Organism Name: Rhodopseudomonas palustris [Δshc, ΔcrtB] [CrtB shc DXS DPS UbiA]| Organism ID: | NPO41750 |
| Organism Name: | Rhodopseudomonas palustris [Δshc, ΔcrtB] [CrtB shc DXS DPS UbiA] |
| Native / Engineered Organism: | Engineered Organism |
| Matched Taxonomy Level: | Strain |
| Organism External ID: | NCBI_Taxonomy_ID[ n.a.] |
| Organism Synonyms: | |
| Genus: | Rhodopseudomonas |
| Family: | Bradyrhizobiaceae |
| Kingdom: | n.a. |
| SuperKingdom: | Bacteria |
Individual Natural Products| Natural Product ID | Prefer Name (or InChiKey) | IUPAC Name | Number of Targets | Number of Activity Records |
|---|---|---|---|---|
| NPC215313 | amorpha-4,11-diene | n.a. | 0 | 0 |
NPs produced by Co-culture Organisms (for Co-culture organisms, the full organism list can be found HERE)| Organism Name | Producer Organism | Inducer Organism | NP ID | NP Name | Effect of Co-culture | Reference |
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NPs produced by Engineered Organisms (for Engineered organisms, the full organism list can be found HERE)| Organism Name | Parent Organism Name | Engineered Gene in Organism | Purpose of Engineering | Engineering Category | Engineering Description | NP ID | NP Name | NP Yeild of Parent Organism | NP Yeild of Engineered Organism | Yeild Change | Reference |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Rhodopseudomonas palustris [Δshc, ΔcrtB] | Rhodopseudomonas palustris TIE-1 | CrtB shc DXS DPS UbiA | Increase NP yield | n.a. | crtB gene was deleted to block the carotenoid pathway; hopanoid pathway was blocked by deleting shc gene; co-expression of rate-limiting enzymes (DXS, DPS and UbiA) was combined with the pathway blocking method | NPC215313 | amorphadiene | n.a. | 8·2 mg/g DCW | 2.9 times higher |
PMID[33783839] |
| Rhodopseudomonas palustris [Δshc, ΔcrtB] | Rhodopseudomonas palustris [Δshc] | CrtB shc DXS DPS UbiA | Increase NP yield | n.a. | crtB gene was deleted to block the carotenoid pathway; hopanoid pathway was blocked by deleting shc gene; co-expression of rate-limiting enzymes (DXS, DPS and UbiA) was combined with the pathway blocking method | NPC215313 | amorphadiene | n.a. | 8·2 mg/g DCW | 2.9 times higher |
PMID[33783839] |
The Quantitative Compositions of NPs in Organism| Organism ID | NP ID | Organism Material Preparation | Organism Part | NP Quantity (Standard) | NP Quantity (Minimum) | NP Quantity (Maximum) | Quantity Unit | Reference |
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