID[461097]
NPT453 Cell Line HT-1080 Homo sapiens Inhibition = 98.8 % PMID[461097]
NPT453 Cell Line HT-1080 Homo sapiens Inhibition = 98.9 % PMID[461097]
NPT453 Cell Line HT-1080 Homo sapiens Inhibition = 10.5 % PMID[461097]
NPT453 Cell Line HT-1080 Homo sapiens Inhibition = -0.9 % PMID[461097]
NPT453 Cell Line HT-1080 Homo sapiens Inhibition = -1.8 % PMID[461097]
NPT453 Cell Line HT-1080 Homo sapiens Inhibition = 17.0 % PMID[461097]
NPT453 Cell Line HT-1080 Homo sapiens Inhibition = 35.2 % PMID[461097]
NPT453 Cell Line HT-1080 Homo sapiens Inhibition = 44.2 % PMID[461097]
NPT453 Cell Line HT-1080 Homo sapiens Inhibition = 51.0 % PMID[461097]
NPT453 Cell Line HT-1080 Homo sapiens Inhibition = 40.4 % PMID[461097]
NPT453 Cell Line HT-1080 Homo sapiens Inhibition = 95.3 % PMID[461097]
NPT453 Cell Line HT-1080 Homo sapiens Inhibition = 98.5 % PMID[461097]
NPT116 Cell Line HL-60 Homo sapiens Activity = 12.5 % PMID[461097]
NPT116 Cell Line HL-60 Homo sapiens Activity = 22.2 % PMID[461097]
NPT116 Cell Line HL-60 Homo sapiens Activity = 2.1 10^5/ml PMID[461097]
NPT116 Cell Line HL-60 Homo sapiens Activity = 0.3 10^5/ml PMID[461097]
NPT210 Individual Protein Thyroid stimulating hormone receptor Homo sapiens Potency = 19952.6 nM PMID[461100]
NPT51 Individual Protein Microtubule-associated protein tau Homo sapiens Potency = 25118.9 nM PMID[461100]
NPT213 Individual Protein Cytochrome P450 2C19 Homo sapiens Potency = 5011.9 nM PMID[461100]
NPT51 Individual Protein Microtubule-associated protein tau Homo sapiens Potency = 39810.7 nM PMID[461100]
NPT531 Individual Protein Nuclear receptor ROR-gamma Mus musculus Potency = 1122018.5 nM PMID[461100]
NPT53 Individual Protein 4'-phosphopantetheinyl transferase ffp Bacillus subtilis Potency = 70794.6 nM PMID[461100]
NPT150 Individual Protein Anthrax lethal factor Bacillus anthracis Potency = 19952.6 nM PMID[461100]
NPT531 Individual Protein Nuclear receptor ROR-gamma Mus musculus Potency = 562.3 nM PMID[461100]
NPT539 Individual Protein Cellular tumor antigen p53 Homo sapiens Potency = 6309.6 nM PMID[461100]
NPT110 Individual Protein Cytochrome P450 2D6 Homo sapiens Potency = 63.1 nM PMID[461100]
NPT109 Individual Protein Cytochrome P450 3A4 Homo sapiens Potency = 15848.9 nM PMID[461100]
NPT110 Individual Protein Cytochrome P450 2D6 Homo sapiens AC50 = 63.1 nM PMID[461100]
NPT213 Individual Protein Cytochrome P450 2C19 Homo sapiens AC50 = 5011.87 nM PMID[461100]
NPT109 Individual Protein Cytochrome P450 3A4 Homo sapiens AC50 = 15848.93 nM PMID[461100]
NPT208 Individual Protein Cytochrome P450 1A2 Homo sapiens AC50 = 15848.93 nM PMID[461100]
NPT477 Individual Protein DNA dC->dU-editing enzyme APOBEC-3G Homo sapiens Potency n.a. 33498.3 nM PMID[461100]
NPT444 Individual Protein Ubiquitin carboxyl-terminal hydrolase 1 Homo sapiens Potency n.a. 35481.3 nM PMID[461100]
NPT66 Individual Protein Acetylcholinesterase Electrophorus electricus Inhibition = -8.14 % PMID[461101]
NPT50 Individual Protein Tyrosyl-DNA phosphodiesterase 1 Homo sapiens Potency n.a. 105.9 nM PMID[461100]
NPT50 Individual Protein Tyrosyl-DNA phosphodiesterase 1 Homo sapiens Potency n.a. 149.6 nM PMID[461100]
NPT49 Individual Protein DNA-(apurinic or apyrimidinic site) lyase Homo sapiens Potency n.a. 3548.1 nM PMID[461100]
NPT211 Individual Protein Hypoxia-inducible factor 1 alpha Homo sapiens Inhibition = 94.0 % PMID[461105]
NPT211 Individual Protein Hypoxia-inducible factor 1 alpha Homo sapiens Inhibition = 64.0 % PMID[461105]
NPT1864 Cell Line L5178Y Mus musculus IC50 = 200.0 nM PMID[461110]
NPT439 Individual Protein Butyrylcholinesterase Homo sapiens Inhibition = 14.25 % PMID[461112]
NPT204 Individual Protein Acetylcholinesterase Homo sapiens IC50 = 126700.0 nM PMID[461112]
NPT204 Individual Protein Acetylcholinesterase Homo sapiens Inhibition = 33.52 % PMID[461112]
NPT2410 Cell Line NCI-H1299 Homo sapiens GI = 9.9 % PMID[461113]
NPT2410 Cell Line NCI-H1299 Homo sapiens GI = 28.5 % PMID[461113]
NPT2410 Cell Line NCI-H1299 Homo sapiens GI = 65.3 % PMID[461113]
NPT2410 Cell Line NCI-H1299 Homo sapiens IC50 = 5670.0 nM PMID[461113]
NPT83 Cell Line MCF7 Homo sapiens IC50 = 8170.0 nM PMID[461113]
NPT81 Cell Line A549 Homo sapiens IC50 = 6050.0 nM PMID[461113]
NPT1893 Cell Line MEF Mus musculus Activity = 70.0 % PMID[461115]
NPT2 Others Unspecified IC50 = 220.0 nM PMID[461098]
NPT2 Others Unspecified IC50 = 1750.0 nM PMID[461098]
NPT451 Organism Helicobacter pylori Helicobacter pylori MIC = 0.6 ug.mL-1 PMID[461099]
NPT791 Individual Protein Cruzipain Trypanosoma cruzi Potency = 39810.7 nM PMID[461100]
NPT2 Others Unspecified Potency = 794.3 nM PMID[461100]
NPT2 Others Unspecified Potency n.a. 33173.4 nM PMID[461100]
NPT2 Others Unspecified Potency n.a. 18654.8 nM PMID[461100]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. Potency n.a. 26350.6 nM PMID[461100]
NPT67 Individual Protein Cholinesterase Equus caballus Inhibition = 2.21 % PMID[461101]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. IC50 = 110.0 nM PMID[461102]
NPT1093 Organism Callosobruchus maculatus Callosobruchus maculatus LC50 < 10.0 ppm PMID[461103]
NPT1093 Organism Callosobruchus maculatus Callosobruchus maculatus Ratio = 2.6 n.a. PMID[461103]
NPT1093 Organism Callosobruchus maculatus Callosobruchus maculatus Ratio = 1.4 n.a. PMID[461103]
NPT1093 Organism Callosobruchus maculatus Callosobruchus maculatus Ratio = 0.9 n.a. PMID[461103]
NPT73 Individual Protein Solute carrier organic anion transporter family member 1B1 Homo sapiens Inhibition = 99.89 % PMID[461104]
NPT72 Individual Protein Solute carrier organic anion transporter family member 1B3 Homo sapiens Inhibition = 75.69 % PMID[461104]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. Potency n.a. 21117.7 nM PMID[461100]
NPT2 Others Unspecified Potency n.a. 28183.8 nM PMID[461100]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. Potency n.a. 3.0 nM PMID[461100]
NPT2 Others Unspecified Potency n.a. 891.3 nM PMID[461100]
NPT2 Others Unspecified Potency n.a. 23485.0 nM PMID[461100]
NPT2 Others Unspecified Potency n.a. 8332.8 nM PMID[461100]
NPT2 Others Unspecified Potency n.a. 4176.3 nM PMID[461100]
NPT2 Others Unspecified FC = 5.6 n.a. PMID[461106]
NPT2 Others Unspecified FC = 3.9 n.a. PMID[461106]
NPT2 Others Unspecified FC = 3.5 n.a. PMID[461106]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. IC50 = 1200.0 nM PMID[461106]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. IC50 = 12600.0 nM PMID[461106]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. IC50 > 80000.0 nM PMID[461106]
NPT27 Others Unspecified IC50 > 80000.0 nM PMID[461106]
NPT2264 Protein Family Heat shock protein HSP90 Homo sapiens Inhibition = 94.0 % PMID[461107]
NPT2264 Protein Family Heat shock protein HSP90 Homo sapiens Inhibition = 64.0 % PMID[461107]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. IC50 = 10590.0 nM PMID[461108]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. Ratio = 0.8 n.a. PMID[461109]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. Survival = 0.0 % PMID[461109]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. Survival = 100.0 % PMID[461109]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. Survival = 40.0 % PMID[461109]
NPT20529 NON-MOLECULAR NON-PROTEIN TARGET n.a. Survival = 50.0 % PMID[461109]
NPT22036 CELL-LINE HL Homo sapiens Activity = 21.6 % PMID[461111]
NPT918 Individual Protein Heat shock protein HSP 90-alpha Homo sapiens IC50 = 1630.0 nM PMID[461113]
NPT2264 Protein Family Heat shock protein HSP90 Homo sapiens Inhibition = 64.0 % PMID[461114]
NPT2264 Protein Family Heat shock protein HSP90 Homo sapiens Inhibition = 94.0 % PMID[461114]
NPT2 Others Unspecified IC50 = 10.6 nM PMID[461115]
NPT20555 ORGANISM SARS-CoV-2 Severe acute respiratory syndrome coronavirus 2 IC50 > 20000.0 nM PMID[461116]
NPT20555 ORGANISM SARS-CoV-2 Severe acute respiratory syndrome coronavirus 2 IC50 > 19952.62 nM PMID[461116]

☑ Note for Activity Records:
☉ The quantitative biological activities were primarily integrated from ChEMBL (Version-30) database and were also directly collected from PubMed literature. PubMed PMID was provided as the reference link for each activity record.

  Chemically structural similarity: I. Similar Active Natural Products in NPASS

Top-200 similar NPs were calculated against the active-NP-set (includes 4,3285 NPs with experimentally-derived bioactivity available in NPASS)

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules. Tc lies between [0, 1] where '1' indicates the highest similarity. What is Tanimoto coefficient

●  The left chart: Distribution of similarity level between NPC165549 and all remaining natural products in the NPASS database.
●  The right table: Most similar natural products (Tc>=0.56 or Top200).

Similarity Score Similarity Level Natural Product ID
0.9675 High Similarity NPC298093
0.9618 High Similarity NPC120593
0.9539 High Similarity NPC40033
0.9539 High Similarity NPC166201
0.9494 High Similarity NPC173292
0.9481 High Similarity NPC180340
0.9477 High Similarity NPC128961
0.9477 High Similarity NPC472408
0.9437 High Similarity NPC103307
0.9434 High Similarity NPC8965
0.9419 High Similarity NPC19097
0.9371 High Similarity NPC128293
0.9342 High Similarity NPC238366
0.9281 High Similarity NPC5840
0.9281 High Similarity NPC189270
0.9276 High Similarity NPC10304
0.9276 High Similarity NPC476342
0.9276 High Similarity NPC63256
0.9255 High Similarity NPC152477
0.9255 High Similarity NPC177480
0.9245 High Similarity NPC273959
0.9211 High Similarity NPC470511
0.9211 High Similarity NPC205522
0.9198 High Similarity NPC190351
0.9198 High Similarity NPC74559
0.9187 High Similarity NPC234052
0.9182 High Similarity NPC474150
0.9182 High Similarity NPC83922
0.9182 High Similarity NPC229632
0.9182 High Similarity NPC478199
0.9182 High Similarity NPC472448
0.9182 High Similarity NPC474162
0.9172 High Similarity NPC473272
0.9172 High Similarity NPC476981
0.9172 High Similarity NPC284820
0.9172 High Similarity NPC181960
0.9145 High Similarity NPC40818
0.9145 High Similarity NPC110639
0.9145 High Similarity NPC216314
0.9145 High Similarity NPC195919
0.9145 High Similarity NPC215932
0.9145 High Similarity NPC231013
0.9145 High Similarity NPC14958
0.9145 High Similarity NPC106461
0.9145 High Similarity NPC120924
0.9141 High Similarity NPC121333
0.9136 High Similarity NPC242395
0.913 High Similarity NPC472449
0.9119 High Similarity NPC29876
0.9119 High Similarity NPC134783
0.9119 High Similarity NPC34376
0.9119 High Similarity NPC40037
0.9119 High Similarity NPC167678
0.9103 High Similarity NPC186507
0.9085 High Similarity NPC85233
0.908 High Similarity NPC472276
0.9079 High Similarity NPC471590
0.9079 High Similarity NPC136278
0.9074 High Similarity NPC477154
0.9074 High Similarity NPC117854
0.9074 High Similarity NPC6588
0.9068 High Similarity NPC224280
0.9068 High Similarity NPC475369
0.9068 High Similarity NPC239752
0.9068 High Similarity NPC275780
0.9068 High Similarity NPC472450
0.9068 High Similarity NPC62261
0.9062 High Similarity NPC474033
0.9062 High Similarity NPC474034
0.9062 High Similarity NPC18284
0.9062 High Similarity NPC273021
0.9062 High Similarity NPC261470
0.9062 High Similarity NPC52204
0.9057 High Similarity NPC118256
0.9057 High Similarity NPC204290
0.9057 High Similarity NPC476980
0.9057 High Similarity NPC471976
0.9057 High Similarity NPC475784
0.9057 High Similarity NPC119209
0.9057 High Similarity NPC192686
0.9051 High Similarity NPC78071
0.9045 High Similarity NPC472909
0.9045 High Similarity NPC255807
0.9045 High Similarity NPC31018
0.9045 High Similarity NPC37392
0.9036 High Similarity NPC67302
0.9024 High Similarity NPC475825
0.9024 High Similarity NPC223375
0.902 High Similarity NPC283002
0.902 High Similarity NPC302408
0.9018 High Similarity NPC326877
0.9018 High Similarity NPC288813
0.9013 High Similarity NPC23955
0.9013 High Similarity NPC113089
0.9013 High Similarity NPC182842
0.9013 High Similarity NPC293201
0.9012 High Similarity NPC39091
0.9012 High Similarity NPC272502
0.9006 High Similarity NPC306321
0.9006 High Similarity NPC186686
0.9006 High Similarity NPC303460
0.9006 High Similarity NPC189473
0.9006 High Similarity NPC152659
0.9006 High Similarity NPC236521
0.9006 High Similarity NPC23298
0.9006 High Similarity NPC248638
0.9 High Similarity NPC259456
0.9 High Similarity NPC266314
0.9 High Similarity NPC474187
0.9 High Similarity NPC3629
0.9 High Similarity NPC472632
0.9 High Similarity NPC474186
0.9 High Similarity NPC474038
0.9 High Similarity NPC471210
0.8994 High Similarity NPC187792
0.8994 High Similarity NPC95936
0.8994 High Similarity NPC204879
0.8994 High Similarity NPC473990
0.8994 High Similarity NPC250214
0.8988 High Similarity NPC473883
0.8987 High Similarity NPC303255
0.8987 High Similarity NPC248299
0.8981 High Similarity NPC472915
0.8981 High Similarity NPC280937
0.8976 High Similarity NPC156635
0.897 High Similarity NPC310794
0.8968 High Similarity NPC69752
0.8957 High Similarity NPC243877
0.8957 High Similarity NPC14662
0.8954 High Similarity NPC165512
0.8951 High Similarity NPC50960
0.8951 High Similarity NPC293319
0.8951 High Similarity NPC25361
0.8947 High Similarity NPC70853
0.8947 High Similarity NPC9966
0.8947 High Similarity NPC476054
0.8944 High Similarity NPC220912
0.8944 High Similarity NPC25152
0.8944 High Similarity NPC329760
0.8944 High Similarity NPC194427
0.8944 High Similarity NPC81679
0.8938 High Similarity NPC474287
0.8938 High Similarity NPC477164
0.8938 High Similarity NPC475886
0.8938 High Similarity NPC174953
0.8931 High Similarity NPC472910
0.8931 High Similarity NPC210084
0.8931 High Similarity NPC469584
0.8931 High Similarity NPC291508
0.8931 High Similarity NPC36852
0.8931 High Similarity NPC48208
0.8931 High Similarity NPC472913
0.8931 High Similarity NPC27337
0.8931 High Similarity NPC162869
0.8931 High Similarity NPC99597
0.8931 High Similarity NPC129684
0.8931 High Similarity NPC474836
0.8931 High Similarity NPC471209
0.8931 High Similarity NPC52889
0.8931 High Similarity NPC472914
0.8931 High Similarity NPC472911
0.8931 High Similarity NPC474208
0.8931 High Similarity NPC299520
0.8931 High Similarity NPC165977
0.8931 High Similarity NPC258644
0.8931 High Similarity NPC474681
0.8931 High Similarity NPC96167
0.8931 High Similarity NPC262286
0.8931 High Similarity NPC245758
0.8931 High Similarity NPC156057
0.8931 High Similarity NPC223787
0.8931 High Similarity NPC78225
0.8931 High Similarity NPC217677
0.8931 High Similarity NPC475267
0.8931 High Similarity NPC222814
0.8931 High Similarity NPC218313
0.8924 High Similarity NPC226025
0.8924 High Similarity NPC477530
0.891 High Similarity NPC259058
0.891 High Similarity NPC201547
0.8909 High Similarity NPC475155
0.8903 High Similarity NPC476058
0.8896 High Similarity NPC43319
0.8896 High Similarity NPC170245
0.8896 High Similarity NPC235610
0.8896 High Similarity NPC37870
0.8889 High Similarity NPC197168
0.8889 High Similarity NPC65846
0.8889 High Similarity NPC124038
0.8889 High Similarity NPC146134
0.8889 High Similarity NPC472625
0.8889 High Similarity NPC41301
0.8889 High Similarity NPC59522
0.8882 High Similarity NPC26326
0.8882 High Similarity NPC214919
0.8882 High Similarity NPC124467
0.8882 High Similarity NPC57715
0.8882 High Similarity NPC472275
0.8882 High Similarity NPC471212
0.8882 High Similarity NPC61010

  Chemically structural similarity: II. Similar Clinical/Approved Drugs

Similarity level is defined by Tanimoto coefficient (Tc) between two molecules.

●  The left chart: Distribution of similarity level between NPC165549 and all drugs/candidates.
●  The right table: Most similar clinical/approved drugs (Tc>=0.56 or Top200).

Similarity Score Similarity Level Drug ID Developmental Stage
0.9675 High Similarity NPD5494 Approved
0.8742 High Similarity NPD2801 Approved
0.8742 High Similarity NPD2393 Clinical (unspecified phase)
0.8679 High Similarity NPD1934 Approved
0.8606 High Similarity NPD6168 Clinical (unspecified phase)
0.8606 High Similarity NPD6167 Clinical (unspecified phase)
0.8606 High Similarity NPD6166 Phase 2
0.8553 High Similarity NPD2796 Approved
0.8537 High Similarity NPD1247 Approved
0.8457 Intermediate Similarity NPD3817 Phase 2
0.8452 Intermediate Similarity NPD7054 Approved
0.8452 Intermediate Similarity NPD5844 Phase 1
0.8438 Intermediate Similarity NPD4380 Phase 2
0.8402 Intermediate Similarity NPD7472 Approved
0.8402 Intermediate Similarity NPD7074 Phase 3
0.8293 Intermediate Similarity NPD3882 Suspended
0.8284 Intermediate Similarity NPD3818 Discontinued
0.8282 Intermediate Similarity NPD7096 Clinical (unspecified phase)
0.8282 Intermediate Similarity NPD7819 Suspended
0.8256 Intermediate Similarity NPD7808 Phase 3
0.8256 Intermediate Similarity NPD4338 Clinical (unspecified phase)
0.8246 Intermediate Similarity NPD6797 Phase 2
0.8239 Intermediate Similarity NPD4378 Clinical (unspecified phase)
0.8232 Intermediate Similarity NPD8443 Clinical (unspecified phase)
0.8204 Intermediate Similarity NPD6959 Discontinued
0.8198 Intermediate Similarity NPD7251 Discontinued
0.8193 Intermediate Similarity NPD919 Approved
0.8182 Intermediate Similarity NPD4868 Clinical (unspecified phase)
0.8176 Intermediate Similarity NPD1511 Approved
0.8133 Intermediate Similarity NPD7075 Discontinued
0.8133 Intermediate Similarity NPD4381 Clinical (unspecified phase)
0.8129 Intermediate Similarity NPD7804 Clinical (unspecified phase)
0.8125 Intermediate Similarity NPD7410 Clinical (unspecified phase)
0.8121 Intermediate Similarity NPD5402 Approved
0.8118 Intermediate Similarity NPD7473 Discontinued
0.811 Intermediate Similarity NPD6801 Discontinued
0.8107 Intermediate Similarity NPD3926 Phase 2
0.8089 Intermediate Similarity NPD1549 Phase 2
0.8075 Intermediate Similarity NPD1512 Approved
0.8049 Intermediate Similarity NPD7411 Suspended
0.8047 Intermediate Similarity NPD6232 Discontinued
0.8025 Intermediate Similarity NPD1552 Clinical (unspecified phase)
0.8025 Intermediate Similarity NPD1550 Clinical (unspecified phase)
0.795 Intermediate Similarity NPD6799 Approved
0.7931 Intermediate Similarity NPD7993 Clinical (unspecified phase)
0.7914 Intermediate Similarity NPD920 Approved
0.7898 Intermediate Similarity NPD1510 Phase 2
0.7879 Intermediate Similarity NPD6599 Discontinued
0.7849 Intermediate Similarity NPD7852 Clinical (unspecified phase)
0.7844 Intermediate Similarity NPD1465 Phase 2
0.7805 Intermediate Similarity NPD6980 Clinical (unspecified phase)
0.7791 Intermediate Similarity NPD642 Clinical (unspecified phase)
0.7785 Intermediate Similarity NPD3748 Approved
0.7702 Intermediate Similarity NPD1243 Approved
0.7697 Intermediate Similarity NPD5403 Approved
0.7692 Intermediate Similarity NPD7879 Clinical (unspecified phase)
0.7684 Intermediate Similarity NPD6559 Discontinued
0.7683 Intermediate Similarity NPD5401 Approved
0.768 Intermediate Similarity NPD8397 Clinical (unspecified phase)
0.7669 Intermediate Similarity NPD643 Clinical (unspecified phase)
0.7657 Intermediate Similarity NPD3751 Discontinued
0.7647 Intermediate Similarity NPD7768 Phase 2
0.7643 Intermediate Similarity NPD1240 Approved
0.763 Intermediate Similarity NPD3787 Discontinued
0.7625 Intermediate Similarity NPD2935 Discontinued
0.7602 Intermediate Similarity NPD3749 Approved
0.7595 Intermediate Similarity NPD1933 Approved
0.7562 Intermediate Similarity NPD2799 Discontinued
0.7547 Intermediate Similarity NPD1607 Approved
0.7546 Intermediate Similarity NPD3750 Approved
0.7531 Intermediate Similarity NPD970 Clinical (unspecified phase)
0.7514 Intermediate Similarity NPD8055 Clinical (unspecified phase)
0.75 Intermediate Similarity NPD8312 Approved
0.75 Intermediate Similarity NPD8313 Approved
0.75 Intermediate Similarity NPD7501 Clinical (unspecified phase)
0.75 Intermediate Similarity NPD1547 Clinical (unspecified phase)
0.7486 Intermediate Similarity NPD5242 Approved
0.7485 Intermediate Similarity NPD2800 Approved
0.7485 Intermediate Similarity NPD5353 Approved
0.7485 Intermediate Similarity NPD7421 Clinical (unspecified phase)
0.747 Intermediate Similarity NPD2534 Approved
0.747 Intermediate Similarity NPD2532 Approved
0.747 Intermediate Similarity NPD2533 Approved
0.7469 Intermediate Similarity NPD2346 Discontinued
0.7421 Intermediate Similarity NPD943 Approved
0.7407 Intermediate Similarity NPD6780 Approved
0.7407 Intermediate Similarity NPD6778 Approved
0.7407 Intermediate Similarity NPD6777 Approved
0.7407 Intermediate Similarity NPD6782 Approved
0.7407 Intermediate Similarity NPD6781 Approved
0.7407 Intermediate Similarity NPD6776 Approved
0.7407 Intermediate Similarity NPD6779 Approved
0.7405 Intermediate Similarity NPD2313 Discontinued
0.7396 Intermediate Similarity NPD3226 Approved
0.7382 Intermediate Similarity NPD7697 Approved
0.7382 Intermediate Similarity NPD7696 Phase 3
0.7382 Intermediate Similarity NPD7698 Approved
0.7377 Intermediate Similarity NPD8150 Discontinued
0.7375 Intermediate Similarity NPD447 Suspended
0.7371 Intermediate Similarity NPD7199 Phase 2
0.7368 Intermediate Similarity NPD6844 Discontinued
0.7368 Intermediate Similarity NPD37 Approved
0.736 Intermediate Similarity NPD7228 Approved
0.7348 Intermediate Similarity NPD4419 Clinical (unspecified phase)
0.7348 Intermediate Similarity NPD7549 Discontinued
0.7345 Intermediate Similarity NPD2403 Approved
0.7341 Intermediate Similarity NPD4967 Phase 2
0.7341 Intermediate Similarity NPD4965 Approved
0.7341 Intermediate Similarity NPD4966 Approved
0.7333 Intermediate Similarity NPD4628 Phase 3
0.7326 Intermediate Similarity NPD4363 Phase 3
0.7326 Intermediate Similarity NPD4360 Phase 2
0.7312 Intermediate Similarity NPD1613 Approved
0.7312 Intermediate Similarity NPD1612 Clinical (unspecified phase)
0.7301 Intermediate Similarity NPD6100 Approved
0.7301 Intermediate Similarity NPD6099 Approved
0.7296 Intermediate Similarity NPD6859 Clinical (unspecified phase)
0.7296 Intermediate Similarity NPD4907 Clinical (unspecified phase)
0.7293 Intermediate Similarity NPD7685 Pre-registration
0.7292 Intermediate Similarity NPD7435 Discontinued
0.7288 Intermediate Similarity NPD7184 Clinical (unspecified phase)
0.7283 Intermediate Similarity NPD8434 Phase 2
0.7278 Intermediate Similarity NPD6832 Phase 2
0.7267 Intermediate Similarity NPD1899 Clinical (unspecified phase)
0.7263 Intermediate Similarity NPD8285 Discontinued
0.7261 Intermediate Similarity NPD2798 Approved
0.7257 Intermediate Similarity NPD6234 Discontinued
0.7254 Intermediate Similarity NPD7870 Phase 2
0.7254 Intermediate Similarity NPD7871 Phase 2
0.7239 Intermediate Similarity NPD1509 Clinical (unspecified phase)
0.7238 Intermediate Similarity NPD5953 Discontinued
0.7235 Intermediate Similarity NPD1653 Approved
0.7231 Intermediate Similarity NPD7701 Phase 2
0.7229 Intermediate Similarity NPD6398 Clinical (unspecified phase)
0.7222 Intermediate Similarity NPD7286 Phase 2
0.7209 Intermediate Similarity NPD6385 Approved
0.7209 Intermediate Similarity NPD6386 Approved
0.7208 Intermediate Similarity NPD7783 Phase 2
0.7208 Intermediate Similarity NPD7782 Clinical (unspecified phase)
0.7202 Intermediate Similarity NPD7390 Discontinued
0.7198 Intermediate Similarity NPD7240 Approved
0.7195 Intermediate Similarity NPD1551 Phase 2
0.7194 Intermediate Similarity NPD8151 Discontinued
0.7193 Intermediate Similarity NPD5808 Clinical (unspecified phase)
0.7193 Intermediate Similarity NPD7458 Discontinued
0.717 Intermediate Similarity NPD1529 Clinical (unspecified phase)
0.717 Intermediate Similarity NPD4908 Phase 1
0.716 Intermediate Similarity NPD5123 Clinical (unspecified phase)
0.716 Intermediate Similarity NPD7004 Clinical (unspecified phase)
0.716 Intermediate Similarity NPD5124 Phase 1
0.716 Intermediate Similarity NPD230 Phase 1
0.7152 Intermediate Similarity NPD2344 Approved
0.7151 Intermediate Similarity NPD7784 Clinical (unspecified phase)
0.715 Intermediate Similarity NPD6823 Phase 2
0.7143 Intermediate Similarity NPD6534 Approved
0.7143 Intermediate Similarity NPD5019 Clinical (unspecified phase)
0.7143 Intermediate Similarity NPD6535 Approved
0.7135 Intermediate Similarity NPD7229 Phase 3
0.7126 Intermediate Similarity NPD1878 Clinical (unspecified phase)
0.7126 Intermediate Similarity NPD8455 Phase 2
0.7125 Intermediate Similarity NPD3027 Phase 3
0.7121 Intermediate Similarity NPD7801 Approved
0.712 Intermediate Similarity NPD7700 Phase 2
0.712 Intermediate Similarity NPD7699 Phase 2
0.7117 Intermediate Similarity NPD6651 Approved
0.711 Intermediate Similarity NPD5889 Approved
0.711 Intermediate Similarity NPD5890 Approved
0.711 Intermediate Similarity NPD7615 Clinical (unspecified phase)
0.7107 Intermediate Similarity NPD1530 Clinical (unspecified phase)
0.7101 Intermediate Similarity NPD6143 Clinical (unspecified phase)
0.7092 Intermediate Similarity NPD7584 Approved
0.7089 Intermediate Similarity NPD3266 Approved
0.7089 Intermediate Similarity NPD3267 Approved
0.7083 Intermediate Similarity NPD6190 Approved
0.7079 Intermediate Similarity NPD8127 Discontinued
0.7072 Intermediate Similarity NPD7893 Clinical (unspecified phase)
0.7071 Intermediate Similarity NPD7874 Approved
0.7071 Intermediate Similarity NPD7875 Clinical (unspecified phase)
0.7068 Intermediate Similarity NPD8090 Clinical (unspecified phase)
0.7059 Intermediate Similarity NPD5536 Phase 2
0.7052 Intermediate Similarity NPD6585 Discontinued
0.7048 Intermediate Similarity NPD1471 Phase 3
0.7039 Intermediate Similarity NPD5711 Approved
0.7039 Intermediate Similarity NPD5710 Approved
0.7032 Intermediate Similarity NPD17 Approved
0.703 Intermediate Similarity NPD7033 Discontinued
0.703 Intermediate Similarity NPD651 Clinical (unspecified phase)
0.7006 Intermediate Similarity NPD3972 Approved
0.7006 Intermediate Similarity NPD2424 Discontinued
0.7 Intermediate Similarity NPD2861 Phase 2
0.6994 Remote Similarity NPD4307 Phase 2
0.6989 Remote Similarity NPD5977 Approved
0.6989 Remote Similarity NPD5978 Approved
0.6982 Remote Similarity NPD3887 Approved
0.6982 Remote Similarity NPD2309 Approved
0.6975 Remote Similarity NPD3268 Approved
0.6974 Remote Similarity NPD5006 Approved
0.6974 Remote Similarity NPD5005 Approved
0.6966 Remote Similarity NPD5537 Clinical (unspecified phase)
0.6964 Remote Similarity NPD2654 Approved

  Bioactivity similarity: Similar Natural Products in NPASS

Bioactivity similarity was calculated based on bioactivity descriptors of compounds. The bioactivity descriptors were calculated by a recently developed AI algorithm Chemical Checker (CC) [Nature Biotechnology, 38:1087–1096, 2020; Nature Communications, 12:3932, 2021], which evaluated bioactivity similarities at five levels:
A: chemistry similarity;
B: biological targets similarity;
C: networks similarity;
D: cell-based bioactivity similarity;
E: similarity based on clinical data.

Those 5 categories of CC bioactivity descriptors were calculated and then subjected to manifold projection using UMAP algorithm, to project all NPs on a 2-Dimensional space. The current NP was highlighted with a small circle in the 2-D map. Below figures: left-to-right, A-to-E.

A: chemistry similarity
B: biological targets similarity
C: networks similarity
D: cell-based bioactivity similarity
E: similarity based on clinical data